A local transcriptome assembler for SNPs, indels and AS events

Workflows : KisSplice post-treatments

kissDE identifies differentially expressed variants.

KisSplice2refgenome returns the list of KisSplice events mapped on a reference genome, it allows to classify the types of alternative transcripts present in data and to get more information about them.

KisSplice2refTranscriptome returns the list of KisSplice SNPs mapped on a reference transcriptome, it also predict the functional impact of the SNP (non-coding, synonymous, non-synonymous) and can take into account the results of kissDE.