A local transcriptome assembler for SNPs, indels and AS events

Brief introduction to KisSplice

Introductory slides pdf

KisSplice Docker

KisSplice, KisSPlice2RefGenome and kissDE are also available through a Docker container named kissplice-pipeline. To pull the docker image, use:

docker pull dwishsan/kissplice-pipeline

The training dataset contains command lines to use with or without docker.

I would like the training on:

The SKNSH dataset
The TALS LCL dataset