#Gene_Id	Gene_name	Chromosome_and_genomic_position	Strand	Event_type	Variable_part_length	Frameshift_?	CDS_?	Gene_biotype	number_of_known_splice_sites/number_of_SNPs	genomic_blocs_size_(upper_path)	genomic_position_of_each_splice_site_(upper_path)/of_each_SNP	paralogs_?	Complex_event_?	snp_in_variable_region	Event_name	blocs_size_(lower_path)	genomic_position_of_each_splice_site_(lower_path)	Psi_for_each_replicate	Read_coverage(upper_path)	Read_coverage(lower_path)	Canonical_sites?
ENSG00000077458	FAM76B	chr11:95504127-95504191	-	deletion	3	No	-	protein_coding	no_known_ss	64	95504127	No	No	No	bcc_994|Cycle_0|Type_1	30,31	95504157,95504161	psi1:0,psi2:1.0	C1_0,C2_11	C1_4,C2_0	-
ENSG00000116062	MSH6	chr2:48010601-48018096	+	altD	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):48010632,48018066	34,31	48010635,48018066	No	No	No	bcc_80159|Cycle_0|Type_1	31,31	48010632,48018066	psi1:0,psi2:1.0	C1_0,C2_2	C1_2,C2_0	(GC:48010635,AG:48018066);(GT:48010632,AG:48018066)
ENSG00000068323	TFE3	chrX:48896887-48898012	-	altA	19	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):48897982,48896935	48,31	48896935,48897982	No	Yes	No	bcc_78253|Cycle_1|Type_1	29,31	48896916,48897982	psi1:1.0,psi2:0	C1_11,C2_0	C1_0,C2_1	Yes
ENSG00000166377	ATP9B	chr18:77134070-77137276	+	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,33,30	77134101,77135394,77135426,77137247	No	No	No	bcc_77606|Cycle_0|Type_1	31,30	77134101,77137247	psi1:1.0,psi2:0	C1_12,C2_0	C1_0,C2_6	Yes
ENSG00000068400	GRIPAP1	chrX:48850411-48850474	-	deletion	3	No	-	protein_coding	no_known_ss	63	48850411	No	No	No	bcc_76998|Cycle_0|Type_1	29,31	48850440,48850444	psi1:1.0,psi2:0	C1_5,C2_0	C1_0,C2_2	-
ENSG00000081803	CADPS2	chr7:122028761-122033525	-	ES	120	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,120,31	122028792,122033250,122033369,122033495	No	No	No	bcc_7377|Cycle_0|Type_1	31,31	122028792,122033495	psi1:1.0,psi2:0	C1_35,C2_0	C1_0,C2_12	Yes
ENSG00000243156	MICAL3	chr22:18359824-18360224	-	altAD	9	No	-	protein_coding	no_known_ss	9,58	18359833,18360167	Yes	Yes	No	bcc_69632|Cycle_259|Type_1	36,22	18359860,18360203	psi1:1.0,psi2:0	C1_2,C2_0	C1_0,C2_2	(AG:18360167,GT:18359833);(AG:18360203,GT:18359860)
ENSG00000109320	NFKB1	chr4:103451040-103459040	+	ES	41	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,41,26	103451071,103455002,103455042,103459015	No	Yes	No	bcc_68865|Cycle_3|Type_1	31,26	103451071,103459015	psi1:0,psi2:1.0	C1_0,C2_7	C1_3,C2_0	Yes
ENSG00000109320	NFKB1	chr4:103451040-103455032	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	103451071,103455002	No	Yes	No	bcc_68865|Cycle_1|Type_1	31,28	103451071,103455005	psi1:0,psi2:1.0	C1_0,C2_6	C1_3,C2_0	Yes
ENSG00000137221	TJAP1	chr6:43470056-43471169	+	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,30,31	43470087,43470326,43470355,43471139	No	No	No	bcc_68674|Cycle_0|Type_1	31,31	43470087,43471139	psi1:1.0,psi2:0	C1_8,C2_0	C1_0,C2_4	Yes
ENSG00000124920	MYRF	chr11:61547732-61548458	+	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,81,30	61547762,61548184,61548264,61548429	No	No	No	bcc_62642|Cycle_1|Type_1	30,30	61547762,61548429	psi1:1.0,psi2:0	C1_22,C2_0	C1_0,C2_2	Yes
ENSG00000138794	CASP6	chr4:110618875-110619485	-	altA	20	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):110619456,110618924	49,30	110618924,110619456	No	No	No	bcc_62254|Cycle_0|Type_1	29,30	110618904,110619456	psi1:0,psi2:1.0	C1_0,C2_7	C1_2,C2_0	Yes
ENSG00000164327	RICTOR	chr5:38947515-38949843	-	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,72,30	38947543,38949458,38949529,38949814	No	No	No	bcc_61594|Cycle_0|Type_1	28,30	38947543,38949814	psi1:1.0,psi2:0	C1_8,C2_0	C1_0,C2_4	Yes
ENSG00000177963	RIC8A	chr11:209866-209928	-	deletion	3	No	Yes	protein_coding	no_known_ss	62	209866	No	No	No	bcc_59983|Cycle_0|Type_1	28,31	209894,209898	psi1:0,psi2:1.0	C1_0,C2_9	C1_3,C2_0	-
ENSG00000137817	PARP6	chr15:72535012-72542391	-	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,70,31	72535040,72541586,72541655,72542361	No	No	No	bcc_59508|Cycle_0|Type_1	28,31	72535040,72542361	psi1:1.0,psi2:0	C1_13,C2_0	C1_0,C2_4	Yes
ENSG00000101901	ALG13	chrX:110970048-110970111	-	deletion	3	No	Yes	protein_coding	no_known_ss	63	110970048	No	No	No	bcc_59484|Cycle_0|Type_1	29,31	110970077,110970081	psi1:1.0,psi2:0	C1_10,C2_0	C1_0,C2_2	-
ENSG00000073910	FRY	chr13:32852657-32863800	+	ES	18	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):32863770,32852685,32862021	28,18,31	32852685,32862004,32862021,32863770	No	No	No	bcc_58805|Cycle_0|Type_1	28,31	32852685,32863770	psi1:1.0,psi2:0	C1_13,C2_0	C1_0,C2_5	Yes
PUTATIVE_ENSG00000130560	PUTATIVE_ENSG00000130560	chr9:138836914-138836975	-	deletion	3	No	Yes	-	no_known_ss	61	138836914	No	No	No	bcc_55848|Cycle_0|Type_1	27,31	138836941,138836945	psi1:0,psi2:1.0	C1_0,C2_7	C1_9,C2_0	-
ENSG00000164347	GFM2	chr5:74021821-74021883	+	deletion	6	No	Yes	protein_coding	no_known_ss	62	74021821	No	No	No	bcc_51728|Cycle_0|Type_1	25,31	74021846,74021853	psi1:0,psi2:1.0	C1_0,C2_36	C1_13,C2_0	-
ENSG00000164056	SPRY1	chr4:124324214-124324276	+	deletion	3	No	-	protein_coding	no_known_ss	62	124324214	No	No	No	bcc_51401|Cycle_0|Type_1	28,31	124324242,124324246	psi1:1.0,psi2:0	C1_7,C2_0	C1_0,C2_6	-
ENSG00000130717	UCK1	chr9:134399901-134399965	+	altAD	6	No	-	protein_coding	no_known_ss	32,31	134399933,134399935	No	No	No	bcc_46963|Cycle_0|Type_1	19,38	134399920,134399928	psi1:0,psi2:1.0	C1_0,C2_2	C1_8,C2_0	-;(AA:134399920,GA:134399928)
ENSG00000119408	NEK6	chr9:127114847-127114906	+	deletion	3	No	-	protein_coding	no_known_ss	59	127114847	No	No	No	bcc_44486|Cycle_0|Type_1	25,31	127114872,127114876	psi1:0,psi2:1.0	C1_0,C2_8	C1_6,C2_0	-
ENSG00000182492	BGN	chrX:152774812-152774893	-	deletion	25	Yes	-	protein_coding	no_known_ss	81	152774812	No	No	No	bcc_27400|Cycle_0|Type_1	25,31	152774837,152774863	psi1:1.0,psi2:0	C1_8,C2_0	C1_0,C2_75	-
ENSG00000133816	MICAL2	chr11:12270762-12278361	+	ES	108	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,108,30	12270793,12277190,12277297,12278332	No	Yes	No	bcc_19733|Cycle_16|Type_1	31,30	12270793,12278332	psi1:1.0,psi2:0	C1_51,C2_0	C1_0,C2_4	Yes
ENSG00000177683	THAP5	chr7:108203427-108203492	+	deletion	6	No	-	protein_coding	no_known_ss	65	108203427	No	No	No	bcc_16925|Cycle_0|Type_1	28,31	108203455,108203462	psi1:1.0,psi2:0	C1_26,C2_0	C1_0,C2_35	-
ENSG00000135424	ITGA7	chr12:56081850-56082016	+	IR	105	No	Yes	protein_coding	no_known_ss	166	-	No	No	No	bcc_23535|Cycle_0|Type_1	30,31	56081880,56081986	psi1:0.0625,psi2:1.0	C1_1,C2_81	C1_15,C2_0	(CT:56081880,AC:56081986)
ENSG00000081803	CADPS2	chr7:122114540-122130165	-	ES	9	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,9,31	122114571,122120906,122120914,122130135	No	No	No	bcc_7373|Cycle_0|Type_1	31,31	122114571,122130135	psi1:0.967741935484,psi2:0	C1_30,C2_0	C1_1,C2_17	Yes
ENSG00000108509	CAMTA2	chr17:4872603-4872955	-	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,21,31	4872632,4872795,4872815,4872925	No	No	No	bcc_59081|Cycle_0|Type_1	29,31	4872632,4872925	psi1:0.975609756098,psi2:0	C1_40,C2_0	C1_1,C2_12	Yes
ENSG00000104067	TJP1	chr15:29993863-29996433	-	altD	39	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,68	29993893,29996366	No	Yes	No	bcc_14201|Cycle_0|Type_1	30,29	29993893,29996405	psi1:0.965517241379,psi2:0	C1_28,C2_0	C1_1,C2_8	Yes
ENSG00000175216	CKAP5	chr11:46765786-46766006	+	IR	160	Yes	Yes	protein_coding	no_known_ss	220	-	No	No	No	bcc_19062|Cycle_0|Type_1	29,31	46765815,46765976	psi1:0,psi2:0.920792079208	C1_0,C2_93	C1_85,C2_8	(CT:46765815,AC:46765976)
ENSG00000119139	TJP2	chr9:71863109-71865979	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,111,29	71863140,71864291,71864401,71865951	No	Yes	No	bcc_43562|Cycle_5|Type_1	31,29	71863140,71865951	psi1:0.0425531914894,psi2:0.964285714286	C1_2,C2_27	C1_45,C2_1	Yes
ENSG00000100280	AP1B1	chr22:29735092-29736673	-	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,21,29	29735122,29735743,29735763,29736645	No	No	No	bcc_18191|Cycle_0|Type_1	30,29	29735122,29736645	psi1:0.875,psi2:0	C1_7,C2_0	C1_1,C2_9	Yes
ENSG00000081803	CADPS2	chr7:122047723-122056144	-	ES	9	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,9,30	122047750,122054122,122054130,122056115	No	No	No	bcc_7376|Cycle_0|Type_1	27,30	122047750,122056115	psi1:0.882352941176,psi2:0	C1_15,C2_0	C1_2,C2_15	Yes
ENSG00000117114	LPHN2	chr1:82417795-82421588	+	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,39,28	82417826,82418671,82418709,82421561	No	No	No	bcc_41651|Cycle_0|Type_1	31,28	82417826,82421561	psi1:0.833333333333,psi2:0	C1_5,C2_0	C1_1,C2_11	Yes
ENSG00000121578	B4GALT4	chr3:118949062-118955730	-	ES	83	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	29,83,31	118949091,118953992,118954074,118955700	No	No	No	bcc_67965|Cycle_0|Type_1	29,31	118949091,118955700	psi1:0.875,psi2:0	C1_7,C2_0	C1_1,C2_6	Yes
ENSG00000116991	SIPA1L2	chr1:232539288-232551270	-	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,54,31	232539317,232539871,232539924,232551240	No	No	No	bcc_25344|Cycle_0|Type_1	29,31	232539317,232551240	psi1:0.888888888889,psi2:0	C1_8,C2_0	C1_1,C2_5	Yes
ENSG00000122126	OCRL	chrX:128710500-128721008	+	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,24,30	128710529,128718321,128718344,128720979	No	No	No	bcc_55365|Cycle_0|Type_1	29,30	128710529,128720979	psi1:1.0,psi2:0.181818181818	C1_17,C2_2	C1_0,C2_9	Yes
ENSG00000177200	CHD9	chr16:53338384-53338443	-	deletion	3	No	Yes	protein_coding	no_known_ss	59	53338384	No	No	No	bcc_57702|Cycle_0|Type_1	25,31	53338409,53338413	psi1:1.0,psi2:0.166666666667	C1_7,C2_1	C1_0,C2_5	-
ENSG00000071054	MAP4K4	chr2:102483741-102486114	+	ES	9	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):102483771,102486084,102484499	30,9,31	102483771,102484491,102484499,102486084	No	No	No	bcc_13171|Cycle_0|Type_1	30,31	102483771,102486084	psi1:0.925925925926,psi2:0.0454545454545	C1_50,C2_1	C1_4,C2_21	Yes
ENSG00000144134	RABL2A	chr2:114399014-114399386	+	altD	12	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):114399057,114399358	43,29	114399057,114399358	Yes	Yes	No	bcc_19564|Cycle_0|Type_1	31,29	114399045,114399358	psi1:1.0,psi2:0.166666666667	C1_6,C2_1	C1_0,C2_5	Yes
ENSG00000079974	RABL2B	chr22:51207523-51207895	-	altD	12	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):51207552,51207853	29,43	51207552,51207853	Yes	Yes	No	bcc_19564|Cycle_0|Type_1	29,31	51207552,51207865	psi1:1.0,psi2:0.166666666667	C1_6,C2_1	C1_0,C2_5	Yes
ENSG00000138674	SEC31A	chr4:83750182-83763366	-	ES_altD	84	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	29,39,74	83750211,83752090,83752128,83763293	No	No	No	bcc_35459|Cycle_0|Type_1	29,29	83750211,83763338	psi1:0.25,psi2:1.0	C1_4,C2_70	C1_12,C2_0	Yes
ENSG00000093167	LRRFIP2	chr3:37107405-37116545	-	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,102,31	37107433,37107715,37107816,37116515	No	No	No	bcc_42812|Cycle_0|Type_1	28,31	37107433,37116515	psi1:0.84,psi2:0	C1_21,C2_0	C1_4,C2_21	Yes
ENSG00000107771	CCSER2	chr10:86237389-86273235	+	ES	85	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,85,31	86237420,86259631,86259715,86273205	No	Yes	No	bcc_54529|Cycle_1|Type_1	31,31	86237420,86273205	psi1:0.916666666667,psi2:0	C1_22,C2_0	C1_2,C2_6	Yes
ENSG00000112511	PHF1	chr6:33382575-33383064	+	altA	26	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,53	33382606,33383012	No	No	No	bcc_58332|Cycle_0|Type_1	31,27	33382606,33383038	psi1:1.0,psi2:0.2	C1_6,C2_1	C1_0,C2_4	Yes
ENSG00000175224	ATG13	chr11:46681006-46686959	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,111,27	46681035,46686399,46686509,46686933	No	No	No	bcc_1563|Cycle_0|Type_1	29,27	46681035,46686933	psi1:0.875,psi2:0.047619047619	C1_21,C2_1	C1_3,C2_20	Yes
ENSG00000088387	DOCK9	chr13:99460032-99461635	-	ES_MULTI	42	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,36,6,30	99460061,99460894,99460929,99461377,99461382,99461606	No	Yes	No	bcc_20973|Cycle_2|Type_1	29,30	99460061,99461606	psi1:0.909090909091,psi2:0	C1_10,C2_0	C1_1,C2_3	Yes
ENSG00000088387	DOCK9	chr13:99460032-99461636	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,36,31	99460061,99460894,99460929,99461606	No	Yes	No	bcc_20973|Cycle_3|Type_1	29,31	99460061,99461606	psi1:0.9,psi2:0	C1_9,C2_0	C1_1,C2_3	Yes
ENSG00000128563	PRKRIP1	chr7:102016739-102040024	+	ES	79	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,79,30	102016769,102038067,102038145,102039995	No	Yes	No	bcc_816|Cycle_9|Type_1	30,30	102016769,102039995	psi1:0.181818181818,psi2:1.0	C1_2,C2_9	C1_9,C2_0	Yes
ENSG00000228509	AC006460.2	chr2:191556812-191556876	+	deletion	6	No	-	antisense	no_known_ss	64	191556812	No	No	No	bcc_51120|Cycle_0|Type_1	27,31	191556839,191556846	psi1:0.25,psi2:1.0	C1_4,C2_30	C1_12,C2_0	-
ENSG00000065613	SLK	chr10:105768084-105777946	+	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,93,29	105768114,105770574,105770666,105777918	No	No	No	bcc_15897|Cycle_0|Type_1	30,29	105768114,105777918	psi1:0.0714285714286,psi2:0.923076923077	C1_3,C2_12	C1_39,C2_1	Yes
ENSG00000130338	TULP4	chr6:158930876-158930943	+	deletion	8	Yes	-	protein_coding	no_known_ss	67	158930876	No	No	No	bcc_14528|Cycle_0|Type_1	28,31	158930904,158930913	psi1:0.875,psi2:0	C1_7,C2_0	C1_1,C2_3	-
ENSG00000081803	CADPS2	chr7:122056189-122078425	-	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,21,31	122056218,122076414,122076434,122078395	No	Yes	Yes	bcc_7375|Cycle_0|Type_1	29,31	122056218,122078395	psi1:0.9,psi2:0.0833333333333	C1_18,C2_1	C1_2,C2_11	Yes
ENSG00000196776	CD47	chr3:107766111-107770791	-	ES	33	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	28,33,25,6	107766139,107768466,107768498,107769425,107769449,107770786	No	Yes	No	bcc_1040|Cycle_4|Type_1	28,25,6	107766139,107769425,107769449,107770786	psi1:1.0,psi2:0.212121212121	C1_32,C2_7	C1_0,C2_26	Yes
ENSG00000090686	USP48	chr1:22005916-22013714	-	unclassified	15	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):22013684,22005932,22007301,22007327	16,27,31	22005932,22007301,22007327,22013684	No	No	No	bcc_52100|Cycle_0|Type_1	16,12,31	22005932,22007301,22007312,22013684	psi1:1.0,psi2:0.333333333333	C1_30,C2_1	C1_0,C2_2	Yes
ENSG00000233927	RPS28	chr19:8387591-8387658	+	deletion	8	Yes	-	protein_coding	no_known_ss	67	8387591	No	No	No	bcc_79689|Cycle_0|Type_1	31,28	8387622,8387631	psi1:1.0,psi2:0.25	C1_6,C2_1	C1_0,C2_3	-
ENSG00000167601	AXL	chr19:41745188-41748817	+	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,30	41745219,41745599,41745625,41748788	No	No	No	bcc_30140|Cycle_0|Type_1	31,30	41745219,41748788	psi1:0.75,psi2:0	C1_3,C2_0	C1_1,C2_6	Yes
ENSG00000133256	PDE6B	chr4:660372-663862	+	ES	151	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,151,28	660403,661645,661795,663835	No	No	No	bcc_28856|Cycle_0|Type_1	31,28	660403,663835	psi1:1.0,psi2:0.333333333333	C1_23,C2_1	C1_0,C2_2	(GC:660403,AG:661645);(GT:661795,AG:663835);(GC:660403,AG:663835)
ENSG00000138768	USO1	chr4:76715025-76720804	+	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,21,30	76715054,76716489,76716509,76720775	No	No	No	bcc_44329|Cycle_0|Type_1	29,30	76715054,76720775	psi1:0.142857142857,psi2:0.941176470588	C1_1,C2_16	C1_6,C2_1	Yes
ENSG00000122033	MTIF3	chr13:28014555-28019255	-	ES	61	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,61,31	28014586,28015154,28015214,28019225	No	No	No	bcc_44929|Cycle_0|Type_1	31,31	28014586,28019225	psi1:0.777777777778,psi2:0	C1_14,C2_0	C1_4,C2_18	Yes
ENSG00000126012	KDM5C	chrX:53246426-53247008	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	53246459,53246978	No	No	No	bcc_64306|Cycle_0|Type_1	30,31	53246456,53246978	psi1:1.0,psi2:0.333333333333	C1_20,C2_1	C1_0,C2_2	Yes
ENSG00000204843	DCTN1	chr2:74598825-74604588	-	ES_MULTI	60	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	30,21,18,21,30	74598855,74600055,74600075,74601450,74601467,74603869,74603889,74604559	No	Yes	No	bcc_15459|Cycle_0|Type_1	30,30	74598855,74604559	psi1:0.952380952381,psi2:0	C1_40,C2_0	C1_2,C2_4	Yes
ENSG00000102038	SMARCA1	chrX:128626040-128630755	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,36,29	128626070,128627017,128627052,128630727	No	No	No	bcc_33307|Cycle_0|Type_1	30,29	128626070,128630727	psi1:0.166666666667,psi2:0.947368421053	C1_2,C2_18	C1_10,C2_1	Yes
ENSG00000185596	WASH3P	chr15:102506396-102512828	+	altA	13	Yes	-	pseudogene	all_splice_sites_known_(3_ss)	30,43	102506426,102512786	Yes	Yes	No	bcc_28878|Cycle_1|Type_1	30,30	102506426,102512799	psi1:0.2,psi2:1.0	C1_4,C2_15	C1_16,C2_0	Yes
ENSG00000227232	WASH7P	chr1:18336-24767	-	altA	13	Yes	-	pseudogene	all_splice_sites_known_(3_ss)	43,30	18379,24738	Yes	Yes	No	bcc_28878|Cycle_1|Type_1	30,30	18366,24738	psi1:0.2,psi2:1.0	C1_4,C2_15	C1_16,C2_0	Yes
ENSG00000147010	SH3KBP1	chrX:19702116-19713759	-	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,75,30	19702146,19705735,19705809,19713730	No	No	No	bcc_32664|Cycle_0|Type_1	30,30	19702146,19713730	psi1:0.882352941176,psi2:0	C1_15,C2_0	C1_2,C2_5	Yes
ENSG00000059378	PARP12	chr7:139728458-139737544	-	ES	97	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,97,30	139728488,139734035,139734131,139737515	No	No	No	bcc_64865|Cycle_0|Type_1	30,30	139728488,139737515	psi1:0.333333333333,psi2:1.0	C1_1,C2_17	C1_2,C2_0	Yes
ENSG00000112893	MAN2A1	chr5:109183460-109190871	+	ES	59	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):109190841,109183491	31,59,31	109183491,109187251,109187309,109190841	No	No	No	bcc_16793|Cycle_0|Type_1	31,31	109183491,109190841	psi1:0.7,psi2:0	C1_7,C2_0	C1_3,C2_26	Yes
ENSG00000219626,ENSG00000266118	FAM228B,RP11-507M3.1	chr2:24358027-24369645	+	ES	81	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,81,28	24358057,24362240,24362320,24369618	No	Yes	No	bcc_2779|Cycle_2|Type_1	30,28	24358057,24369618	psi1:0.941176470588,psi2:0	C1_16,C2_0	C1_1,C2_2	Yes
ENSG00000138326	RPS24	chr10:79797033-79800379	+	unclassified	15	No	Yes	protein_coding	6_ss_annotated_(over_8_ss):79797062,79797740,79799983,79800373,79799962,79797723	29,18,22,7	79797062,79797723,79797740,79799962,79799983,79800373	No	Yes	No	bcc_24161|Cycle_2|Type_1	29,7,18,7	79797062,79797723,79797729,79799966,79799983,79800373	psi1:0.773480662983,psi2:0	C1_140,C2_0	C1_41,C2_173	Yes
ENSG00000182473	EXOC7	chr17:74082197-74083765	-	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,39,31	74082226,74082935,74082973,74083735	No	No	No	bcc_52713|Cycle_0|Type_1	29,31	74082226,74083735	psi1:0.714285714286,psi2:0	C1_5,C2_0	C1_2,C2_14	Yes
ENSG00000170581	STAT2	chr12:56742815-56742977	-	IR	103	Yes	Yes	protein_coding	no_known_ss	162	-	No	No	No	bcc_14483|Cycle_0|Type_1	28,31	56742843,56742947	psi1:0.84,psi2:0.047619047619	C1_21,C2_1	C1_4,C2_20	Yes
ENSG00000004455	AK2	chr1:33490142-33502367	-	ES	118	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	26,118,31	33490168,33497145,33497262,33502337	No	No	No	bcc_11066|Cycle_0|Type_1	26,31	33490168,33502337	psi1:0.894736842105,psi2:0.0851063829787	C1_17,C2_4	C1_2,C2_43	Yes
ENSG00000136754	ABI1	chr10:27059247-27066024	-	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,15,31	27059274,27060004,27060018,27065994	No	No	No	bcc_35434|Cycle_0|Type_1	27,31	27059274,27065994	psi1:0.965517241379,psi2:0.2	C1_56,C2_3	C1_2,C2_12	Yes
ENSG00000072110	ACTN1	chr14:69343927-69345736	-	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,66,31	69343957,69345175,69345240,69345706	No	Yes	No	bcc_18088|Cycle_0|Type_1	30,31	69343957,69345706	psi1:0.941176470588,psi2:0.137931034483	C1_16,C2_4	C1_1,C2_25	Yes
ENSG00000087470	DNM1L	chr12:32890064-32893028	+	ES_MULTI	111	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,78,33,31	32890095,32890799,32890876,32891198,32891230,32892998	No	Yes	No	bcc_11731|Cycle_1|Type_1	31,31	32890095,32892998	psi1:0.969230769231,psi2:0.214285714286	C1_63,C2_3	C1_2,C2_11	Yes
ENSG00000145349	CAMK2D	chr4:114421639-114430824	-	ES_MULTI	102	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	28,42,60,31	114421667,114424092,114424133,114426132,114426191,114430794	No	Yes	No	bcc_10665|Cycle_1|Type_1	28,31	114421667,114430794	psi1:0.904761904762,psi2:0	C1_57,C2_0	C1_6,C2_12	Yes
ENSG00000152894	PTPRK	chr6:128313826-128316637	-	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,18,31	128313854,128316394,128316411,128316607	No	No	No	bcc_40445|Cycle_0|Type_1	28,31	128313854,128316607	psi1:0.8,psi2:0	C1_16,C2_0	C1_4,C2_12	Yes
ENSG00000091157	WDR7	chr18:54426153-54446689	+	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,99,28	54426184,54444013,54444111,54446662	No	No	No	bcc_57704|Cycle_0|Type_1	31,28	54426184,54446662	psi1:0.888888888889,psi2:0	C1_16,C2_0	C1_2,C2_4	Yes
ENSG00000087470	DNM1L	chr12:32890064-32893024	+	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,78,27	32890095,32890799,32890876,32892998	No	Yes	No	bcc_11731|Cycle_6|Type_1	31,27	32890095,32892998	psi1:0.960784313725,psi2:0.214285714286	C1_49,C2_3	C1_2,C2_11	Yes
ENSG00000127603	MACF1	chr1:39945650-39950301	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,111,29	39945681,39946592,39946702,39950273	No	No	No	bcc_16570|Cycle_0|Type_1	31,29	39945681,39950273	psi1:0.075,psi2:0.828571428571	C1_3,C2_29	C1_37,C2_6	Yes
ENSG00000204843	DCTN1	chr2:74590524-74592232	-	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,15,31	74590554,74590741,74590755,74592202	No	No	No	bcc_15463|Cycle_0|Type_1	30,31	74590554,74592202	psi1:0.905405405405,psi2:0	C1_67,C2_0	C1_7,C2_12	Yes
ENSG00000137486	ARRB1	chr11:74979973-74983968	-	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,24,30	74980003,74982745,74982768,74983939	No	No	No	bcc_66135|Cycle_0|Type_1	30,30	74980003,74983939	psi1:0.954545454545,psi2:0.2	C1_21,C2_1	C1_1,C2_4	Yes
ENSG00000139116	KIF21A	chr12:39720097-39724577	-	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,21,30	39720126,39724044,39724064,39724548	No	No	No	bcc_28643|Cycle_0|Type_1	29,30	39720126,39724548	psi1:0.903225806452,psi2:0	C1_28,C2_0	C1_3,C2_5	Yes
ENSG00000204843	DCTN1	chr2:74598825-74604589	-	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,21,31	74598855,74600055,74600075,74604559	No	Yes	No	bcc_15459|Cycle_1|Type_1	30,31	74598855,74604559	psi1:0.846153846154,psi2:0	C1_11,C2_0	C1_2,C2_4	Yes
ENSG00000145216	FIP1L1	chr4:54294321-54308849	+	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,27,30	54294350,54306749,54306775,54308820	No	Yes	No	bcc_13984|Cycle_1|Type_1	29,30	54294350,54308820	psi1:1.0,psi2:0.333333333333	C1_22,C2_4	C1_0,C2_8	Yes
ENSG00000163681	SLMAP	chr3:57850553-57875798	+	ES_MULTI	114	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,51,63,31	57850584,57850969,57851019,57857363,57857425,57875768	No	Yes	No	bcc_61862|Cycle_2|Type_1	31,31	57850584,57875768	psi1:1.0,psi2:0.4	C1_25,C2_2	C1_0,C2_3	Yes
ENSG00000023516	AKAP11	chr13:42882715-42888058	+	ES	84	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,84,29	42882745,42887183,42887266,42888030	No	No	No	bcc_2111|Cycle_0|Type_1	30,29	42882745,42888030	psi1:0.990476190476,psi2:0.25	C1_104,C2_1	C1_1,C2_3	Yes
ENSG00000142453	CARM1	chr19:11031772-11032319	+	ES	69	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,69,29	11031803,11032051,11032119,11032291	No	No	No	bcc_47347|Cycle_2|Type_1	31,29	11031803,11032291	psi1:1.0,psi2:0.285714285714	C1_13,C2_4	C1_0,C2_10	Yes
ENSG00000162959,ENSG00000162961	MEMO1,DPY30	chr2:32094991-32143024	-	ES	77	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,77,30	32095021,32108455,32108531,32142995	No	Yes	No	bcc_49522|Cycle_3|Type_1	30,30	32095021,32142995	psi1:0.4,psi2:1.0	C1_4,C2_36	C1_6,C2_0	Yes
ENSG00000196943	NOP9	chr14:24776693-24777052	+	IR	302	Yes	Yes	protein_coding	no_known_ss	359	-	No	No	No	bcc_421|Cycle_0|Type_1	28,29	24776721,24777024	psi1:1.0,psi2:0.144104803493	C1_56,C2_33	C1_0,C2_196	(CT:24776721,AC:24777024)
ENSG00000063245	EPN1	chr19:56200329-56201261	+	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,75,29	56200360,56200663,56200737,56201233	No	No	No	bcc_58664|Cycle_0|Type_1	31,29	56200360,56201233	psi1:0.346153846154,psi2:1.0	C1_9,C2_42	C1_17,C2_0	Yes
ENSG00000243156	MICAL3	chr22:18359824-18359993	-	altAD	9	No	-	protein_coding	no_known_ss	36,34	18359860,18359960	Yes	Yes	No	bcc_69632|Cycle_7075|Type_1	9,52	18359833,18359942	psi1:0.2,psi2:1.0	C1_1,C2_2	C1_4,C2_0	(AG:18359960,GT:18359860);(AG:18359942,GT:18359833)
ENSG00000137177	KIF13A	chr6:17788078-17794510	-	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,39,31	17788106,17790103,17790141,17794480	No	No	No	bcc_60987|Cycle_0|Type_1	28,31	17788106,17794480	psi1:0.333333333333,psi2:1.0	C1_2,C2_8	C1_4,C2_0	Yes
ENSG00000111667	USP5	chr12:6972441-6973024	+	altD	69	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	100,31	6972541,6972994	No	No	No	bcc_42163|Cycle_0|Type_1	31,31	6972472,6972994	psi1:0.971428571429,psi2:0.3	C1_34,C2_3	C1_1,C2_7	Yes
ENSG00000106771	TMEM245	chr9:111843195-111849483	-	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,24,31	111843223,111848277,111848300,111849453	No	No	No	bcc_27905|Cycle_0|Type_1	28,31	111843223,111849453	psi1:0.85,psi2:0	C1_17,C2_0	C1_3,C2_5	Yes
ENSG00000125246	CLYBL	chr13:100511272-100517101	+	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,102,30	100511303,100515245,100515346,100517072	No	No	No	bcc_48363|Cycle_0|Type_1	31,30	100511303,100517072	psi1:0.4,psi2:1.0	C1_4,C2_29	C1_6,C2_0	Yes
ENSG00000134851	TMEM165	chr4:56284122-56290733	+	altD	179	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	209,29	56284331,56290705	No	No	No	bcc_35733|Cycle_0|Type_1	30,29	56284152,56290705	psi1:0.847619047619,psi2:0	C1_89,C2_0	C1_16,C2_26	Yes
ENSG00000036054	TBC1D23	chr3:100029355-100034971	+	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,29	100029386,100030677,100030721,100034943	No	No	No	bcc_37608|Cycle_0|Type_1	31,29	100029386,100034943	psi1:0.875,psi2:0.153846153846	C1_14,C2_2	C1_2,C2_11	Yes
ENSG00000182979	MTA1	chr14:105933049-105935832	+	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,12,29	105933079,105934675,105934686,105935804	No	No	No	bcc_80193|Cycle_0|Type_1	30,29	105933079,105935804	psi1:0.777777777778,psi2:0	C1_7,C2_0	C1_2,C2_4	Yes
ENSG00000100104	SRRD	chr22:26889662-26889727	-	deletion	3	No	-	protein_coding	no_known_ss	65	26889662	No	No	No	bcc_55727|Cycle_1|Type_1	31,31	26889693,26889697	psi1:0.333333333333,psi2:1.0	C1_2,C2_7	C1_4,C2_0	-
ENSG00000008513	ST3GAL1	chr8:134488288-134488550	+	IR	203	Yes	-	protein_coding	no_known_ss	262	-	No	Yes	Yes	bcc_63749|Cycle_5|Type_1	29,30	134488317,134488521	psi1:0.285714285714,psi2:0.962962962963	C1_2,C2_26	C1_5,C2_1	(CT:134488317,AC:134488521)
ENSG00000158122	AAED1	chr9:99404140-99413701	-	ES	132	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,132,30	99404168,99408175,99408306,99413672	No	No	No	bcc_15414|Cycle_1|Type_1	28,30	99404168,99413672	psi1:0,psi2:0.823529411765	C1_0,C2_14	C1_5,C2_3	Yes
ENSG00000197694	SPTAN1	chr9:131371532-131374022	+	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,15,30	131371563,131371930,131371944,131373993	No	No	No	bcc_46323|Cycle_0|Type_1	31,30	131371563,131373993	psi1:0.984042553191,psi2:0.3125	C1_185,C2_5	C1_3,C2_11	Yes
ENSG00000107758	PPP3CB	chr10:75198148-75204512	-	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,30,30	75198178,75199630,75199659,75204483	No	No	No	bcc_11867|Cycle_0|Type_1	30,30	75198178,75204483	psi1:0.988826815642,psi2:0.333333333333	C1_177,C2_4	C1_2,C2_8	Yes
ENSG00000133961	NUMB	chr14:73763962-73789868	-	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,33,31	73763993,73783098,73783130,73789838	No	No	No	bcc_40026|Cycle_0|Type_1	31,31	73763993,73789838	psi1:0.1875,psi2:1.0	C1_3,C2_5	C1_13,C2_0	Yes
PUTATIVE_ENSG00000100906	PUTATIVE_ENSG00000100906	chr14:35871109-35871169	-	deletion	3	No	-	-	no_known_ss	60	35871109	No	Yes	No	bcc_35901|Cycle_13|Type_1	26,31	35871135,35871139	psi1:0.375,psi2:1.0	C1_21,C2_91	C1_35,C2_0	-
ENSG00000162613	FUBP1	chr1:78433858-78435637	-	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,63,29	78433887,78434706,78434768,78435609	No	No	No	bcc_26060|Cycle_0|Type_1	29,29	78433887,78435609	psi1:0.846153846154,psi2:0	C1_22,C2_0	C1_4,C2_6	(GC:78434706,CT:78433887);(AC:78435609,CT:78433887);(AC:78435609,CT:78434768)
ENSG00000127952	STYXL1	chr7:75659815-75677160	-	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	30,31	75659845,75677130	No	No	No	bcc_50808|Cycle_0|Type_1	27,31	75659842,75677130	psi1:0.125,psi2:0.833333333333	C1_1,C2_5	C1_7,C2_1	Yes
ENSG00000076554	TPD52	chr8:80954872-80963791	-	ES_MULTI	69	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,42,27,30	80954903,80956402,80956443,80962680,80962706,80963762	No	No	No	bcc_43662|Cycle_0|Type_1	31,30	80954903,80963762	psi1:0.825396825397,psi2:0	C1_104,C2_0	C1_22,C2_34	Yes
ENSG00000160917	CPSF4	chr7:99050034-99051692	+	altA	75	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,104	99050063,99051589	No	No	No	bcc_59222|Cycle_0|Type_1	29,29	99050063,99051664	psi1:1.0,psi2:0.333333333333	C1_9,C2_3	C1_0,C2_6	Yes
ENSG00000145439	CBR4	chr4:169911450-169923252	-	ES	84	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):169923222,169911479	29,84,31	169911479,169919353,169919436,169923222	No	No	No	bcc_31495|Cycle_0|Type_1	29,31	169911479,169923222	psi1:0.24,psi2:0.931034482759	C1_6,C2_27	C1_19,C2_2	Yes
ENSG00000133816	MICAL2	chr11:12261104-12278361	+	ES_MULTI	741	No	Yes	protein_coding	all_splice_sites_known_(14_ss)	28,123,219,102,126,63,108,30	12261132,12262587,12262709,12263761,12263979,12264218,12264319,12265534,12265659,12270731,12270793,12277190,12277297,12278332	No	Yes	Yes	bcc_19733|Cycle_3|Type_1	28,30	12261132,12278332	psi1:0.996282527881,psi2:0	C1_268,C2_0	C1_1,C2_1	Yes
ENSG00000133816	MICAL2	chr11:12261104-12278361	+	ES_MULTI	678	No	Yes	protein_coding	all_splice_sites_known_(12_ss)	28,123,219,102,126,108,30	12261132,12262587,12262709,12263761,12263979,12264218,12264319,12265534,12265659,12277190,12277297,12278332	No	Yes	Yes	bcc_19733|Cycle_2|Type_1	28,30	12261132,12278332	psi1:0.995951417004,psi2:0	C1_246,C2_0	C1_1,C2_1	Yes
ENSG00000196943	NOP9	chr14:24775313-24775610	+	IR	236	Yes	Yes	protein_coding	no_known_ss	297	-	No	No	No	bcc_420|Cycle_0|Type_1	30,31	24775343,24775580	psi1:0.978723404255,psi2:0.150753768844	C1_46,C2_30	C1_1,C2_169	(CT:24775343,AC:24775580)
ENSG00000148634	HERC4	chr10:69716703-69726470	-	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,24,31	69716733,69718870,69718893,69726440	No	No	No	bcc_39429|Cycle_0|Type_1	30,31	69716733,69726440	psi1:0.933333333333,psi2:0.25	C1_14,C2_3	C1_1,C2_9	Yes
ENSG00000110921	MVK	chr12:110013919-110023856	+	ES	145	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,145,30	110013950,110017607,110017751,110023827	No	Yes	No	bcc_62477|Cycle_1|Type_1	31,30	110013950,110023827	psi1:0.333333333333,psi2:0.972972972973	C1_7,C2_36	C1_14,C2_1	Yes
ENSG00000006459	KDM7A	chr7:139785370-139785434	-	deletion	3	No	-	protein_coding	no_known_ss	64	139785370	No	No	No	bcc_52313|Cycle_0|Type_1	30,31	139785400,139785404	psi1:0.4,psi2:1.0	C1_2,C2_8	C1_3,C2_0	-
ENSG00000147601	TERF1	chr8:73939256-73944305	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,60,29	73939287,73942571,73942630,73944277	Yes	No	No	bcc_34322|Cycle_0|Type_1	31,29	73939287,73944277	psi1:0.978723404255,psi2:0.375	C1_46,C2_6	C1_1,C2_10	Yes
ENSG00000130779	CLIP1	chr12:122758679-122762731	-	ES	6	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):122762701,122760986,122758709	30,6,31	122758709,122760986,122760991,122762701	No	No	No	bcc_38694|Cycle_0|Type_1	30,31	122758709,122762701	psi1:0.755555555556,psi2:0	C1_34,C2_0	C1_11,C2_19	Yes
ENSG00000175203	DCTN2	chr12:57929598-57939838	-	ES	6	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,6,28	57929628,57932302,57932307,57939811	No	No	No	bcc_43778|Cycle_0|Type_1	30,28	57929628,57939811	psi1:0.893939393939,psi2:0.157894736842	C1_59,C2_3	C1_7,C2_16	Yes
ENSG00000100209	HSCB	chr22:29138289-29147258	+	ES_MULTI	192	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,97,95,30	29138319,29139870,29139966,29140603,29140697,29147229	No	Yes	No	bcc_9057|Cycle_1|Type_1	30,30	29138319,29147229	psi1:0.461538461538,psi2:1.0	C1_6,C2_46	C1_7,C2_0	Yes
ENSG00000150787	PTS	chr11:112099365-112101377	+	ES	23	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,23,29	112099396,112100931,112100953,112101349	No	No	No	bcc_47807|Cycle_0|Type_1	31,29	112099396,112101349	psi1:0.25,psi2:0.925925925926	C1_8,C2_75	C1_24,C2_6	Yes
ENSG00000010219	DYRK4	chr12:4714221-4719350	+	ES	61	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,61,30	4714252,4716493,4716553,4719321	No	No	No	bcc_54050|Cycle_0|Type_1	31,30	4714252,4719321	psi1:0.4,psi2:1.0	C1_4,C2_15	C1_6,C2_0	Yes
ENSG00000166685	COG1	chr17:71203364-71204482	+	ES	38	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,38,30	71203395,71203841,71203878,71204453	No	No	No	bcc_32306|Cycle_0|Type_1	31,30	71203395,71204453	psi1:0.6,psi2:0	C1_12,C2_0	C1_8,C2_30	Yes
ENSG00000168172	HOOK3	chr8:42852749-42857279	+	ES	6	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,6,30	42852780,42855414,42855419,42857250	No	No	No	bcc_59616|Cycle_0|Type_1	31,30	42852780,42857250	psi1:0.75,psi2:0	C1_9,C2_0	C1_3,C2_5	Yes
ENSG00000132842	AP3B1	chr5:77298850-77311264	-	ES	36	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):77311234,77298879	29,36,31	77298879,77299283,77299318,77311234	No	No	No	bcc_54105|Cycle_0|Type_1	29,31	77298879,77311234	psi1:0.75,psi2:0.0714285714286	C1_12,C2_1	C1_4,C2_13	Yes
ENSG00000147853	AK3	chr9:4713954-4714080	+	altD	28	Yes	-	protein_coding	no_known_ss	57,27	4714011,4714054	Yes	Yes	No	bcc_75224|Cycle_450|Type_1	29,27	4713983,4714054	psi1:0.4,psi2:1.0	C1_2,C2_7	C1_3,C2_0	(CT:4713983,AC:4714054);(CT:4714011,AC:4714054)
ENSG00000198707	CEP290	chr12:88447494-88449379	-	ES	74	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,74,27	88447523,88448117,88448190,88449353	No	No	No	bcc_58573|Cycle_0|Type_1	29,27	88447523,88449353	psi1:1.0,psi2:0.428571428571	C1_13,C2_3	C1_0,C2_4	Yes
ENSG00000008128	CDK11A	chr1:1647889-1650826	-	altD	30	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,60	1647917,1650767	No	Yes	Yes	bcc_16624|Cycle_0|Type_1	28,30	1647917,1650797	psi1:0.928571428571,psi2:0	C1_26,C2_0	C1_2,C2_2	Yes
ENSG00000204463	BAG6	chr6:31611941-31612331	-	ES	108	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,108,30	31611971,31612084,31612191,31612302	No	No	No	bcc_59262|Cycle_0|Type_1	30,30	31611971,31612302	psi1:0.05,psi2:0.730769230769	C1_1,C2_19	C1_19,C2_7	Yes
ENSG00000188641	DPYD	chr1:97847986-97981312	-	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,165,31	97848017,97915615,97915779,97981282	No	Yes	No	bcc_45565|Cycle_2|Type_1	31,31	97848017,97981282	psi1:0.5,psi2:1.0	C1_2,C2_21	C1_2,C2_0	Yes
ENSG00000151914	DST	chr6:56358926-56362207	-	altA	22	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):56362177,56358978	52,31	56358978,56362177	No	No	No	bcc_15298|Cycle_0|Type_1	30,31	56358956,56362177	psi1:1.0,psi2:0.5	C1_42,C2_4	C1_0,C2_4	Yes
ENSG00000138069	RAB1A	chr2:65315242-65315305	-	deletion	6	No	-	protein_coding	no_known_ss	63	65315242	No	No	No	bcc_33708|Cycle_0|Type_1	26,31	65315268,65315275	psi1:0.46218487395,psi2:1.0	C1_55,C2_301	C1_64,C2_0	-
ENSG00000078668	VDAC3	chr8:42252620-42256258	+	ES	3	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,3,29	42252651,42254196,42254198,42256230	No	No	No	bcc_52962|Cycle_0|Type_1	31,29	42252651,42256230	psi1:0.78231292517,psi2:0.02	C1_115,C2_1	C1_32,C2_49	Yes
ENSG00000144115	THNSL2	chr2:88482562-88485480	+	ES_altA	187	Yes	Yes	protein_coding	4_ss_annotated_(over_5_ss):88482592,88485417,88484998,88484847	30,152,64	88482592,88484847,88484998,88485417	No	Yes	No	bcc_61948|Cycle_0|Type_1	30,29	88482592,88485452	psi1:0.5,psi2:1.0	C1_2,C2_20	C1_2,C2_0	Yes
ENSG00000073060	SCARB1	chr12:125263101-125270932	-	ES	129	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,129,30	125263132,125267229,125267357,125270903	No	No	No	bcc_54919|Cycle_0|Type_1	31,30	125263132,125270903	psi1:0.470588235294,psi2:0.995495495495	C1_8,C2_221	C1_9,C2_1	Yes
ENSG00000188641	DPYD	chr1:97847986-97981312	-	ES_MULTI	164	Yes	Yes	protein_coding	4_ss_annotated_(over_6_ss):97981282,97915779,97848017,97915615	31,64,100,31	97848017,97915615,97915678,97915680,97915779,97981282	No	Yes	No	bcc_45565|Cycle_3|Type_1	31,31	97848017,97981282	psi1:0.5,psi2:1.0	C1_2,C2_19	C1_2,C2_0	-;(AC:97981282,CT:97915779);(AC:97915615,CT:97848017);(AC:97981282,CT:97848017)
ENSG00000163681	SLMAP	chr3:57850553-57857392	+	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,51,30	57850584,57850969,57851019,57857363	No	Yes	No	bcc_61862|Cycle_1|Type_1	31,30	57850584,57857363	psi1:0.888888888889,psi2:0	C1_16,C2_0	C1_2,C2_2	Yes
ENSG00000123352	SPATS2	chr12:49918652-49919889	+	altA	134	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	27,163	49918679,49919727	No	No	No	bcc_13624|Cycle_0|Type_1	27,29	49918679,49919861	psi1:1.0,psi2:0.5	C1_24,C2_3	C1_0,C2_3	Yes
ENSG00000144283	PKP4	chr2:159530481-159535122	+	ES	129	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,129,30	159530512,159533251,159533379,159535093	No	No	No	bcc_30455|Cycle_0|Type_1	31,30	159530512,159535093	psi1:0.978354978355,psi2:0.35	C1_226,C2_7	C1_5,C2_13	Yes
ENSG00000144559	TAMM41	chr3:11832025-11851020	-	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,63,30	11832055,11849307,11849369,11850991	No	No	No	bcc_56029|Cycle_0|Type_1	30,30	11832055,11850991	psi1:0.5,psi2:1.0	C1_2,C2_13	C1_2,C2_0	Yes
ENSG00000171055	FEZ2	chr2:36785625-36805770	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,81,31	36785656,36787928,36788008,36805740	No	No	No	bcc_28145|Cycle_0|Type_1	31,31	36785656,36805740	psi1:0.926605504587,psi2:0	C1_101,C2_0	C1_8,C2_7	Yes
ENSG00000138434	SSFA2	chr2:182784143-182786705	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,54,31	182784173,182785324,182785377,182786675	No	Yes	No	bcc_39372|Cycle_1|Type_1	30,31	182784173,182786675	psi1:0.181818181818,psi2:0.85	C1_2,C2_17	C1_9,C2_3	Yes
ENSG00000119688	ABCD4	chr14:74756192-74757023	-	ES	92	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,92,30	74756222,74756730,74756821,74756994	No	No	No	bcc_66096|Cycle_0|Type_1	30,30	74756222,74756994	psi1:0.5,psi2:1.0	C1_2,C2_12	C1_2,C2_0	Yes
ENSG00000111642	CHD4	chr12:6711291-6711571	-	altA	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	50,30	6711341,6711542	No	No	No	bcc_26043|Cycle_0|Type_1	29,30	6711320,6711542	psi1:0.285714285714,psi2:1.0	C1_2,C2_3	C1_5,C2_0	Yes
ENSG00000145216	FIP1L1	chr4:54257276-54265926	+	ES	69	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,69,30	54257306,54257597,54257665,54265897	No	Yes	No	bcc_13982|Cycle_0|Type_1	30,30	54257306,54265897	psi1:0.878048780488,psi2:0.2	C1_36,C2_3	C1_5,C2_12	Yes
ENSG00000131470	PSMC3IP	chr17:40725011-40725154	+	IR	82	Yes	Yes	protein_coding	no_known_ss	143	-	No	No	No	bcc_49745|Cycle_0|Type_1	31,30	40725042,40725125	psi1:0.5,psi2:1.0	C1_2,C2_11	C1_2,C2_0	(CT:40725042,AC:40725125)
ENSG00000134121	CHL1	chr3:436524-440730	+	ES	159	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,159,31	436555,439910,440068,440700	No	No	No	bcc_31470|Cycle_0|Type_1	31,31	436555,440700	psi1:0.95145631068,psi2:0	C1_98,C2_0	C1_5,C2_4	Yes
ENSG00000122490	PQLC1	chr18:77679369-77693999	-	ES	84	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,84,31	77679400,77690228,77690311,77693969	No	Yes	No	bcc_20391|Cycle_6|Type_1	31,31	77679400,77693969	psi1:0.833333333333,psi2:0.111111111111	C1_5,C2_3	C1_1,C2_24	Yes
ENSG00000140612	SEC11A	chr15:85213982-85223970	-	ES	38	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,38,27	85214013,85223163,85223200,85223944	No	No	No	bcc_49533|Cycle_0|Type_1	31,27	85214013,85223944	psi1:0.583333333333,psi2:0	C1_49,C2_0	C1_35,C2_90	Yes
ENSG00000269893	SNHG8	chr4:119199917-119200574	+	altD	345	No	-	lincRNA	all_splice_sites_known_(3_ss)	375,31	119200292,119200544	No	No	No	bcc_58536|Cycle_0|Type_1	30,31	119199947,119200544	psi1:0.251700680272,psi2:0.934210526316	C1_37,C2_71	C1_110,C2_5	Yes
ENSG00000062598	ELMO2	chr20:45023112-45035217	-	ES	75	No	-	protein_coding	all_splice_sites_known_(4_ss)	30,75,31	45023142,45027336,45027410,45035187	No	Yes	No	bcc_57171|Cycle_1|Type_1	30,31	45023142,45035187	psi1:0.833333333333,psi2:0	C1_10,C2_0	C1_2,C2_2	Yes
ENSG00000001497	LAS1L	chrX:64744111-64744874	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,51,30	64744142,64744444,64744494,64744845	No	No	No	bcc_52245|Cycle_0|Type_1	31,30	64744142,64744845	psi1:0.6875,psi2:0.0625	C1_11,C2_1	C1_5,C2_15	Yes
ENSG00000133816	MICAL2	chr11:12284053-12285135	+	IR	1022	Yes	-	protein_coding	no_known_ss	1082	-	No	No	No	bcc_19732|Cycle_2|Type_1	31,29	12284084,12285107	psi1:0.523255813953,psi2:1.0	C1_45,C2_274	C1_41,C2_0	Yes
ENSG00000176853	FAM91A1	chr8:124826914-124826979	+	deletion	3	No	-	protein_coding	no_known_ss	65	124826914	No	No	No	bcc_34105|Cycle_0|Type_1	31,31	124826945,124826949	psi1:1.0,psi2:0.421052631579	C1_19,C2_8	C1_0,C2_11	-
ENSG00000104067	TJP1	chr15:29993862-29996453	-	altD	60	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,88	29993893,29996366	No	Yes	No	bcc_14201|Cycle_2|Type_1	31,28	29993893,29996426	psi1:0.944444444444,psi2:0.357142857143	C1_34,C2_5	C1_2,C2_9	Yes
ENSG00000159788	RGS12	chr4:3429865-3432163	+	ES	154	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,154,30	3429896,3430285,3430438,3432134	No	No	No	bcc_43059|Cycle_0|Type_1	31,30	3429896,3432134	psi1:0.967741935484,psi2:0.333333333333	C1_30,C2_1	C1_1,C2_2	Yes
ENSG00000188529	SRSF10	chr1:24294185-24298092	-	ES	102	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):24297929,24294213,24298063	28,102,30	24294213,24297828,24297929,24298063	No	No	No	bcc_17437|Cycle_0|Type_1	28,30	24294213,24298063	psi1:0.892857142857,psi2:0.25	C1_50,C2_5	C1_6,C2_15	Yes
ENSG00000125991	ERGIC3	chr20:34136588-34142845	+	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,15,31	34136618,34142143,34142157,34142815	No	No	No	bcc_54481|Cycle_0|Type_1	30,31	34136618,34142815	psi1:0.535714285714,psi2:0	C1_45,C2_0	C1_39,C2_115	Yes
ENSG00000100416	TRMU	chr22:46751455-46752767	+	ES	83	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,83,29	46751485,46751887,46751969,46752739	No	No	No	bcc_65063|Cycle_0|Type_1	30,29	46751485,46752739	psi1:0.333333333333,psi2:1.0	C1_2,C2_3	C1_4,C2_0	Yes
ENSG00000079805	DNM2	chr19:10941023-10941684	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	10941054,10941654	No	No	No	bcc_47287|Cycle_0|Type_1	31,28	10941054,10941657	psi1:0.333333333333,psi2:1.0	C1_2,C2_3	C1_4,C2_0	Yes
ENSG00000133030	MPRIP	chr17:17083371-17088165	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,29	17083402,17083921,17083983,17088137	No	No	No	bcc_36163|Cycle_0|Type_1	31,29	17083402,17088137	psi1:0.298701298701,psi2:0.972972972973	C1_23,C2_36	C1_54,C2_1	Yes
ENSG00000054965	FAM168A	chr11:73131014-73141765	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,27,31	73131044,73136067,73136093,73141735	No	No	No	bcc_54286|Cycle_0|Type_1	30,31	73131044,73141735	psi1:0.739130434783,psi2:0	C1_17,C2_0	C1_6,C2_7	Yes
ENSG00000196943	NOP9	chr14:24774944-24775182	+	IR	181	Yes	Yes	protein_coding	no_known_ss	238	-	No	No	No	bcc_419|Cycle_0|Type_1	27,30	24774971,24775153	psi1:1.0,psi2:0.12315270936	C1_41,C2_50	C1_0,C2_356	(CT:24774971,AC:24775153)
ENSG00000163697	APBB2	chr4:40814613-40814675	+	deletion	3	No	-	protein_coding	no_known_ss	62	40814613	No	No	No	bcc_38531|Cycle_0|Type_1	28,31	40814641,40814645	psi1:0.68,psi2:0	C1_17,C2_0	C1_8,C2_11	-
ENSG00000163875	MEAF6	chr1:37961488-37967435	-	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,30,31	37961519,37962308,37962337,37967405	No	No	No	bcc_42827|Cycle_0|Type_1	31,31	37961519,37967405	psi1:0.880952380952,psi2:0	C1_37,C2_0	C1_5,C2_4	Yes
ENSG00000152894	PTPRK	chr6:128320018-128326259	-	ES_MULTI	48	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,12,36,31	128320049,128322341,128322352,128324342,128324377,128326229	No	No	No	bcc_40443|Cycle_0|Type_1	31,31	128320049,128326229	psi1:0.5625,psi2:0	C1_9,C2_0	C1_7,C2_16	Yes
ENSG00000175416	CLTB	chr5:175819915-175824637	-	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,30	175819946,175823480,175823533,175824608	No	No	No	bcc_40409|Cycle_0|Type_1	31,30	175819946,175824608	psi1:0.819620253165,psi2:0	C1_259,C2_0	C1_57,C2_52	Yes
ENSG00000136153	LMO7	chr13:76427493-76430670	+	ES	109	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,109,29	76427524,76429396,76429504,76430642	No	No	No	bcc_39088|Cycle_0|Type_1	31,29	76427524,76430642	psi1:0.571428571429,psi2:1.0	C1_4,C2_40	C1_3,C2_0	Yes
ENSG00000135127	CCDC64	chr12:120527844-120530832	+	ES	109	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,109,29	120527875,120528715,120528823,120530804	No	No	No	bcc_66864|Cycle_1|Type_1	31,29	120527875,120530804	psi1:1.0,psi2:0.5	C1_7,C2_2	C1_0,C2_2	Yes
ENSG00000083223	ZCCHC6	chr9:88903632-88916220	-	ES	64	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):88903659,88916191	27,64,30	88903659,88913682,88913745,88916191	No	No	No	bcc_49380|Cycle_0|Type_1	27,30	88903659,88916191	psi1:0,psi2:0.777777777778	C1_0,C2_7	C1_2,C2_2	Yes
ENSG00000198399	ITSN2	chr2:24498690-24509111	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,81,31	24498718,24507632,24507712,24509081	No	No	No	bcc_30638|Cycle_0|Type_1	28,31	24498718,24509081	psi1:0.666666666667,psi2:0	C1_10,C2_0	C1_5,C2_7	Yes
ENSG00000135709	KIAA0513	chr16:85114967-85120278	+	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,30,29	85114998,85116170,85116199,85120250	No	No	No	bcc_60026|Cycle_0|Type_1	31,29	85114998,85120250	psi1:0.906976744186,psi2:0	C1_39,C2_0	C1_4,C2_3	Yes
ENSG00000125450	NUP85	chr17:73201858-73205948	+	ES	94	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,94,31	73201889,73204622,73204715,73205918	No	No	No	bcc_49162|Cycle_1|Type_1	31,31	73201889,73205918	psi1:0.5,psi2:1.0	C1_3,C2_10	C1_3,C2_0	Yes
ENSG00000105341	ATP5SL	chr19:41939547-41944153	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,81,31	41939578,41942297,41942377,41944123	No	No	No	bcc_26822|Cycle_0|Type_1	31,31	41939578,41944123	psi1:0.5,psi2:1.0	C1_6,C2_20	C1_6,C2_0	Yes
ENSG00000110921	MVK	chr12:110013919-110023856	+	ES_MULTI	301	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,145,156,30	110013950,110017607,110017751,110019200,110019355,110023827	No	Yes	No	bcc_62477|Cycle_0|Type_1	31,30	110013950,110023827	psi1:0.5,psi2:0.987179487179	C1_14,C2_77	C1_14,C2_1	Yes
ENSG00000087470	DNM1L	chr12:32890064-32893028	+	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,33,31	32890095,32891198,32891230,32892998	No	Yes	No	bcc_11731|Cycle_2|Type_1	31,31	32890095,32892998	psi1:0.875,psi2:0.266666666667	C1_14,C2_4	C1_2,C2_11	Yes
ENSG00000111832	RWDD1	chr6:116892787-116901486	+	ES_MULTI	242	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,128,114,29	116892818,116894021,116894148,116895221,116895334,116901458	No	Yes	No	bcc_43365|Cycle_1|Type_1	31,29	116892818,116901458	psi1:0.859375,psi2:0.2	C1_55,C2_4	C1_9,C2_16	Yes
ENSG00000138674	SEC31A	chr4:83778887-83784501	-	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,39,31	83778917,83783687,83783725,83784471	No	Yes	No	bcc_35456|Cycle_0|Type_1	30,31	83778917,83784471	psi1:0.923076923077,psi2:0.333333333333	C1_24,C2_8	C1_2,C2_16	Yes
ENSG00000108510	MED13	chr17:60020108-60020171	-	deletion	3	No	-	protein_coding	no_known_ss	63	60020108	No	No	No	bcc_22998|Cycle_0|Type_1	29,31	60020137,60020141	psi1:0.538461538462,psi2:1.0	C1_7,C2_31	C1_6,C2_0	-
ENSG00000084234	APLP2	chr11:130005579-130010320	+	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,36,28	130005610,130007151,130007186,130010293	No	No	No	bcc_29586|Cycle_0|Type_1	31,28	130005610,130010293	psi1:0.81954887218,psi2:0.201117318436	C1_109,C2_36	C1_24,C2_143	Yes
ENSG00000148498	PARD3	chr10:34620241-34626233	-	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,31	34620272,34625127,34625171,34626203	No	No	No	bcc_60412|Cycle_0|Type_1	31,31	34620272,34626203	psi1:0.5,psi2:1.0	C1_3,C2_9	C1_3,C2_0	Yes
ENSG00000204356	NELFE	chr6:31922625-31922866	-	altA	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	44,31	31922669,31922836	No	No	No	bcc_2183|Cycle_0|Type_1	29,31	31922654,31922836	psi1:1.0,psi2:0.571428571429	C1_28,C2_4	C1_0,C2_3	Yes
ENSG00000188313	PLSCR1	chr3:146243405-146251287	-	ES	218	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,218,31	146243434,146246401,146246618,146251257	No	No	No	bcc_51103|Cycle_0|Type_1	29,31	146243434,146251257	psi1:0.4375,psi2:0.966101694915	C1_7,C2_57	C1_9,C2_2	Yes
ENSG00000134851	TMEM165	chr4:56283383-56284000	-	IR	555	No	Yes	protein_coding	no_known_ss	617	-	No	No	No	bcc_35731|Cycle_0|Type_1	31,31	56283414,56283970	psi1:0.942148760331,psi2:0.0833333333333	C1_228,C2_1	C1_14,C2_11	(AG:56283970,GT:56283414)
ENSG00000101199	ARFGAP1	chr20:61917035-61917752	+	altA	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,35	61917065,61917718	No	No	No	bcc_70155|Cycle_0|Type_1	30,29	61917065,61917724	psi1:0.470588235294,psi2:1.0	C1_8,C2_19	C1_9,C2_0	Yes
ENSG00000144115	THNSL2	chr2:88482562-88485445	+	ES	152	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,152,29	88482592,88484847,88484998,88485417	No	Yes	No	bcc_61948|Cycle_4|Type_1	30,29	88482592,88485417	psi1:0.285714285714,psi2:0.894736842105	C1_2,C2_17	C1_5,C2_2	Yes
ENSG00000123992	DNPEP	chr2:220251640-220251822	-	altA	32	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	62,31	220251702,220251792	No	No	No	bcc_68267|Cycle_0|Type_1	30,31	220251670,220251792	psi1:0.333333333333,psi2:0.941176470588	C1_1,C2_16	C1_2,C2_1	Yes
ENSG00000115504	EHBP1	chr2:63206440-63217880	+	ES	108	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,108,30	63206470,63215066,63215173,63217851	No	No	No	bcc_45992|Cycle_0|Type_1	30,30	63206470,63217851	psi1:0.951219512195,psi2:0.409090909091	C1_39,C2_9	C1_2,C2_13	Yes
ENSG00000197965	MPZL1	chr1:167742574-167757086	+	ES	103	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,103,30	167742605,167745301,167745403,167757057	No	No	No	bcc_5840|Cycle_0|Type_1	31,30	167742605,167757057	psi1:0.375,psi2:0.933333333333	C1_3,C2_14	C1_5,C2_1	Yes
ENSG00000100280	AP1B1	chr22:29724854-29726397	-	ES	9	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,9,31	29724884,29725701,29725709,29726367	No	No	No	bcc_18193|Cycle_0|Type_1	30,31	29724884,29726367	psi1:0.84,psi2:0.238095238095	C1_21,C2_5	C1_4,C2_16	Yes
ENSG00000081803	CADPS2	chr7:122019466-122027110	-	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,15,31	122019496,122026349,122026363,122027080	No	No	No	bcc_7378|Cycle_0|Type_1	30,31	122019496,122027080	psi1:0.111111111111,psi2:0.7	C1_2,C2_7	C1_16,C2_3	Yes
ENSG00000196961	AP2A1	chr19:50305368-50306236	+	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,66,31	50305398,50305791,50305856,50306206	No	No	No	bcc_21186|Cycle_1|Type_1	30,31	50305398,50306206	psi1:0.730769230769,psi2:0.0833333333333	C1_19,C2_1	C1_7,C2_11	Yes
ENSG00000079432	CIC	chr19:42797957-42798120	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	42797988,42798087	No	No	No	bcc_73238|Cycle_0|Type_1	31,31	42797988,42798090	psi1:0.846153846154,psi2:0	C1_22,C2_0	C1_4,C2_3	Yes
ENSG00000075539	FRYL	chr4:48503720-48507594	-	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,18,31	48503750,48504845,48504862,48507564	No	No	No	bcc_28895|Cycle_0|Type_1	30,31	48503750,48507564	psi1:0.846153846154,psi2:0	C1_22,C2_0	C1_4,C2_3	Yes
ENSG00000004897	CDC27	chr17:45219359-45219625	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	45219391,45219595	No	No	No	bcc_9544|Cycle_0|Type_1	29,31	45219388,45219595	psi1:0.333333333333,psi2:0.909090909091	C1_3,C2_10	C1_6,C2_1	Yes
ENSG00000164442	CITED2	chr6:139694936-139694996	-	deletion	3	No	Yes	protein_coding	no_known_ss	60	139694936	No	No	No	bcc_77995|Cycle_0|Type_1	26,31	139694962,139694966	psi1:1.0,psi2:0.4	C1_3,C2_2	C1_0,C2_3	-
PUTATIVE_ENSG00000197930	PUTATIVE_ENSG00000197930	chr14:53110003-53110064	-	deletion	3	No	-	-	no_known_ss	61	53110003	No	No	No	bcc_17912|Cycle_0|Type_1	27,31	53110030,53110034	psi1:1.0,psi2:0.411764705882	C1_11,C2_7	C1_0,C2_10	-
ENSG00000116698	SMG7	chr1:183515441-183518373	+	ES	150	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,150,31	183515472,183516238,183516387,183518343	No	No	No	bcc_38731|Cycle_0|Type_1	31,31	183515472,183518343	psi1:0.948717948718,psi2:0.4	C1_37,C2_4	C1_2,C2_6	Yes
ENSG00000112787	FBRSL1	chr12:133148893-133149143	+	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	37,31	133148930,133149113	No	No	No	bcc_72562|Cycle_0|Type_1	31,31	133148924,133149113	psi1:0.428571428571,psi2:1.0	C1_3,C2_5	C1_4,C2_0	Yes
ENSG00000187079	TEAD1	chr11:12886417-12901284	+	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,12,30	12886447,12900436,12900447,12901255	No	No	No	bcc_64937|Cycle_0|Type_1	30,30	12886447,12901255	psi1:0.625,psi2:0	C1_5,C2_0	C1_3,C2_4	Yes
ENSG00000132323	ILKAP	chr2:239102944-239103475	-	altD	23	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	28,53	239102972,239103423	No	No	No	bcc_55650|Cycle_0|Type_1	28,30	239102972,239103446	psi1:0.714285714286,psi2:0	C1_5,C2_0	C1_2,C2_2	Yes
ENSG00000114316	USP4	chr3:49323725-49329973	-	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):49323758,49329943	33,31	49323758,49329943	No	No	No	bcc_2031|Cycle_0|Type_1	27,31	49323752,49329943	psi1:0.5,psi2:1.0	C1_2,C2_5	C1_2,C2_0	Yes
ENSG00000124783	SSR1	chr6:7290133-7295655	-	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,15,31	7290164,7295321,7295335,7295625	No	No	No	bcc_13206|Cycle_0|Type_1	31,31	7290164,7295625	psi1:0.431818181818,psi2:0	C1_19,C2_0	C1_25,C2_114	Yes
ENSG00000197555	SIPA1L1	chr14:72169191-72171968	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,30	72169222,72171438,72171500,72171939	No	No	No	bcc_31608|Cycle_0|Type_1	31,30	72169222,72171939	psi1:0.9,psi2:0.333333333333	C1_9,C2_2	C1_1,C2_4	Yes
ENSG00000010244	ZNF207	chr17:30692475-30694821	+	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,93,31	30692506,30693684,30693776,30694791	No	No	No	bcc_7003|Cycle_0|Type_1	31,31	30692506,30694791	psi1:1.0,psi2:0.490566037736	C1_57,C2_26	C1_0,C2_27	Yes
ENSG00000104613	INTS10	chr8:19703279-19709190	+	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,78,31	19703308,19706673,19706750,19709160	No	No	No	bcc_48513|Cycle_0|Type_1	29,31	19703308,19709160	psi1:0.516129032258,psi2:0.0204081632653	C1_16,C2_1	C1_15,C2_48	Yes
ENSG00000143110	C1orf162	chr1:112020019-112020635	+	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,125,31	112020050,112020273,112020397,112020605	No	Yes	No	bcc_46290|Cycle_0|Type_1	31,31	112020050,112020605	psi1:0.533333333333,psi2:1.0	C1_8,C2_23	C1_7,C2_0	Yes
ENSG00000063046	EIF4B	chr12:53435594-53435656	+	deletion	3	No	-	protein_coding	no_known_ss	62	53435594	Yes	No	No	bcc_3427|Cycle_0|Type_1	28,31	53435622,53435626	psi1:0,psi2:0.428571428571	C1_0,C2_33	C1_178,C2_44	-
ENSG00000187416	LHFPL3	chr7:104311620-104311682	+	deletion	3	No	-	protein_coding	no_known_ss	62	104311620	Yes	No	No	bcc_3427|Cycle_0|Type_1	28,31	104311648,104311652	psi1:0,psi2:0.428571428571	C1_0,C2_33	C1_178,C2_44	-
-	unknown_gene	chrX:110861211-110861273	0	deletion	3	No	-	-	no_ss	62	110861211	Yes	No	No	bcc_3427|Cycle_0|Type_1	28,31	110861239,110861243	psi1:0,psi2:0.428571428571	C1_0,C2_33	C1_178,C2_44	-
ENSG00000163374	YY1AP1	chr1:155638477-155640141	-	altA	60	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	91,31	155638568,155640111	No	No	No	bcc_2487|Cycle_7|Type_1	31,31	155638508,155640111	psi1:0.711538461538,psi2:0.0526315789474	C1_37,C2_1	C1_15,C2_18	Yes
ENSG00000159658	EFCAB14	chr1:47152512-47155289	-	ES	192	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,192,31	47152542,47154025,47154216,47155259	No	No	No	bcc_30751|Cycle_0|Type_1	30,31	47152542,47155259	psi1:0.941747572816,psi2:0.380952380952	C1_97,C2_8	C1_6,C2_13	Yes
ENSG00000134283	PPHLN1	chr12:42768846-42781288	+	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,57,31	42768876,42778742,42778798,42781258	No	No	No	bcc_11618|Cycle_0|Type_1	30,31	42768876,42781258	psi1:0.5,psi2:1.0	C1_14,C2_29	C1_14,C2_0	Yes
ENSG00000175061	FAM211A-AS1	chr17:16342697-16342924	+	altA	53	Yes	-	processed_transcript	all_splice_sites_known_(3_ss)	31,83	16342728,16342842	No	Yes	No	bcc_27470|Cycle_0|Type_1	31,30	16342728,16342895	psi1:0.5,psi2:0.975	C1_10,C2_39	C1_10,C2_1	Yes
ENSG00000138326	RPS24	chr10:79797031-79800401	+	ES_MULTI	40	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,18,22,29	79797062,79797723,79797740,79799962,79799983,79800373	No	Yes	No	bcc_24161|Cycle_12|Type_1	31,29	79797062,79800373	psi1:0.96,psi2:0.41341991342	C1_384,C2_191	C1_16,C2_271	Yes
ENSG00000132694	ARHGEF11	chr1:156907258-156909370	-	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,96,31	156907288,156908210,156908305,156909340	No	No	No	bcc_50485|Cycle_0|Type_1	30,31	156907288,156909340	psi1:1.0,psi2:0.5625	C1_29,C2_9	C1_0,C2_7	Yes
ENSG00000124104	SNX21	chr20:44463717-44469308	+	altD	7	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	38,31	44463755,44469278	No	Yes	No	bcc_77141|Cycle_2|Type_1	31,31	44463748,44469278	psi1:0.333333333333,psi2:1.0	C1_1,C2_1	C1_2,C2_0	Yes
ENSG00000176444	CLK2	chr1:155239475-155240629	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	155239507,155240599	No	No	No	bcc_75819|Cycle_0|Type_1	29,31	155239504,155240599	psi1:0.5,psi2:1.0	C1_2,C2_4	C1_2,C2_0	Yes
ENSG00000198888	MT-ND1	chrMT:3732-3792	+	deletion	3	No	Yes	protein_coding	no_known_ss	60	3732	No	No	No	bcc_71429|Cycle_0|Type_1	28,29	3760,3764	psi1:1.0,psi2:0.5	C1_6,C2_3	C1_0,C2_3	-
ENSG00000074054	CLASP1	chr2:122165261-122168472	-	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,24,31	122165291,122166600,122166623,122168442	No	No	No	bcc_60875|Cycle_0|Type_1	30,31	122165291,122168442	psi1:0.666666666667,psi2:0	C1_12,C2_0	C1_6,C2_6	Yes
ENSG00000163719	MTMR14	chr3:9731796-9743504	+	ES	156	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,156,31	9731827,9739395,9739550,9743474	No	No	No	bcc_59368|Cycle_0|Type_1	31,31	9731827,9743474	psi1:0.4,psi2:0.933333333333	C1_2,C2_14	C1_3,C2_1	Yes
ENSG00000119242	CCDC92	chr12:124428873-124457105	-	altA	10	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):124457076,124428911	38,30	124428911,124457076	No	No	No	bcc_45890|Cycle_0|Type_1	28,30	124428901,124457076	psi1:1.0,psi2:0.5	C1_6,C2_3	C1_0,C2_3	Yes
ENSG00000198860	TSEN15	chr1:184023966-184041988	+	ES	142	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,142,28	184023997,184041291,184041432,184041961	No	No	No	bcc_19343|Cycle_0|Type_1	31,28	184023997,184041961	psi1:0.5,psi2:1.0	C1_12,C2_24	C1_12,C2_0	Yes
ENSG00000087470	DNM1L	chr12:32890065-32891224	+	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,78,27	32890095,32890799,32890876,32891198	No	Yes	No	bcc_11731|Cycle_8|Type_1	30,27	32890095,32891198	psi1:0.966101694915,psi2:0.428571428571	C1_57,C2_3	C1_2,C2_4	Yes
ENSG00000126012	KDM5C	chrX:53222789-53222994	-	altD	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,40	53222818,53222955	No	No	No	bcc_68960|Cycle_0|Type_1	29,31	53222818,53222964	psi1:0.4375,psi2:1.0	C1_7,C2_10	C1_9,C2_0	Yes
ENSG00000110514	MADD	chr11:47330220-47330862	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,63,31	47330250,47330531,47330593,47330832	No	No	No	bcc_54686|Cycle_0|Type_1	30,31	47330250,47330832	psi1:0.8,psi2:0	C1_40,C2_0	C1_10,C2_7	Yes
ENSG00000100650	SRSF5	chr14:70233942-70234883	+	altD	125	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	155,29	70234097,70234855	No	Yes	No	bcc_37430|Cycle_0|Type_1	30,29	70233972,70234855	psi1:0.766666666667,psi2:0.190476190476	C1_23,C2_8	C1_7,C2_34	Yes
ENSG00000078237	C12orf5	chr12:4446296-4460462	+	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,78,30	4446326,4458985,4459062,4460433	No	No	No	bcc_54564|Cycle_0|Type_1	30,30	4446326,4460433	psi1:1.0,psi2:0.571428571429	C1_13,C2_4	C1_0,C2_3	Yes
ENSG00000215712	TMEM242	chr6:157713229-157713289	-	deletion	3	No	-	protein_coding	no_known_ss	60	157713229	No	No	No	bcc_39731|Cycle_0|Type_1	26,31	157713255,157713259	psi1:1.0,psi2:0.571428571429	C1_13,C2_4	C1_0,C2_3	-
ENSG00000061936	SFSWAP	chr12:132198707-132199395	+	altD	47	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	78,29	132198785,132199367	No	No	No	bcc_38220|Cycle_0|Type_1	31,29	132198738,132199367	psi1:1.0,psi2:0.571428571429	C1_13,C2_4	C1_0,C2_3	Yes
ENSG00000166783	KIAA0430	chr16:15719623-15724219	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,31	15719657,15724189	No	No	No	bcc_62556|Cycle_0|Type_1	31,31	15719654,15724189	psi1:0.428571428571,psi2:1.0	C1_3,C2_4	C1_4,C2_0	Yes
ENSG00000099290	FAM21A	chr10:51885909-51887373	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,63,31	51885939,51886920,51886982,51887343	No	Yes	No	bcc_42745|Cycle_2|Type_1	30,31	51885939,51887343	psi1:0.371428571429,psi2:1.0	C1_13,C2_14	C1_22,C2_0	Yes
ENSG00000103266	STUB1	chr16:731850-732050	-	IR	139	Yes	Yes	protein_coding	no_known_ss	200	-	No	No	No	bcc_45274|Cycle_0|Type_1	30,31	731880,732020	psi1:0.211267605634,psi2:0.795081967213	C1_15,C2_97	C1_56,C2_25	(AG:732020,GT:731880)
ENSG00000224078	SNHG14	chr15:25344399-25349035	+	ES	112	Yes	-	processed_transcript	2_ss_annotated_(over_4_ss):25344425,25349006	26,112,30	25344425,25345926,25346037,25349006	No	No	No	bcc_55216|Cycle_0|Type_1	26,30	25344425,25349006	psi1:0.8125,psi2:0	C1_13,C2_0	C1_3,C2_2	Yes
ENSG00000185813	PCYT2	chr17:79864745-79865460	-	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,54,31	79864774,79865080,79865133,79865430	No	No	No	bcc_62124|Cycle_0|Type_1	29,31	79864774,79865430	psi1:0,psi2:0.621621621622	C1_0,C2_23	C1_15,C2_14	Yes
ENSG00000198648	STK39	chr2:168920051-168931522	-	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,63,31	168920080,168921829,168921891,168931492	No	No	No	bcc_43433|Cycle_0|Type_1	29,31	168920080,168931492	psi1:0.959595959596,psi2:0	C1_95,C2_0	C1_4,C2_2	Yes
ENSG00000105518	TMEM205	chr19:11456274-11456832	+	IR	498	No	-	protein_coding	no_known_ss	558	-	No	Yes	No	bcc_63141|Cycle_6|Type_1	30,30	11456304,11456803	psi1:0.830357142857,psi2:0.261538461538	C1_93,C2_17	C1_19,C2_48	(CT:11456304,AC:11456803)
ENSG00000187742	SECISBP2	chr9:91953467-91956292	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,90,31	91953495,91954779,91954868,91956262	No	No	No	bcc_47161|Cycle_0|Type_1	28,31	91953495,91956262	psi1:0.583333333333,psi2:1.0	C1_7,C2_23	C1_5,C2_0	Yes
ENSG00000156642	NPTN	chr15:73854291-73862521	-	unclassified	12	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	20,22,31	73854311,73855577,73855598,73862491	No	No	No	bcc_32275|Cycle_0|Type_1	20,10,31	73854311,73855577,73855586,73862491	psi1:0.176470588235,psi2:1.0	C1_27,C2_17	C1_126,C2_0	Yes
ENSG00000139793	MBNL2	chr13:98009858-98043603	+	ES_MULTI	131	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,36,95,28	98009889,98017390,98017425,98018713,98018807,98043576	No	Yes	No	bcc_38902|Cycle_1|Type_1	31,28	98009889,98043576	psi1:0.827586206897,psi2:0.264705882353	C1_24,C2_9	C1_5,C2_25	Yes
ENSG00000129116	PALLD	chr4:169846198-169847393	+	ES	46	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,46,30	169846229,169846384,169846429,169847364	No	No	No	bcc_37184|Cycle_0|Type_1	31,30	169846229,169847364	psi1:0.62962962963,psi2:0	C1_17,C2_0	C1_10,C2_10	Yes
ENSG00000149564	ESAM	chr11:124624206-124624566	-	altD	11	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,41	124624236,124624526	No	No	No	bcc_56716|Cycle_0|Type_1	30,30	124624236,124624537	psi1:0.8,psi2:0.222222222222	C1_4,C2_2	C1_1,C2_7	Yes
ENSG00000060656	PTPRU	chr1:29631909-29637286	+	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,18,31	29631940,29633641,29633658,29637256	No	No	No	bcc_65823|Cycle_0|Type_1	31,31	29631940,29637256	psi1:0.5,psi2:0	C1_3,C2_0	C1_3,C2_5	Yes
ENSG00000129197	RPAIN	chr17:5326118-5335891	+	ES	141	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,141,30	5326149,5331391,5331531,5335862	No	Yes	No	bcc_37873|Cycle_1|Type_1	31,30	5326149,5335862	psi1:0.5,psi2:0.969696969697	C1_11,C2_32	C1_11,C2_1	Yes
ENSG00000149089	APIP	chr11:34912069-34937805	-	ES	101	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,101,31	34912099,34916557,34916657,34937775	No	No	No	bcc_41719|Cycle_0|Type_1	30,31	34912099,34937775	psi1:0.588235294118,psi2:1.0	C1_10,C2_30	C1_7,C2_0	Yes
ENSG00000100461	RBM23	chr14:23375546-23378722	-	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,48,31	23375577,23377542,23377589,23378692	No	No	No	bcc_15909|Cycle_0|Type_1	31,31	23375577,23378692	psi1:0.238095238095,psi2:0.818181818182	C1_5,C2_9	C1_16,C2_2	Yes
ENSG00000145349	CAMK2D	chr4:114421639-114430821	-	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,42,28	114421667,114424092,114424133,114430794	No	Yes	No	bcc_10665|Cycle_2|Type_1	28,28	114421667,114430794	psi1:0.821428571429,psi2:0	C1_23,C2_0	C1_5,C2_3	Yes
ENSG00000147526	TACC1	chr8:38678124-38682856	+	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,36,31	38678153,38681508,38681543,38682826	No	No	No	bcc_25809|Cycle_4|Type_1	29,31	38678153,38682826	psi1:0.571428571429,psi2:0	C1_8,C2_0	C1_6,C2_7	Yes
ENSG00000126214	KLC1	chr14:104145824-104151353	+	altD	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	58,31	104145882,104151323	No	Yes	No	bcc_42941|Cycle_10|Type_1	31,31	104145855,104151323	psi1:0.101449275362,psi2:0.9	C1_14,C2_9	C1_124,C2_1	Yes
ENSG00000102606	ARHGEF7	chr13:111940759-111953125	+	ES	177	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,177,31	111940790,111944465,111944641,111953095	No	No	No	bcc_42780|Cycle_0|Type_1	31,31	111940790,111953095	psi1:0.76,psi2:0	C1_38,C2_0	C1_12,C2_8	Yes
ENSG00000067141	NEO1	chr15:73558721-73562426	+	altA	48	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,76	73558752,73562351	No	No	No	bcc_1193|Cycle_1|Type_1	31,28	73558752,73562399	psi1:0.918918918919,psi2:0.333333333333	C1_34,C2_2	C1_3,C2_4	Yes
ENSG00000143110	C1orf162	chr1:112020019-112020635	+	ES	50	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,50,31	112020050,112020348,112020397,112020605	No	Yes	No	bcc_46290|Cycle_1|Type_1	31,31	112020050,112020605	psi1:0.588235294118,psi2:1.0	C1_10,C2_27	C1_7,C2_0	Yes
ENSG00000121210	KIAA0922	chr4:154542970-154544081	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):154543001,154544050	31,32	154543001,154544050	No	No	No	bcc_67886|Cycle_0|Type_1	31,29	154543001,154544053	psi1:0.5,psi2:1.0	C1_2,C2_3	C1_2,C2_0	Yes
ENSG00000109689	STIM2	chr4:27009292-27010078	+	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,24,29	27009322,27009605,27009628,27010050	No	No	No	bcc_57315|Cycle_0|Type_1	30,29	27009322,27010050	psi1:0.666666666667,psi2:0	C1_22,C2_0	C1_11,C2_9	Yes
ENSG00000187164	KIAA1598	chr10:118646046-118671330	-	ES_MULTI	314	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,193,121,30	118646077,118661276,118661468,118666138,118666258,118671301	No	No	No	bcc_15217|Cycle_0|Type_1	31,30	118646077,118671301	psi1:0.350649350649,psi2:1.0	C1_54,C2_46	C1_100,C2_0	Yes
ENSG00000214078	CPNE1	chr20:34214272-34214518	-	IR	185	Yes	Yes	protein_coding	no_known_ss	246	-	No	No	No	bcc_6824|Cycle_2|Type_1	31,30	34214303,34214489	psi1:1.0,psi2:0.526315789474	C1_17,C2_10	C1_0,C2_9	Yes
ENSG00000082641	NFE2L1	chr17:46133929-46134734	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,29	46133960,46134394,46134483,46134706	No	No	No	bcc_22785|Cycle_2|Type_1	31,29	46133960,46134706	psi1:0.0743243243243,psi2:0.709677419355	C1_22,C2_22	C1_274,C2_9	Yes
ENSG00000203747	FCGR3A	chr1:161518435-161519495	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	33,21,9	161518468,161518801,161518821,161519487	Yes	No	No	bcc_37495|Cycle_0|Type_1	30,21,9	161518465,161518801,161518821,161519487	psi1:1.0,psi2:0.6	C1_17,C2_6	C1_0,C2_4	Yes
ENSG00000203747,ENSG00000162747	FCGR3A,FCGR3B	chr1:161599792-161600853	-	altA	3	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(5_ss)	33,21,9	161599825,161600158,161600178,161600845	Yes	No	No	bcc_37495|Cycle_0|Type_1	30,21,9	161599822,161600158,161600178,161600845	psi1:1.0,psi2:0.6	C1_17,C2_6	C1_0,C2_4	Yes
ENSG00000146072	TNFRSF21	chr6:47199568-47199632	+	deletion	3	No	-	protein_coding	no_known_ss	64	47199568	No	No	No	bcc_24633|Cycle_0|Type_1	30,31	47199598,47199602	psi1:1.0,psi2:0.666666666667	C1_47,C2_6	C1_0,C2_3	-
ENSG00000128881	TTBK2	chr15:43132601-43170777	-	ES	148	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,148,31	43132631,43164809,43164956,43170747	No	No	No	bcc_56471|Cycle_0|Type_1	30,31	43132631,43170747	psi1:0.953488372093,psi2:0.333333333333	C1_41,C2_1	C1_2,C2_2	Yes
ENSG00000135776	ABCB10	chr1:229654593-229661713	-	ES	44	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,44,31	229654622,229657339,229657382,229661683	Yes	No	No	bcc_40074|Cycle_0|Type_1	29,31	229654622,229661683	psi1:0.666666666667,psi2:1.0	C1_2,C2_15	C1_1,C2_0	Yes
ENSG00000160145	KALRN	chr3:124114121-124117571	+	altD	39	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	69,28	124114190,124117544	No	No	No	bcc_68818|Cycle_0|Type_1	30,28	124114151,124117544	psi1:0.727272727273,psi2:0	C1_16,C2_0	C1_6,C2_4	Yes
ENSG00000169919	GUSB	chr7:65439357-65439542	-	altA	40	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	71,30	65439428,65439513	No	No	No	bcc_17146|Cycle_0|Type_1	31,30	65439388,65439513	psi1:0.5,psi2:0.972972972973	C1_2,C2_36	C1_2,C2_1	Yes
ENSG00000134758	RNF138	chr18:29709419-29709479	-	deletion	3	No	-	protein_coding	no_known_ss	60	29709419	No	No	No	bcc_54085|Cycle_1|Type_1	26,31	29709445,29709449	psi1:1.0,psi2:0.583333333333	C1_16,C2_7	C1_0,C2_5	-
ENSG00000164830	OXR1	chr8:107726182-107751714	+	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,81,29	107726213,107749748,107749828,107751686	No	No	No	bcc_24989|Cycle_0|Type_1	31,29	107726213,107751686	psi1:0.946666666667,psi2:0.25	C1_71,C2_1	C1_4,C2_3	Yes
ENSG00000063245	EPN1	chr19:56188553-56189920	+	ES	32	Yes	Yes	protein_coding	3_ss_annotated_(over_4_ss):56188584,56188916,56189893	31,32,28	56188584,56188916,56188947,56189893	No	Yes	No	bcc_58663|Cycle_4|Type_1	31,28	56188584,56189893	psi1:0,psi2:0.866666666667	C1_0,C2_13	C1_1,C2_2	Yes
ENSG00000136933	RABEPK	chr9:127969969-127982847	+	ES	153	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,153,30	127970000,127975649,127975801,127982818	No	Yes	No	bcc_55928|Cycle_1|Type_1	31,30	127970000,127982818	psi1:0.555555555556,psi2:0.975	C1_10,C2_39	C1_8,C2_1	Yes
ENSG00000220804	AC093642.5	chr2:243056861-243061144	+	ES	50	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	31,50,29	243056892,243058334,243058383,243061116	No	Yes	No	bcc_45542|Cycle_24|Type_1	31,29	243056892,243061116	psi1:0.979591836735,psi2:0.571428571429	C1_48,C2_12	C1_1,C2_9	Yes
ENSG00000134138	MEIS2	chr15:37187413-37188859	-	altA	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	49,31	37187462,37188829	No	No	No	bcc_35639|Cycle_0|Type_1	28,31	37187441,37188829	psi1:0.666666666667,psi2:0	C1_8,C2_0	C1_4,C2_3	(GC:37188829,CT:37187441);(GC:37188829,CT:37187462)
ENSG00000180776	ZDHHC20	chr13:21955659-21957089	-	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,45,31	21955688,21956040,21956084,21957059	No	No	No	bcc_2260|Cycle_0|Type_1	29,31	21955688,21957059	psi1:0.853658536585,psi2:0	C1_35,C2_0	C1_6,C2_3	Yes
ENSG00000143303	RRNAD1	chr1:156703281-156705545	+	ES	44	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,44,29	156703312,156703801,156703844,156705517	No	No	No	bcc_57367|Cycle_0|Type_1	31,29	156703312,156705517	psi1:0.25,psi2:0.818181818182	C1_1,C2_9	C1_3,C2_2	Yes
ENSG00000115211	EIF2B4	chr2:27592047-27592311	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	27592079,27592281	No	No	No	bcc_50116|Cycle_0|Type_1	29,31	27592076,27592281	psi1:0.9,psi2:0.4	C1_9,C2_2	C1_1,C2_3	Yes
ENSG00000166479	TMX3	chr18:66344082-66344145	+	deletion	3	No	-	protein_coding	no_known_ss	63	66344082	No	No	No	bcc_54606|Cycle_0|Type_1	29,31	66344111,66344115	psi1:1.0,psi2:0.642857142857	C1_34,C2_9	C1_0,C2_5	-
ENSG00000115839	RAB3GAP1	chr2:135922235-135926144	+	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,21,30	135922266,135925263,135925283,135926115	No	No	No	bcc_33237|Cycle_0|Type_1	31,30	135922266,135926115	psi1:0.586206896552,psi2:0	C1_17,C2_0	C1_12,C2_11	Yes
ENSG00000135341	MAP3K7	chr6:91269903-91271370	-	altA	20	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):91271341,91269933	50,30	91269953,91271341	No	No	No	bcc_37237|Cycle_0|Type_1	30,30	91269933,91271341	psi1:0,psi2:0.4	C1_0,C2_4	C1_14,C2_6	Yes
ENSG00000121900	TMEM54	chr1:33361215-33363756	-	ES_altA	159	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	129,60,30	33361344,33361511,33361570,33363727	No	No	No	bcc_21405|Cycle_0|Type_1	30,30	33361245,33363727	psi1:1.0,psi2:0.666666666667	C1_21,C2_4	C1_0,C2_2	Yes
ENSG00000066654	THUMPD1	chr16:20745401-20745468	-	deletion	6	No	-	protein_coding	no_known_ss	67	20745401	No	No	No	bcc_30742|Cycle_0|Type_1	30,31	20745431,20745438	psi1:1.0,psi2:0.347826086957	C1_6,C2_8	C1_0,C2_15	-
ENSG00000119185	ITGB1BP1	chr2:9558830-9562637	-	ES	111	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,111,30	9558861,9560119,9560229,9562608	No	No	No	bcc_47344|Cycle_0|Type_1	31,30	9558861,9562608	psi1:0.833333333333,psi2:0.285714285714	C1_15,C2_2	C1_3,C2_5	Yes
ENSG00000056586	RC3H2	chr9:125652795-125655222	-	altD	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):125652824,125655188	29,35	125652824,125655188	No	No	No	bcc_63505|Cycle_0|Type_1	29,29	125652824,125655194	psi1:0.444444444444,psi2:1.0	C1_4,C2_4	C1_5,C2_0	Yes
ENSG00000151150	ANK3	chr10:61898818-61926612	-	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,63,31	61898845,61926349,61926411,61926582	No	No	No	bcc_17103|Cycle_0|Type_1	27,31	61898845,61926582	psi1:0.833333333333,psi2:0	C1_20,C2_0	C1_4,C2_2	Yes
ENSG00000100418	DESI1	chr22:41995193-41995255	+	deletion	3	No	-	protein_coding	no_known_ss	62	41995193	No	No	No	bcc_10880|Cycle_0|Type_1	28,31	41995221,41995225	psi1:1.0,psi2:0.615384615385	C1_41,C2_16	C1_0,C2_10	-
ENSG00000175582	RAB6A	chr11:73387031-73387094	+	deletion	6	No	-	protein_coding	no_known_ss	63	73387031	No	No	No	bcc_10686|Cycle_0|Type_1	26,31	73387057,73387064	psi1:1.0,psi2:0.566666666667	C1_150,C2_85	C1_0,C2_65	-
ENSG00000116698	SMG7	chr1:183511470-183513516	+	altD	138	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	167,29	183511637,183513488	No	No	No	bcc_38727|Cycle_0|Type_1	29,29	183511499,183513488	psi1:0.741935483871,psi2:0.166666666667	C1_23,C2_2	C1_8,C2_10	Yes
ENSG00000145685	LHFPL2	chr5:77783437-77783500	-	deletion	3	No	-	protein_coding	no_known_ss	63	77783437	No	No	No	bcc_53508|Cycle_0|Type_1	29,31	77783466,77783470	psi1:0.384615384615,psi2:1.0	C1_5,C2_4	C1_8,C2_0	-
ENSG00000139793	MBNL2	chr13:98009858-98018742	+	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,36,30	98009889,98017390,98017425,98018713	No	Yes	No	bcc_38902|Cycle_2|Type_1	31,30	98009889,98018713	psi1:0.615384615385,psi2:0	C1_8,C2_0	C1_5,C2_4	Yes
ENSG00000090539	CHRD	chr3:184106753-184107188	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,34	184106783,184107155	No	No	No	bcc_27560|Cycle_0|Type_1	30,31	184106783,184107158	psi1:0,psi2:0.818181818182	C1_0,C2_9	C1_1,C2_2	Yes
ENSG00000138674	SEC31A	chr4:83778888-83784501	-	ES_MULTI	117	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,78,39,31	83778917,83782784,83782861,83783687,83783725,83784471	No	Yes	No	bcc_35456|Cycle_4|Type_1	29,31	83778917,83784471	psi1:0.945945945946,psi2:0.483870967742	C1_35,C2_15	C1_2,C2_16	Yes
ENSG00000122705	CLTA	chr9:36204147-36211630	+	ES_MULTI	90	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,54,36,31	36204176,36209264,36209317,36210622,36210657,36211600	No	Yes	No	bcc_54892|Cycle_1|Type_1	29,31	36204176,36211600	psi1:0.570815450644,psi2:0	C1_133,C2_0	C1_100,C2_91	Yes
ENSG00000137842	TMEM62	chr15:43461844-43473408	+	ES	105	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,105,30	43461875,43470805,43470909,43473379	No	No	No	bcc_46558|Cycle_0|Type_1	31,30	43461875,43473379	psi1:0.583333333333,psi2:1.0	C1_7,C2_13	C1_5,C2_0	Yes
ENSG00000149489	ROM1	chr11:62381216-62381760	+	altD	96	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	127,31	62381343,62381730	No	No	No	bcc_57378|Cycle_0|Type_1	31,31	62381247,62381730	psi1:1.0,psi2:0.666666666667	C1_17,C2_4	C1_0,C2_2	Yes
ENSG00000116641	DOCK7	chr1:62976314-62979172	-	altD	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,58	62976344,62979115	No	No	No	bcc_56174|Cycle_0|Type_1	30,31	62976344,62979142	psi1:0.8,psi2:0.25	C1_8,C2_1	C1_2,C2_3	Yes
ENSG00000184182	UBE2F	chr2:238903420-238934012	+	ES	68	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,68,30	238903451,238925208,238925275,238933983	No	Yes	No	bcc_54437|Cycle_0|Type_1	31,30	238903451,238933983	psi1:0.571428571429,psi2:0.980769230769	C1_20,C2_51	C1_15,C2_1	Yes
ENSG00000151092	NGLY1	chr3:25770781-25775391	-	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,165,29	25770809,25773810,25773974,25775363	No	No	No	bcc_52865|Cycle_1|Type_1	28,29	25770809,25775363	psi1:0.619047619048,psi2:1.0	C1_13,C2_31	C1_8,C2_0	Yes
ENSG00000141367	CLTC	chr17:57763140-57768023	+	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,21,27	57763169,57764362,57764382,57767997	No	No	No	bcc_41723|Cycle_0|Type_1	29,27	57763169,57767997	psi1:0.45045045045,psi2:0	C1_100,C2_0	C1_122,C2_179	Yes
ENSG00000177879	AP3S1	chr5:115238658-115249087	+	ES	41	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,41,29	115238689,115242518,115242558,115249059	No	No	No	bcc_31595|Cycle_0|Type_1	31,29	115238689,115249059	psi1:0.5,psi2:0	C1_52,C2_0	C1_52,C2_60	Yes
ENSG00000110075	PPP6R3	chr11:68343481-68355424	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,87,30	68343511,68350511,68350597,68355395	No	No	No	bcc_55477|Cycle_0|Type_1	30,30	68343511,68355395	psi1:0.916666666667,psi2:0.444444444444	C1_11,C2_4	C1_1,C2_5	Yes
ENSG00000077147	TM9SF3	chr10:98280334-98280399	-	deletion	3	No	-	protein_coding	no_known_ss	65	98280334	No	No	No	bcc_12470|Cycle_0|Type_1	31,31	98280365,98280369	psi1:0.51724137931,psi2:0	C1_15,C2_0	C1_14,C2_15	-
ENSG00000168259	DNAJC7	chr17:40128759-40129309	+	IR	490	Yes	Yes	protein_coding	no_known_ss	550	-	No	No	No	bcc_9389|Cycle_0|Type_1	29,31	40128788,40129279	psi1:0.90284592738,psi2:0.149253731343	C1_920,C2_10	C1_99,C2_57	(CT:40128788,AC:40129279)
ENSG00000127241	MASP1	chr3:187003772-187009445	-	altA	43	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):187009416,187003844	72,30	187003844,187009416	No	No	No	bcc_41139|Cycle_0|Type_1	29,30	187003801,187009416	psi1:0.666666666667,psi2:1.0	C1_4,C2_16	C1_2,C2_0	Yes
ENSG00000165169	DYNLT3	chrX:37699266-37699328	+	deletion	3	No	-	protein_coding	no_known_ss	62	37699266	No	No	No	bcc_38643|Cycle_0|Type_1	28,31	37699294,37699298	psi1:0.5625,psi2:1.0	C1_9,C2_14	C1_7,C2_0	-
ENSG00000137478	FCHSD2	chr11:72712152-72794769	-	ES	77	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,77,30	72712179,72726854,72726930,72794740	No	No	No	bcc_57189|Cycle_0|Type_1	27,30	72712179,72794740	psi1:1.0,psi2:0.666666666667	C1_31,C2_8	C1_0,C2_4	Yes
ENSG00000100416	TRMU	chr22:46742410-46746276	+	altA	59	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,89	46742441,46746188	No	No	No	bcc_65062|Cycle_0|Type_1	31,30	46742441,46746247	psi1:0.625,psi2:1.0	C1_5,C2_12	C1_3,C2_0	Yes
ENSG00000234741	GAS5	chr1:173834391-173834636	-	IR	188	Yes	-	processed_transcript	no_known_ss	245	-	No	Yes	No	bcc_2642|Cycle_0|Type_1	29,28	173834420,173834609	psi1:0.122807017544,psi2:0.647058823529	C1_7,C2_11	C1_50,C2_6	Yes
ENSG00000111832	RWDD1	chr6:116892787-116901486	+	ES	114	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,114,29	116892818,116895221,116895334,116901458	No	Yes	No	bcc_43365|Cycle_0|Type_1	31,29	116892818,116901458	psi1:0.769230769231,psi2:0.238095238095	C1_30,C2_5	C1_9,C2_16	Yes
ENSG00000106554	CHCHD3	chr7:132570474-132659958	-	altD	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,45	132570505,132659914	No	No	No	bcc_55722|Cycle_0|Type_1	31,30	132570505,132659929	psi1:0.357142857143,psi2:0	C1_5,C2_0	C1_9,C2_25	Yes
ENSG00000180694	TMEM64	chr8:91638060-91657365	-	ES	156	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,156,27	91638090,91643780,91643935,91657339	No	No	No	bcc_34372|Cycle_0|Type_1	30,27	91638090,91657339	psi1:0.666666666667,psi2:1.0	C1_8,C2_29	C1_4,C2_0	Yes
ENSG00000122705	CLTA	chr9:36204147-36211630	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,54,31	36204176,36209264,36209317,36211600	No	Yes	No	bcc_54892|Cycle_2|Type_1	29,31	36204176,36211600	psi1:0.545454545455,psi2:0	C1_120,C2_0	C1_100,C2_91	Yes
ENSG00000163110	PDLIM5	chr4:95497154-95506745	+	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,18,30	95497185,95506137,95506154,95506716	No	No	No	bcc_3330|Cycle_0|Type_1	31,30	95497185,95506716	psi1:0.571428571429,psi2:0	C1_8,C2_0	C1_6,C2_5	Yes
ENSG00000115464	USP34	chr2:61420085-61431662	-	ES_MULTI	249	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,124,125,31	61420115,61430275,61430398,61431391,61431515,61431632	No	No	No	bcc_40172|Cycle_1|Type_1	30,31	61420115,61431632	psi1:0.46875,psi2:0.923076923077	C1_15,C2_48	C1_17,C2_4	Yes
ENSG00000108963	DPH1	chr17:1939917-1940158	+	altD	33	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	63,30	1939980,1940129	No	No	No	bcc_66424|Cycle_0|Type_1	30,30	1939947,1940129	psi1:0.428571428571,psi2:0.9	C1_3,C2_9	C1_4,C2_1	Yes
ENSG00000229117	RPL41	chr12:56510616-56511269	+	altD	67	Yes	Yes	protein_coding	4_ss_annotated_(over_5_ss):56510714,56510995,56510973,56511266	98,23,4	56510714,56510973,56510995,56511266	No	No	No	bcc_51078|Cycle_0|Type_1	31,23,4	56510647,56510973,56510995,56511266	psi1:0,psi2:0.583333333333	C1_0,C2_7	C1_4,C2_5	(GT:56510995,AG:56511266);(GC:56510647,AG:56510973);(GT:56510714,AG:56510973)
ENSG00000203485	INF2	chr14:105181162-105185159	+	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,57,28	105181193,105181621,105181677,105185132	No	No	No	bcc_55107|Cycle_0|Type_1	31,28	105181193,105185132	psi1:0.545454545455,psi2:0.972972972973	C1_18,C2_36	C1_15,C2_1	Yes
ENSG00000088387	DOCK9	chr13:99446972-99449399	-	ES	8	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,8,31	99447002,99448460,99448467,99449369	No	No	No	bcc_20971|Cycle_0|Type_1	30,31	99447002,99449369	psi1:0.59375,psi2:0	C1_19,C2_0	C1_13,C2_10	Yes
ENSG00000076864	RAP1GAP	chr1:21929375-21932586	-	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,78,28	21929406,21930328,21930405,21932559	No	No	No	bcc_58878|Cycle_0|Type_1	31,28	21929406,21932559	psi1:0.6875,psi2:0	C1_11,C2_0	C1_5,C2_3	Yes
ENSG00000062598	ELMO2	chr20:45023112-45035217	-	ES_altA	104	Yes	-	protein_coding	all_splice_sites_known_(5_ss)	59,75,31	45023171,45027336,45027410,45035187	No	Yes	No	bcc_57171|Cycle_0|Type_1	30,31	45023142,45035187	psi1:0.904761904762,psi2:0.333333333333	C1_19,C2_1	C1_2,C2_2	Yes
ENSG00000154310	TNIK	chr3:170819391-170825884	-	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,24,31	170819422,170824972,170824995,170825854	No	No	No	bcc_55630|Cycle_0|Type_1	31,31	170819422,170825854	psi1:0.714285714286,psi2:0.2	C1_5,C2_1	C1_2,C2_4	Yes
ENSG00000099260	PALMD	chr1:100155209-100155273	+	deletion	3	No	Yes	protein_coding	no_known_ss	64	100155209	No	No	No	bcc_48389|Cycle_0|Type_1	30,31	100155239,100155243	psi1:1.0,psi2:0.571428571429	C1_6,C2_4	C1_0,C2_3	-
ENSG00000101247	NDUFAF5	chr20:13789517-13797136	+	ES	98	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,98,28	13789548,13795064,13795161,13797109	No	No	No	bcc_60012|Cycle_0|Type_1	31,28	13789548,13797109	psi1:0.578947368421,psi2:0.0526315789474	C1_22,C2_1	C1_16,C2_18	Yes
ENSG00000168291	PDHB	chr3:58413877-58414228	-	IR	293	Yes	Yes	protein_coding	no_known_ss	351	-	No	No	No	bcc_21639|Cycle_0|Type_1	29,29	58413906,58414200	psi1:0.663551401869,psi2:0.150684931507	C1_71,C2_11	C1_36,C2_62	Yes
ENSG00000198836	OPA1	chr3:193336695-193349428	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,111,28	193336725,193343881,193343991,193349401	No	No	No	bcc_37754|Cycle_0|Type_1	30,28	193336725,193349401	psi1:0.448275862069,psi2:0.923076923077	C1_13,C2_24	C1_16,C2_2	Yes
ENSG00000140538	NTRK3	chr15:88522663-88576117	-	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,135,30	88522694,88524457,88524591,88576088	No	No	No	bcc_70118|Cycle_0|Type_1	31,30	88522694,88576088	psi1:0.764705882353,psi2:0	C1_13,C2_0	C1_4,C2_2	Yes
ENSG00000004487	KDM1A	chr1:23385630-23395062	+	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,12,31	23385660,23392553,23392564,23395032	No	No	No	bcc_55059|Cycle_0|Type_1	30,31	23385660,23395032	psi1:0.564102564103,psi2:0	C1_22,C2_0	C1_17,C2_14	Yes
ENSG00000214655	ZSWIM8	chr10:75559897-75560084	+	altD	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	55,31	75559952,75560054	No	No	No	bcc_63003|Cycle_0|Type_1	31,31	75559928,75560054	psi1:0,psi2:0.56	C1_0,C2_14	C1_9,C2_11	Yes
ENSG00000169925	BRD3	chr9:136899917-136901182	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):136901154,136899951	34,29	136899951,136901154	No	No	No	bcc_66252|Cycle_0|Type_1	31,29	136899948,136901154	psi1:0.333333333333,psi2:0.833333333333	C1_2,C2_10	C1_4,C2_2	Yes
ENSG00000064933	PMS1	chr2:190660648-190682771	+	ES	103	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,103,29	190660677,190670378,190670480,190682743	No	No	No	bcc_62991|Cycle_0|Type_1	29,29	190660677,190682743	psi1:1.0,psi2:0.6	C1_5,C2_3	C1_0,C2_2	Yes
ENSG00000112249	ASCC3	chr6:100957378-100957900	-	altD	65	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):100957808,100957409	31,93	100957409,100957808	No	No	No	bcc_45192|Cycle_0|Type_1	31,28	100957409,100957873	psi1:0.666666666667,psi2:1.0	C1_6,C2_18	C1_3,C2_0	Yes
ENSG00000237813	AC002066.1	chr7:115897897-115897960	-	deletion	3	No	-	antisense	no_known_ss	63	115897897	No	No	No	bcc_4314|Cycle_0|Type_1	29,31	115897926,115897930	psi1:1.0,psi2:0.25	C1_2,C2_4	C1_0,C2_12	-
ENSG00000058799	YIPF1	chr1:54317912-54325759	-	ES	51	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,51,31	54317943,54320674,54320724,54325729	No	No	No	bcc_50693|Cycle_0|Type_1	31,31	54317943,54325729	psi1:0.166666666667,psi2:0.810810810811	C1_1,C2_30	C1_5,C2_7	Yes
ENSG00000135317	SNX14	chr6:86246612-86251733	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,27,31	86246642,86248556,86248582,86251703	No	No	No	bcc_35623|Cycle_0|Type_1	30,31	86246642,86251703	psi1:0.852941176471,psi2:0.357142857143	C1_29,C2_5	C1_5,C2_9	Yes
ENSG00000137822	TUBGCP4	chr15:43695967-43696639	-	IR	613	Yes	Yes	protein_coding	no_known_ss	672	-	No	No	No	bcc_819|Cycle_0|Type_1	30,29	43695997,43696611	psi1:0.993464052288,psi2:0.666666666667	C1_152,C2_8	C1_1,C2_4	(AG:43696611,GT:43695997)
ENSG00000065361	ERBB3	chr12:56489063-56489478	-	IR	354	No	Yes	protein_coding	no_known_ss	415	-	No	No	No	bcc_16355|Cycle_0|Type_1	31,30	56489094,56489449	psi1:0.714285714286,psi2:0.111111111111	C1_25,C2_1	C1_10,C2_8	(AG:56489449,GT:56489094)
ENSG00000112983	BRD8	chr5:137492925-137495786	-	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,29	137492956,137495244,137495288,137495758	No	No	No	bcc_39594|Cycle_0|Type_1	31,29	137492956,137495758	psi1:0.869565217391,psi2:0.375	C1_20,C2_3	C1_3,C2_5	Yes
ENSG00000196586	MYO6	chr6:76618313-76623810	+	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,31	76618344,76621389,76621415,76623780	No	No	No	bcc_35017|Cycle_0|Type_1	31,31	76618344,76623780	psi1:0.787878787879,psi2:0.222222222222	C1_26,C2_2	C1_7,C2_7	Yes
ENSG00000173230	GOLGB1	chr3:121386975-121388088	-	altD	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,45	121387005,121388044	No	No	No	bcc_2745|Cycle_0|Type_1	30,30	121387005,121388059	psi1:0.428571428571,psi2:0.037037037037	C1_3,C2_1	C1_4,C2_26	Yes
ENSG00000154114	TBCEL	chr11:120918345-120924367	+	altA	79	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,108	120918376,120924260	No	No	No	bcc_58238|Cycle_0|Type_1	31,29	120918376,120924339	psi1:0.625,psi2:1.0	C1_5,C2_9	C1_3,C2_0	Yes
ENSG00000138101	DTNB	chr2:25611199-25650433	-	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,21,30	25611230,25642384,25642404,25650404	No	No	No	bcc_55705|Cycle_0|Type_1	31,30	25611230,25650404	psi1:0.642857142857,psi2:0	C1_9,C2_0	C1_5,C2_3	Yes
ENSG00000120254	MTHFD1L	chr6:151206839-151209009	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	151206870,151208978	No	No	No	bcc_22187|Cycle_0|Type_1	31,29	151206870,151208981	psi1:0.4,psi2:1.0	C1_6,C2_4	C1_9,C2_0	Yes
ENSG00000110841	PPFIBP1	chr12:27809633-27813847	+	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,33,31	27809663,27811749,27811781,27813817	No	No	No	bcc_53940|Cycle_0|Type_1	30,31	27809663,27813817	psi1:0.555555555556,psi2:0.1	C1_5,C2_1	C1_4,C2_9	Yes
ENSG00000144357	UBR3	chr2:170863669-170865344	+	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	43,31	170863712,170865314	No	No	No	bcc_34284|Cycle_0|Type_1	31,31	170863700,170865314	psi1:0.157894736842,psi2:0.636363636364	C1_3,C2_7	C1_16,C2_4	Yes
ENSG00000112531	QKI	chr6:163984722-163987780	+	altA	775	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,803	163984751,163986978	No	Yes	No	bcc_705|Cycle_8|Type_1	29,28	163984751,163987753	psi1:0.998756218905,psi2:0.717391304348	C1_1606,C2_33	C1_2,C2_13	Yes
ENSG00000227372	TP73-AS1	chr1:3656269-3656394	-	IR	68	Yes	-	antisense	no_known_ss	125	-	No	Yes	No	bcc_69368|Cycle_591|Type_1	26,31	3656295,3656364	psi1:0.714285714286,psi2:0	C1_10,C2_0	C1_4,C2_2	Yes
ENSG00000173715	C11orf80	chr11:66595805-66605866	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,29	66595835,66605838	No	No	No	bcc_67129|Cycle_0|Type_1	30,26	66595835,66605841	psi1:0.285714285714,psi2:1.0	C1_2,C2_1	C1_5,C2_0	Yes
ENSG00000133103	COG6	chr13:40293436-40293499	-	deletion	3	No	Yes	protein_coding	no_known_ss	63	40293436	No	No	No	bcc_32679|Cycle_0|Type_1	29,31	40293465,40293469	psi1:1.0,psi2:0.571428571429	C1_5,C2_4	C1_0,C2_3	-
ENSG00000102796	DHRS12	chr13:52365364-52373700	-	ES	83	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,83,31	52365393,52371962,52372044,52373670	No	No	No	bcc_65030|Cycle_0|Type_1	29,31	52365393,52373670	psi1:1.0,psi2:0.636363636364	C1_13,C2_7	C1_0,C2_4	Yes
ENSG00000164576	SAP30L	chr5:153830742-153832990	+	ES	44	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,44,29	153830773,153832016,153832059,153832962	No	No	No	bcc_50183|Cycle_1|Type_1	31,29	153830773,153832962	psi1:0.4,psi2:0	C1_6,C2_0	C1_9,C2_13	Yes
ENSG00000183077	AFMID	chr17:76198801-76201549	+	ES_MULTI	257	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,86,73,98,29	76198832,76200737,76200822,76200909,76200981,76201174,76201271,76201521	No	Yes	No	bcc_3143|Cycle_118|Type_1	31,29	76198832,76201521	psi1:0.5,psi2:0.984848484848	C1_1,C2_65	C1_1,C2_1	Yes
ENSG00000169744	LDB2	chr4:16504465-16510193	-	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,36	16504496,16510158	No	No	No	bcc_37976|Cycle_1|Type_1	31,30	16504496,16510164	psi1:0.763157894737,psi2:0	C1_29,C2_0	C1_9,C2_4	Yes
ENSG00000163577	EIF5A2	chr3:170611177-170624808	-	ES	132	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,132,31	170611208,170612081,170612212,170624778	No	No	No	bcc_58052|Cycle_1|Type_1	31,31	170611208,170624778	psi1:1.0,psi2:0.7	C1_25,C2_7	C1_0,C2_3	Yes
ENSG00000061676	NCKAP1	chr2:183888617-183902750	-	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,18,31	183888644,183889706,183889723,183902720	No	No	No	bcc_43977|Cycle_0|Type_1	27,31	183888644,183902720	psi1:0.5625,psi2:0	C1_9,C2_0	C1_7,C2_5	Yes
ENSG00000138757	G3BP2	chr4:76573896-76580280	-	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,99,31	76573925,76579167,76579265,76580250	No	No	No	bcc_30551|Cycle_0|Type_1	29,31	76573925,76580250	psi1:0.746031746032,psi2:0.142857142857	C1_94,C2_4	C1_32,C2_24	Yes
ENSG00000134313	KIDINS220	chr2:8877098-8890272	-	ES	114	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,114,31	8877129,8888017,8888130,8890242	No	No	No	bcc_36107|Cycle_0|Type_1	31,31	8877129,8890242	psi1:0.555555555556,psi2:1.0	C1_10,C2_11	C1_8,C2_0	Yes
ENSG00000273432	RP5-1165K10.2	chr7:43995488-43995549	+	deletion	3	No	-	processed_transcript	no_known_ss	61	43995488	No	No	No	bcc_55350|Cycle_0|Type_1	27,31	43995515,43995519	psi1:1.0,psi2:0.7	C1_24,C2_7	C1_0,C2_3	-
ENSG00000204790	CBWD6	chr9:69240029-69245971	-	ES	88	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,88,31	69240059,69245076,69245163,69245941	Yes	Yes	No	bcc_11222|Cycle_8|Type_1	30,31	69240059,69245941	psi1:0.772727272727,psi2:0.292682926829	C1_34,C2_12	C1_10,C2_29	Yes
ENSG00000147996	CBWD5	chr9:70467500-70473467	-	ES	88	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,88,31	70467530,70472572,70472659,70473437	Yes	Yes	No	bcc_11222|Cycle_8|Type_1	30,31	70467530,70473437	psi1:0.772727272727,psi2:0.292682926829	C1_34,C2_12	C1_10,C2_29	Yes
ENSG00000196873	CBWD3	chr9:70873454-70879413	+	ES	88	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,88,30	70873485,70874263,70874350,70879384	Yes	Yes	No	bcc_11222|Cycle_8|Type_1	31,30	70873485,70879384	psi1:0.772727272727,psi2:0.292682926829	C1_34,C2_12	C1_10,C2_29	Yes
ENSG00000215126	CBWD7	chr9:42673497-42679464	+	ES	88	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,88,30	42673528,42674306,42674393,42679435	Yes	Yes	No	bcc_11222|Cycle_8|Type_1	31,30	42673528,42679435	psi1:0.772727272727,psi2:0.292682926829	C1_34,C2_12	C1_10,C2_29	Yes
ENSG00000168958	MFF	chr2:228205065-228220423	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,60,31	228205096,228217230,228217289,228220393	No	Yes	No	bcc_45905|Cycle_1|Type_1	31,31	228205096,228220393	psi1:0.717948717949,psi2:0.235294117647	C1_28,C2_12	C1_11,C2_39	Yes
ENSG00000198682	PAPSS2	chr10:89475569-89487069	+	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,15,29	89475600,89481513,89481527,89487041	No	No	No	bcc_28048|Cycle_0|Type_1	31,29	89475600,89487041	psi1:0,psi2:0.75	C1_0,C2_27	C1_4,C2_9	Yes
ENSG00000157326	DHRS4	chr14:24424390-24435000	+	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,102,30	24424421,24429111,24429212,24434971	No	Yes	No	bcc_47846|Cycle_8|Type_1	31,30	24424421,24434971	psi1:0.75,psi2:1.0	C1_6,C2_67	C1_2,C2_0	Yes
ENSG00000135597	REPS1	chr6:139242230-139251144	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,81,31	139242261,139247538,139247618,139251114	No	No	No	bcc_50958|Cycle_0|Type_1	31,31	139242261,139251114	psi1:0.777777777778,psi2:0.28125	C1_14,C2_9	C1_4,C2_23	Yes
ENSG00000111011	RSRC2	chr12:123003547-123005081	-	altA	22	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	51,31	123003598,123005051	No	Yes	No	bcc_41940|Cycle_2|Type_1	29,31	123003576,123005051	psi1:0.571428571429,psi2:0	C1_4,C2_0	C1_3,C2_2	Yes
ENSG00000118705	RPN2	chr20:35865081-35869735	+	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,48,30	35865112,35866805,35866852,35869706	No	No	No	bcc_6539|Cycle_0|Type_1	31,30	35865112,35869706	psi1:0.666666666667,psi2:0.0765432098765	C1_22,C2_31	C1_11,C2_374	Yes
ENSG00000132604	TERF2	chr16:69404441-69406200	-	altA	63	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):69406172,69404532	91,29	69404532,69406172	No	No	No	bcc_26254|Cycle_0|Type_1	28,29	69404469,69406172	psi1:1.0,psi2:0.727272727273	C1_40,C2_8	C1_0,C2_3	Yes
ENSG00000116288	PARK7	chr1:8021765-8022852	+	altD	58	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	88,30	8021853,8022823	No	No	No	bcc_41611|Cycle_1|Type_1	30,30	8021795,8022823	psi1:0.902777777778,psi2:0.466666666667	C1_65,C2_28	C1_7,C2_32	Yes
ENSG00000170144	HNRNPA3	chr2:178077503-178080293	+	altD	66	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	96,27	178077599,178080267	No	No	No	bcc_13809|Cycle_0|Type_1	30,27	178077533,178080267	psi1:0.21875,psi2:0.705882352941	C1_7,C2_12	C1_25,C2_5	Yes
ENSG00000170271	FAXDC2	chr5:154210452-154214432	-	ES	104	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,104,30	154210482,154214185,154214288,154214403	No	No	No	bcc_25850|Cycle_0|Type_1	30,30	154210482,154214403	psi1:1.0,psi2:0.7	C1_107,C2_35	C1_0,C2_15	Yes
ENSG00000188092	GPR89B	chr1:147415628-147416141	+	altA	20	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,51	147415658,147416091	Yes	No	No	bcc_50856|Cycle_0|Type_1	30,31	147415658,147416111	psi1:0.368421052632,psi2:0	C1_7,C2_0	C1_12,C2_19	Yes
ENSG00000117262	GPR89A	chr1:145811412-145811925	-	altA	20	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	51,30	145811463,145811896	Yes	No	No	bcc_50856|Cycle_0|Type_1	31,30	145811443,145811896	psi1:0.368421052632,psi2:0	C1_7,C2_0	C1_12,C2_19	Yes
ENSG00000129197	RPAIN	chr17:5326118-5335891	+	ES_MULTI	317	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,112,64,141,30	5326149,5329291,5329402,5329556,5329619,5331391,5331531,5335862	No	Yes	No	bcc_37873|Cycle_0|Type_1	31,30	5326149,5335862	psi1:0.645161290323,psi2:0.983606557377	C1_20,C2_60	C1_11,C2_1	Yes
ENSG00000092148	HECTD1	chr14:31598483-31602472	-	altA	141	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	171,29	31598654,31602444	No	Yes	No	bcc_38849|Cycle_1|Type_1	30,29	31598513,31602444	psi1:0.954545454545,psi2:0.545454545455	C1_21,C2_12	C1_1,C2_10	Yes
ENSG00000082397	EPB41L3	chr18:5397396-5406805	-	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,123,30	5397425,5398020,5398142,5406776	No	Yes	No	bcc_40307|Cycle_1|Type_1	29,30	5397425,5406776	psi1:0.891304347826,psi2:0	C1_123,C2_0	C1_15,C2_5	Yes
ENSG00000114209	PDCD10	chr3:167438031-167452624	-	ES	73	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,73,31	167438061,167443189,167443261,167452594	No	No	No	bcc_45295|Cycle_0|Type_1	30,31	167438061,167452594	psi1:0.803921568627,psi2:0.294117647059	C1_41,C2_5	C1_10,C2_12	Yes
ENSG00000183077	AFMID	chr17:76201568-76202057	+	ES	136	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,136,31	76201599,76201684,76201819,76202027	No	Yes	No	bcc_3143|Cycle_116|Type_1	31,31	76201599,76202027	psi1:0.5,psi2:0.971428571429	C1_2,C2_68	C1_2,C2_2	Yes
ENSG00000167491	GATAD2A	chr19:19612195-19613167	+	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,75,28	19612225,19612778,19612852,19613140	No	No	No	bcc_59036|Cycle_0|Type_1	30,28	19612225,19613140	psi1:0.666666666667,psi2:1.0	C1_6,C2_12	C1_3,C2_0	Yes
ENSG00000117335	CD46	chr1:207941138-207956664	+	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,42,28	207941168,207943666,207943707,207956637	No	Yes	No	bcc_44291|Cycle_0|Type_1	30,28	207941168,207956637	psi1:0.740740740741,psi2:1.0	C1_20,C2_120	C1_7,C2_0	Yes
ENSG00000115604	IL18R1	chr2:103003429-103006547	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):103006516,103003460	31,32	103003460,103006516	No	No	No	bcc_71855|Cycle_0|Type_1	31,29	103003460,103006519	psi1:1.0,psi2:0.333333333333	C1_1,C2_2	C1_0,C2_4	Yes
ENSG00000123908	AGO2	chr8:141542684-141549448	-	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,102,30	141542714,141545567,141545668,141549419	No	No	No	bcc_69586|Cycle_0|Type_1	30,30	141542714,141549419	psi1:1.0,psi2:0.666666666667	C1_8,C2_4	C1_0,C2_2	Yes
ENSG00000135870	RC3H1	chr1:173907981-173910433	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	173908012,173910403	No	No	No	bcc_61863|Cycle_0|Type_1	28,31	173908009,173910403	psi1:0.333333333333,psi2:1.0	C1_2,C2_1	C1_4,C2_0	Yes
ENSG00000271092	TMEM56-RWDD3	chr1:95712022-95712089	-	deletion	8	Yes	-	protein_coding	no_known_ss	67	95712022	No	No	No	bcc_46207|Cycle_0|Type_1	28,31	95712050,95712059	psi1:0.333333333333,psi2:1.0	C1_2,C2_1	C1_4,C2_0	-
ENSG00000126777	KTN1	chr14:56139699-56142582	+	ES	84	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,84,30	56139730,56139890,56139973,56142553	No	No	No	bcc_29726|Cycle_4|Type_1	31,30	56139730,56142553	psi1:0.148148148148,psi2:0.612244897959	C1_12,C2_60	C1_69,C2_38	Yes
ENSG00000182196	ARL6IP4	chr12:123465782-123466170	+	altAD	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	64,53	123465846,123466118	No	Yes	No	bcc_899|Cycle_18|Type_1	31,29	123465813,123466142	psi1:0.120879120879,psi2:0.586206896552	C1_11,C2_17	C1_80,C2_12	Yes
ENSG00000179630	LACC1	chr13:44463087-44465613	+	ES	161	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,161,29	44463118,44464250,44464410,44465585	No	No	No	bcc_31883|Cycle_0|Type_1	31,29	44463118,44465585	psi1:1.0,psi2:0.714285714286	C1_17,C2_5	C1_0,C2_2	Yes
ENSG00000108669	CYTH1	chr17:76688545-76694380	-	ES	3	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,3,30	76688575,76692089,76692091,76694351	No	No	No	bcc_34129|Cycle_0|Type_1	30,30	76688575,76694351	psi1:0.963414634146,psi2:0.588235294118	C1_79,C2_10	C1_3,C2_7	Yes
ENSG00000005955	GGNBP2	chr17:34934586-34935705	+	altD	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):34934616,34935675	36,31	34934622,34935675	No	No	No	bcc_33240|Cycle_0|Type_1	30,31	34934616,34935675	psi1:0.55,psi2:0	C1_22,C2_0	C1_18,C2_12	Yes
ENSG00000133884	DPF2	chr11:65111509-65113167	+	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,42,31	65111540,65112051,65112092,65113137	No	No	No	bcc_21701|Cycle_0|Type_1	31,31	65111540,65113137	psi1:0.55,psi2:0	C1_11,C2_0	C1_9,C2_6	Yes
ENSG00000099204	ABLIM1	chr10:116205132-116211413	-	ES	141	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,141,31	116205162,116207639,116207779,116211383	No	No	No	bcc_17371|Cycle_0|Type_1	30,31	116205162,116211383	psi1:0.541666666667,psi2:1.0	C1_13,C2_12	C1_11,C2_0	Yes
ENSG00000082397	EPB41L3	chr18:5397396-5406805	-	ES_MULTI	198	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,123,75,30	5397425,5398020,5398142,5400968,5401042,5406776	No	Yes	No	bcc_40307|Cycle_2|Type_1	29,30	5397425,5406776	psi1:0.875,psi2:0	C1_105,C2_0	C1_15,C2_5	Yes
ENSG00000087274	ADD1	chr4:2927808-2929928	+	ES	34	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,34,31	2927839,2928369,2928402,2929898	No	No	No	bcc_54281|Cycle_0|Type_1	31,31	2927839,2929898	psi1:0.585585585586,psi2:0.0526315789474	C1_65,C2_2	C1_46,C2_36	Yes
ENSG00000061987	MON2	chr12:62959129-62960131	+	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,18,30	62959160,62959794,62959811,62960102	No	No	No	bcc_46418|Cycle_0|Type_1	31,30	62959160,62960102	psi1:0.333333333333,psi2:0.8	C1_2,C2_8	C1_4,C2_2	Yes
ENSG00000164329	PAPD4	chr5:78919147-78936702	+	altD	134	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):78919312,78936674	165,29	78919312,78936674	No	No	No	bcc_36369|Cycle_0|Type_1	31,29	78919178,78936674	psi1:0.714285714286,psi2:1.0	C1_10,C2_32	C1_4,C2_0	Yes
ENSG00000254559	RP11-304M2.5	chr11:204493-204560	-	deletion	6	No	-	antisense	no_known_ss	67	204493	No	No	No	bcc_55563|Cycle_0|Type_1	30,31	204523,204530	psi1:0.214285714286,psi2:0.703703703704	C1_3,C2_19	C1_11,C2_8	-
ENSG00000127990	SGCE	chr7:94228244-94229988	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,31	94228275,94229009,94229035,94229958	No	No	No	bcc_57486|Cycle_0|Type_1	31,31	94228275,94229958	psi1:0.5,psi2:1.0	C1_21,C2_16	C1_21,C2_0	Yes
ENSG00000119684	MLH3	chr14:75513227-75513290	+	deletion	6	No	Yes	protein_coding	no_known_ss	63	75513227	No	No	No	bcc_59844|Cycle_0|Type_1	26,31	75513253,75513260	psi1:1.0,psi2:0.666666666667	C1_11,C2_6	C1_0,C2_3	-
ENSG00000138443	ABI2	chr2:204260472-204267326	+	ES	183	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,183,28	204260503,204261508,204261690,204267299	No	No	No	bcc_7220|Cycle_0|Type_1	31,28	204260503,204267299	psi1:0.80701754386,psi2:0	C1_46,C2_0	C1_11,C2_4	Yes
ENSG00000103266	STUB1	chr16:732045-732193	-	IR	88	Yes	Yes	protein_coding	no_known_ss	148	-	No	No	No	bcc_45275|Cycle_0|Type_1	31,29	732076,732165	psi1:0.290909090909,psi2:0.761363636364	C1_16,C2_67	C1_39,C2_21	(AG:732165,GT:732076)
ENSG00000185630	PBX1	chr1:164781357-164790803	+	ES	113	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,113,30	164781386,164789309,164789421,164790774	No	No	No	bcc_2040|Cycle_0|Type_1	29,30	164781386,164790774	psi1:0.914285714286,psi2:0.333333333333	C1_32,C2_1	C1_3,C2_2	Yes
ENSG00000197217	ENTPD4	chr8:23297397-23299135	-	altD	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,54	23297428,23299082	No	No	No	bcc_55965|Cycle_0|Type_1	31,30	23297428,23299106	psi1:0.25,psi2:1.0	C1_5,C2_2	C1_15,C2_0	Yes
ENSG00000138592	USP8	chr15:50774231-50782028	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,87,31	50774262,50776472,50776558,50781998	No	No	No	bcc_1727|Cycle_0|Type_1	31,31	50774262,50781998	psi1:0.428571428571,psi2:1.0	C1_15,C2_9	C1_20,C2_0	Yes
ENSG00000090372	STRN4	chr19:47230774-47231181	-	altA	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	50,31	47230824,47231151	No	No	No	bcc_50177|Cycle_0|Type_1	29,31	47230803,47231151	psi1:0.769230769231,psi2:0.25	C1_10,C2_1	C1_3,C2_3	Yes
ENSG00000013561	RNF14	chr5:141353276-141362974	+	ES	229	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,229,30	141353307,141359688,141359916,141362945	No	Yes	No	bcc_50866|Cycle_13|Type_1	31,30	141353307,141362945	psi1:0.658536585366,psi2:1.0	C1_27,C2_44	C1_14,C2_0	Yes
ENSG00000204852	TCTN1	chr12:111085075-111085584	+	altD	36	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):111085554,111085141	66,31	111085141,111085554	No	No	No	bcc_53926|Cycle_0|Type_1	30,31	111085105,111085554	psi1:0.642857142857,psi2:1.0	C1_9,C2_13	C1_5,C2_0	Yes
ENSG00000100209	HSCB	chr22:29138289-29147258	+	ES_MULTI	332	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	30,97,90,145,30	29138319,29139870,29139966,29140603,29140692,29141852,29141996,29147229	No	Yes	No	bcc_9057|Cycle_3|Type_1	30,30	29138319,29147229	psi1:0.730769230769,psi2:1.0	C1_19,C2_68	C1_7,C2_0	Yes
ENSG00000139793	MBNL2	chr13:98009858-98043603	+	ES	95	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,95,28	98009889,98018713,98018807,98043576	No	Yes	No	bcc_38902|Cycle_0|Type_1	31,28	98009889,98043576	psi1:0.807692307692,psi2:0.342105263158	C1_21,C2_13	C1_5,C2_25	Yes
ENSG00000183077	AFMID	chr17:76198801-76202057	+	ES_MULTI	159	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,86,73,31	76198832,76200737,76200822,76200909,76200981,76202027	No	Yes	No	bcc_3143|Cycle_113|Type_1	31,31	76198832,76202027	psi1:0,psi2:0.707692307692	C1_0,C2_46	C1_8,C2_19	Yes
ENSG00000132680	KIAA0907	chr1:155891287-155891682	-	altA	104	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):155891419,155891652	132,31	155891419,155891652	No	No	No	bcc_60574|Cycle_0|Type_1	28,31	155891315,155891652	psi1:1.0,psi2:0.666666666667	C1_10,C2_6	C1_0,C2_3	Yes
ENSG00000139719	VPS33A	chr12:122714285-122714376	+	deletion	30	No	-	protein_coding	no_known_ss	91	122714285	No	No	No	bcc_59941|Cycle_0|Type_1	30,31	122714315,122714346	psi1:1.0,psi2:0.666666666667	C1_10,C2_6	C1_0,C2_3	-
ENSG00000147676	MAL2	chr8:120256803-120256873	-	deletion	8	Yes	-	protein_coding	no_known_ss	70	120256803	No	No	No	bcc_36206|Cycle_0|Type_1	31,31	120256834,120256843	psi1:0.666666666667,psi2:1.0	C1_20,C2_33	C1_10,C2_0	-
ENSG00000006125	AP2B1	chr17:33984779-33998803	+	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,42,31	33984810,33997876,33997917,33998773	No	Yes	Yes	bcc_41349|Cycle_6|Type_1	31,31	33984810,33998773	psi1:0.852459016393,psi2:0.333333333333	C1_52,C2_4	C1_9,C2_8	Yes
ENSG00000158773	USF1	chr1:161011976-161012404	-	altD	31	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,60	161012007,161012345	No	No	No	bcc_43264|Cycle_0|Type_1	31,29	161012007,161012376	psi1:0.857142857143,psi2:0.411764705882	C1_12,C2_7	C1_2,C2_10	Yes
ENSG00000128641	MYO1B	chr2:192265164-192272869	+	ES_MULTI	174	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,87,87,29	192265194,192265475,192265561,192267358,192267444,192272841	No	Yes	No	bcc_10838|Cycle_2|Type_1	30,29	192265194,192272841	psi1:0.954545454545,psi2:0.313432835821	C1_21,C2_42	C1_1,C2_92	Yes
ENSG00000088833	NSFL1C	chr20:1435748-1438874	-	ES	6	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,6,30	1435777,1436359,1436364,1438845	No	No	No	bcc_3639|Cycle_0|Type_1	29,30	1435777,1438845	psi1:0.56862745098,psi2:0.117647058824	C1_29,C2_4	C1_22,C2_30	Yes
ENSG00000157637	SLC38A10	chr17:79219473-79219534	-	deletion	3	No	Yes	protein_coding	no_known_ss	61	79219473	No	No	No	bcc_56912|Cycle_0|Type_1	27,31	79219500,79219504	psi1:1.0,psi2:0.333333333333	C1_4,C2_9	C1_0,C2_18	-
ENSG00000100711	ZFYVE21	chr14:104195488-104198985	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,29	104195519,104196130,104196183,104198957	No	No	No	bcc_60227|Cycle_0|Type_1	31,29	104195519,104198957	psi1:0.65625,psi2:0	C1_21,C2_0	C1_11,C2_5	Yes
ENSG00000028203	VEZT	chr12:95645816-95656712	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,31	95645847,95650926,95651015,95656682	No	No	No	bcc_26243|Cycle_2|Type_1	31,31	95645847,95656682	psi1:0.642857142857,psi2:1.0	C1_9,C2_12	C1_5,C2_0	Yes
ENSG00000114956	DGUOK	chr2:74174003-74185300	+	ES	148	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,148,28	74174033,74177712,74177859,74185273	No	Yes	No	bcc_58675|Cycle_19|Type_1	30,28	74174033,74185273	psi1:0.953488372093,psi2:0.571428571429	C1_41,C2_24	C1_2,C2_18	Yes
ENSG00000141504	SAT2	chr17:7530702-7530917	-	altD	13	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,43	7530732,7530875	No	Yes	No	bcc_51863|Cycle_3|Type_1	30,30	7530732,7530888	psi1:0.785714285714,psi2:0.245614035088	C1_11,C2_14	C1_3,C2_43	(AC:7530888,CT:7530732);(GC:7530875,CT:7530732)
ENSG00000090060	PAPOLA	chr14:97022721-97029184	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,63,29	97022750,97026986,97027048,97029156	No	Yes	No	bcc_19807|Cycle_4|Type_1	29,29	97022750,97029156	psi1:0.75,psi2:1.0	C1_9,C2_38	C1_3,C2_0	Yes
ENSG00000101997	CCDC22	chrX:49105669-49105999	+	altD	24	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):49105970,49105723	54,30	49105723,49105970	No	No	No	bcc_69814|Cycle_0|Type_1	30,30	49105699,49105970	psi1:1.0,psi2:0.714285714286	C1_12,C2_5	C1_0,C2_2	Yes
ENSG00000048649	RSF1	chr11:77409707-77411801	-	altD	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,36	77409738,77411766	No	No	No	bcc_47173|Cycle_0|Type_1	31,27	77409738,77411775	psi1:1.0,psi2:0.714285714286	C1_12,C2_5	C1_0,C2_2	Yes
ENSG00000077809	GTF2I	chr7:74125410-74131240	+	ES	57	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):74125440,74129236,74131214	30,57,27	74125440,74129180,74129236,74131214	No	Yes	No	bcc_19353|Cycle_0|Type_1	30,27	74125440,74131214	psi1:0.575757575758,psi2:0.130434782609	C1_19,C2_3	C1_14,C2_20	Yes
ENSG00000172465	TCEAL1	chrX:102884458-102884842	+	altD	12	No	-	protein_coding	all_splice_sites_known_(3_ss)	43,30	102884501,102884813	No	No	No	bcc_62490|Cycle_0|Type_1	31,30	102884489,102884813	psi1:0.714285714286,psi2:0.25	C1_5,C2_1	C1_2,C2_3	Yes
ENSG00000138660	AP1AR	chr4:113181987-113186192	+	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,99,28	113182018,113184144,113184242,113186165	No	No	No	bcc_33330|Cycle_0|Type_1	31,28	113182018,113186165	psi1:0.3,psi2:0.764705882353	C1_9,C2_13	C1_21,C2_4	Yes
ENSG00000148814	LRRC27	chr10:134151169-134158032	+	ES	59	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,59,31	134151199,134155717,134155775,134158002	No	No	No	bcc_77930|Cycle_0|Type_1	30,31	134151199,134158002	psi1:0.5,psi2:0	C1_6,C2_0	C1_6,C2_4	Yes
ENSG00000137221	TJAP1	chr6:43465684-43466745	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,33	43465715,43466713	No	No	No	bcc_68673|Cycle_0|Type_1	31,30	43465715,43466716	psi1:0.333333333333,psi2:0.8	C1_3,C2_4	C1_6,C2_1	Yes
ENSG00000075711	DLG1	chr3:196863519-196865121	-	altD	7	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):196863549,196865093	30,36	196863549,196865086	No	No	No	bcc_42912|Cycle_0|Type_1	30,29	196863549,196865093	psi1:0.04,psi2:0.4	C1_2,C2_4	C1_48,C2_6	Yes
ENSG00000086102	NFX1	chr9:33347084-33347692	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):33347115,33347661	31,32	33347115,33347661	No	No	No	bcc_27308|Cycle_0|Type_1	31,29	33347115,33347664	psi1:1.0,psi2:0.6	C1_6,C2_6	C1_0,C2_4	Yes
ENSG00000169398	PTK2	chr8:141774359-141799602	-	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,18,30	141774389,141779674,141779691,141799573	No	No	No	bcc_14405|Cycle_0|Type_1	30,30	141774389,141799573	psi1:0.5,psi2:0	C1_6,C2_0	C1_6,C2_4	Yes
ENSG00000196776	CD47	chr3:107766109-107770814	-	ES_MULTI	58	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,33,25,29	107766139,107768466,107768498,107769425,107769449,107770786	No	Yes	No	bcc_1040|Cycle_0|Type_1	30,29	107766139,107770786	psi1:0.694444444444,psi2:0.245901639344	C1_50,C2_15	C1_22,C2_46	Yes
ENSG00000122203	KIAA1191	chr5:175786540-175788635	-	ES	108	No	-	protein_coding	all_splice_sites_known_(4_ss)	30,108,31	175786570,175786814,175786921,175788605	No	No	No	bcc_4743|Cycle_0|Type_1	30,31	175786570,175788605	psi1:0.695652173913,psi2:1.0	C1_16,C2_30	C1_7,C2_0	Yes
ENSG00000147419	CCDC25	chr8:27605765-27610058	-	ES	104	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,104,30	27605796,27606012,27606115,27610029	No	No	No	bcc_22668|Cycle_0|Type_1	31,30	27605796,27610029	psi1:0.711538461538,psi2:1.0	C1_37,C2_81	C1_15,C2_0	Yes
ENSG00000244187,ENSG00000272896	TMEM141,RP11-216L13.17	chr9:139685846-139686428	+	ES	67	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,67,30	139685876,139686163,139686229,139686399	No	No	No	bcc_67854|Cycle_0|Type_1	30,30	139685876,139686399	psi1:0.5,psi2:0.925925925926	C1_5,C2_50	C1_5,C2_4	Yes
ENSG00000165819	METTL3	chr14:21967485-21967664	+	IR	120	No	Yes	protein_coding	no_known_ss	179	-	No	No	No	bcc_775|Cycle_0|Type_1	30,29	21967515,21967636	psi1:0.857142857143,psi2:0.4375	C1_18,C2_7	C1_3,C2_9	(CT:21967515,AC:21967636)
ENSG00000138326	RPS24	chr10:79797031-79800401	+	ES	22	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,22,29	79797062,79799962,79799983,79800373	No	Yes	No	bcc_24161|Cycle_6|Type_1	31,29	79797062,79800373	psi1:0.98,psi2:0.634278002699	C1_784,C2_470	C1_16,C2_271	Yes
ENSG00000114956	DGUOK	chr2:74177829-74185303	+	ES	116	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,116,31	74177859,74184252,74184367,74185273	No	Yes	No	bcc_58675|Cycle_20|Type_1	30,31	74177859,74185273	psi1:0.694444444444,psi2:1.0	C1_25,C2_45	C1_11,C2_0	Yes
ENSG00000102103	PQBP1	chrX:48755336-48755804	+	altD	11	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	40,30	48755376,48755775	No	Yes	No	bcc_55570|Cycle_5|Type_1	29,30	48755365,48755775	psi1:0.692307692308,psi2:0.25	C1_9,C2_4	C1_4,C2_12	Yes
ENSG00000112531	QKI	chr6:163984720-163987780	+	altA	2054	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,2082	163984751,163985699	No	Yes	No	bcc_705|Cycle_4|Type_1	31,28	163984751,163987753	psi1:0.998696219035,psi2:0.758620689655	C1_2298,C2_44	C1_3,C2_14	Yes
ENSG00000166260	COX11	chr17:53040248-53040697	+	IR	390	No	Yes	protein_coding	no_known_ss	449	-	No	No	No	bcc_5424|Cycle_0|Type_1	28,31	53040276,53040667	psi1:0.391304347826,psi2:0.823529411765	C1_18,C2_70	C1_28,C2_15	(CT:53040276,AC:53040667)
ENSG00000113597	TRAPPC13	chr5:64948342-64954224	+	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,18,30	64948372,64951463,64951480,64954195	No	No	No	bcc_10901|Cycle_0|Type_1	30,30	64948372,64954195	psi1:0,psi2:0.333333333333	C1_0,C2_4	C1_11,C2_8	Yes
ENSG00000107263	RAPGEF1	chr9:134518773-134526227	-	ES	114	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,114,31	134518804,134525516,134525629,134526197	No	No	No	bcc_56868|Cycle_0|Type_1	31,31	134518804,134526197	psi1:0.636363636364,psi2:0.962962962963	C1_7,C2_26	C1_4,C2_1	Yes
ENSG00000163703	CRELD1	chr3:9985168-9986079	+	ES	194	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,194,31	9985199,9985586,9985779,9986049	No	No	No	bcc_23661|Cycle_0|Type_1	31,31	9985199,9986049	psi1:0.0909090909091,psi2:0.536585365854	C1_2,C2_22	C1_20,C2_19	Yes
ENSG00000182196	ARL6IP4	chr12:123465782-123466170	+	altA	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,53	123465813,123466118	No	Yes	No	bcc_899|Cycle_11|Type_1	31,29	123465813,123466142	psi1:0.0243902439024,psi2:0.333333333333	C1_2,C2_6	C1_80,C2_12	Yes
ENSG00000148572	NRBF2	chr10:64914489-64914552	+	deletion	3	No	-	protein_coding	no_known_ss	63	64914489	Yes	No	No	bcc_50795|Cycle_0|Type_1	29,31	64914518,64914522	psi1:1.0,psi2:0.474576271186	C1_16,C2_28	C1_0,C2_31	-
ENSG00000147655	RSPO2	chr8:108996700-108996763	+	deletion	3	No	-	protein_coding	no_known_ss	63	108996700	Yes	No	No	bcc_50795|Cycle_0|Type_1	29,31	108996729,108996733	psi1:1.0,psi2:0.474576271186	C1_16,C2_28	C1_0,C2_31	-
ENSG00000073417	PDE8A	chr15:85626845-85641206	+	ES	79	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,79,28	85626875,85632569,85632647,85641179	No	Yes	No	bcc_32243|Cycle_9|Type_1	30,28	85626875,85641179	psi1:0.714285714286,psi2:1.0	C1_5,C2_10	C1_2,C2_0	Yes
ENSG00000198589	LRBA	chr4:151186933-151203631	-	ES	152	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,152,30	151186964,151199005,151199156,151203602	No	No	No	bcc_52573|Cycle_0|Type_1	31,30	151186964,151203602	psi1:0.6875,psi2:1.0	C1_11,C2_17	C1_5,C2_0	Yes
ENSG00000090060	PAPOLA	chr14:97022719-97031320	+	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,75,29	97022750,97029156,97029230,97031292	No	Yes	No	bcc_19807|Cycle_0|Type_1	31,29	97022750,97031292	psi1:0.736842105263,psi2:1.0	C1_14,C2_36	C1_5,C2_0	Yes
ENSG00000047849	MAP4	chr3:47894397-47894683	-	altA	101	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	132,31	47894529,47894653	No	Yes	No	bcc_6457|Cycle_0|Type_1	31,31	47894428,47894653	psi1:0.508771929825,psi2:0.9375	C1_29,C2_30	C1_28,C2_2	Yes
ENSG00000079805	DNM2	chr19:10916613-10922969	+	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,12,30	10916643,10919245,10919256,10922940	No	No	No	bcc_47292|Cycle_1|Type_1	30,30	10916643,10922940	psi1:0.185185185185,psi2:0.617647058824	C1_5,C2_21	C1_22,C2_13	Yes
ENSG00000171603	CLSTN1	chr1:9796071-9801182	-	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,57,31	9796100,9797556,9797612,9801152	No	No	No	bcc_5948|Cycle_0|Type_1	29,31	9796100,9801152	psi1:0.925675675676,psi2:0.2	C1_137,C2_1	C1_11,C2_4	Yes
ENSG00000105223	PLD3	chr19:40871806-40872355	+	altA	35	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,65	40871837,40872291	No	Yes	No	bcc_13852|Cycle_5|Type_1	31,30	40871837,40872326	psi1:0.4,psi2:0	C1_6,C2_0	C1_9,C2_8	Yes
ENSG00000126214	KLC1	chr14:104145825-104167020	+	ES_MULTI	198	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,131,67,29	104145855,104153418,104153548,104158696,104158762,104166992	No	Yes	No	bcc_42941|Cycle_7|Type_1	30,29	104145855,104166992	psi1:0.642857142857,psi2:1.0	C1_9,C2_10	C1_5,C2_0	Yes
ENSG00000148341	SH3GLB2	chr9:131771594-131772080	-	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,15,31	131771625,131771732,131771746,131772050	No	No	No	bcc_20574|Cycle_0|Type_1	31,31	131771625,131772050	psi1:0.657534246575,psi2:0	C1_48,C2_0	C1_25,C2_10	Yes
ENSG00000141552	ANAPC11	chr17:79849679-79852372	+	altD	8	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	38,30	79849717,79852343	No	Yes	No	bcc_61328|Cycle_2|Type_1	30,30	79849709,79852343	psi1:1.0,psi2:0.5	C1_3,C2_5	C1_0,C2_5	Yes
ENSG00000165802	NSMF	chr9:140349729-140350893	-	ES	6	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,6,31	140349759,140350081,140350086,140350863	No	Yes	No	bcc_19204|Cycle_0|Type_1	30,31	140349759,140350863	psi1:0.75,psi2:0	C1_18,C2_0	C1_6,C2_2	Yes
ENSG00000143156	NME7	chr1:169279287-169336974	-	ES_MULTI	275	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,167,108,29	169279318,169292355,169292521,169293631,169293738,169336946	No	No	No	bcc_61739|Cycle_0|Type_1	31,29	169279318,169336946	psi1:1.0,psi2:0.714285714286	C1_28,C2_15	C1_0,C2_6	Yes
ENSG00000243749	ZMYM6NB	chr1:35447395-35447466	+	deletion	9	No	-	protein_coding	no_known_ss	71	35447395	No	No	No	bcc_59470|Cycle_2|Type_1	31,31	35447426,35447436	psi1:0.75,psi2:1.0	C1_9,C2_26	C1_3,C2_0	-
ENSG00000167522	ANKRD11	chr16:89383453-89484722	-	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	33,31	89383486,89484692	No	No	No	bcc_64726|Cycle_0|Type_1	30,31	89383483,89484692	psi1:0.888888888889,psi2:0.5	C1_8,C2_3	C1_1,C2_3	Yes
ENSG00000095321	CRAT	chr9:131870326-131872791	-	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,99,30	131870356,131871458,131871556,131872762	No	No	No	bcc_47311|Cycle_0|Type_1	30,30	131870356,131872762	psi1:0.333333333333,psi2:0.863636363636	C1_1,C2_19	C1_2,C2_3	Yes
ENSG00000128563	PRKRIP1	chr7:102036954-102040024	+	ES	79	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,79,30	102036984,102038067,102038145,102039995	No	Yes	No	bcc_816|Cycle_12|Type_1	30,30	102036984,102039995	psi1:0.666666666667,psi2:1.0	C1_4,C2_5	C1_2,C2_0	Yes
ENSG00000147853	AK3	chr9:4713915-4714078	+	altAD	13	Yes	-	protein_coding	no_known_ss	34,39	4713949,4714040	No	Yes	No	bcc_75224|Cycle_408|Type_1	29,31	4713944,4714048	psi1:1.0,psi2:0.666666666667	C1_5,C2_4	C1_0,C2_2	(GC:4713949,AT:4714040);(TA:4713944,AT:4714048)
ENSG00000103502	CDIPT	chr16:29872550-29874166	-	ES	50	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,50,31	29872580,29873907,29873956,29874136	No	Yes	No	bcc_58140|Cycle_0|Type_1	30,31	29872580,29874136	psi1:1.0,psi2:0.666666666667	C1_15,C2_12	C1_0,C2_6	Yes
ENSG00000106078	COBL	chr7:51098541-51098601	-	deletion	3	No	Yes	protein_coding	no_known_ss	60	51098541	No	No	No	bcc_1823|Cycle_4|Type_1	26,31	51098567,51098571	psi1:0.6875,psi2:1.0	C1_11,C2_16	C1_5,C2_0	-
ENSG00000149182	ARFGAP2	chr11:47193854-47195006	-	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,42,30	47193884,47194261,47194302,47194977	No	No	No	bcc_49833|Cycle_0|Type_1	30,30	47193884,47194977	psi1:0.0769230769231,psi2:0.466666666667	C1_1,C2_7	C1_12,C2_8	Yes
ENSG00000203705	TATDN3	chr1:212981159-212985621	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	212981190,212985590	No	Yes	No	bcc_32312|Cycle_8|Type_1	31,29	212981190,212985593	psi1:0.260869565217,psi2:1.0	C1_6,C2_2	C1_17,C2_0	Yes
ENSG00000077235	GTF3C1	chr16:27500468-27500977	-	altD	24	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):27500923,27500499	31,55	27500499,27500923	No	No	No	bcc_45101|Cycle_0|Type_1	31,31	27500499,27500947	psi1:0.571428571429,psi2:1.0	C1_4,C2_3	C1_3,C2_0	Yes
ENSG00000130396	MLLT4	chr6:168291678-168297586	+	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,29	168291709,168294542,168294586,168297558	No	No	No	bcc_44909|Cycle_0|Type_1	31,29	168291709,168297558	psi1:0.642857142857,psi2:0	C1_9,C2_0	C1_5,C2_2	Yes
ENSG00000149187	CELF1	chr11:47498480-47498879	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	47498511,47498849	No	No	No	bcc_22929|Cycle_0|Type_1	28,31	47498508,47498849	psi1:0.75,psi2:0.294117647059	C1_6,C2_5	C1_2,C2_12	Yes
ENSG00000141380	SS18	chr18:23615061-23618548	-	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,93,30	23615091,23615795,23615887,23618519	No	No	No	bcc_14831|Cycle_0|Type_1	30,30	23615091,23618519	psi1:0.92,psi2:0.541666666667	C1_23,C2_13	C1_2,C2_11	Yes
ENSG00000138326	RPS24	chr10:79797031-79800401	+	ES_MULTI	25	Yes	Yes	protein_coding	4_ss_annotated_(over_6_ss):79797062,79799983,79800373,79797723	31,7,18,29	79797062,79797723,79797729,79799966,79799983,79800373	No	Yes	No	bcc_24161|Cycle_7|Type_1	31,29	79797062,79800373	psi1:0.952662721893,psi2:0.541455160745	C1_322,C2_320	C1_16,C2_271	Yes
ENSG00000070501	POLB	chr8:42196174-42202497	+	ES	58	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,58,27	42196203,42196530,42196587,42202471	No	No	No	bcc_44475|Cycle_0|Type_1	29,27	42196203,42202471	psi1:0.952380952381,psi2:0.576923076923	C1_20,C2_15	C1_1,C2_11	Yes
ENSG00000104231	ZFAND1	chr8:82627319-82630447	-	ES	40	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,40,31	82627349,82629484,82629523,82630417	No	No	No	bcc_41030|Cycle_0|Type_1	30,31	82627349,82630417	psi1:0.7,psi2:0.272727272727	C1_7,C2_3	C1_3,C2_8	Yes
ENSG00000162959,ENSG00000162961	MEMO1,DPY30	chr2:32094991-32143025	-	ES_MULTI	220	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(6_ss)	30,77,143,31	32095021,32108455,32108531,32117061,32117203,32142995	No	Yes	No	bcc_49522|Cycle_2|Type_1	30,31	32095021,32142995	psi1:0.772727272727,psi2:1.0	C1_17,C2_69	C1_5,C2_0	Yes
ENSG00000087157	PGS1	chr17:76415726-76420168	+	altD	50	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	80,27	76415806,76420142	No	No	No	bcc_76047|Cycle_0|Type_1	30,27	76415756,76420142	psi1:0.727272727273,psi2:0	C1_8,C2_0	C1_3,C2_1	Yes
ENSG00000129187	DCTD	chr4:183836698-183838494	-	altD	23	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,54	183836728,183838441	No	No	No	bcc_59483|Cycle_0|Type_1	30,31	183836728,183838464	psi1:0,psi2:0.727272727273	C1_0,C2_8	C1_1,C2_3	Yes
ENSG00000141503	MINK1	chr17:4796862-4797315	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):4797283,4796892	30,33	4796892,4797283	No	No	No	bcc_58981|Cycle_0|Type_1	30,30	4796892,4797286	psi1:0.666666666667,psi2:0	C1_16,C2_0	C1_8,C2_3	Yes
ENSG00000137500	CCDC90B	chr11:82985753-82996946	-	ES	120	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,120,31	82985783,82991184,82991303,82996916	No	Yes	No	bcc_50331|Cycle_2|Type_1	30,31	82985783,82996916	psi1:0.75,psi2:1.0	C1_6,C2_16	C1_2,C2_0	Yes
ENSG00000143702	CEP170	chr1:243303380-243305648	-	altD	30	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,61	243303409,243305588	Yes	Yes	No	bcc_34845|Cycle_1|Type_1	29,31	243303409,243305618	psi1:0.727272727273,psi2:0	C1_16,C2_0	C1_6,C2_2	Yes
ENSG00000154608	CEP170P1	chr4:119459132-119461402	+	altD	30	No	-	pseudogene	all_splice_sites_known_(3_ss)	61,29	119459193,119461374	Yes	Yes	No	bcc_34845|Cycle_1|Type_1	31,29	119459163,119461374	psi1:0.727272727273,psi2:0	C1_16,C2_0	C1_6,C2_2	Yes
ENSG00000198408	MGEA5	chr10:103550814-103551139	-	IR	265	Yes	Yes	protein_coding	no_known_ss	325	-	No	No	No	bcc_44238|Cycle_0|Type_1	31,29	103550845,103551111	psi1:0.653846153846,psi2:0.111111111111	C1_51,C2_2	C1_27,C2_16	Yes
ENSG00000131620	ANO1	chr11:69954480-69957842	+	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,66,30	69954510,69957232,69957297,69957813	No	No	No	bcc_37738|Cycle_0|Type_1	30,30	69954510,69957813	psi1:0,psi2:0.90243902439	C1_0,C2_37	C1_1,C2_4	Yes
ENSG00000085733	CTTN	chr11:70266586-70269073	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,111,28	70266616,70267576,70267686,70269046	No	No	No	bcc_54001|Cycle_0|Type_1	30,28	70266616,70269046	psi1:0.384615384615,psi2:0.88	C1_30,C2_22	C1_48,C2_3	(GT:70266616,AG:70269046);(GT:70266616,AG:70267576);(GC:70267686,AG:70269046)
ENSG00000133026	MYH10	chr17:8424572-8438735	-	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,31	8424603,8433941,8434003,8438705	No	Yes	Yes	bcc_56847|Cycle_4|Type_1	31,31	8424603,8438705	psi1:0.538461538462,psi2:0	C1_7,C2_0	C1_6,C2_3	Yes
ENSG00000064225	ST3GAL6	chr3:98489769-98491685	+	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,70,29	98489800,98489965,98490034,98491657	No	No	No	bcc_22419|Cycle_0|Type_1	31,29	98489800,98491657	psi1:0.65,psi2:0.222222222222	C1_13,C2_8	C1_7,C2_28	Yes
ENSG00000163754	GYG1	chr3:148742028-148744576	+	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,51,30	148742059,148744239,148744289,148744547	No	No	No	bcc_49047|Cycle_0|Type_1	31,30	148742059,148744547	psi1:0.394736842105,psi2:0	C1_15,C2_0	C1_23,C2_19	Yes
ENSG00000177728	KIAA0195	chr17:73487902-73488585	+	altD	48	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	79,31	73487981,73488555	No	No	No	bcc_44706|Cycle_0|Type_1	31,31	73487933,73488555	psi1:0.85,psi2:0.428571428571	C1_17,C2_3	C1_3,C2_4	Yes
ENSG00000238221	RP11-69L16.4	chr6:7281425-7281487	-	deletion	3	No	-	antisense	no_known_ss	62	7281425	No	No	No	bcc_14883|Cycle_1|Type_1	28,31	7281453,7281457	psi1:1.0,psi2:0.477777777778	C1_22,C2_43	C1_0,C2_47	-
ENSG00000173715	C11orf80	chr11:66589206-66595767	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,111,31	66589235,66590035,66590145,66595737	No	No	No	bcc_67130|Cycle_0|Type_1	29,31	66589235,66595737	psi1:0.666666666667,psi2:1.0	C1_8,C2_9	C1_4,C2_0	Yes
ENSG00000171497	PPID	chr4:159630947-159631810	-	altAD	802	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):159630976,159631780	276,586	159631223,159631225	No	Yes	No	bcc_7876|Cycle_2|Type_1	29,31	159630976,159631780	psi1:0.371428571429,psi2:0.887820512821	C1_13,C2_277	C1_22,C2_35	-;(AC:159631780,CT:159630976)
ENSG00000100359	SGSM3	chr22:40796786-40798170	+	ES	83	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,83,28	40796817,40797597,40797679,40798143	No	No	No	bcc_73128|Cycle_0|Type_1	31,28	40796817,40798143	psi1:1.0,psi2:0.692307692308	C1_12,C2_9	C1_0,C2_4	Yes
ENSG00000100644	HIF1A	chr14:62162526-62187130	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	62162557,62187097	No	No	No	bcc_35334|Cycle_0|Type_1	31,31	62162557,62187100	psi1:0.384615384615,psi2:1.0	C1_5,C2_2	C1_8,C2_0	Yes
ENSG00000177410	ZFAS1	chr20:47897076-47905611	+	ES	62	Yes	-	antisense	all_splice_sites_known_(4_ss)	31,62,30	47897107,47897440,47897501,47905582	No	Yes	No	bcc_56508|Cycle_2|Type_1	31,30	47897107,47905582	psi1:0.847133757962,psi2:0.357142857143	C1_133,C2_10	C1_24,C2_18	Yes
ENSG00000112305	SMAP1	chr6:71571423-71571561	-	IR	80	Yes	Yes	protein_coding	no_known_ss	138	-	No	No	No	bcc_2679|Cycle_1|Type_1	29,29	71571452,71571533	psi1:0.5,psi2:1.0	C1_24,C2_13	C1_24,C2_0	Yes
ENSG00000163812	ZDHHC3	chr3:44970897-44974640	-	ES_MULTI	83	Yes	Yes	protein_coding	4_ss_annotated_(over_6_ss):44974610,44970928,44974482,44974399	31,22,61,31	44970928,44974399,44974420,44974422,44974482,44974610	No	Yes	No	bcc_37222|Cycle_5|Type_1	31,31	44970928,44974610	psi1:0,psi2:0.388888888889	C1_0,C2_7	C1_9,C2_11	(AC:44974399,CT:44970928);(AC:44974610,CT:44974482);(AC:44974610,CT:44970928);-
ENSG00000159596	TMEM69	chr1:46153916-46156706	+	altA	32	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):46153947,46156646	31,61	46153947,46156646	No	No	No	bcc_24816|Cycle_0|Type_1	31,29	46153947,46156678	psi1:1.0,psi2:0.6875	C1_14,C2_11	C1_0,C2_5	Yes
ENSG00000108433,ENSG00000262633	GOSR2,RP11-156P1.2	chr17:45009535-45015995	+	ES	141	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,141,31	45009565,45012395,45012535,45015965	No	No	No	bcc_28557|Cycle_0|Type_1	30,31	45009565,45015965	psi1:0.708333333333,psi2:0.982142857143	C1_17,C2_55	C1_7,C2_1	Yes
ENSG00000077809	GTF2I	chr7:74125409-74131240	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,60,27	74125440,74129177,74129236,74131214	No	Yes	No	bcc_19353|Cycle_4|Type_1	31,27	74125440,74131214	psi1:0.545454545455,psi2:0.142857142857	C1_18,C2_4	C1_15,C2_24	Yes
ENSG00000170581	STAT2	chr12:56743014-56743240	-	IR	164	Yes	Yes	protein_coding	no_known_ss	226	-	No	No	No	bcc_14482|Cycle_0|Type_1	31,31	56743045,56743210	psi1:0.814814814815,psi2:0.333333333333	C1_22,C2_2	C1_5,C2_4	Yes
ENSG00000088367	EPB41L1	chr20:34785932-34800220	+	ES	411	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,411,27	34785963,34797410,34797820,34800194	No	No	No	bcc_38525|Cycle_0|Type_1	31,27	34785963,34800194	psi1:0.962962962963,psi2:0.5	C1_78,C2_2	C1_3,C2_2	Yes
ENSG00000089022	MAPKAPK5	chr12:112326774-112327873	+	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	36,30	112326810,112327844	No	No	No	bcc_50715|Cycle_0|Type_1	30,30	112326804,112327844	psi1:0.12,psi2:0.5	C1_3,C2_10	C1_22,C2_10	Yes
ENSG00000164105	SAP30	chr4:174294635-174298383	+	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,99,28	174294666,174295090,174295188,174298356	No	No	No	bcc_58060|Cycle_0|Type_1	31,28	174294666,174298356	psi1:1.0,psi2:0.789473684211	C1_70,C2_15	C1_0,C2_4	Yes
ENSG00000033627	ATP6V0A1	chr17:40659614-40665908	+	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,18,30	40659645,40660590,40660607,40665879	No	No	No	bcc_26457|Cycle_0|Type_1	31,30	40659645,40665879	psi1:0.707547169811,psi2:0	C1_75,C2_0	C1_31,C2_10	Yes
ENSG00000243147	MRPL33	chr2:27994654-28002330	+	ES	107	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	12,19,107,31	27994666,27995541,27995559,27997291,27997397,28002300	No	No	No	bcc_40478|Cycle_0|Type_1	12,19,31	27994666,27995541,27995559,28002300	psi1:0.353741496599,psi2:0.77358490566	C1_52,C2_82	C1_95,C2_24	Yes
ENSG00000129103	SUMF2	chr7:56140773-56144556	+	ES	151	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,151,30	56140804,56142279,56142429,56144527	No	Yes	No	bcc_15514|Cycle_1|Type_1	31,30	56140804,56144527	psi1:0.777777777778,psi2:1.0	C1_14,C2_48	C1_4,C2_0	Yes
ENSG00000159921	GNE	chr9:36234100-36246057	-	ES	153	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,153,30	36234129,36236829,36236981,36246028	No	No	No	bcc_21178|Cycle_0|Type_1	29,30	36234129,36246028	psi1:0.789473684211,psi2:1.0	C1_15,C2_67	C1_4,C2_0	Yes
ENSG00000183077	AFMID	chr17:76198801-76202055	+	ES_MULTI	472	Yes	Yes	protein_coding	all_splice_sites_known_(12_ss)	31,86,73,98,79,136,29	76198832,76200737,76200822,76200909,76200981,76201174,76201271,76201521,76201599,76201684,76201819,76202027	No	Yes	No	bcc_3143|Cycle_75|Type_1	31,29	76198832,76202027	psi1:0.272727272727,psi2:0.875862068966	C1_3,C2_127	C1_8,C2_18	Yes
ENSG00000183077	AFMID	chr17:76198801-76200936	+	ES	86	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,86,28	76198832,76200737,76200822,76200909	No	Yes	No	bcc_3143|Cycle_117|Type_1	31,28	76198832,76200909	psi1:0,psi2:0.857142857143	C1_0,C2_48	C1_2,C2_8	Yes
ENSG00000112936	C7	chr5:40981742-40981802	+	deletion	3	No	-	protein_coding	no_known_ss	60	40981742	No	No	No	bcc_25639|Cycle_0|Type_1	26,31	40981768,40981772	psi1:1.0,psi2:0.4	C1_8,C2_20	C1_0,C2_30	-
ENSG00000126088	UROD	chr1:45477926-45478608	+	altA	50	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,80	45477957,45478529	No	No	No	bcc_66838|Cycle_0|Type_1	31,30	45477957,45478579	psi1:0.166666666667,psi2:0.5625	C1_4,C2_9	C1_20,C2_7	Yes
ENSG00000165630	PRPF18	chr10:13639504-13642272	+	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,29	13639535,13639645,13639671,13642244	No	No	No	bcc_45726|Cycle_0|Type_1	31,29	13639535,13642244	psi1:0.25,psi2:0	C1_2,C2_0	C1_6,C2_13	Yes
ENSG00000160710	ADAR	chr1:154562373-154562768	-	altD	78	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,109	154562404,154562660	No	No	No	bcc_31151|Cycle_0|Type_1	31,31	154562404,154562738	psi1:1.0,psi2:0.76	C1_46,C2_19	C1_0,C2_6	Yes
ENSG00000161547	SRSF2	chr17:74731210-74732266	-	ES	104	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,104,31	74731240,74731854,74731957,74732236	No	No	No	bcc_29422|Cycle_2|Type_1	30,31	74731240,74732236	psi1:0.453125,psi2:0.078431372549	C1_29,C2_4	C1_35,C2_47	Yes
ENSG00000105518	TMEM205	chr19:11456274-11456833	-	altA	109	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	139,31	11456413,11456803	No	Yes	No	bcc_63141|Cycle_8|Type_1	30,31	11456304,11456803	psi1:0.683333333333,psi2:0.272727272727	C1_41,C2_18	C1_19,C2_48	Yes
ENSG00000148187	MRRF	chr9:125047535-125054056	+	ES	128	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,128,29	125047566,125048318,125048445,125054028	No	No	No	bcc_63789|Cycle_0|Type_1	31,29	125047566,125054028	psi1:1.0,psi2:0.4375	C1_3,C2_7	C1_0,C2_9	Yes
ENSG00000005339	CREBBP	chr16:3824663-3828042	-	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,31	3824694,3827614,3827658,3828012	No	No	No	bcc_57808|Cycle_0|Type_1	31,31	3824694,3828012	psi1:0.875,psi2:0.5	C1_7,C2_3	C1_1,C2_3	Yes
ENSG00000093000	NUP50	chr22:45580563-45580628	-	deletion	6	No	-	protein_coding	no_known_ss	65	45580563	No	No	No	bcc_30860|Cycle_0|Type_1	28,31	45580591,45580598	psi1:0.75,psi2:0.3	C1_3,C2_3	C1_1,C2_7	-
ENSG00000134644	PUM1	chr1:31479917-31501672	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):31501643,31479949	32,30	31479949,31501643	No	No	No	bcc_23305|Cycle_0|Type_1	29,30	31479946,31501643	psi1:0.833333333333,psi2:0.333333333333	C1_15,C2_1	C1_3,C2_2	Yes
ENSG00000142949	PTPRF	chr1:44075140-44079319	+	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,33,31	44075169,44078439,44078471,44079289	No	No	No	bcc_17999|Cycle_0|Type_1	29,31	44075169,44079289	psi1:0.5,psi2:0.125	C1_19,C2_6	C1_19,C2_42	Yes
ENSG00000175931	UBE2O	chr17:74385899-74385959	+	deletion	3	No	-	protein_coding	no_known_ss	60	74385899	No	No	No	bcc_32290|Cycle_0|Type_1	26,31	74385925,74385929	psi1:0.53488372093,psi2:1.0	C1_23,C2_13	C1_20,C2_0	-
ENSG00000153066	TXNDC11	chr16:11815498-11827868	-	ES	130	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,130,31	11815526,11824501,11824630,11827838	No	No	No	bcc_32760|Cycle_0|Type_1	28,31	11815526,11827838	psi1:0.666666666667,psi2:0.978260869565	C1_6,C2_90	C1_3,C2_2	Yes
ENSG00000120686	UFM1	chr13:38933440-38934877	+	altA	670	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):38934848,38933470	30,700	38933470,38934178	No	No	No	bcc_13227|Cycle_0|Type_1	30,30	38933470,38934848	psi1:0.762376237624,psi2:0.35	C1_77,C2_21	C1_24,C2_39	Yes
ENSG00000173264	GPR137	chr11:64056162-64056641	+	altA	106	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,133	64056193,64056509	No	No	No	bcc_76283|Cycle_0|Type_1	31,27	64056193,64056615	psi1:0.928571428571,psi2:0.571428571429	C1_26,C2_4	C1_2,C2_3	Yes
ENSG00000174989	FBXW8	chr12:117383303-117402531	+	ES	89	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,89,30	117383333,117387423,117387511,117402502	No	No	No	bcc_74398|Cycle_0|Type_1	30,30	117383333,117402502	psi1:0.666666666667,psi2:1.0	C1_4,C2_4	C1_2,C2_0	Yes
ENSG00000108840	HDAC5	chr17:42169622-42169794	-	altD	15	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):42169652,42169749	30,46	42169652,42169749	No	No	No	bcc_55977|Cycle_0|Type_1	30,31	42169652,42169764	psi1:1.0,psi2:0.666666666667	C1_4,C2_4	C1_0,C2_2	Yes
ENSG00000119979	FAM45A	chr10:120863678-120867509	+	altA	20	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,50	120863709,120867460	No	No	No	bcc_14468|Cycle_0|Type_1	31,30	120863709,120867480	psi1:0.444444444444,psi2:0	C1_4,C2_0	C1_5,C2_3	Yes
ENSG00000198363	ASPH	chr8:62593566-62596628	-	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,45,31	62593595,62594998,62595042,62596598	No	No	No	bcc_2858|Cycle_0|Type_1	29,31	62593595,62596598	psi1:0.753731343284,psi2:0.166666666667	C1_101,C2_3	C1_33,C2_15	Yes
ENSG00000138303	ASCC1	chr10:73857178-73892845	-	ES	86	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,86,31	73857208,73887840,73887925,73892815	No	No	No	bcc_12279|Cycle_0|Type_1	30,31	73857208,73892815	psi1:0.979166666667,psi2:0.714285714286	C1_47,C2_10	C1_1,C2_4	Yes
ENSG00000108559	NUP88	chr17:5302940-5308407	-	ES	148	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,148,31	5302970,5307419,5307566,5308377	No	No	No	bcc_41382|Cycle_0|Type_1	30,31	5302970,5308377	psi1:0.8,psi2:1.0	C1_12,C2_57	C1_3,C2_0	Yes
ENSG00000105341	ATP5SL	chr19:41938282-41939472	-	ES	163	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,163,31	41938313,41939177,41939339,41939442	No	No	No	bcc_26823|Cycle_0|Type_1	31,31	41938313,41939442	psi1:0.555555555556,psi2:0.909090909091	C1_5,C2_10	C1_4,C2_1	Yes
ENSG00000103356	EARS2	chr16:23534708-23534862	+	IR	93	No	-	protein_coding	no_known_ss	154	-	No	No	No	bcc_33974|Cycle_0|Type_1	30,31	23534738,23534832	psi1:0.666666666667,psi2:0.962962962963	C1_10,C2_52	C1_5,C2_2	(CT:23534738,AC:23534832)
ENSG00000082515	MRPL22	chr5:154320794-154335961	+	ES	118	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,118,31	154320825,154330381,154330498,154335931	No	No	No	bcc_50607|Cycle_0|Type_1	31,31	154320825,154335931	psi1:0.771084337349,psi2:1.0	C1_64,C2_161	C1_19,C2_0	Yes
ENSG00000028310	BRD9	chr5:886791-887506	-	altA	60	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	91,31	886882,887476	No	No	No	bcc_58838|Cycle_0|Type_1	31,31	886822,887476	psi1:0.6,psi2:0	C1_12,C2_0	C1_8,C2_3	Yes
ENSG00000151148	UBE3B	chr12:109974264-109974329	-	deletion	3	No	-	protein_coding	no_known_ss	65	109974264	No	No	No	bcc_50619|Cycle_0|Type_1	31,31	109974295,109974299	psi1:0,psi2:0.2	C1_0,C2_2	C1_36,C2_8	-
ENSG00000149577	SIDT2	chr11:117057321-117058123	+	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,12,30	117057352,117057706,117057717,117058094	No	No	No	bcc_31130|Cycle_0|Type_1	31,30	117057352,117058094	psi1:0.636363636364,psi2:0.2	C1_7,C2_1	C1_4,C2_4	Yes
ENSG00000124214	STAU1	chr20:47770579-47790762	-	ES	289	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	29,289,31	47770608,47782534,47782822,47790732	No	No	No	bcc_18488|Cycle_0|Type_1	29,31	47770608,47790732	psi1:0.742424242424,psi2:0.333333333333	C1_49,C2_14	C1_17,C2_28	Yes
ENSG00000196504	PRPF40A	chr2:153520451-153520682	-	altA	12	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):153520481,153520652	42,31	153520493,153520652	No	No	No	bcc_15930|Cycle_0|Type_1	30,31	153520481,153520652	psi1:0.533333333333,psi2:0.151515151515	C1_16,C2_5	C1_14,C2_28	Yes
ENSG00000127603	MACF1	chr1:39924890-39926334	+	ES	12	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):39925504,39924921,39926304	31,12,31	39924921,39925493,39925504,39926304	No	No	No	bcc_16568|Cycle_0|Type_1	31,31	39924921,39926304	psi1:0.363636363636,psi2:0	C1_12,C2_0	C1_21,C2_17	Yes
ENSG00000204256	BRD2	chr6:32942511-32943190	+	ES	92	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,92,30	32942542,32942798,32942889,32943161	No	No	No	bcc_23356|Cycle_0|Type_1	31,30	32942542,32943161	psi1:0.0606060606061,psi2:0.414634146341	C1_2,C2_17	C1_31,C2_24	Yes
ENSG00000198363	ASPH	chr8:62555964-62557189	-	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,57,31	62555992,62556504,62556560,62557159	No	No	No	bcc_2861|Cycle_0|Type_1	28,31	62555992,62557159	psi1:0.995024875622,psi2:0.78	C1_200,C2_39	C1_1,C2_11	Yes
ENSG00000011566	MAP4K3	chr2:39560686-39564694	-	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,48,28	39560715,39564061,39564108,39564667	No	No	No	bcc_47766|Cycle_0|Type_1	29,28	39560715,39564667	psi1:1.0,psi2:0.733333333333	C1_17,C2_11	C1_0,C2_4	Yes
ENSG00000068323	TFE3	chrX:48896841-48898012	-	altA	65	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	94,31	48896935,48897982	No	Yes	No	bcc_78253|Cycle_2|Type_1	29,31	48896870,48897982	psi1:0.647058823529,psi2:0	C1_11,C2_0	C1_6,C2_2	Yes
ENSG00000147419	CCDC25	chr8:27610074-27619965	-	ES	52	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,52,30	27610104,27614236,27614287,27619936	No	No	No	bcc_22669|Cycle_0|Type_1	30,30	27610104,27619936	psi1:0.702702702703,psi2:1.0	C1_26,C2_31	C1_11,C2_0	Yes
ENSG00000157045	NTAN1	chr16:15138235-15141328	-	altD	24	No	-	protein_coding	all_splice_sites_known_(3_ss)	29,54	15138264,15141275	No	No	No	bcc_38721|Cycle_0|Type_1	29,30	15138264,15141299	psi1:0.285714285714,psi2:0	C1_4,C2_0	C1_10,C2_13	Yes
ENSG00000100266	PACSIN2	chr22:43272308-43275084	-	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,123,31	43272339,43272894,43273016,43275054	No	No	No	bcc_15370|Cycle_2|Type_1	31,31	43272339,43275054	psi1:0.727272727273,psi2:1.0	C1_16,C2_23	C1_6,C2_0	Yes
ENSG00000070081	NUCB2	chr11:17304459-17316901	+	ES	80	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,80,31	17304490,17308181,17308260,17316871	No	No	No	bcc_21579|Cycle_0|Type_1	31,31	17304490,17316871	psi1:0.416666666667,psi2:0.0471698113208	C1_5,C2_5	C1_7,C2_101	Yes
ENSG00000145362	ANK2	chr4:114267147-114281985	+	ES	33	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,33,22,7	114267178,114269432,114269464,114271384,114271405,114281979	No	No	No	bcc_29777|Cycle_0|Type_1	31,22,7	114267178,114271384,114271405,114281979	psi1:0.96062992126,psi2:0	C1_122,C2_0	C1_5,C2_1	Yes
ENSG00000110844	PRPF40B	chr12:50036427-50036741	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	50036458,50036710	No	No	No	bcc_73535|Cycle_0|Type_1	31,29	50036458,50036713	psi1:0.6,psi2:1.0	C1_3,C2_2	C1_2,C2_0	Yes
ENSG00000119906	FAM178A	chr10:102678167-102683762	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):102683732,102678198	31,31	102678198,102683732	No	No	No	bcc_68796|Cycle_0|Type_1	31,28	102678198,102683735	psi1:0.6,psi2:1.0	C1_3,C2_2	C1_2,C2_0	Yes
ENSG00000126883	NUP214	chr9:134021660-134022904	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	134021691,134022874	No	No	No	bcc_66485|Cycle_0|Type_1	31,28	134021691,134022877	psi1:0.4,psi2:0	C1_4,C2_0	C1_6,C2_4	Yes
ENSG00000127616	SMARCA4	chr19:11152208-11168961	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,31	11152236,11168931	No	No	No	bcc_4655|Cycle_0|Type_1	28,28	11152236,11168934	psi1:0.6,psi2:1.0	C1_9,C2_6	C1_6,C2_0	Yes
ENSG00000124120	TTPAL	chr20:43123160-43123221	-	deletion	3	No	-	protein_coding	no_known_ss	61	43123160	No	No	No	bcc_20028|Cycle_0|Type_1	27,31	43123187,43123191	psi1:1.0,psi2:0.466666666667	C1_3,C2_7	C1_0,C2_8	-
ENSG00000151914	DST	chr6:56325023-56328393	-	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,111,31	56325052,56327844,56327954,56328363	No	No	No	bcc_15294|Cycle_1|Type_1	29,31	56325052,56328363	psi1:0.690476190476,psi2:0.979591836735	C1_29,C2_48	C1_13,C2_1	Yes
ENSG00000138381	ASNSD1	chr2:190528650-190530177	+	altA	46	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,76	190528680,190530102	No	No	No	bcc_48356|Cycle_0|Type_1	30,30	190528680,190530148	psi1:0.676470588235,psi2:1.0	C1_23,C2_22	C1_11,C2_0	Yes
ENSG00000138443	ABI2	chr2:204245076-204255796	+	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,18,28	204245107,204246912,204246929,204255769	No	No	No	bcc_7218|Cycle_0|Type_1	31,28	204245107,204255769	psi1:0.578947368421,psi2:0	C1_11,C2_0	C1_8,C2_3	Yes
ENSG00000136682	CBWD2	chr2:114222719-114239781	+	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,57,28	114222750,114228610,114228666,114239754	Yes	No	No	bcc_11224|Cycle_5|Type_1	31,28	114222750,114239754	psi1:1.0,psi2:0.698630136986	C1_56,C2_51	C1_0,C2_22	Yes
ENSG00000172785	CBWD1	chr9:135002-152064	-	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,57,31	135030,146102,146158,152034	Yes	No	No	bcc_11224|Cycle_5|Type_1	28,31	135030,152034	psi1:1.0,psi2:0.698630136986	C1_56,C2_51	C1_0,C2_22	Yes
ENSG00000147996	CBWD5	chr9:70445976-70463061	-	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,57,31	70446004,70457087,70457143,70463031	Yes	No	No	bcc_11224|Cycle_5|Type_1	28,31	70446004,70463031	psi1:1.0,psi2:0.698630136986	C1_56,C2_51	C1_0,C2_22	Yes
ENSG00000215126	CBWD7	chr9:42683903-42700988	+	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,57,28	42683934,42689822,42689878,42700961	Yes	No	No	bcc_11224|Cycle_5|Type_1	31,28	42683934,42700961	psi1:1.0,psi2:0.698630136986	C1_56,C2_51	C1_0,C2_22	Yes
ENSG00000171497	PPID	chr4:159630947-159631810	-	IR	803	Yes	Yes	protein_coding	no_known_ss	863	-	No	Yes	No	bcc_7876|Cycle_6|Type_1	29,31	159630976,159631780	psi1:0.421052631579,psi2:0.892966360856	C1_16,C2_292	C1_22,C2_35	Yes
ENSG00000198363	ASPH	chr8:62550890-62555477	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	62550922,62555447	No	No	No	bcc_2862|Cycle_0|Type_1	29,31	62550919,62555447	psi1:0.897435897436,psi2:0.51724137931	C1_105,C2_15	C1_12,C2_14	Yes
ENSG00000108848	LUC7L3	chr17:48827971-48828136	+	altA	23	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,52	48828002,48828085	No	Yes	No	bcc_31020|Cycle_2|Type_1	31,29	48828002,48828108	psi1:0.135135135135,psi2:0.571428571429	C1_5,C2_4	C1_32,C2_3	Yes
ENSG00000086758	HUWE1	chrX:53578122-53578303	-	altD	48	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):53578227,53578150	28,77	53578150,53578227	No	No	No	bcc_23573|Cycle_0|Type_1	28,29	53578150,53578275	psi1:1.0,psi2:0.769230769231	C1_21,C2_10	C1_0,C2_3	Yes
ENSG00000130772	MED18	chr1:28655661-28660957	+	ES	139	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,139,30	28655691,28657108,28657246,28660928	No	No	No	bcc_55604|Cycle_0|Type_1	30,30	28655691,28660928	psi1:0.75,psi2:1.0	C1_9,C2_15	C1_3,C2_0	Yes
ENSG00000155256	ZFYVE27	chr10:99511191-99512824	+	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,21,30	99511219,99512614,99512634,99512795	No	No	No	bcc_51620|Cycle_0|Type_1	28,30	99511219,99512795	psi1:0.625,psi2:0	C1_5,C2_0	C1_3,C2_1	Yes
ENSG00000203666	EFCAB2	chr1:245133717-245222716	+	ES	85	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,85,29	245133745,245180544,245180628,245222688	No	No	No	bcc_43757|Cycle_0|Type_1	28,29	245133745,245222688	psi1:0.625,psi2:0	C1_5,C2_0	C1_3,C2_1	Yes
ENSG00000169398	PTK2	chr8:141678493-141684426	-	ES	9	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,9,30	141678523,141679826,141679834,141684397	No	No	No	bcc_14396|Cycle_0|Type_1	30,30	141678523,141684397	psi1:0.683333333333,psi2:0.111111111111	C1_41,C2_1	C1_19,C2_8	Yes
ENSG00000168564	CDKN2AIP	chr4:184367528-184367592	-	deletion	3	No	Yes	protein_coding	no_known_ss	64	184367528	No	No	No	bcc_41616|Cycle_0|Type_1	30,31	184367558,184367562	psi1:1.0,psi2:0.714285714286	C1_6,C2_5	C1_0,C2_2	-
ENSG00000130779	CLIP1	chr12:122819222-122825558	-	ES_altD	345	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	30,117,259	122819252,122821179,122821295,122825300	No	No	No	bcc_38690|Cycle_0|Type_1	30,31	122819252,122825528	psi1:0.714285714286,psi2:1.0	C1_30,C2_36	C1_12,C2_0	Yes
ENSG00000090060	PAPOLA	chr14:97022719-97031320	+	ES_MULTI	138	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,63,75,29	97022750,97026986,97027048,97029156,97029230,97031292	No	Yes	No	bcc_19807|Cycle_1|Type_1	31,29	97022750,97031292	psi1:0.8,psi2:1.0	C1_20,C2_70	C1_5,C2_0	Yes
ENSG00000171552	BCL2L1	chr20:30310102-30310451	-	altA	18	No	-	protein_coding	all_splice_sites_known_(3_ss)	49,31	30310151,30310421	No	No	No	bcc_51800|Cycle_0|Type_1	31,31	30310133,30310421	psi1:0.458333333333,psi2:0.842105263158	C1_11,C2_16	C1_13,C2_3	Yes
ENSG00000124193	SRSF6	chr20:42088031-42088441	+	IR	350	Yes	Yes	protein_coding	no_known_ss	410	-	No	No	No	bcc_28584|Cycle_0|Type_1	29,31	42088060,42088411	psi1:0.65,psi2:0.948717948718	C1_13,C2_37	C1_7,C2_2	Yes
ENSG00000197622	CDC42SE1	chr1:151027572-151028183	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):151028153,151027602	33,31	151027605,151028153	No	No	No	bcc_8474|Cycle_0|Type_1	30,31	151027602,151028153	psi1:0,psi2:0.222222222222	C1_0,C2_2	C1_16,C2_7	Yes
ENSG00000123179	EBPL	chr13:50237300-50265419	-	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,70,30	50237331,50243913,50243982,50265390	No	Yes	No	bcc_37651|Cycle_1|Type_1	31,30	50237331,50265390	psi1:0.333333333333,psi2:0.910714285714	C1_1,C2_51	C1_2,C2_5	Yes
ENSG00000197841	ZNF181	chr19:35230142-35230459	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	35230173,35230428	No	No	No	bcc_22761|Cycle_0|Type_1	31,29	35230173,35230431	psi1:0,psi2:0.5	C1_0,C2_9	C1_4,C2_9	Yes
ENSG00000100413	POLR3H	chr22:41928131-41928693	-	altD	55	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,86	41928161,41928608	No	No	No	bcc_22019|Cycle_0|Type_1	30,31	41928161,41928663	psi1:0.28,psi2:0.0212765957447	C1_7,C2_1	C1_18,C2_46	Yes
ENSG00000147687	TATDN1	chr8:125528241-125531085	-	altD	76	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,103	125528271,125530983	No	No	No	bcc_53955|Cycle_0|Type_1	30,27	125528271,125531059	psi1:0.172413793103,psi2:0.545454545455	C1_5,C2_12	C1_24,C2_10	Yes
ENSG00000159131	GART	chr21:34877978-34882119	-	ES	131	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,131,30	34878009,34878281,34878411,34882090	No	No	No	bcc_26959|Cycle_0|Type_1	31,30	34878009,34882090	psi1:0.818181818182,psi2:1.0	C1_9,C2_49	C1_2,C2_0	Yes
ENSG00000170581	STAT2	chr12:56749286-56749521	+	IR	175	Yes	Yes	protein_coding	no_known_ss	235	-	No	No	No	bcc_14478|Cycle_0|Type_1	30,30	56749316,56749492	psi1:0.513513513514,psi2:0.0769230769231	C1_19,C2_1	C1_18,C2_12	(CT:56749316,AC:56749492)
ENSG00000144674	GOLGA4	chr3:37396648-37407599	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,63,29	37396678,37402734,37402796,37407571	No	Yes	No	bcc_39603|Cycle_0|Type_1	30,29	37396678,37407571	psi1:1.0,psi2:0.523076923077	C1_16,C2_34	C1_0,C2_31	Yes
ENSG00000142192	APP	chr21:27354759-27394186	-	ES_MULTI	225	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,57,168,31	27354790,27369675,27369731,27372330,27372497,27394156	No	Yes	Yes	bcc_38343|Cycle_226|Type_1	31,31	27354790,27394156	psi1:0.606936416185,psi2:0.995215311005	C1_315,C2_208	C1_204,C2_1	Yes
ENSG00000099783	HNRNPM	chr19:8539097-8550516	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,30	8539128,8548042,8548095,8550487	No	No	No	bcc_24033|Cycle_0|Type_1	31,30	8539128,8550487	psi1:0.984615384615,psi2:0.723404255319	C1_64,C2_34	C1_1,C2_13	Yes
ENSG00000182196	ARL6IP4	chr12:123465815-123466171	+	altA	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,54	123465846,123466118	No	Yes	No	bcc_899|Cycle_2|Type_1	31,30	123465846,123466142	psi1:0.230769230769,psi2:0.615384615385	C1_3,C2_8	C1_10,C2_5	Yes
ENSG00000127527	EPS15L1	chr19:16472765-16495970	-	ES	133	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,133,31	16472795,16487933,16488065,16495940	No	No	No	bcc_57907|Cycle_2|Type_1	30,31	16472795,16495940	psi1:1.0,psi2:0.777777777778	C1_15,C2_7	C1_0,C2_2	Yes
ENSG00000100577	GSTZ1	chr14:77793864-77795496	+	ES	126	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,126,31	77793895,77794255,77794380,77795466	No	No	No	bcc_42387|Cycle_0|Type_1	31,31	77793895,77795466	psi1:0.761904761905,psi2:0.987951807229	C1_16,C2_82	C1_5,C2_1	Yes
ENSG00000205726	ITSN1	chr21:35191598-35201957	+	ES_MULTI	213	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,167,46,30	35191627,35195791,35195957,35199122,35199167,35201928	No	No	No	bcc_49409|Cycle_0|Type_1	29,30	35191627,35201928	psi1:0.970588235294,psi2:0.695652173913	C1_33,C2_16	C1_1,C2_7	Yes
ENSG00000108384	RAD51C	chr17:56801430-56809873	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	56801461,56809842	No	No	No	bcc_52092|Cycle_0|Type_1	31,29	56801461,56809845	psi1:0.0769230769231,psi2:0.4	C1_1,C2_4	C1_12,C2_6	Yes
ENSG00000148120	C9orf3	chr9:97843032-97848992	+	ES	145	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,145,29	97843062,97844857,97845001,97848964	No	No	No	bcc_61339|Cycle_0|Type_1	30,29	97843062,97848964	psi1:0.434782608696,psi2:0.813953488372	C1_10,C2_35	C1_13,C2_8	Yes
ENSG00000092098	RNF31	chr14:24618056-24618713	+	altA	71	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,99	24618085,24618615	No	No	No	bcc_68952|Cycle_0|Type_1	29,28	24618085,24618686	psi1:1.0,psi2:0.75	C1_9,C2_6	C1_0,C2_2	Yes
ENSG00000117480	FAAH	chr1:46871146-46871318	+	altA	31	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,59	46871177,46871260	No	No	No	bcc_57244|Cycle_0|Type_1	31,28	46871177,46871291	psi1:1.0,psi2:0.75	C1_9,C2_6	C1_0,C2_2	Yes
ENSG00000101460	MAP1LC3A	chr20:33147953-33148018	-	deletion	8	Yes	-	protein_coding	no_known_ss	65	33147953	No	No	No	bcc_39046|Cycle_1|Type_1	30,27	33147983,33147992	psi1:0.7,psi2:1.0	C1_7,C2_7	C1_3,C2_0	-
ENSG00000070610	GBA2	chr9:35738119-35738258	-	IR	79	Yes	Yes	protein_coding	no_known_ss	139	-	No	No	No	bcc_53799|Cycle_0|Type_1	30,30	35738149,35738229	psi1:0.435897435897,psi2:0.0769230769231	C1_17,C2_2	C1_22,C2_24	Yes
ENSG00000169891	REPS2	chrX:17088086-17121867	+	ES_MULTI	183	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,46,137,27	17088116,17092237,17092282,17095394,17095530,17121841	No	No	No	bcc_28862|Cycle_0|Type_1	30,27	17088116,17121841	psi1:0.933333333333,psi2:0.615384615385	C1_14,C2_8	C1_1,C2_5	Yes
ENSG00000071889	FAM3A	chrX:153735791-153736650	-	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,72,31	153735821,153736142,153736213,153736620	No	Yes	No	bcc_17502|Cycle_1|Type_1	30,31	153735821,153736620	psi1:0.6875,psi2:1.0	C1_11,C2_10	C1_5,C2_0	Yes
ENSG00000168958	MFF	chr2:228205067-228220423	+	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,75,31	228205096,228207461,228207535,228220393	No	Yes	No	bcc_45905|Cycle_3|Type_1	29,31	228205096,228220393	psi1:0.541666666667,psi2:0.170212765957	C1_13,C2_8	C1_11,C2_39	Yes
ENSG00000260669,ENSG00000213920,ENSG00000255526	AL136419.6,MDP1,NEDD8-MDP1	chr14:24683327-24683544	-	altD	48	No	-	processed_transcript,protein_coding,protein_coding	all_splice_sites_known_(3_ss)	30,77	24683357,24683468	No	No	No	bcc_63825|Cycle_0|Type_1	30,29	24683357,24683516	psi1:0.444444444444,psi2:0	C1_8,C2_0	C1_10,C2_5	Yes
ENSG00000126214	KLC1	chr14:104145825-104167022	+	ES	131	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,131,31	104145855,104153418,104153548,104166992	No	Yes	No	bcc_42941|Cycle_3|Type_1	30,31	104145855,104166992	psi1:0.666666666667,psi2:1.0	C1_10,C2_8	C1_5,C2_0	Yes
ENSG00000149547	EI24	chr11:125450069-125452270	+	ES	112	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,112,29	125450100,125451107,125451218,125452242	No	No	No	bcc_22933|Cycle_0|Type_1	31,29	125450100,125452242	psi1:0.829787234043,psi2:1.0	C1_39,C2_260	C1_8,C2_0	Yes
ENSG00000101158	NELFCD	chr20:57568701-57569192	+	altD	89	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	118,28	57568819,57569165	No	No	No	bcc_43951|Cycle_0|Type_1	29,28	57568730,57569165	psi1:0.8,psi2:1.0	C1_24,C2_68	C1_6,C2_0	Yes
ENSG00000267120,ENSG00000161265	AD000671.6,U2AF1L4	chr19:36236057-36236279	-	altA	25	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	56,31	36236113,36236249	No	No	No	bcc_1326|Cycle_0|Type_1	31,31	36236088,36236249	psi1:0.733333333333,psi2:0	C1_11,C2_0	C1_4,C2_1	Yes
ENSG00000166780	C16orf45	chr16:15677064-15681383	+	altA	779	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,810	15677095,15680574	No	No	No	bcc_33420|Cycle_0|Type_1	31,31	15677095,15681353	psi1:1.0,psi2:0.846153846154	C1_433,C2_22	C1_0,C2_4	Yes
ENSG00000172594	SMPDL3A	chr6:123126205-123130265	+	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,125,30	123126234,123127378,123127502,123130236	No	No	No	bcc_31258|Cycle_0|Type_1	29,30	123126234,123130236	psi1:0.842105263158,psi2:1.0	C1_16,C2_194	C1_3,C2_0	Yes
ENSG00000196235	SUPT5H	chr19:39948349-39949485	+	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,12,28	39948380,39948934,39948945,39949458	No	No	No	bcc_55038|Cycle_0|Type_1	31,28	39948380,39949458	psi1:0.45,psi2:0.952380952381	C1_45,C2_20	C1_55,C2_1	Yes
ENSG00000148057	IDNK	chr9:86238105-86243818	+	ES	31	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,31,31	86238136,86243096,86243126,86243788	No	No	No	bcc_53420|Cycle_0|Type_1	31,31	86238136,86243788	psi1:0.333333333333,psi2:0.714285714286	C1_4,C2_10	C1_8,C2_4	Yes
ENSG00000128829	EIF2AK4	chr15:40322628-40324988	+	ES	69	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,69,31	40322657,40324370,40324438,40324958	No	No	No	bcc_22372|Cycle_0|Type_1	29,31	40322657,40324958	psi1:1.0,psi2:0.739130434783	C1_21,C2_17	C1_0,C2_6	Yes
ENSG00000157103	SLC6A1	chr3:11057392-11058834	+	altA	61	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	27,90	11057419,11058745	No	No	No	bcc_36383|Cycle_0|Type_1	27,29	11057419,11058806	psi1:0.529411764706,psi2:0.9	C1_9,C2_9	C1_8,C2_1	Yes
ENSG00000145730	PAM	chr5:102296902-102326005	+	ES	321	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,321,30	102296933,102309820,102310140,102325976	No	No	No	bcc_49317|Cycle_0|Type_1	31,30	102296933,102325976	psi1:0.967741935484,psi2:0.666666666667	C1_120,C2_10	C1_4,C2_5	Yes
ENSG00000254413	CHKB-CPT1B	chr22:51018671-51018816	-	IR	86	Yes	Yes	protein_coding	no_known_ss	145	-	No	No	No	bcc_59911|Cycle_0|Type_1	29,30	51018700,51018787	psi1:0.785714285714,psi2:0.416666666667	C1_11,C2_5	C1_3,C2_7	Yes
ENSG00000197226	TBC1D9B	chr5:179292860-179294808	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,51,31	179292888,179294445,179294495,179294778	No	No	No	bcc_42555|Cycle_0|Type_1	28,31	179292888,179294778	psi1:0.686746987952,psi2:0.210526315789	C1_57,C2_4	C1_26,C2_15	Yes
ENSG00000178188	SH2B1	chr16:28883996-28884520	+	altD	53	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	83,30	28884079,28884491	No	No	No	bcc_69179|Cycle_0|Type_1	30,30	28884026,28884491	psi1:0.714285714286,psi2:0	C1_10,C2_0	C1_4,C2_1	Yes
ENSG00000125912	NCLN	chr19:3206157-3206292	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	3206188,3206260	No	No	No	bcc_68431|Cycle_0|Type_1	31,30	3206188,3206263	psi1:0.818181818182,psi2:0.454545454545	C1_9,C2_5	C1_2,C2_6	Yes
ENSG00000115421	PAPOLG	chr2:61014170-61018926	+	ES	110	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,110,31	61014201,61014646,61014755,61018896	No	No	No	bcc_60716|Cycle_0|Type_1	31,31	61014201,61018896	psi1:0.75,psi2:1.0	C1_6,C2_8	C1_2,C2_0	Yes
ENSG00000110888	CAPRIN2	chr12:30863375-30864529	-	altA	44	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	73,30	30863448,30864500	No	No	No	bcc_58623|Cycle_0|Type_1	29,30	30863404,30864500	psi1:0.6,psi2:0.2	C1_12,C2_2	C1_8,C2_8	Yes
ENSG00000166167	BTRC	chr10:103313688-103313759	+	deletion	9	No	-	protein_coding	no_known_ss	71	103313688	No	No	No	bcc_50505|Cycle_0|Type_1	31,31	103313719,103313729	psi1:0.428571428571,psi2:1.0	C1_3,C2_1	C1_4,C2_0	-
ENSG00000126214	KLC1	chr14:104153517-104167022	+	ES	67	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,67,31	104153548,104158696,104158762,104166992	No	Yes	No	bcc_42941|Cycle_2|Type_1	31,31	104153548,104166992	psi1:0.5,psi2:1.0	C1_5,C2_2	C1_5,C2_0	Yes
ENSG00000155849	ELMO1	chr7:37136301-37251020	-	ES	105	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,105,30	37136332,37172735,37172839,37250991	No	No	No	bcc_22521|Cycle_0|Type_1	31,30	37136332,37250991	psi1:1.0,psi2:0.818181818182	C1_33,C2_9	C1_0,C2_2	Yes
ENSG00000139746	RBM26	chr13:79940303-79940798	-	altA	30	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):79940768,79940330	57,31	79940360,79940768	No	No	No	bcc_1151|Cycle_0|Type_1	27,31	79940330,79940768	psi1:0.571428571429,psi2:1.0	C1_4,C2_2	C1_3,C2_0	Yes
ENSG00000105518	TMEM205	chr19:11456383-11456833	+	IR	389	Yes	-	protein_coding	no_known_ss	450	-	No	Yes	No	bcc_63141|Cycle_9|Type_1	30,31	11456413,11456803	psi1:0.910447761194,psi2:0.5625	C1_61,C2_9	C1_6,C2_7	(CT:11456413,AC:11456803)
ENSG00000188732	FAM221A	chr7:23731184-23740433	+	ES	108	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,108,29	23731215,23737811,23737918,23740405	No	Yes	No	bcc_16082|Cycle_0|Type_1	31,29	23731215,23740405	psi1:0.466666666667,psi2:0.833333333333	C1_7,C2_10	C1_8,C2_2	Yes
ENSG00000138443	ABI2	chr2:204255835-204260408	+	ES	147	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,147,30	204255866,204259423,204259569,204260379	No	Yes	No	bcc_7219|Cycle_2|Type_1	31,30	204255866,204260379	psi1:0.636363636364,psi2:1.0	C1_14,C2_9	C1_8,C2_0	Yes
ENSG00000008294	SPAG9	chr17:49052277-49054498	-	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,39,30	49052308,49053224,49053262,49054469	No	No	No	bcc_7969|Cycle_0|Type_1	31,30	49052308,49054469	psi1:0.84126984127,psi2:0.428571428571	C1_53,C2_6	C1_10,C2_8	Yes
ENSG00000185127	C6orf120	chr6:170105387-170105741	+	IR	294	No	Yes	protein_coding	no_known_ss	354	-	No	No	No	bcc_34530|Cycle_1|Type_1	30,30	170105417,170105712	psi1:1.0,psi2:0.696629213483	C1_54,C2_62	C1_0,C2_27	(CT:170105417,AC:170105712)
ENSG00000131018	SYNE1	chr6:152443781-152453287	-	ES	59	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,59,31	152443811,152451855,152451913,152453257	No	No	No	bcc_30388|Cycle_0|Type_1	30,31	152443811,152453257	psi1:0.36,psi2:0.833333333333	C1_9,C2_5	C1_16,C2_1	Yes
ENSG00000133641	C12orf29	chr12:88429484-88436630	+	ES	118	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,118,29	88429515,88433925,88434042,88436602	No	No	No	bcc_29332|Cycle_0|Type_1	31,29	88429515,88436602	psi1:0.541666666667,psi2:0.916666666667	C1_13,C2_11	C1_11,C2_1	Yes
ENSG00000184014	DENND5A	chr11:9161371-9163551	-	altD	34	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,65	9161401,9163487	No	No	No	bcc_41862|Cycle_0|Type_1	30,31	9161401,9163521	psi1:0.973684210526,psi2:0.7	C1_74,C2_7	C1_2,C2_3	(AC:9163487,CT:9161401);(GC:9163521,CT:9161401)
ENSG00000104450	SPAG1	chr8:101245734-101252659	+	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,165,29	101245765,101251468,101251632,101252631	No	No	No	bcc_60242|Cycle_0|Type_1	31,29	101245765,101252631	psi1:1.0,psi2:0.777777777778	C1_12,C2_7	C1_0,C2_2	Yes
ENSG00000135678	CPM	chr12:69263247-69265594	-	ES	185	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,185,31	69263275,69263995,69264179,69265564	No	No	No	bcc_9907|Cycle_0|Type_1	28,31	69263275,69265564	psi1:0.8,psi2:1.0	C1_12,C2_28	C1_3,C2_0	Yes
ENSG00000124120	TTPAL	chr20:43122833-43122894	-	deletion	3	No	-	protein_coding	no_known_ss	61	43122833	No	No	No	bcc_20030|Cycle_0|Type_1	27,31	43122860,43122864	psi1:1.0,psi2:0.491525423729	C1_11,C2_29	C1_0,C2_30	-
ENSG00000019144	PHLDB1	chr11:118495744-118498053	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	118495775,118498021	No	No	No	bcc_68568|Cycle_0|Type_1	31,30	118495775,118498024	psi1:0.692307692308,psi2:0	C1_9,C2_0	C1_4,C2_1	Yes
ENSG00000160285	LSS	chr21:47615640-47625780	-	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,66,31	47615670,47616116,47616181,47625750	No	No	No	bcc_36130|Cycle_0|Type_1	30,31	47615670,47625750	psi1:0.7,psi2:1.0	C1_7,C2_6	C1_3,C2_0	Yes
ENSG00000269749,ENSG00000197782	AC005614.5,ZNF780A	chr19:40587791-40589048	-	altA	3	No	Yes	processed_transcript,protein_coding	all_splice_sites_known_(3_ss)	33,31	40587824,40589018	No	No	No	bcc_24689|Cycle_0|Type_1	30,31	40587821,40589018	psi1:0.142857142857,psi2:0.571428571429	C1_1,C2_12	C1_6,C2_9	Yes
ENSG00000239779	WBP1	chr2:74685767-74686800	+	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,125,31	74685798,74686565,74686689,74686770	Yes	Yes	No	bcc_63203|Cycle_0|Type_1	31,31	74685798,74686770	psi1:0.8,psi2:0.2	C1_48,C2_1	C1_12,C2_4	Yes
ENSG00000132424	PNISR	chr6:99862536-99873121	-	ES	80	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,80,31	99862566,99864225,99864304,99873091	No	Yes	No	bcc_35680|Cycle_0|Type_1	30,31	99862566,99873091	psi1:0.684210526316,psi2:1.0	C1_13,C2_10	C1_6,C2_0	Yes
ENSG00000131626	PPFIA1	chr11:70194495-70200437	+	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,30,31	70194526,70197100,70197129,70200407	No	No	No	bcc_44008|Cycle_0|Type_1	31,31	70194526,70200407	psi1:0.352941176471,psi2:0	C1_6,C2_0	C1_11,C2_7	Yes
ENSG00000047249	ATP6V1H	chr8:54714425-54727251	-	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,30	54714456,54723724,54723777,54727222	No	No	No	bcc_48087|Cycle_0|Type_1	31,30	54714456,54727222	psi1:0.26618705036,psi2:0.823529411765	C1_37,C2_14	C1_102,C2_3	Yes
ENSG00000115661	STK16	chr2:220111570-220112165	+	ES	134	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,134,29	220111598,220111835,220111968,220112137	No	No	No	bcc_60793|Cycle_0|Type_1	28,29	220111598,220112137	psi1:0.8,psi2:1.0	C1_24,C2_52	C1_6,C2_0	Yes
ENSG00000133226	SRRM1	chr1:24981583-24987238	+	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	37,29	24981620,24987210	No	No	No	bcc_16711|Cycle_1|Type_1	31,29	24981614,24987210	psi1:0.846153846154,psi2:0.5	C1_22,C2_7	C1_4,C2_7	Yes
ENSG00000081189	MEF2C	chr5:88018616-88024338	-	altA	96	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	126,29	88018742,88024310	No	Yes	No	bcc_32516|Cycle_0|Type_1	30,29	88018646,88024310	psi1:0.761904761905,psi2:0.166666666667	C1_48,C2_1	C1_15,C2_5	Yes
ENSG00000129103	SUMF2	chr7:56140773-56144555	+	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,29	56140804,56141867,56141911,56144527	No	Yes	No	bcc_15514|Cycle_3|Type_1	31,29	56140804,56144527	psi1:0.764705882353,psi2:1.0	C1_13,C2_18	C1_4,C2_0	Yes
ENSG00000196914	ARHGEF12	chr11:120278501-120291491	+	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,57,30	120278532,120280103,120280159,120291462	No	No	No	bcc_11341|Cycle_0|Type_1	31,30	120278532,120291462	psi1:0.888888888889,psi2:0.545454545455	C1_32,C2_6	C1_4,C2_5	Yes
ENSG00000164162	ANAPC10	chr4:145916725-146002842	-	ES	121	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,121,31	145916755,145985724,145985844,146002812	No	No	No	bcc_25057|Cycle_0|Type_1	30,31	145916755,146002812	psi1:0.733333333333,psi2:1.0	C1_22,C2_23	C1_8,C2_0	Yes
ENSG00000108651	UTP6	chr17:30214301-30219309	-	ES	119	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,119,31	30214332,30216304,30216422,30219279	No	No	No	bcc_57517|Cycle_1|Type_1	31,31	30214332,30219279	psi1:0.8,psi2:1.0	C1_8,C2_17	C1_2,C2_0	Yes
ENSG00000119321	FKBP15	chr9:115927987-115928048	-	deletion	3	No	-	protein_coding	no_known_ss	61	115927987	No	No	No	bcc_76053|Cycle_0|Type_1	27,31	115928014,115928018	psi1:1.0,psi2:0.526315789474	C1_4,C2_10	C1_0,C2_9	-
ENSG00000138814	PPP3CA	chr4:101947188-101953451	-	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,30,28	101947218,101950323,101950352,101953424	No	No	No	bcc_26703|Cycle_0|Type_1	30,28	101947218,101953424	psi1:0.891050583658,psi2:0	C1_229,C2_0	C1_28,C2_5	Yes
ENSG00000089053	ANAPC5	chr12:121766231-121768416	-	altA	39	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	69,31	121766300,121768386	No	No	No	bcc_47239|Cycle_0|Type_1	30,31	121766261,121768386	psi1:0.924528301887,psi2:0.62962962963	C1_49,C2_17	C1_4,C2_10	Yes
ENSG00000183077	AFMID	chr17:76198801-76202055	+	ES_MULTI	386	Yes	Yes	protein_coding	all_splice_sites_known_(10_ss)	31,73,98,79,136,29	76198832,76200909,76200981,76201174,76201271,76201521,76201599,76201684,76201819,76202027	No	Yes	No	bcc_3143|Cycle_76|Type_1	31,29	76198832,76202027	psi1:0.333333333333,psi2:0.837837837838	C1_4,C2_93	C1_8,C2_18	Yes
ENSG00000130177	CDC16	chr13:115037926-115038066	+	IR	82	Yes	-	protein_coding	no_known_ss	140	-	No	No	No	bcc_47793|Cycle_0|Type_1	30,28	115037956,115038039	psi1:0.980392156863,psi2:0.72	C1_50,C2_36	C1_1,C2_14	Yes
ENSG00000183077	AFMID	chr17:76187110-76203018	+	ES_MULTI	154	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,105,49,27	76187141,76198580,76198684,76198784,76198832,76202992	No	Yes	No	bcc_3143|Cycle_46|Type_1	31,27	76187141,76202992	psi1:0.647058823529,psi2:0.958620689655	C1_11,C2_139	C1_6,C2_6	Yes
ENSG00000183077	AFMID	chr17:76198803-76201549	+	ES_MULTI	171	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,73,98,29	76198832,76200909,76200981,76201174,76201271,76201521	No	Yes	No	bcc_3143|Cycle_119|Type_1	29,29	76198832,76201521	psi1:0.666666666667,psi2:0.96875	C1_2,C2_31	C1_1,C2_1	Yes
ENSG00000112983	BRD8	chr5:137501769-137503653	-	ES	210	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,210,31	137501797,137502207,137502416,137503623	No	No	No	bcc_39591|Cycle_0|Type_1	28,31	137501797,137503623	psi1:1.0,psi2:0.761904761905	C1_20,C2_16	C1_0,C2_5	Yes
ENSG00000073584	SMARCE1	chr17:38793793-38801858	-	ES	105	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,105,31	38793824,38798707,38798811,38801828	No	No	No	bcc_38492|Cycle_0|Type_1	31,31	38793824,38801828	psi1:0.8125,psi2:1.0	C1_13,C2_31	C1_3,C2_0	Yes
ENSG00000179912	R3HDM2	chr12:57682794-57689211	-	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,96,30	57682823,57686355,57686450,57689182	No	No	No	bcc_22798|Cycle_0|Type_1	29,30	57682823,57689182	psi1:0.828571428571,psi2:0.454545454545	C1_29,C2_5	C1_6,C2_6	Yes
ENSG00000122034	GTF3A	chr13:28004728-28008306	+	ES	74	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,74,31	28004758,28006868,28006941,28008276	No	No	No	bcc_44927|Cycle_0|Type_1	30,31	28004758,28008276	psi1:0.814159292035,psi2:1.0	C1_92,C2_224	C1_21,C2_0	Yes
ENSG00000225339	RP11-513I15.6	chr6:34249255-34249316	-	deletion	3	No	-	lincRNA	no_known_ss	61	34249255	No	No	No	bcc_22091|Cycle_0|Type_1	27,31	34249282,34249286	psi1:0.55,psi2:0	C1_66,C2_0	C1_54,C2_17	-
ENSG00000136478	TEX2	chr17:62232291-62238191	-	altA	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	36,31	62232327,62238161	No	No	No	bcc_49124|Cycle_0|Type_1	30,31	62232321,62238161	psi1:0.644444444444,psi2:1.0	C1_29,C2_17	C1_16,C2_0	Yes
ENSG00000068308	OTUD5	chrX:48780156-48780443	-	IR	226	Yes	-	protein_coding	no_known_ss	287	-	No	No	No	bcc_31764|Cycle_0|Type_1	31,30	48780187,48780414	psi1:1.0,psi2:0.826923076923	C1_134,C2_43	C1_0,C2_9	Yes
ENSG00000101457	DNTTIP1	chr20:44421367-44422655	+	IR	59	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):44422560,44421386	19,96	-	No	No	No	bcc_67127|Cycle_0|Type_1	19,6,31	44421386,44422560,44422565,44422625	psi1:1.0,psi2:0.777777777778	C1_10,C2_7	C1_0,C2_2	(AG:44422565,GG:44422625);(GT:44421386,AG:44422560)
ENSG00000224597	PTCHD3P1	chr10:29698556-29704315	+	altD	25	Yes	-	antisense	all_splice_sites_known_(3_ss)	56,30	29698612,29704286	No	No	No	bcc_33059|Cycle_0|Type_1	31,30	29698587,29704286	psi1:0.739130434783,psi2:0.363636363636	C1_17,C2_4	C1_6,C2_7	Yes
ENSG00000152620	NADK2	chr5:36207336-36211976	-	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,66,31	36207367,36208727,36208792,36211946	No	No	No	bcc_4376|Cycle_0|Type_1	31,31	36207367,36211946	psi1:0.108695652174,psi2:0.535483870968	C1_5,C2_83	C1_41,C2_72	Yes
ENSG00000168958	MFF	chr2:228205067-228220423	+	ES_MULTI	294	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	29,75,159,60,31	228205096,228207461,228207535,228211942,228212100,228217230,228217289,228220393	No	Yes	No	bcc_45905|Cycle_2|Type_1	29,31	228205096,228220393	psi1:0.895238095238,psi2:0.58064516129	C1_94,C2_54	C1_11,C2_39	Yes
ENSG00000182196	ARL6IP4	chr12:123465782-123466171	+	altD	33	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	64,30	123465846,123466142	No	Yes	No	bcc_899|Cycle_10|Type_1	31,30	123465813,123466142	psi1:0.148936170213,psi2:0.52	C1_14,C2_13	C1_80,C2_12	Yes
ENSG00000169490	TM2D2	chr8:38852893-38853761	-	altA	288	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	319,30	38853212,38853732	No	Yes	No	bcc_54143|Cycle_1|Type_1	31,30	38852924,38853732	psi1:0.80487804878,psi2:0.4375	C1_33,C2_7	C1_8,C2_9	Yes
ENSG00000178498	DTX3	chr12:58000270-58000697	+	altA	19	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,50	58000301,58000648	No	No	No	bcc_64833|Cycle_0|Type_1	31,31	58000301,58000667	psi1:0.816326530612,psi2:0.25	C1_40,C2_1	C1_9,C2_3	Yes
ENSG00000135316	SYNCRIP	chr6:86350253-86352545	-	ES	160	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	29,160,31	86350282,86351010,86351169,86352515	No	No	No	bcc_39732|Cycle_2|Type_1	29,31	86350282,86352515	psi1:0.771929824561,psi2:1.0	C1_44,C2_56	C1_13,C2_0	Yes
ENSG00000133422	MORC2	chr22:31322829-31324044	-	altD	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,39	31322858,31324006	No	No	No	bcc_79513|Cycle_0|Type_1	29,30	31322858,31324015	psi1:0.857142857143,psi2:0.5	C1_6,C2_6	C1_1,C2_6	Yes
ENSG00000124444,ENSG00000226763	ZNF576,SRRM5	chr19:44100864-44101278	+	altA	3	No	-	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	31,33	44100895,44101246	No	No	No	bcc_58638|Cycle_0|Type_1	31,30	44100895,44101249	psi1:0.727272727273,psi2:1.0	C1_8,C2_7	C1_3,C2_0	Yes
ENSG00000186919	ZACN	chr17:74078084-74078207	-	IR	66	No	Yes	protein_coding	no_known_ss	123	-	No	No	No	bcc_52709|Cycle_0|Type_1	31,26	74078115,74078182	psi1:0.8,psi2:1.0	C1_8,C2_14	C1_2,C2_0	(GC:74078182,CT:74078115)
ENSG00000225484	RP11-773D16.1	chr10:81564253-81574399	-	ES_MULTI	158	Yes	-	lincRNA	all_splice_sites_known_(6_ss)	30,84,74,31	81564283,81565795,81565878,81568515,81568588,81574369	No	No	No	bcc_14876|Cycle_0|Type_1	30,31	81564283,81574369	psi1:0.615384615385,psi2:0.911764705882	C1_16,C2_31	C1_10,C2_3	Yes
ENSG00000239779	WBP1	chr2:74685767-74686799	+	ES	115	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,115,30	74685798,74686565,74686679,74686770	Yes	Yes	No	bcc_63203|Cycle_7|Type_1	31,30	74685798,74686770	psi1:0.764705882353,psi2:0.2	C1_39,C2_1	C1_12,C2_4	Yes
ENSG00000105426	PTPRS	chr19:5215575-5218461	-	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,48,31	5215606,5216731,5216778,5218431	No	No	No	bcc_17992|Cycle_0|Type_1	31,31	5215606,5218431	psi1:0.529411764706,psi2:0.142857142857	C1_9,C2_1	C1_8,C2_6	Yes
ENSG00000143207	RFWD2	chr1:176132093-176132993	-	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,43	176132124,176132951	No	No	No	bcc_43127|Cycle_0|Type_1	31,31	176132124,176132963	psi1:0.666666666667,psi2:0.285714285714	C1_4,C2_4	C1_2,C2_10	Yes
ENSG00000233901	RP11-65J3.1	chr9:132102549-132102613	-	deletion	3	No	-	lincRNA	no_known_ss	64	132102549	No	Yes	No	bcc_25021|Cycle_45|Type_1	30,31	132102579,132102583	psi1:0.714285714286,psi2:1.0	C1_5,C2_4	C1_2,C2_0	-
ENSG00000054983	GALC	chr14:88399856-88399921	-	deletion	3	No	-	protein_coding	no_known_ss	65	88399856	No	No	No	bcc_44672|Cycle_0|Type_1	31,31	88399887,88399891	psi1:0.481481481481,psi2:0	C1_26,C2_0	C1_28,C2_10	-
ENSG00000153827	TRIP12	chr2:230670489-230672454	-	altAD	84	No	-	protein_coding	3_ss_annotated_(over_4_ss):230672424,230670518,230670599	110,34	230670599,230672421	No	Yes	No	bcc_16468|Cycle_2|Type_1	29,31	230670518,230672424	psi1:0.736842105263,psi2:1.0	C1_14,C2_13	C1_5,C2_0	Yes
ENSG00000004897	CDC27	chr17:45247377-45258958	-	ES	148	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,148,31	45247408,45249283,45249430,45258928	No	No	No	bcc_9540|Cycle_0|Type_1	31,31	45247408,45258928	psi1:1.0,psi2:0.8125	C1_27,C2_13	C1_0,C2_3	Yes
ENSG00000143393	PI4KB	chr1:151280246-151288079	-	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,31	151280277,151282687,151282731,151288049	No	No	No	bcc_62977|Cycle_0|Type_1	31,31	151280277,151288049	psi1:0.4375,psi2:0.1	C1_7,C2_1	C1_9,C2_9	Yes
ENSG00000115216	NRBP1	chr2:27658064-27659648	+	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,24,29	27658094,27658590,27658613,27659620	No	No	No	bcc_51201|Cycle_0|Type_1	30,29	27658094,27659620	psi1:0.24,psi2:0	C1_6,C2_0	C1_19,C2_21	Yes
ENSG00000102024	PLS3	chrX:114871259-114874747	+	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,28	114871290,114874422,114874448,114874720	No	No	No	bcc_14383|Cycle_0|Type_1	31,28	114871290,114874720	psi1:0.219512195122,psi2:0	C1_9,C2_0	C1_32,C2_43	Yes
ENSG00000107863	ARHGAP21	chr10:24878201-24880184	-	ES	274	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,274,31	24878231,24879135,24879408,24880154	No	No	No	bcc_43457|Cycle_0|Type_1	30,31	24878231,24880154	psi1:0.681481481481,psi2:0.0769230769231	C1_92,C2_1	C1_43,C2_12	Yes
ENSG00000163660	CCNL1	chr3:156866347-156867304	-	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,99,31	156866378,156867076,156867174,156867274	No	No	No	bcc_14960|Cycle_0|Type_1	31,31	156866378,156867274	psi1:0.818181818182,psi2:1.0	C1_27,C2_60	C1_6,C2_0	Yes
ENSG00000168906	MAT2A	chr2:85769841-85770052	+	IR	153	No	Yes	protein_coding	no_known_ss	211	-	No	No	No	bcc_24587|Cycle_0|Type_1	29,29	85769870,85770024	psi1:0.555555555556,psi2:0.212765957447	C1_20,C2_10	C1_16,C2_37	Yes
ENSG00000215845	TSTD1	chr1:161008395-161008699	-	altA	39	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):161008670,161008463	68,30	161008463,161008670	No	No	No	bcc_79723|Cycle_0|Type_1	29,30	161008424,161008670	psi1:0.5,psi2:1.0	C1_3,C2_1	C1_3,C2_0	Yes
ENSG00000104728	ARHGEF10	chr8:1844584-1846630	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	1844615,1846599	No	No	No	bcc_72228|Cycle_0|Type_1	31,29	1844615,1846602	psi1:0.5,psi2:1.0	C1_3,C2_1	C1_3,C2_0	Yes
ENSG00000007341	ST7L	chr1:113153594-113161561	-	ES	32	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,32,31	113153625,113159435,113159466,113161531	No	Yes	No	bcc_71140|Cycle_3|Type_1	31,31	113153625,113161531	psi1:0.75,psi2:1.0	C1_6,C2_6	C1_2,C2_0	Yes
ENSG00000086015	MAST2	chr1:46499579-46499776	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):46499745,46499610	31,32	46499610,46499745	No	No	No	bcc_67990|Cycle_0|Type_1	31,29	46499610,46499748	psi1:0.7,psi2:1.0	C1_7,C2_5	C1_3,C2_0	Yes
ENSG00000165792	METTL17	chr14:21464839-21464998	-	IR	100	Yes	Yes	protein_coding	no_known_ss	159	-	No	Yes	No	bcc_53225|Cycle_1|Type_1	31,28	21464870,21464971	psi1:1.0,psi2:0.75	C1_6,C2_6	C1_0,C2_2	(AG:21464971,GT:21464870)
ENSG00000115355	CCDC88A	chr2:55555539-55559732	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	55555571,55559702	No	No	No	bcc_39708|Cycle_0|Type_1	29,31	55555568,55559702	psi1:0.75,psi2:0	C1_15,C2_0	C1_5,C2_1	Yes
ENSG00000165312	OTUD1	chr10:23730298-23730622	-	IR	265	Yes	-	protein_coding	no_known_ss	324	-	No	No	No	bcc_36083|Cycle_0|Type_1	28,31	23730326,23730592	psi1:1.0,psi2:0.833333333333	C1_30,C2_10	C1_0,C2_2	(GA:23730592,TT:23730326)
ENSG00000100697	DICER1	chr14:95557672-95560253	-	ES	25	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):95560225,95557702	30,25,29	95557702,95558906,95558930,95560225	No	No	No	bcc_32413|Cycle_1|Type_1	30,29	95557702,95560225	psi1:0.5,psi2:0	C1_3,C2_0	C1_3,C2_1	Yes
ENSG00000130338	TULP4	chr6:158929507-158929574	+	deletion	6	No	-	protein_coding	no_known_ss	67	158929507	No	No	No	bcc_27536|Cycle_0|Type_1	30,31	158929537,158929544	psi1:0.625,psi2:1.0	C1_10,C2_5	C1_6,C2_0	-
ENSG00000180957	PITPNB	chr22:28249620-28254405	-	ES	86	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,86,31	28249651,28250842,28250927,28254375	No	No	No	bcc_38590|Cycle_0|Type_1	31,31	28249651,28254375	psi1:0.759259259259,psi2:1.0	C1_41,C2_44	C1_13,C2_0	Yes
ENSG00000183077	AFMID	chr17:76198801-76202057	+	ES_MULTI	336	No	Yes	protein_coding	all_splice_sites_known_(10_ss)	31,86,73,98,79,31	76198832,76200737,76200822,76200909,76200981,76201174,76201271,76201521,76201599,76202027	No	Yes	Yes	bcc_3143|Cycle_111|Type_1	31,31	76198832,76202027	psi1:0.272727272727,psi2:0.768292682927	C1_3,C2_63	C1_8,C2_19	Yes
ENSG00000152465	NMT2	chr10:15170429-15174846	-	ES	171	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,171,31	15170457,15172141,15172311,15174816	No	No	No	bcc_13055|Cycle_1|Type_1	28,31	15170457,15174816	psi1:0.978723404255,psi2:0.738095238095	C1_46,C2_31	C1_1,C2_11	Yes
ENSG00000196498	NCOR2	chr12:124820148-124821327	-	altD	114	No	-	protein_coding	2_ss_annotated_(over_3_ss):124820178,124821299	30,143	124820178,124821185	No	No	No	bcc_7505|Cycle_0|Type_1	30,29	124820178,124821299	psi1:0.789473684211,psi2:0.333333333333	C1_15,C2_1	C1_4,C2_2	Yes
ENSG00000175782	SLC35E3	chr12:69145941-69158514	+	ES	83	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,83,31	69145970,69152937,69153019,69158484	No	No	No	bcc_61976|Cycle_0|Type_1	29,31	69145970,69158484	psi1:1.0,psi2:0.818181818182	C1_19,C2_9	C1_0,C2_2	Yes
ENSG00000168958	MFF	chr2:228205065-228220423	+	ES_MULTI	219	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,159,60,31	228205096,228211942,228212100,228217230,228217289,228220393	No	Yes	No	bcc_45905|Cycle_0|Type_1	31,31	228205096,228220393	psi1:0.914728682171,psi2:0.625	C1_118,C2_65	C1_11,C2_39	Yes
ENSG00000125459	MSTO1	chr1:155583493-155583879	+	altD	33	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	64,30	155583557,155583850	No	No	No	bcc_54518|Cycle_0|Type_1	31,30	155583524,155583850	psi1:1.0,psi2:0.65	C1_7,C2_13	C1_0,C2_7	Yes
ENSG00000112679	DUSP22	chr6:311932-345884	+	ES	50	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,50,31	311962,335114,335163,345854	No	No	No	bcc_34455|Cycle_0|Type_1	30,31	311962,345854	psi1:0.9375,psi2:0.666666666667	C1_15,C2_8	C1_1,C2_4	Yes
ENSG00000100241	SBF1	chr22:50895072-50897714	-	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,78,31	50895102,50895463,50895540,50897684	No	No	No	bcc_69823|Cycle_0|Type_1	30,31	50895102,50897684	psi1:0.416666666667,psi2:0.8	C1_5,C2_4	C1_7,C2_1	Yes
ENSG00000156256	USP16	chr21:30408664-30409627	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	30408695,30409597	No	No	No	bcc_49454|Cycle_0|Type_1	31,28	30408695,30409600	psi1:0.583333333333,psi2:0.2	C1_7,C2_1	C1_5,C2_4	Yes
ENSG00000138030	KHK	chr2:27317448-27319627	+	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,135,31	27317479,27317668,27317802,27319597	No	Yes	No	bcc_28734|Cycle_0|Type_1	31,31	27317479,27319597	psi1:0,psi2:0.915032679739	C1_0,C2_140	C1_2,C2_13	Yes
ENSG00000099956	SMARCB1	chr22:24134023-24135775	+	altD	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	58,30	24134081,24135746	No	No	No	bcc_42239|Cycle_0|Type_1	31,30	24134054,24135746	psi1:0.777777777778,psi2:0.428571428571	C1_21,C2_6	C1_6,C2_8	Yes
ENSG00000245910	SNHG6	chr8:67834599-67837702	-	ES	112	Yes	-	processed_transcript	all_splice_sites_known_(4_ss)	28,112,31	67834627,67834849,67834960,67837672	No	Yes	No	bcc_43008|Cycle_6|Type_1	28,31	67834627,67837672	psi1:0.992537313433,psi2:0.817204301075	C1_399,C2_76	C1_3,C2_17	Yes
ENSG00000137409	MTCH1	chr6:36938439-36940509	-	altD	51	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,82	36938470,36940428	No	No	No	bcc_46221|Cycle_0|Type_1	31,31	36938470,36940479	psi1:0.767045454545,psi2:0.393442622951	C1_135,C2_24	C1_41,C2_37	Yes
ENSG00000071889	FAM3A	chrX:153735791-153736650	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,51,31	153735821,153736142,153736192,153736620	No	Yes	No	bcc_17502|Cycle_0|Type_1	30,31	153735821,153736620	psi1:0.722222222222,psi2:1.0	C1_13,C2_10	C1_5,C2_0	Yes
ENSG00000138443	ABI2	chr2:204255835-204260409	+	ES	144	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,147,28	204255866,204259423,204259569,204260382	No	Yes	No	bcc_7219|Cycle_4|Type_1	31,31	204255866,204260379	psi1:0.64,psi2:1.0	C1_16,C2_8	C1_9,C2_0	Yes
ENSG00000167110	GOLGA2	chr9:131030772-131036158	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,81,30	131030803,131035064,131035144,131036129	No	No	No	bcc_60813|Cycle_0|Type_1	31,30	131030803,131036129	psi1:0.933333333333,psi2:0.666666666667	C1_14,C2_6	C1_1,C2_3	Yes
ENSG00000023191	RNH1	chr11:502220-506639	-	ES	173	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	29,173,31	502249,504824,504996,506609	No	Yes	No	bcc_58209|Cycle_1|Type_1	29,31	502249,506609	psi1:1.0,psi2:0.818181818182	C1_17,C2_9	C1_0,C2_2	Yes
ENSG00000172175	MALT1	chr18:56400680-56401560	+	IR	90	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):56401539,56400806	126,22	-	No	No	No	bcc_59584|Cycle_0|Type_1	30,6,22	56400710,56400801,56400806,56401539	psi1:1.0,psi2:0.777777777778	C1_8,C2_7	C1_0,C2_2	Yes
ENSG00000138434	SSFA2	chr2:182784143-182786705	+	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,66,31	182784173,182785324,182785389,182786675	No	Yes	No	bcc_39372|Cycle_0|Type_1	30,31	182784173,182786675	psi1:0.625,psi2:0.909090909091	C1_15,C2_30	C1_9,C2_3	Yes
ENSG00000159140	SON	chr21:34941363-34945642	+	ES	80	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,80,29	34941393,34944857,34944936,34945614	No	No	No	bcc_42314|Cycle_0|Type_1	30,29	34941393,34945614	psi1:0.0416666666667,psi2:0.28	C1_2,C2_7	C1_46,C2_18	Yes
ENSG00000181513	ACBD4	chr17:43214790-43215154	+	altA	38	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,66	43214821,43215089	No	No	No	bcc_62089|Cycle_0|Type_1	31,28	43214821,43215127	psi1:0,psi2:0.705882352941	C1_0,C2_12	C1_1,C2_5	Yes
ENSG00000148341	SH3GLB2	chr9:131774546-131776720	-	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,12,31	131774577,131775287,131775298,131776690	No	Yes	No	bcc_20575|Cycle_0|Type_1	31,31	131774577,131776690	psi1:0.470588235294,psi2:0	C1_16,C2_0	C1_18,C2_6	Yes
ENSG00000182944	EWSR1	chr22:29695241-29695619	+	altD	51	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	80,31	29695321,29695589	No	No	No	bcc_31874|Cycle_0|Type_1	29,31	29695270,29695589	psi1:1.0,psi2:0.80487804878	C1_50,C2_33	C1_0,C2_8	Yes
ENSG00000127616	SMARCA4	chr19:11145777-11152010	+	altA	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,37	11145808,11151974	No	No	No	bcc_4657|Cycle_3|Type_1	31,28	11145808,11151983	psi1:0.363636363636,psi2:0.75	C1_8,C2_6	C1_14,C2_2	(GT:11145808,TG:11151974);(GT:11145808,AG:11151983)
ENSG00000064393	HIPK2	chr7:139299132-139305177	-	altA	81	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	107,31	139299239,139305147	No	No	No	bcc_47377|Cycle_0|Type_1	26,31	139299158,139305147	psi1:0.411764705882,psi2:0.75	C1_7,C2_12	C1_10,C2_4	Yes
ENSG00000088826	SMOX	chr20:4162942-4163159	-	IR	159	No	Yes	protein_coding	no_known_ss	217	-	No	No	No	bcc_52951|Cycle_0|Type_1	28,30	4162970,4163130	psi1:0.909090909091,psi2:0.5	C1_40,C2_2	C1_4,C2_2	(AG:4163130,GT:4162970)
ENSG00000187239	FNBP1	chr9:132662351-132662734	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):132662705,132662380	32,30	132662383,132662705	No	No	No	bcc_34069|Cycle_0|Type_1	29,30	132662380,132662705	psi1:0.0909090909091,psi2:0.5	C1_2,C2_1	C1_20,C2_1	Yes
ENSG00000198498	TMA16	chr4:164435279-164438615	+	ES	149	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,149,30	164435310,164436465,164436613,164438586	No	No	No	bcc_49549|Cycle_0|Type_1	31,30	164435310,164438586	psi1:1.0,psi2:0.76	C1_18,C2_19	C1_0,C2_6	Yes
ENSG00000161203	AP2M1	chr3:183898008-183898663	+	ES	6	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,6,27	183898039,183898433,183898438,183898637	No	No	No	bcc_55742|Cycle_0|Type_1	31,27	183898039,183898637	psi1:0.993710691824,psi2:0.816901408451	C1_158,C2_58	C1_1,C2_13	Yes
ENSG00000139131	YARS2	chr12:32900267-32903681	-	ES	171	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,171,29	32900297,32902871,32903041,32903653	No	No	No	bcc_51207|Cycle_0|Type_1	30,29	32900297,32903653	psi1:0.823529411765,psi2:1.0	C1_14,C2_27	C1_3,C2_0	Yes
ENSG00000151914	DST	chr6:56393692-56394801	-	ES	327	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,327,30	56393723,56394246,56394572,56394772	No	No	No	bcc_15302|Cycle_0|Type_1	31,30	56393723,56394772	psi1:0.61797752809,psi2:1.0	C1_55,C2_24	C1_34,C2_0	Yes
ENSG00000013561	RNF14	chr5:141353276-141362974	+	ES_MULTI	757	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,528,229,30	141353307,141357868,141358395,141359688,141359916,141362945	No	Yes	No	bcc_50866|Cycle_10|Type_1	31,30	141353307,141362945	psi1:0.829268292683,psi2:1.0	C1_68,C2_143	C1_14,C2_0	Yes
ENSG00000010626	LRRC23	chr12:7014892-7015603	+	ES	110	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,110,31	7014923,7015009,7015118,7015573	No	No	No	bcc_71718|Cycle_0|Type_1	31,31	7014923,7015573	psi1:0.454545454545,psi2:1.0	C1_15,C2_4	C1_18,C2_0	Yes
ENSG00000134644	PUM1	chr1:31418299-31423010	-	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,37	31418330,31422974	No	No	No	bcc_1271|Cycle_0|Type_1	31,31	31418330,31422980	psi1:0.653846153846,psi2:0.2	C1_17,C2_1	C1_9,C2_4	Yes
ENSG00000076053	RBM7	chr11:114273606-114276456	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,29	114273637,114276428	No	Yes	No	bcc_51949|Cycle_0|Type_1	31,26	114273637,114276431	psi1:0.692307692308,psi2:0.333333333333	C1_9,C2_2	C1_4,C2_4	Yes
ENSG00000048828	FAM120A	chr9:96261138-96277980	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):96261168,96277949	30,32	96261168,96277949	No	No	No	bcc_12679|Cycle_0|Type_1	30,29	96261168,96277952	psi1:0.866666666667,psi2:0.55	C1_13,C2_11	C1_2,C2_9	Yes
ENSG00000142186	SCYL1	chr11:65304191-65304536	+	altA	51	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,80	65304221,65304457	No	No	No	bcc_56516|Cycle_1|Type_1	30,29	65304221,65304508	psi1:0.5,psi2:0.818181818182	C1_11,C2_27	C1_11,C2_6	Yes
ENSG00000126581	BECN1	chr17:40975869-40976202	-	altD	22	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	28,52	40975897,40976151	No	No	No	bcc_38822|Cycle_0|Type_1	28,30	40975897,40976173	psi1:1.0,psi2:0.545454545455	C1_2,C2_6	C1_0,C2_5	Yes
ENSG00000165949	IFI27	chr14:94577112-94581224	+	ES	115	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,115,28	94577143,94578005,94578119,94581197	No	Yes	No	bcc_56639|Cycle_2|Type_1	31,28	94577143,94581197	psi1:0.842105263158,psi2:1.0	C1_16,C2_41	C1_3,C2_0	Yes
ENSG00000165949	IFI27	chr14:94577112-94581224	+	ES	149	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,149,28	94577143,94577971,94578119,94581197	No	Yes	No	bcc_56639|Cycle_1|Type_1	31,28	94577143,94581197	psi1:0.842105263158,psi2:1.0	C1_16,C2_41	C1_3,C2_0	Yes
ENSG00000197283	SYNGAP1	chr6:33412364-33414387	+	altA	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,36	33412394,33414352	No	No	No	bcc_65045|Cycle_1|Type_1	30,30	33412394,33414358	psi1:0.738095238095,psi2:0	C1_31,C2_0	C1_11,C2_2	Yes
ENSG00000147364	FBXO25	chr8:381413-385643	+	ES	50	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,50,29	381444,382886,382935,385615	No	Yes	No	bcc_45542|Cycle_21|Type_1	31,29	381444,385615	psi1:0.983870967742,psi2:0.787878787879	C1_61,C2_26	C1_1,C2_7	Yes
ENSG00000145349	CAMK2D	chr4:114375640-114378521	-	altD	44	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,75	114375671,114378447	No	Yes	No	bcc_10668|Cycle_0|Type_1	31,31	114375671,114378491	psi1:0.228571428571,psi2:0.625	C1_8,C2_5	C1_27,C2_3	Yes
ENSG00000129103	SUMF2	chr7:56141880-56144556	+	ES	151	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,151,30	56141911,56142279,56142429,56144527	No	Yes	No	bcc_15514|Cycle_0|Type_1	31,30	56141911,56144527	psi1:0.857142857143,psi2:1.0	C1_24,C2_89	C1_4,C2_0	Yes
ENSG00000213593	TMX2	chr11:57505111-57505856	+	ES	191	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,191,31	57505140,57505308,57505498,57505826	No	Yes	No	bcc_51983|Cycle_2|Type_1	29,31	57505140,57505826	psi1:1.0,psi2:0.809523809524	C1_98,C2_68	C1_0,C2_16	Yes
ENSG00000185324	CDK10	chr16:89753136-89755690	+	altD	38	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	69,31	89753205,89755660	No	No	No	bcc_65969|Cycle_0|Type_1	31,31	89753167,89755660	psi1:1.0,psi2:0.578947368421	C1_4,C2_11	C1_0,C2_8	Yes
ENSG00000142192	APP	chr21:27354759-27394186	-	ES	168	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,168,31	27354790,27372330,27372497,27394156	No	Yes	Yes	bcc_38343|Cycle_138|Type_1	31,31	27354790,27394156	psi1:0.645217391304,psi2:0.994444444444	C1_371,C2_179	C1_204,C2_1	Yes
ENSG00000116521	SCAMP3	chr1:155230421-155231907	-	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,78,31	155230450,155231448,155231525,155231877	No	No	No	bcc_53961|Cycle_0|Type_1	29,31	155230450,155231877	psi1:0.789473684211,psi2:1.0	C1_15,C2_17	C1_4,C2_0	Yes
ENSG00000196678	ERI2	chr16:20807784-20808236	+	IR	396	No	Yes	protein_coding	no_known_ss	452	-	No	Yes	Yes	bcc_43004|Cycle_2|Type_1	27,29	20807811,20808208	psi1:1.0,psi2:0.455882352941	C1_16,C2_62	C1_0,C2_74	Yes
ENSG00000138443	ABI2	chr2:204259541-204260409	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,31	204259569,204260379	No	Yes	No	bcc_7219|Cycle_0|Type_1	28,28	204259569,204260382	psi1:0.444444444444,psi2:1.0	C1_4,C2_1	C1_5,C2_0	Yes
ENSG00000135636	DYSF	chr2:71840509-71871125	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,31	71840540,71847677,71847739,71871095	No	No	No	bcc_58899|Cycle_0|Type_1	31,31	71840540,71871095	psi1:0.2,psi2:0.533333333333	C1_2,C2_8	C1_8,C2_7	Yes
ENSG00000126214	KLC1	chr14:104145825-104167022	+	altD	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	57,31	104145882,104166992	No	Yes	No	bcc_42941|Cycle_4|Type_1	30,31	104145855,104166992	psi1:0.666666666667,psi2:1.0	C1_10,C2_5	C1_5,C2_0	Yes
ENSG00000117266	CDK18	chr1:205492723-205493390	+	altD	90	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	120,31	205492843,205493360	No	No	No	bcc_31427|Cycle_0|Type_1	30,31	205492753,205493360	psi1:0.666666666667,psi2:0	C1_10,C2_0	C1_5,C2_1	Yes
ENSG00000137872	SEMA6D	chr15:48064512-48064573	-	deletion	3	No	-	protein_coding	no_known_ss	61	48064512	No	No	No	bcc_26828|Cycle_0|Type_1	27,31	48064539,48064543	psi1:0.444444444444,psi2:1.0	C1_4,C2_1	C1_5,C2_0	-
ENSG00000077809	GTF2I	chr7:74125409-74129208	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):74125440,74129177	31,32	74125440,74129177	No	Yes	No	bcc_19353|Cycle_1|Type_1	31,29	74125440,74129180	psi1:0.444444444444,psi2:1.0	C1_4,C2_1	C1_5,C2_0	Yes
ENSG00000112473	SLC39A7	chr6:33168684-33169048	+	IR	303	No	-	protein_coding	no_known_ss	364	-	No	Yes	No	bcc_40726|Cycle_1|Type_1	31,30	33168715,33169019	psi1:0.777777777778,psi2:0.977272727273	C1_14,C2_43	C1_4,C2_1	Yes
ENSG00000116128	BCL9	chr1:147097092-147097155	-	deletion	3	No	-	protein_coding	no_known_ss	63	147097092	No	No	No	bcc_39643|Cycle_0|Type_1	29,31	147097121,147097125	psi1:0.515151515152,psi2:1.0	C1_17,C2_5	C1_16,C2_0	-
ENSG00000175866	BAIAP2	chr17:79082278-79089600	+	ES	46	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,46,31	79082309,79084714,79084759,79089570	No	No	No	bcc_46412|Cycle_0|Type_1	31,31	79082309,79089570	psi1:0,psi2:0.769230769231	C1_0,C2_20	C1_1,C2_6	Yes
ENSG00000162298	SYVN1	chr11:64897617-64897752	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,30	64897647,64897723	No	No	No	bcc_15032|Cycle_0|Type_1	27,30	64897644,64897723	psi1:1.0,psi2:0.642857142857	C1_4,C2_9	C1_0,C2_5	Yes
ENSG00000179889	PDXDC1	chr16:15092231-15098071	+	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,81,28	15092262,15095633,15095713,15098044	No	No	No	bcc_17688|Cycle_1|Type_1	31,28	15092262,15098044	psi1:1.0,psi2:0.793103448276	C1_26,C2_23	C1_0,C2_6	Yes
ENSG00000225733	FGD5-AS1	chr3:14987630-14988651	-	altD	27	No	-	antisense	2_ss_annotated_(over_3_ss):14988594,14987661	31,58	14987661,14988594	No	No	No	bcc_21891|Cycle_0|Type_1	31,31	14987661,14988621	psi1:0.928571428571,psi2:0.666666666667	C1_13,C2_8	C1_1,C2_4	Yes
ENSG00000173744	AGFG1	chr2:228389600-228398292	+	ES	120	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,120,28	228389631,228395807,228395926,228398265	No	No	No	bcc_40315|Cycle_0|Type_1	31,28	228389631,228398265	psi1:0.814814814815,psi2:1.0	C1_22,C2_32	C1_5,C2_0	Yes
ENSG00000151914	DST	chr6:56328532-56330906	-	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,72,31	56328562,56329483,56329554,56330876	No	No	No	bcc_15295|Cycle_0|Type_1	30,31	56328562,56330876	psi1:0.730158730159,psi2:0	C1_92,C2_0	C1_34,C2_6	Yes
ENSG00000170017	ALCAM	chr3:105269072-105271342	+	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,39,31	105269103,105270988,105271026,105271312	No	No	No	bcc_1608|Cycle_0|Type_1	31,31	105269103,105271312	psi1:0.638888888889,psi2:1.0	C1_46,C2_20	C1_26,C2_0	Yes
ENSG00000150593	PDCD4	chr10:112631745-112641020	+	ES	105	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,105,30	112631776,112635724,112635828,112640991	No	Yes	Yes	bcc_17497|Cycle_5|Type_1	31,30	112631776,112640991	psi1:0.75,psi2:1.0	C1_9,C2_7	C1_3,C2_0	Yes
ENSG00000004700	RECQL	chr12:21652519-21654377	-	ES	46	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,46,31	21652549,21654104,21654149,21654347	No	No	No	bcc_76804|Cycle_0|Type_1	30,31	21652549,21654347	psi1:0.7,psi2:1.0	C1_7,C2_4	C1_3,C2_0	Yes
ENSG00000198752	CDC42BPB	chr14:103420995-103425998	-	ES	51	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):103425968,103421025	30,51,31	103421025,103422577,103422627,103425968	No	No	No	bcc_42052|Cycle_0|Type_1	30,31	103421025,103425968	psi1:0.363636363636,psi2:0	C1_12,C2_0	C1_21,C2_9	Yes
ENSG00000067141	NEO1	chr15:73566316-73570499	+	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,33,28	73566346,73567033,73567065,73570472	No	No	No	bcc_1197|Cycle_0|Type_1	30,28	73566346,73570472	psi1:0.363636363636,psi2:0	C1_4,C2_0	C1_7,C2_3	Yes
ENSG00000184831	APOO	chrX:23851600-23858460	-	altA	102	No	-	protein_coding	all_splice_sites_known_(3_ss)	129,31	23851729,23858430	No	No	No	bcc_51796|Cycle_0|Type_1	27,31	23851627,23858430	psi1:0.493827160494,psi2:0.862068965517	C1_40,C2_25	C1_41,C2_4	Yes
ENSG00000182944	EWSR1	chr22:29694854-29695254	+	altA	39	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,70	29694885,29695185	No	No	No	bcc_31873|Cycle_0|Type_1	31,31	29694885,29695224	psi1:0,psi2:0.275	C1_0,C2_11	C1_19,C2_29	Yes
ENSG00000169490	TM2D2	chr8:38852893-38853968	-	altD	206	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,237	38852924,38853732	No	Yes	No	bcc_54143|Cycle_3|Type_1	31,31	38852924,38853938	psi1:0.8,psi2:1.0	C1_16,C2_19	C1_4,C2_0	Yes
ENSG00000057935	MTA3	chr2:42924945-42931367	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,34	42924974,42931334	No	No	No	bcc_42180|Cycle_0|Type_1	29,31	42924974,42931337	psi1:0.394736842105,psi2:0.8	C1_15,C2_8	C1_23,C2_2	Yes
ENSG00000168904	LRRC28	chr15:99796299-99827492	+	ES	41	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,41,31	99796330,99816781,99816821,99827462	No	No	No	bcc_61192|Cycle_0|Type_1	31,31	99796330,99827462	psi1:1.0,psi2:0.631578947368	C1_5,C2_12	C1_0,C2_7	Yes
ENSG00000160752	FDPS	chr1:155278726-155279882	+	altA	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,49	155278756,155279834	No	No	No	bcc_59247|Cycle_0|Type_1	30,28	155278756,155279855	psi1:0.588235294118,psi2:0.259259259259	C1_10,C2_7	C1_7,C2_20	Yes
ENSG00000213995	CARKD	chr13:111277594-111286922	+	ES	109	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,109,31	111277625,111279786,111279894,111286892	No	No	No	bcc_54007|Cycle_0|Type_1	31,31	111277625,111286892	psi1:1.0,psi2:0.846153846154	C1_26,C2_11	C1_0,C2_2	Yes
ENSG00000072849	DERL2	chr17:5383871-5386159	-	ES	94	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,94,31	5383902,5384616,5384709,5386129	No	No	No	bcc_47270|Cycle_0|Type_1	31,31	5383902,5386129	psi1:0.857142857143,psi2:1.0	C1_18,C2_56	C1_3,C2_0	Yes
ENSG00000257103	LSM14A	chr19:34712615-34718299	+	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,57,30	34712643,34717313,34717369,34718270	No	No	No	bcc_27709|Cycle_1|Type_1	28,30	34712643,34718270	psi1:0.670886075949,psi2:0.325	C1_53,C2_13	C1_26,C2_27	Yes
ENSG00000188343	FAM92A1	chr8:94713657-94715876	+	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,24,29	94713686,94714748,94714771,94715848	No	No	No	bcc_39811|Cycle_0|Type_1	29,29	94713686,94715848	psi1:0.37037037037,psi2:0	C1_10,C2_0	C1_17,C2_7	Yes
ENSG00000169490	TM2D2	chr8:38852893-38853761	-	altA	389	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	420,30	38853313,38853732	No	Yes	No	bcc_54143|Cycle_0|Type_1	31,30	38852924,38853732	psi1:0.843137254902,psi2:0.526315789474	C1_43,C2_10	C1_8,C2_9	Yes
ENSG00000112514	CUTA	chr6:33385441-33385675	-	IR	173	Yes	-	protein_coding	no_known_ss	234	-	No	No	No	bcc_56519|Cycle_0|Type_1	31,30	33385472,33385646	psi1:0.965517241379,psi2:0.75	C1_28,C2_12	C1_1,C2_4	Yes
ENSG00000135838	NPL	chr1:182794924-182798766	+	altA	879	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,908	182794955,182797859	No	No	No	bcc_50258|Cycle_0|Type_1	31,29	182794955,182798738	psi1:0.772727272727,psi2:0.974358974359	C1_17,C2_76	C1_5,C2_2	Yes
ENSG00000172663	TMEM134	chr11:67235006-67235529	-	altA	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	55,31	67235061,67235499	No	No	No	bcc_68894|Cycle_0|Type_1	28,31	67235034,67235499	psi1:1.0,psi2:0.625	C1_2,C2_5	C1_0,C2_3	Yes
ENSG00000141551	CSNK1D	chr17:80202677-80206780	-	ES	64	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,64,30	80202707,80203852,80203915,80206751	No	No	No	bcc_41271|Cycle_0|Type_1	30,30	80202707,80206751	psi1:0.72,psi2:0.96	C1_18,C2_24	C1_7,C2_1	Yes
ENSG00000180448	HMHA1	chr19:1085509-1085618	+	IR	51	No	-	protein_coding	no_known_ss	109	-	No	Yes	No	bcc_28776|Cycle_3|Type_1	27,31	1085536,1085588	psi1:0.714285714286,psi2:1.0	C1_5,C2_3	C1_2,C2_0	(CC:1085536,TG:1085588)
ENSG00000219626	FAM228B	chr2:24299809-24303776	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,31	24299839,24303746	No	No	No	bcc_2782|Cycle_0|Type_1	30,28	24299839,24303749	psi1:0.625,psi2:1.0	C1_5,C2_2	C1_3,C2_0	Yes
ENSG00000182446	NPLOC4	chr17:79575817-79580374	-	ES	49	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,49,31	79575848,79577236,79577284,79580344	No	No	No	bcc_20735|Cycle_0|Type_1	31,31	79575848,79580344	psi1:0.857142857143,psi2:1.0	C1_6,C2_18	C1_1,C2_0	Yes
ENSG00000198712	MT-CO2	chrMT:7659-7719	-	deletion	3	No	Yes	protein_coding	no_known_ss	60	7659	No	No	No	bcc_13607|Cycle_0|Type_1	27,30	7686,7690	psi1:1.0,psi2:0.714285714286	C1_3,C2_5	C1_0,C2_2	-
ENSG00000077549	CAPZB	chr1:19666082-19670882	-	ES	113	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,113,31	19666111,19669246,19669358,19670852	No	No	No	bcc_40986|Cycle_0|Type_1	29,31	19666111,19670852	psi1:0.281512605042,psi2:0	C1_67,C2_0	C1_171,C2_105	Yes
ENSG00000186594	MIR22HG	chr17:1617279-1619453	-	ES	83	Yes	-	lincRNA	all_splice_sites_known_(4_ss)	29,83,30	1617308,1617665,1617747,1619424	No	No	No	bcc_69960|Cycle_0|Type_1	29,30	1617308,1619424	psi1:0.5,psi2:0.888888888889	C1_1,C2_16	C1_1,C2_2	Yes
ENSG00000099250	NRP1	chr10:33475388-33481239	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):33475416,33481209	31,31	33475419,33481209	No	No	No	bcc_47959|Cycle_0|Type_1	28,31	33475416,33481209	psi1:0.5,psi2:0.111111111111	C1_1,C2_2	C1_1,C2_16	Yes
ENSG00000122705	CLTA	chr9:36204145-36211630	+	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,36,31	36204176,36210622,36210657,36211600	No	Yes	No	bcc_54892|Cycle_0|Type_1	31,31	36204176,36211600	psi1:0.220588235294,psi2:0	C1_30,C2_0	C1_106,C2_99	Yes
ENSG00000138326	RPS24	chr10:79797031-79800378	+	ES	3	No	Yes	protein_coding	5_ss_annotated_(over_7_ss):79797062,79799983,79800373,79799962,79797723	31,7,18,6	79797062,79797723,79797729,79799966,79799983,79800373	No	Yes	No	bcc_24161|Cycle_11|Type_1	31,22,6	79797062,79799962,79799983,79800373	psi1:0.0699088145897,psi2:0.324909747292	C1_46,C2_180	C1_612,C2_374	Yes
ENSG00000167220,ENSG00000267228	HDHD2,IER3IP1	chr18:44661044-44662739	-	altD	37	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	31,67	44661075,44662673	No	No	No	bcc_48351|Cycle_0|Type_1	31,30	44661075,44662710	psi1:0.3,psi2:0.636363636364	C1_6,C2_7	C1_14,C2_4	(GC:44662710,CT:44661075);(AC:44662673,CT:44661075)
ENSG00000168259	DNAJC7	chr17:40141572-40142341	-	IR	3	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):40142282,40141575	3,60	-	No	No	No	bcc_9387|Cycle_0|Type_1	3,26,31	40141575,40142282,40142307,40142311	psi1:1.0,psi2:0.846153846154	C1_49,C2_22	C1_0,C2_4	(CG:40142311,AC:40142307);(AC:40142282,CT:40141575)
ENSG00000091527	CDV3	chr3:133305536-133306770	+	altA	734	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,765	133305566,133306006	No	Yes	No	bcc_33121|Cycle_50|Type_1	30,31	133305566,133306740	psi1:0.741007194245,psi2:0.963157894737	C1_103,C2_183	C1_36,C2_7	Yes
ENSG00000153827	TRIP12	chr2:230670489-230672454	-	altA	81	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	110,31	230670599,230672424	No	Yes	No	bcc_16468|Cycle_1|Type_1	29,31	230670518,230672424	psi1:0.782608695652,psi2:1.0	C1_18,C2_17	C1_5,C2_0	Yes
ENSG00000034053	APBA2	chr15:29385393-29390722	+	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,36,30	29385423,29386481,29386516,29390693	No	No	No	bcc_49843|Cycle_0|Type_1	30,30	29385423,29390693	psi1:0.844444444444,psi2:0	C1_38,C2_0	C1_7,C2_1	Yes
ENSG00000183077	AFMID	chr17:76187110-76203020	+	ES_MULTI	418	Yes	Yes	protein_coding	all_splice_sites_known_(12_ss)	31,105,49,86,73,105,29	76187141,76198580,76198684,76198784,76198832,76200737,76200822,76200909,76200981,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_37|Type_1	31,29	76187141,76202992	psi1:0.75,psi2:0.983425414365	C1_18,C2_356	C1_6,C2_6	Yes
ENSG00000103174	NAGPA	chr16:5078979-5081776	-	ES	109	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,109,31	5079009,5080386,5080494,5081746	No	No	No	bcc_75293|Cycle_0|Type_1	30,31	5079009,5081746	psi1:0.727272727273,psi2:1.0	C1_8,C2_5	C1_3,C2_0	Yes
ENSG00000116001	TIA1	chr2:70441595-70442533	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	70441626,70442503	No	No	No	bcc_36221|Cycle_0|Type_1	28,31	70441623,70442503	psi1:0.727272727273,psi2:1.0	C1_8,C2_5	C1_3,C2_0	Yes
ENSG00000107959	PITRM1	chr10:3189901-3191843	-	ES_MULTI	198	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	28,77,121,31	3189929,3190179,3190255,3190363,3190483,3191813	No	No	No	bcc_54860|Cycle_0|Type_1	28,31	3189929,3191813	psi1:0.833333333333,psi2:1.0	C1_25,C2_42	C1_5,C2_0	Yes
ENSG00000145216	FIP1L1	chr4:54257275-54265932	+	ES_altA	75	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):54257665,54257306,54257597,54265897	31,69,36	54257306,54257597,54257665,54265897	No	Yes	No	bcc_13982|Cycle_4|Type_1	31,30	54257306,54265903	psi1:0.923076923077,psi2:0.6	C1_36,C2_3	C1_3,C2_2	Yes
ENSG00000153914	SREK1	chr5:65465970-65470803	+	ES	363	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,363,30	65465998,65466413,65466775,65470774	No	No	No	bcc_49243|Cycle_0|Type_1	28,30	65465998,65470774	psi1:1.0,psi2:0.869565217391	C1_79,C2_20	C1_0,C2_3	Yes
ENSG00000151948	GLT1D1	chr12:129399503-129411679	+	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,96,30	129399534,129410904,129410999,129411650	No	No	No	bcc_53925|Cycle_0|Type_1	31,30	129399534,129411650	psi1:1.0,psi2:0.846153846154	C1_23,C2_11	C1_0,C2_2	Yes
ENSG00000142192	APP	chr21:27354759-27372359	-	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,57,30	27354790,27369675,27369731,27372330	No	Yes	No	bcc_38343|Cycle_235|Type_1	31,30	27354790,27372330	psi1:0.239583333333,psi2:0.554285714286	C1_46,C2_97	C1_146,C2_78	Yes
ENSG00000075711	DLG1	chr3:196802710-196807952	-	ES	100	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,100,31	196802741,196803457,196803556,196807922	No	Yes	No	bcc_42915|Cycle_5|Type_1	31,31	196802741,196807922	psi1:0.356164383562,psi2:1.0	C1_26,C2_5	C1_47,C2_0	Yes
ENSG00000075151	EIF4G3	chr1:21276573-21295996	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,30	21276604,21295967	No	No	No	bcc_32652|Cycle_0|Type_1	28,30	21276601,21295967	psi1:0.538461538462,psi2:1.0	C1_7,C2_2	C1_6,C2_0	Yes
ENSG00000164938	TP53INP1	chr8:95942925-95952118	-	ES	38	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,38,31	95942956,95944298,95944335,95952088	No	No	No	bcc_31238|Cycle_0|Type_1	31,31	95942956,95952088	psi1:0,psi2:0.615384615385	C1_0,C2_8	C1_1,C2_5	Yes
ENSG00000127603	MACF1	chr1:39901402-39903477	+	ES	9	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,9,29	39901433,39902154,39902162,39903449	No	No	No	bcc_16563|Cycle_1|Type_1	31,29	39901433,39903449	psi1:0.384615384615,psi2:1.0	C1_15,C2_3	C1_24,C2_0	Yes
ENSG00000073712	FERMT2	chr14:53348158-53360040	-	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,33,30	53348187,53348514,53348546,53360011	No	No	No	bcc_34954|Cycle_0|Type_1	29,30	53348187,53360011	psi1:0.290322580645,psi2:0	C1_9,C2_0	C1_22,C2_12	Yes
ENSG00000196465,ENSG00000092841	MYL6B,MYL6	chr12:56552466-56553400	+	ES	19	Yes	Yes	protein_coding,protein_coding	3_ss_annotated_(over_4_ss):56553371,56552686,56552495	29,19,30	56552495,56552686,56552704,56553371	No	No	No	bcc_59364|Cycle_0|Type_1	29,30	56552495,56553371	psi1:0.153374233129,psi2:0.00284090909091	C1_25,C2_1	C1_138,C2_351	Yes
ENSG00000107897	ACBD5	chr10:27508758-27512297	-	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,33,31	27508786,27512136,27512168,27512267	No	No	No	bcc_26150|Cycle_0|Type_1	28,31	27508786,27512267	psi1:0.166666666667,psi2:0.5	C1_5,C2_4	C1_25,C2_4	Yes
ENSG00000171206	TRIM8	chr10:104404913-104414866	+	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,96,30	104404944,104414410,104414505,104414837	No	No	No	bcc_35281|Cycle_0|Type_1	31,30	104404944,104414837	psi1:0.785714285714,psi2:1.0	C1_33,C2_30	C1_9,C2_0	(GT:104414505,AG:104414837);(GC:104404944,AG:104414837);(GC:104404944,AG:104414410)
ENSG00000003756	RBM5	chr3:50147090-50148144	+	ES_altA	88	Yes	Yes	protein_coding	4_ss_annotated_(over_5_ss):50147896,50147121,50147812,50148112	31,85,33	50147121,50147812,50147896,50148112	No	No	No	bcc_33793|Cycle_0|Type_1	31,30	50147121,50148115	psi1:0.857142857143,psi2:1.0	C1_12,C2_30	C1_2,C2_0	Yes
ENSG00000103266	STUB1	chr16:732250-732388	+	IR	82	Yes	Yes	protein_coding	no_known_ss	138	-	No	No	No	bcc_45272|Cycle_1|Type_1	31,25	732281,732364	psi1:0.15873015873,psi2:0.451612903226	C1_10,C2_28	C1_53,C2_34	Yes
ENSG00000204172	AGAP10	chr10:47197542-47207842	-	ES	101	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,101,31	47197573,47200161,47200261,47207812	Yes	Yes	No	bcc_3918|Cycle_1|Type_1	31,31	47197573,47207812	psi1:0.952380952381,psi2:0.722222222222	C1_20,C2_13	C1_1,C2_5	Yes
ENSG00000198035	AGAP9	chr10:48221508-48231809	+	ES	101	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,101,31	48221539,48229091,48229191,48231779	Yes	Yes	No	bcc_3918|Cycle_1|Type_1	31,31	48221539,48231779	psi1:0.952380952381,psi2:0.722222222222	C1_20,C2_13	C1_1,C2_5	Yes
ENSG00000115649	CNPPD1	chr2:220038160-220039530	-	ES	62	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,62,31	220038189,220038868,220038929,220039500	No	No	No	bcc_73137|Cycle_0|Type_1	29,31	220038189,220039500	psi1:0.95,psi2:0.727272727273	C1_19,C2_8	C1_1,C2_3	Yes
ENSG00000051108	HERPUD1	chr16:56969193-56969344	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	56969224,56969313	No	No	No	bcc_48878|Cycle_2|Type_1	31,29	56969224,56969316	psi1:0.769230769231,psi2:0.96875	C1_10,C2_31	C1_3,C2_1	Yes
ENSG00000239779	WBP1	chr2:74685768-74686800	+	ES	85	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,85,31	74685798,74686605,74686689,74686770	Yes	Yes	No	bcc_63203|Cycle_1|Type_1	30,31	74685798,74686770	psi1:0.675675675676,psi2:0.2	C1_25,C2_1	C1_12,C2_4	Yes
ENSG00000159189	C1QC	chr1:22970176-22973747	+	ES	194	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,194,28	22970207,22970504,22970697,22973720	No	No	No	bcc_56294|Cycle_1|Type_1	31,28	22970207,22973720	psi1:0.845070422535,psi2:1.0	C1_60,C2_111	C1_11,C2_0	Yes
ENSG00000139910	NOVA1	chr14:26949318-27064644	-	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,102,29	26949349,27018886,27018987,27064616	No	No	No	bcc_8979|Cycle_0|Type_1	31,29	26949349,27064616	psi1:0.3,psi2:1.0	C1_18,C2_3	C1_42,C2_0	Yes
ENSG00000089351	GRAMD1A	chr19:35505260-35506760	+	altAD	3	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):35506728,35505291	31,33	35505291,35506728	No	No	No	bcc_76558|Cycle_0|Type_1	30,31	35505290,35506730	psi1:0.6,psi2:1.0	C1_6,C2_2	C1_4,C2_0	(GT:35505291,AG:35506728);(GG:35505290,CG:35506730)
ENSG00000054654	SYNE2	chr14:64691234-64691745	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	64691265,64691714	No	No	No	bcc_57467|Cycle_0|Type_1	31,29	64691265,64691717	psi1:0,psi2:0.5	C1_0,C2_4	C1_1,C2_4	Yes
ENSG00000163913	IFT122	chr3:129225361-129226539	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	129225392,129226508	No	No	No	bcc_46596|Cycle_0|Type_1	31,29	129225392,129226511	psi1:0.5,psi2:1.0	C1_4,C2_1	C1_4,C2_0	Yes
ENSG00000213079	SCAF8	chr6:155123250-155124708	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):155123281,155124678	31,31	155123281,155124678	No	No	No	bcc_39261|Cycle_0|Type_1	31,28	155123281,155124681	psi1:1.0,psi2:0.6	C1_1,C2_3	C1_0,C2_2	Yes
ENSG00000103550	KNOP1	chr16:19721879-19725469	-	ES	69	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,69,30	19721908,19722694,19722762,19725440	No	No	No	bcc_38250|Cycle_0|Type_1	29,30	19721908,19725440	psi1:0.8,psi2:1.0	C1_12,C2_12	C1_3,C2_0	Yes
ENSG00000135457	TFCP2	chr12:51489029-51489802	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	51489061,51489772	No	No	No	bcc_19909|Cycle_0|Type_1	29,31	51489058,51489772	psi1:0.733333333333,psi2:0.333333333333	C1_11,C2_1	C1_4,C2_2	Yes
ENSG00000105429	MEGF8	chr19:42880947-42881035	+	deletion	30	No	-	protein_coding	no_known_ss	88	42880947	No	No	No	bcc_13818|Cycle_0|Type_1	27,31	42880974,42881005	psi1:0.75,psi2:1.0	C1_6,C2_4	C1_2,C2_0	-
ENSG00000105223	PLD3	chr19:40854644-40872355	+	ES	269	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,269,30	40854675,40871569,40871837,40872326	No	Yes	No	bcc_13852|Cycle_3|Type_1	31,30	40854675,40872326	psi1:0.736842105263,psi2:1.0	C1_28,C2_17	C1_10,C2_0	Yes
ENSG00000134769	DTNA	chr18:32407609-32428289	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,30	32407640,32409364,32409453,32428260	No	No	No	bcc_28580|Cycle_0|Type_1	31,30	32407640,32428260	psi1:0.254901960784,psi2:1.0	C1_13,C2_2	C1_38,C2_0	Yes
ENSG00000182518	FAM104B	chrX:55172713-55185592	-	altD	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	55172744,55185559	No	No	No	bcc_22164|Cycle_1|Type_1	31,31	55172744,55185562	psi1:0.0833333333333,psi2:0.333333333333	C1_1,C2_3	C1_11,C2_6	(GC:55185559,CT:55172744);(AC:55185562,CT:55172744)
ENSG00000100209	HSCB	chr22:29140661-29147259	+	ES_altD	150	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	36,145,31	29140697,29141852,29141996,29147229	No	Yes	No	bcc_9057|Cycle_11|Type_1	31,31	29140692,29147229	psi1:0.846153846154,psi2:1.0	C1_11,C2_20	C1_2,C2_0	Yes
ENSG00000187667	WHAMMP3	chr15:23194869-23198539	-	ES	130	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	30,130,30	23194899,23196162,23196291,23198510	No	No	No	bcc_46173|Cycle_6|Type_1	30,30	23194899,23198510	psi1:0.5,psi2:0.8	C1_5,C2_8	C1_5,C2_2	Yes
ENSG00000076513	ANKRD13A	chr12:110465541-110466346	+	IR	745	Yes	Yes	protein_coding	no_known_ss	805	-	No	No	No	bcc_35417|Cycle_1|Type_1	30,30	110465571,110466317	psi1:0.927272727273,psi2:0.666666666667	C1_102,C2_18	C1_8,C2_9	Yes
ENSG00000204054	LINC00963	chr9:132251548-132255785	+	altA	62	Yes	-	processed_transcript	all_splice_sites_known_(3_ss)	30,91	132251578,132255695	No	Yes	No	bcc_18110|Cycle_4|Type_1	30,29	132251578,132255757	psi1:0.6,psi2:0.888888888889	C1_3,C2_16	C1_2,C2_2	Yes
ENSG00000183077	AFMID	chr17:76187110-76203020	+	ES_MULTI	332	Yes	Yes	protein_coding	all_splice_sites_known_(10_ss)	31,105,49,73,105,29	76187141,76198580,76198684,76198784,76198832,76200909,76200981,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_41|Type_1	31,29	76187141,76202992	psi1:0.76,psi2:0.981651376147	C1_19,C2_321	C1_6,C2_6	Yes
ENSG00000065978	YBX1	chr1:43159163-43162341	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,29	43159194,43161870,43161959,43162313	No	No	No	bcc_42517|Cycle_0|Type_1	31,29	43159194,43162313	psi1:0.817427385892,psi2:0.986301369863	C1_197,C2_504	C1_44,C2_7	Yes
ENSG00000132589	FLOT2	chr17:27210220-27215992	-	ES	91	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,91,30	27210249,27211243,27211333,27215963	No	Yes	No	bcc_53983|Cycle_1|Type_1	29,30	27210249,27215963	psi1:0.833333333333,psi2:1.0	C1_30,C2_43	C1_6,C2_0	Yes
ENSG00000122376	FAM35A	chr10:88930701-88939860	+	ES	207	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,207,29	88930731,88935646,88935852,88939832	No	Yes	No	bcc_46816|Cycle_1|Type_1	30,29	88930731,88939832	psi1:0.714285714286,psi2:0.958333333333	C1_10,C2_92	C1_4,C2_4	Yes
ENSG00000119139	TJP2	chr9:71863110-71867760	+	ES_MULTI	441	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,111,330,30	71863140,71864291,71864401,71865951,71866280,71867731	No	Yes	No	bcc_43562|Cycle_2|Type_1	30,30	71863140,71867731	psi1:0.795454545455,psi2:0.986486486486	C1_105,C2_146	C1_27,C2_2	Yes
ENSG00000126883	NUP214	chr9:134108931-134108994	+	deletion	3	No	Yes	protein_coding	no_known_ss	63	134108931	No	No	No	bcc_51528|Cycle_0|Type_1	29,31	134108960,134108964	psi1:1.0,psi2:0.789473684211	C1_13,C2_15	C1_0,C2_4	-
ENSG00000188739,ENSG00000054267	RBM34,ARID4B	chr1:235318396-235324238	-	ES	137	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,137,31	235318427,235323826,235323962,235324208	No	Yes	No	bcc_43262|Cycle_0|Type_1	31,31	235318427,235324208	psi1:0.769230769231,psi2:1.0	C1_30,C2_22	C1_9,C2_0	Yes
ENSG00000101079	NDRG3	chr20:35317158-35350112	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,36,31	35317187,35335375,35335410,35350082	No	No	No	bcc_5603|Cycle_0|Type_1	29,31	35317187,35350082	psi1:0.957446808511,psi2:0.714285714286	C1_45,C2_5	C1_2,C2_2	Yes
ENSG00000164062	APEH	chr3:49712024-49713157	+	ES	127	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,127,31	49712054,49712616,49712742,49713127	No	Yes	Yes	bcc_55379|Cycle_0|Type_1	30,31	49712054,49713127	psi1:0.714285714286,psi2:0.941176470588	C1_5,C2_16	C1_2,C2_1	Yes
ENSG00000123384	LRP1	chr12:57587437-57587718	+	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):57587682,57587468	31,37	57587468,57587682	No	No	No	bcc_48763|Cycle_0|Type_1	31,31	57587468,57587688	psi1:1.0,psi2:0.833333333333	C1_14,C2_10	C1_0,C2_2	Yes
ENSG00000196428	TSC22D2	chr3:150129064-150174891	+	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,72,29	150129095,150140836,150140907,150174863	No	No	No	bcc_18490|Cycle_0|Type_1	31,29	150129095,150174863	psi1:0.583333333333,psi2:0	C1_7,C2_0	C1_5,C2_1	Yes
ENSG00000215908	CROCCP2	chr1:16944789-16944850	-	deletion	3	No	-	lincRNA	no_known_ss	61	16944789	No	No	No	bcc_56252|Cycle_2|Type_1	27,31	16944816,16944820	psi1:1.0,psi2:0.761904761905	C1_22,C2_32	C1_0,C2_10	-
ENSG00000073921	PICALM	chr11:85694986-85707899	-	ES	150	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,150,31	85695016,85701293,85701442,85707869	No	No	No	bcc_13916|Cycle_0|Type_1	30,31	85695016,85707869	psi1:0.587155963303,psi2:0.25	C1_64,C2_12	C1_45,C2_36	Yes
ENSG00000156639	ZFAND3	chr6:37787761-38029398	+	ES	41	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,41,30	37787792,37897735,37897775,38029369	No	No	No	bcc_1992|Cycle_0|Type_1	31,30	37787792,38029369	psi1:0.857142857143,psi2:1.0	C1_12,C2_25	C1_2,C2_0	Yes
ENSG00000110514	MADD	chr11:47308054-47310969	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,60,28	47308085,47310519,47310578,47310942	No	No	No	bcc_54682|Cycle_0|Type_1	31,28	47308085,47310942	psi1:0.615384615385,psi2:0.25	C1_8,C2_1	C1_5,C2_3	Yes
ENSG00000204842	ATXN2	chr12:111954138-111956083	-	altA	36	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):111956053,111954167	65,31	111954203,111956053	No	No	No	bcc_15866|Cycle_0|Type_1	29,31	111954167,111956053	psi1:0.363636363636,psi2:0	C1_8,C2_0	C1_14,C2_5	(GC:111956053,CT:111954203);(GC:111956053,CT:111954167)
ENSG00000127603	MACF1	chr1:39929329-39934316	+	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,18,30	39929358,39930767,39930784,39934287	No	No	No	bcc_16569|Cycle_0|Type_1	29,30	39929358,39934287	psi1:0.6,psi2:0.904761904762	C1_27,C2_19	C1_18,C2_2	Yes
ENSG00000119431	HDHD3	chr9:116137777-116139039	-	altA	41	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	70,31	116137847,116139009	No	No	No	bcc_66647|Cycle_0|Type_1	29,31	116137806,116139009	psi1:1.0,psi2:0.666666666667	C1_4,C2_10	C1_0,C2_5	Yes
ENSG00000105662	CRTC1	chr19:18882326-18886481	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,87,31	18882356,18885710,18885796,18886451	No	No	No	bcc_75865|Cycle_0|Type_1	30,31	18882356,18886451	psi1:0.769230769231,psi2:1.0	C1_10,C2_7	C1_3,C2_0	Yes
ENSG00000198721	ECI2	chr6:4133906-4135775	-	altA	10	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	39,31	4133945,4135745	No	No	No	bcc_52435|Cycle_0|Type_1	29,31	4133935,4135745	psi1:0.727272727273,psi2:0.375	C1_16,C2_24	C1_6,C2_40	Yes
ENSG00000153113	CAST	chr5:96063204-96065344	+	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,57,29	96063234,96064857,96064913,96065316	No	No	No	bcc_38162|Cycle_0|Type_1	30,29	96063234,96065316	psi1:0.72972972973,psi2:0.947368421053	C1_27,C2_54	C1_10,C2_3	Yes
ENSG00000196873	CBWD3	chr9:70863784-70873476	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,60,29	70863813,70871837,70871896,70873448	Yes	Yes	No	bcc_11222|Cycle_13|Type_1	29,29	70863813,70873448	psi1:0.551724137931,psi2:0.833333333333	C1_16,C2_35	C1_13,C2_7	(GT:70871896,AG:70873448);(GT:70863813,AG:70873448);(GT:70863813,AC:70871837)
ENSG00000103485	QPRT	chr16:29706489-29708345	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):29706520,29708317	31,32	29706520,29708314	No	No	No	bcc_6823|Cycle_2|Type_1	31,29	29706520,29708317	psi1:0,psi2:0.307692307692	C1_0,C2_4	C1_4,C2_9	Yes
ENSG00000183077	AFMID	chr17:76187110-76203020	+	ES_MULTI	731	Yes	Yes	protein_coding	all_splice_sites_known_(18_ss)	31,105,49,86,73,98,79,136,105,29	76187141,76198580,76198684,76198784,76198832,76200737,76200822,76200909,76200981,76201174,76201271,76201521,76201599,76201684,76201819,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_24|Type_1	31,29	76187141,76202992	psi1:0.777777777778,psi2:0.986332574032	C1_21,C2_433	C1_6,C2_6	Yes
ENSG00000139641	ESYT1	chr12:56532252-56536098	+	ES_MULTI	159	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,72,87,30	56532283,56532552,56532623,56532711,56532797,56536069	No	No	No	bcc_44984|Cycle_0|Type_1	31,30	56532283,56536069	psi1:0.882352941176,psi2:1.0	C1_15,C2_61	C1_2,C2_0	Yes
ENSG00000163995	ABLIM2	chr4:8009895-8010807	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	8009927,8010777	No	No	No	bcc_69029|Cycle_0|Type_1	29,31	8009924,8010777	psi1:0.565217391304,psi2:0	C1_13,C2_0	C1_10,C2_2	Yes
ENSG00000148341	SH3GLB2	chr9:131772483-131776720	-	ES	63	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	5,24,63,31	131772488,131772949,131772972,131774515,131774577,131776690	No	Yes	No	bcc_20575|Cycle_6|Type_1	5,24,31	131772488,131772949,131772972,131776690	psi1:0.733333333333,psi2:1.0	C1_22,C2_12	C1_8,C2_0	Yes
ENSG00000183077	AFMID	chr17:76187110-76203020	+	ES_MULTI	259	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,105,49,105,29	76187141,76198580,76198684,76198784,76198832,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_33|Type_1	31,29	76187141,76202992	psi1:0.769230769231,psi2:0.981927710843	C1_20,C2_326	C1_6,C2_6	Yes
ENSG00000168610	STAT3	chr17:40500509-40540327	-	altA	19	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	48,31	40500557,40540297	No	Yes	No	bcc_8718|Cycle_6|Type_1	29,31	40500538,40540297	psi1:1.0,psi2:0.625	C1_5,C2_15	C1_0,C2_9	Yes
ENSG00000122490	PQLC1	chr18:77679369-77703359	-	ES_MULTI	138	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,84,54,31	77679400,77690228,77690311,77693969,77694022,77703329	No	Yes	No	bcc_20391|Cycle_0|Type_1	31,31	77679400,77703329	psi1:0.909090909091,psi2:0.55	C1_10,C2_22	C1_1,C2_18	Yes
ENSG00000175061	FAM211A-AS1	chr17:16342697-16343528	+	ES	123	No	-	processed_transcript	all_splice_sites_known_(4_ss)	31,123,30	16342728,16342895,16343017,16343499	No	Yes	No	bcc_27470|Cycle_2|Type_1	31,30	16342728,16343499	psi1:0.697368421053,psi2:0.379562043796	C1_53,C2_52	C1_23,C2_85	Yes
ENSG00000177728	KIAA0195	chr17:73489643-73489901	+	altA	94	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):73489674,73489780	31,122	73489674,73489780	No	No	No	bcc_44708|Cycle_0|Type_1	31,28	73489674,73489874	psi1:1.0,psi2:0.875	C1_40,C2_14	C1_0,C2_2	Yes
ENSG00000171703	TCEA2	chr20:62694707-62695300	+	altA	26	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):62694737,62695245	30,56	62694737,62695245	No	No	No	bcc_60302|Cycle_0|Type_1	30,30	62694737,62695271	psi1:0.352941176471,psi2:1.0	C1_6,C2_1	C1_11,C2_0	Yes
ENSG00000204653	ASPDH	chr19:51015807-51016214	-	ES	150	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,150,31	51015837,51015918,51016067,51016184	No	No	No	bcc_55321|Cycle_0|Type_1	30,31	51015837,51016184	psi1:0.666666666667,psi2:0.909090909091	C1_4,C2_10	C1_2,C2_1	Yes
ENSG00000035928	RFC1	chr4:39308291-39310284	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,29	39308324,39310256	No	No	No	bcc_47990|Cycle_0|Type_1	30,29	39308321,39310256	psi1:0.210526315789,psi2:0.5	C1_4,C2_8	C1_15,C2_8	Yes
ENSG00000148516	ZEB1	chr10:31750135-31784738	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	31750166,31784705	No	No	No	bcc_6183|Cycle_0|Type_1	31,31	31750166,31784708	psi1:0.631578947368,psi2:1.0	C1_12,C2_4	C1_7,C2_0	Yes
ENSG00000183077	AFMID	chr17:76187110-76203020	+	ES_MULTI	595	Yes	Yes	protein_coding	all_splice_sites_known_(16_ss)	31,105,49,86,73,98,79,105,29	76187141,76198580,76198684,76198784,76198832,76200737,76200822,76200909,76200981,76201174,76201271,76201521,76201599,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_34|Type_1	31,29	76187141,76202992	psi1:0.777777777778,psi2:0.984084880637	C1_21,C2_371	C1_6,C2_6	Yes
ENSG00000070610	GBA2	chr9:35738598-35738844	-	altD	66	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):35738629,35738749	31,96	35738629,35738749	No	No	No	bcc_53797|Cycle_0|Type_1	31,30	35738629,35738815	psi1:1.0,psi2:0.833333333333	C1_37,C2_30	C1_0,C2_6	Yes
ENSG00000065665	SEC61A2	chr10:12200001-12202959	+	altD	73	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):12200104,12202929	103,31	12200104,12202929	No	No	No	bcc_7630|Cycle_0|Type_1	30,31	12200031,12202929	psi1:1.0,psi2:0.875	C1_39,C2_14	C1_0,C2_2	Yes
ENSG00000147996	CBWD5	chr9:70473445-70483216	-	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,60,29	70473474,70475019,70475078,70483188	Yes	Yes	No	bcc_11222|Cycle_12|Type_1	29,29	70473474,70483188	psi1:0.566666666667,psi2:0.840909090909	C1_17,C2_37	C1_13,C2_7	Yes
ENSG00000091527	CDV3	chr3:133305535-133306770	+	altA	737	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,768	133305566,133306003	No	Yes	No	bcc_33121|Cycle_42|Type_1	31,31	133305566,133306740	psi1:0.764705882353,psi2:0.964824120603	C1_117,C2_192	C1_36,C2_7	Yes
ENSG00000011485	PPP5C	chr19:46879801-46887065	+	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,66,29	46879831,46886668,46886733,46887037	No	No	No	bcc_59753|Cycle_0|Type_1	30,29	46879831,46887037	psi1:0.825,psi2:1.0	C1_33,C2_36	C1_7,C2_0	Yes
ENSG00000063245	EPN1	chr19:56186770-56189921	+	ES_MULTI	205	Yes	Yes	protein_coding	4_ss_annotated_(over_6_ss):56189893,56188584,56186801,56188916	31,173,32,29	56186801,56188412,56188584,56188916,56188947,56189893	No	Yes	No	bcc_58663|Cycle_0|Type_1	31,29	56186801,56189893	psi1:0,psi2:0.592592592593	C1_0,C2_32	C1_4,C2_22	Yes
ENSG00000198677	TTC37	chr5:94882824-94884294	-	altD	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):94884264,94882855	31,34	94882855,94884261	No	No	No	bcc_63626|Cycle_0|Type_1	31,31	94882855,94884264	psi1:0,psi2:0.272727272727	C1_0,C2_3	C1_4,C2_8	Yes
ENSG00000173120	KDM2A	chr11:66999267-67010508	+	altD	133	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):67010480,66999431	164,29	66999431,67010480	No	No	No	bcc_61982|Cycle_0|Type_1	31,29	66999298,67010480	psi1:0.818181818182,psi2:1.0	C1_9,C2_9	C1_2,C2_0	(GC:66999298,AG:67010480);(GT:66999431,AG:67010480)
ENSG00000198546	ZNF511	chr10:135125289-135126320	+	altD	25	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):135125345,135126292	56,29	135125345,135126292	No	No	No	bcc_61433|Cycle_0|Type_1	31,29	135125320,135126292	psi1:1.0,psi2:0.818181818182	C1_9,C2_9	C1_0,C2_2	Yes
ENSG00000106028	SSBP1	chr7:141438273-141438954	+	altD	72	No	-	protein_coding	all_splice_sites_known_(3_ss)	102,31	141438375,141438924	No	No	No	bcc_48145|Cycle_0|Type_1	30,31	141438303,141438924	psi1:0.133333333333,psi2:0.4	C1_2,C2_6	C1_13,C2_9	Yes
ENSG00000130813	C19orf66	chr19:10197945-10200363	+	ES_MULTI	170	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,98,72,31	10197976,10199787,10199884,10199983,10200054,10200333	No	No	No	bcc_16489|Cycle_0|Type_1	31,31	10197976,10200333	psi1:0,psi2:0.346153846154	C1_0,C2_18	C1_12,C2_34	Yes
ENSG00000144785,ENSG00000257727	RP11-977G19.10,CNPY2	chr12:56708997-56709718	-	altD	86	Yes	-	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	29,114	56709026,56709605	No	No	No	bcc_1094|Cycle_0|Type_1	29,28	56709026,56709691	psi1:1.0,psi2:0.739130434783	C1_9,C2_17	C1_0,C2_6	Yes
ENSG00000166579	NDEL1	chr17:8363448-8370276	+	ES	35	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,35,29	8363478,8366638,8366672,8370248	No	No	No	bcc_2607|Cycle_0|Type_1	30,29	8363478,8370248	psi1:0.117647058824,psi2:0.375	C1_2,C2_3	C1_15,C2_5	Yes
ENSG00000141027	NCOR1	chr17:15968979-15973509	-	ES	228	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,228,31	15969008,15971208,15971435,15973479	No	No	No	bcc_47114|Cycle_1|Type_1	29,31	15969008,15973479	psi1:1.0,psi2:0.84	C1_27,C2_21	C1_0,C2_4	Yes
ENSG00000145833	DDX46	chr5:134152263-134153216	+	altD	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	134152296,134153186	No	No	No	bcc_44227|Cycle_0|Type_1	30,31	134152293,134153186	psi1:0.8,psi2:0.5	C1_4,C2_4	C1_1,C2_4	(GT:134152293,AG:134153186);(TT:134152296,AG:134153186)
ENSG00000188732	FAM221A	chr7:23737887-23740437	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):23740405,23737918	31,33	23737918,23740405	No	Yes	No	bcc_16082|Cycle_1|Type_1	31,30	23737918,23740408	psi1:1.0,psi2:0.7	C1_3,C2_7	C1_0,C2_3	Yes
ENSG00000138777	PPA2	chr4:106345450-106367569	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,87,30	106345479,106359107,106359193,106367540	No	No	No	bcc_13417|Cycle_0|Type_1	29,30	106345479,106367540	psi1:0.846153846154,psi2:0.992481203008	C1_55,C2_132	C1_10,C2_1	Yes
ENSG00000175309	PHYKPL	chr5:177638941-177641827	-	ES	131	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,131,31	177638971,177639974,177640104,177641797	No	No	No	bcc_48029|Cycle_0|Type_1	30,31	177638971,177641797	psi1:0.8,psi2:0.977011494253	C1_16,C2_85	C1_4,C2_2	Yes
ENSG00000127483	HP1BP3	chr1:21106376-21113718	-	ES	196	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	28,196,31	21106404,21106838,21107033,21113688	No	No	No	bcc_9805|Cycle_0|Type_1	28,31	21106404,21113688	psi1:0.630434782609,psi2:0.9	C1_29,C2_27	C1_17,C2_3	Yes
ENSG00000114626	ABTB1	chr3:127393232-127393418	+	altD	35	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	64,31	127393296,127393388	No	No	No	bcc_76961|Cycle_0|Type_1	29,31	127393261,127393388	psi1:0.625,psi2:0	C1_10,C2_0	C1_6,C2_1	Yes
ENSG00000130731	C16orf13	chr16:684926-685311	-	altA	56	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):685281,684956	86,31	685012,685281	No	Yes	No	bcc_62804|Cycle_2|Type_1	30,31	684956,685281	psi1:0.214285714286,psi2:0.5	C1_3,C2_5	C1_11,C2_5	Yes
ENSG00000059691	PET112	chr4:152592424-152600993	-	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,135,29	152592454,152593914,152594048,152600965	No	No	No	bcc_50509|Cycle_0|Type_1	30,29	152592454,152600965	psi1:1.0,psi2:0.875	C1_35,C2_14	C1_0,C2_2	Yes
ENSG00000079974	RABL2B	chr22:51207524-51207913	-	altD	30	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,61	51207552,51207853	Yes	Yes	No	bcc_19564|Cycle_6|Type_1	28,31	51207552,51207883	psi1:0.52380952381,psi2:0.166666666667	C1_11,C2_1	C1_10,C2_5	Yes
ENSG00000144134	RABL2A	chr2:114398996-114399385	+	altD	30	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	61,28	114399057,114399358	Yes	Yes	No	bcc_19564|Cycle_6|Type_1	31,28	114399027,114399358	psi1:0.52380952381,psi2:0.166666666667	C1_11,C2_1	C1_10,C2_5	Yes
ENSG00000183077	AFMID	chr17:76187110-76203020	+	ES_MULTI	645	No	Yes	protein_coding	all_splice_sites_known_(16_ss)	31,105,49,73,98,79,136,105,29	76187141,76198580,76198684,76198784,76198832,76200909,76200981,76201174,76201271,76201521,76201599,76201684,76201819,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_25|Type_1	31,29	76187141,76202992	psi1:0.785714285714,psi2:0.985148514851	C1_22,C2_398	C1_6,C2_6	Yes
ENSG00000247077	PGAM5	chr12:133294353-133294605	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	133294384,133294573	No	No	No	bcc_1371|Cycle_0|Type_1	31,30	133294384,133294576	psi1:0.727272727273,psi2:0.428571428571	C1_8,C2_3	C1_3,C2_4	Yes
ENSG00000013561	RNF14	chr5:141353276-141362974	+	ES_MULTI	381	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,152,229,30	141353307,141354369,141354520,141359688,141359916,141362945	No	Yes	No	bcc_50866|Cycle_11|Type_1	31,30	141353307,141362945	psi1:0.829268292683,psi2:1.0	C1_68,C2_74	C1_14,C2_0	Yes
ENSG00000055332	EIF2AK2	chr2:37334492-37334644	-	altA	15	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):37334617,37334538	46,28	37334538,37334617	No	No	No	bcc_41342|Cycle_0|Type_1	31,28	37334523,37334617	psi1:0.846153846154,psi2:1.0	C1_11,C2_15	C1_2,C2_0	Yes
ENSG00000164985	PSIP1	chr9:15472515-15472660	+	IR	83	Yes	Yes	protein_coding	no_known_ss	145	-	No	Yes	No	bcc_9325|Cycle_35|Type_1	31,31	15472546,15472630	psi1:0.708333333333,psi2:0	C1_34,C2_0	C1_14,C2_2	(CT:15472546,AC:15472630)
ENSG00000080503	SMARCA2	chr9:2161872-2181599	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,29	2161903,2170419,2170472,2181571	No	No	No	bcc_33892|Cycle_0|Type_1	31,29	2161903,2181571	psi1:0.119047619048,psi2:0.37037037037	C1_5,C2_10	C1_37,C2_17	Yes
ENSG00000074416	MGLL	chr3:127414004-127439923	-	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,90,28	127414033,127429419,127429508,127439896	No	No	No	bcc_22890|Cycle_0|Type_1	29,28	127414033,127439896	psi1:0.805555555556,psi2:1.0	C1_29,C2_24	C1_7,C2_0	Yes
ENSG00000167978	SRRM2	chr16:2818231-2819024	+	ES	95	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,95,27	2818262,2818506,2818600,2818998	No	No	No	bcc_3895|Cycle_0|Type_1	31,27	2818262,2818998	psi1:0.0952380952381,psi2:0.333333333333	C1_2,C2_5	C1_19,C2_10	Yes
ENSG00000170855	TRIAP1	chr12:120882234-120882298	-	deletion	3	No	-	protein_coding	no_known_ss	64	120882234	No	No	No	bcc_44391|Cycle_0|Type_1	30,31	120882264,120882268	psi1:1.0,psi2:0.695652173913	C1_13,C2_32	C1_0,C2_14	-
ENSG00000129103	SUMF2	chr7:56140773-56144556	+	ES_MULTI	196	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,45,151,30	56140804,56141867,56141911,56142279,56142429,56144527	No	Yes	No	bcc_15514|Cycle_2|Type_1	31,30	56140804,56144527	psi1:0.885714285714,psi2:1.0	C1_31,C2_103	C1_4,C2_0	Yes
ENSG00000111832	RWDD1	chr6:116892787-116895250	+	ES	128	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,128,30	116892818,116894021,116894148,116895221	No	Yes	No	bcc_43365|Cycle_2|Type_1	31,30	116892818,116895221	psi1:0.745762711864,psi2:0	C1_44,C2_0	C1_15,C2_2	Yes
ENSG00000100796	SMEK1	chr14:91928536-91929109	-	altA	18	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	47,31	91928583,91929079	No	No	No	bcc_33255|Cycle_0|Type_1	29,31	91928565,91929079	psi1:1.0,psi2:0.869565217391	C1_41,C2_20	C1_0,C2_3	Yes
ENSG00000256599	AC020663.1	chr16:4854121-4854553	-	IR	373	Yes	-	pseudogene	no_known_ss	432	-	No	Yes	No	bcc_20349|Cycle_2|Type_1	28,31	4854149,4854523	psi1:0.754385964912,psi2:0.954022988506	C1_43,C2_83	C1_14,C2_4	Yes
ENSG00000145740	SLC30A5	chr5:68390134-68398918	+	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,123,30	68390165,68396634,68396756,68398889	No	No	No	bcc_48872|Cycle_2|Type_1	31,30	68390165,68398889	psi1:1.0,psi2:0.769230769231	C1_6,C2_10	C1_0,C2_3	Yes
ENSG00000183077	AFMID	chr17:76187110-76203020	+	ES_MULTI	509	Yes	Yes	protein_coding	all_splice_sites_known_(14_ss)	31,105,49,73,98,79,105,29	76187141,76198580,76198684,76198784,76198832,76200909,76200981,76201174,76201271,76201521,76201599,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_38|Type_1	31,29	76187141,76202992	psi1:0.785714285714,psi2:0.982456140351	C1_22,C2_336	C1_6,C2_6	Yes
ENSG00000052723	SIKE1	chr1:115321877-115323038	-	ES	106	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	28,106,31	115321905,115322731,115322836,115323008	No	No	No	bcc_54427|Cycle_0|Type_1	28,31	115321905,115323008	psi1:0.846153846154,psi2:1.0	C1_11,C2_14	C1_2,C2_0	Yes
ENSG00000163565	IFI16	chr1:159002450-159021498	+	ES	168	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,168,30	159002481,159019222,159019389,159021469	No	No	No	bcc_42268|Cycle_0|Type_1	31,30	159002481,159021469	psi1:0.981818181818,psi2:0.823529411765	C1_54,C2_14	C1_1,C2_3	Yes
ENSG00000217555	CKLF	chr16:66586666-66597055	+	ES	159	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,159,31	66586696,66592093,66592251,66597025	No	No	No	bcc_61563|Cycle_0|Type_1	30,31	66586696,66597025	psi1:0.952380952381,psi2:0.730769230769	C1_20,C2_19	C1_1,C2_7	Yes
ENSG00000102738	MRPS31	chr13:41328199-41331039	-	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):41331009,41328228	35,31	41328234,41331009	No	No	No	bcc_9088|Cycle_0|Type_1	29,31	41328228,41331009	psi1:0,psi2:0.1875	C1_0,C2_3	C1_11,C2_13	(AC:41331009,CC:41328234);(AC:41331009,CT:41328228)
ENSG00000163577	EIF5A2	chr3:170609308-170609370	-	deletion	3	No	-	protein_coding	no_known_ss	62	170609308	No	No	No	bcc_61337|Cycle_0|Type_1	28,31	170609336,170609340	psi1:0.541666666667,psi2:1.0	C1_13,C2_3	C1_11,C2_0	-
ENSG00000102805	CLN5	chr13:77570231-77574623	+	ES	43	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):77574593,77570262	31,43,31	77570262,77572178,77572220,77574593	No	No	No	bcc_49757|Cycle_0|Type_1	31,31	77570262,77574593	psi1:0.117647058824,psi2:0.363636363636	C1_2,C2_4	C1_15,C2_7	Yes
ENSG00000147853	AK3	chr9:4713950-4714080	+	altAD	26	Yes	-	protein_coding	no_known_ss	17,69	4713967,4714012	Yes	Yes	No	bcc_75224|Cycle_199|Type_1	33,27	4713983,4714054	psi1:0.571428571429,psi2:1.0	C1_4,C2_1	C1_3,C2_0	(CT:4713983,AC:4714054);(CT:4713967,AC:4714012)
ENSG00000214078,ENSG00000244462	CPNE1,RBM12	chr20:34220815-34252712	-	ES_MULTI	196	Yes	-	protein_coding,protein_coding	all_splice_sites_known_(6_ss)	30,143,53,31	34220845,34243124,34243266,34246852,34246904,34252682	No	Yes	No	bcc_6829|Cycle_1|Type_1	30,31	34220845,34252682	psi1:0.904761904762,psi2:0.666666666667	C1_19,C2_6	C1_2,C2_3	Yes
ENSG00000137693	YAP1	chr11:102076775-102094380	+	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,48,28	102076805,102080248,102080295,102094353	No	Yes	No	bcc_39903|Cycle_1|Type_1	30,28	102076805,102094353	psi1:0.4,psi2:0.714285714286	C1_6,C2_5	C1_9,C2_2	Yes
ENSG00000156171	DRAM2	chr1:111680177-111682189	-	altD	36	No	-	protein_coding	2_ss_annotated_(over_3_ss):111680208,111682123	31,67	111680208,111682123	No	No	No	bcc_12090|Cycle_0|Type_1	31,31	111680208,111682159	psi1:1.0,psi2:0.8	C1_6,C2_8	C1_0,C2_2	(AA:111682159,CT:111680208);(AC:111682123,CT:111680208)
ENSG00000111666	CHPT1	chr12:102110559-102116976	+	ES	132	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,132,31	102110590,102113901,102114032,102116946	No	No	No	bcc_39895|Cycle_0|Type_1	31,31	102110590,102116946	psi1:0.865168539326,psi2:1.0	C1_154,C2_268	C1_24,C2_0	Yes
ENSG00000125870	SNRPB2	chr20:16710678-16712342	+	altD	100	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	131,30	16710809,16712313	No	No	No	bcc_28718|Cycle_0|Type_1	31,30	16710709,16712313	psi1:0.6,psi2:0.866666666667	C1_12,C2_13	C1_8,C2_2	Yes
ENSG00000143727	ACP1	chr2:271911-272222	+	ES	29	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,29,31	271939,272037,272065,272192	No	No	No	bcc_43474|Cycle_2|Type_1	28,31	271939,272192	psi1:1.0,psi2:0.586956521739	C1_7,C2_27	C1_0,C2_19	Yes
ENSG00000141002	TCF25	chr16:89965250-89967072	+	altD	15	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):89965280,89967043	45,30	89965295,89967043	No	No	No	bcc_36117|Cycle_0|Type_1	30,30	89965280,89967043	psi1:0.03125,psi2:0.210526315789	C1_1,C2_4	C1_31,C2_15	Yes
ENSG00000141127	PRPSAP2	chr17:18769234-18775926	+	ES	53	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,53,31	18769265,18770595,18770647,18775896	No	No	No	bcc_51956|Cycle_4|Type_1	31,31	18769265,18775896	psi1:0.981132075472,psi2:0.823529411765	C1_52,C2_14	C1_1,C2_3	Yes
ENSG00000153113	CAST	chr5:96058373-96063221	+	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,66,29	96058402,96062498,96062563,96063193	No	No	No	bcc_38161|Cycle_0|Type_1	29,29	96058402,96063193	psi1:0.875,psi2:0.608695652174	C1_14,C2_14	C1_2,C2_9	Yes
ENSG00000179950	PUF60	chr8:144900674-144903792	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,51,26	144900704,144902836,144902886,144903767	No	No	No	bcc_57180|Cycle_0|Type_1	30,26	144900704,144903767	psi1:0.933333333333,psi2:0.709677419355	C1_28,C2_22	C1_2,C2_9	Yes
ENSG00000130177	CDC16	chr13:115022633-115022696	+	deletion	3	No	Yes	protein_coding	no_known_ss	63	115022633	No	No	No	bcc_47795|Cycle_0|Type_1	29,31	115022662,115022666	psi1:0.882352941176,psi2:1.0	C1_15,C2_38	C1_2,C2_0	-
ENSG00000075945	KIFAP3	chr1:169890893-169923181	-	ES	69	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):169923152,169890922	29,69,30	169890922,169894928,169894996,169923152	No	No	No	bcc_49158|Cycle_0|Type_1	29,30	169890922,169923152	psi1:0.778378378378,psi2:0.25	C1_144,C2_3	C1_41,C2_9	Yes
ENSG00000013306	SLC25A39	chr17:42399865-42400206	-	altA	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	55,31	42399920,42400176	No	No	No	bcc_14649|Cycle_0|Type_1	31,31	42399896,42400176	psi1:0.125,psi2:0.549019607843	C1_1,C2_28	C1_7,C2_23	Yes
ENSG00000173598	NUDT4	chr12:93789278-93792575	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	93789309,93792544	No	No	No	bcc_11538|Cycle_0|Type_1	31,29	93789309,93792547	psi1:0.214285714286,psi2:0.541666666667	C1_21,C2_13	C1_77,C2_11	Yes
ENSG00000198015	MRPL42	chr12:93896734-93896799	-	deletion	3	No	-	protein_coding	no_known_ss	65	93896734	No	No	No	bcc_58722|Cycle_0|Type_1	31,31	93896765,93896769	psi1:0.222222222222,psi2:0.5	C1_2,C2_4	C1_7,C2_4	-
ENSG00000140299	BNIP2	chr15:59956288-59961121	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,36,31	59956319,59960302,59960337,59961091	No	No	No	bcc_48417|Cycle_0|Type_1	31,31	59956319,59961091	psi1:0.588235294118,psi2:0.3	C1_10,C2_6	C1_7,C2_14	Yes
ENSG00000163626	COX18	chr4:73930587-73930997	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	73930619,73930967	No	No	No	bcc_59703|Cycle_0|Type_1	29,31	73930616,73930967	psi1:0.1,psi2:0.333333333333	C1_1,C2_2	C1_9,C2_4	Yes
ENSG00000163608	C3orf17	chr3:112724760-112727048	-	altA	62	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):112727018,112724851	91,31	112724851,112727018	No	No	No	bcc_49215|Cycle_0|Type_1	29,31	112724789,112727018	psi1:1.0,psi2:0.882352941176	C1_37,C2_15	C1_0,C2_2	Yes
ENSG00000110274	CEP164	chr11:117266408-117266800	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):117266770,117266438	30,31	117266438,117266770	No	No	No	bcc_80138|Cycle_0|Type_1	30,28	117266438,117266773	psi1:0.75,psi2:1.0	C1_6,C2_3	C1_2,C2_0	Yes
ENSG00000100813	ACIN1	chr14:23533663-23535204	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,30	23533697,23535175	No	No	No	bcc_64439|Cycle_0|Type_1	31,30	23533694,23535175	psi1:0.6,psi2:0.3	C1_3,C2_3	C1_2,C2_7	Yes
ENSG00000159208	C1orf51	chr1:150254997-150255949	+	altA	52	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,78	150255028,150255872	No	No	No	bcc_64198|Cycle_0|Type_1	31,26	150255028,150255924	psi1:0.666666666667,psi2:1.0	C1_6,C2_2	C1_3,C2_0	Yes
ENSG00000132330	SCLY	chr2:239007728-239007789	-	deletion	3	No	-	protein_coding	no_known_ss	61	239007728	No	No	No	bcc_60390|Cycle_0|Type_1	27,31	239007755,239007759	psi1:0.75,psi2:0.416666666667	C1_3,C2_5	C1_1,C2_7	-
ENSG00000113742	CPEB4	chr5:173337579-173371999	+	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,51,30	173337607,173359453,173359503,173371970	No	Yes	No	bcc_5909|Cycle_0|Type_1	28,30	173337607,173371970	psi1:0.636363636364,psi2:0.909090909091	C1_14,C2_10	C1_8,C2_1	Yes
ENSG00000173320	STOX2	chr4:184941174-184941233	+	deletion	3	No	-	protein_coding	no_known_ss	59	184941174	No	No	No	bcc_31793|Cycle_0|Type_1	25,31	184941199,184941203	psi1:0.6875,psi2:1.0	C1_11,C2_4	C1_5,C2_0	-
ENSG00000103342	GSPT1	chr16:11990608-11991727	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,31	11990642,11991697	No	Yes	Yes	bcc_24602|Cycle_1|Type_1	31,31	11990639,11991697	psi1:0,psi2:0.25	C1_0,C2_2	C1_3,C2_6	Yes
ENSG00000166012	TAF1D	chr11:93463583-93464343	-	ES	36	No	-	protein_coding	all_splice_sites_known_(4_ss)	30,36,28	93463613,93463843,93463878,93464316	No	Yes	No	bcc_16773|Cycle_2|Type_1	30,28	93463613,93464316	psi1:0.981981981982,psi2:0.826923076923	C1_109,C2_43	C1_2,C2_9	(GC:93464316,CT:93463878);(GC:93464316,CT:93463613);(AC:93463843,CT:93463613)
ENSG00000005486	RHBDD2	chr7:75508547-75511175	+	ES	122	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,122,29	75508578,75510683,75510804,75511147	No	Yes	No	bcc_61225|Cycle_1|Type_1	31,29	75508578,75511147	psi1:0.169491525424,psi2:0.432432432432	C1_10,C2_16	C1_49,C2_21	Yes
ENSG00000143486	EIF2D	chr1:206772415-206773115	-	ES	150	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,150,29	206772446,206772817,206772966,206773087	No	No	No	bcc_53006|Cycle_0|Type_1	31,29	206772446,206773087	psi1:0.894736842105,psi2:1.0	C1_17,C2_63	C1_2,C2_0	Yes
ENSG00000196628	TCF4	chr18:52896280-52899782	-	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	27,43	52896307,52899740	No	No	No	bcc_22690|Cycle_0|Type_1	27,31	52896307,52899752	psi1:0.552631578947,psi2:0	C1_21,C2_0	C1_17,C2_3	Yes
ENSG00000236850,ENSG00000272779	BMS1P20,LL22NC03-80A10.6	chr22:22658448-22661224	+	altA	43	Yes	-	processed_transcript,pseudogene	all_splice_sites_known_(3_ss)	31,70	22658479,22661155	No	No	No	bcc_49689|Cycle_0|Type_1	31,27	22658479,22661198	psi1:0.522727272727,psi2:0.125	C1_23,C2_1	C1_21,C2_7	Yes
ENSG00000166333	ILK	chr11:6625559-6629653	+	ES	166	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,166,30	6625590,6629276,6629441,6629624	No	No	No	bcc_26209|Cycle_1|Type_1	31,30	6625590,6629624	psi1:0.822222222222,psi2:1.0	C1_37,C2_32	C1_8,C2_0	Yes
ENSG00000087274	ADD1	chr4:2906711-2909499	+	altD	93	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	124,30	2906835,2909470	No	No	No	bcc_54279|Cycle_0|Type_1	31,30	2906742,2909470	psi1:0.617647058824,psi2:0.166666666667	C1_147,C2_5	C1_91,C2_25	Yes
ENSG00000007341	ST7L	chr1:113159436-113161561	-	altA	51	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	81,31	113159517,113161531	No	Yes	No	bcc_71140|Cycle_0|Type_1	30,31	113159466,113161531	psi1:0.833333333333,psi2:0.571428571429	C1_10,C2_4	C1_2,C2_3	Yes
ENSG00000214078,ENSG00000244462	CPNE1,RBM12	chr20:34220815-34252712	-	ES	143	Yes	-	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,143,31	34220845,34243124,34243266,34252682	No	Yes	No	bcc_6829|Cycle_2|Type_1	30,31	34220845,34252682	psi1:0.833333333333,psi2:0.571428571429	C1_10,C2_4	C1_2,C2_3	Yes
ENSG00000113161	HMGCR	chr5:74650491-74651220	+	ES	159	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,159,31	74650522,74650881,74651039,74651190	No	No	No	bcc_45435|Cycle_0|Type_1	31,31	74650522,74651190	psi1:0.720930232558,psi2:0.932203389831	C1_31,C2_55	C1_12,C2_4	Yes
ENSG00000101166	SLMO2	chr20:57610150-57611585	-	altD	30	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):57610181,57611526	31,60	57610181,57611526	No	No	No	bcc_344|Cycle_0|Type_1	31,30	57610181,57611556	psi1:1.0,psi2:0.88	C1_48,C2_22	C1_0,C2_3	(AC:57611526,CT:57610181);(GC:57611556,CT:57610181)
ENSG00000198363	ASPH	chr8:62557161-62563639	-	ES	129	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,129,31	62557191,62559309,62559437,62563609	No	No	No	bcc_2860|Cycle_0|Type_1	30,31	62557191,62563609	psi1:0.967289719626,psi2:0.792207792208	C1_207,C2_61	C1_7,C2_16	Yes
ENSG00000118514	ALDH8A1	chr6:135239974-135253943	-	ES	162	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,162,30	135240005,135250192,135250353,135253914	No	No	No	bcc_13100|Cycle_0|Type_1	31,30	135240005,135253914	psi1:0,psi2:0.89847715736	C1_0,C2_177	C1_2,C2_20	Yes
ENSG00000163697	APBB2	chr4:41035290-41102686	-	ES	98	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,98,31	41035321,41067593,41067690,41102656	No	No	No	bcc_17616|Cycle_0|Type_1	31,31	41035321,41102656	psi1:0.888888888889,psi2:0.5	C1_24,C2_1	C1_3,C2_1	Yes
ENSG00000128283	CDC42EP1	chr22:37964382-37964460	+	deletion	21	No	Yes	protein_coding	no_known_ss	78	37964382	No	Yes	No	bcc_21420|Cycle_0|Type_1	32,25	37964414,37964436	psi1:1.0,psi2:0.714285714286	C1_2,C2_5	C1_0,C2_2	-
ENSG00000167491	GATAD2A	chr19:19576392-19603419	+	ES_MULTI	132	No	Yes	protein_coding	4_ss_annotated_(over_6_ss):19576423,19603115,19603247,19603390	31,125,7,30	19576423,19603115,19603239,19603241,19603247,19603390	No	Yes	No	bcc_59034|Cycle_5|Type_1	31,30	19576423,19603390	psi1:0.823529411765,psi2:1.0	C1_14,C2_12	C1_3,C2_0	(GT:19576423,AG:19603390);(GT:19576423,AG:19603115);(GT:19603247,AG:19603390);-
ENSG00000005486	RHBDD2	chr7:75508547-75511175	+	ES	126	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):75508578,75510683,75511147	31,126,29	75508578,75510683,75510808,75511147	No	Yes	No	bcc_61225|Cycle_2|Type_1	31,29	75508578,75511147	psi1:0.109090909091,psi2:0.34375	C1_6,C2_11	C1_49,C2_21	Yes
ENSG00000170632	ARMC10	chr7:102724246-102727107	+	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,33,31	102724277,102724477,102724509,102727077	No	No	No	bcc_15428|Cycle_0|Type_1	31,31	102724277,102727077	psi1:0.34375,psi2:0.103448275862	C1_11,C2_3	C1_21,C2_26	Yes
ENSG00000004866	ST7	chr7:116771983-116776164	+	ES	69	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,69,30	116772014,116774178,116774246,116776135	No	No	No	bcc_58130|Cycle_0|Type_1	31,30	116772014,116776135	psi1:0.5,psi2:0.777777777778	C1_5,C2_14	C1_5,C2_4	Yes
ENSG00000008128,ENSG00000268575	CDK11A,RP1-283E3.8	chr1:1653119-1654177	-	ES	47	Yes	Yes	protein_coding,processed_transcript	all_splice_sites_known_(4_ss)	31,47,31	1653150,1654027,1654073,1654147	No	No	No	bcc_16621|Cycle_0|Type_1	31,31	1653150,1654147	psi1:0.432432432432,psi2:0.133333333333	C1_16,C2_2	C1_21,C2_13	Yes
ENSG00000196586	MYO6	chr6:76602377-76617350	+	ES_MULTI	69	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,30,39,29	76602407,76604948,76604977,76608090,76608128,76617322	No	No	No	bcc_35018|Cycle_0|Type_1	30,29	76602407,76617322	psi1:0.645161290323,psi2:0.923076923077	C1_20,C2_12	C1_11,C2_1	Yes
ENSG00000100650	SRSF5	chr14:70233938-70234884	+	altD	129	No	-	protein_coding	all_splice_sites_known_(3_ss)	159,30	70234097,70234855	No	Yes	No	bcc_37430|Cycle_1|Type_1	30,30	70233968,70234855	psi1:0.806451612903,psi2:0.533333333333	C1_25,C2_8	C1_6,C2_7	Yes
ENSG00000102977	ACD	chr16:67692952-67693470	-	ES_MULTI	80	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,35,45,31	67692982,67693132,67693166,67693278,67693322,67693440	No	No	No	bcc_76153|Cycle_0|Type_1	30,31	67692982,67693440	psi1:0.777777777778,psi2:1.0	C1_7,C2_4	C1_2,C2_0	Yes
ENSG00000103657	HERC1	chr15:63954190-63955234	-	altD	21	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):63954220,63955183	30,52	63954220,63955183	No	No	No	bcc_69175|Cycle_0|Type_1	30,31	63954220,63955204	psi1:0.636363636364,psi2:1.0	C1_14,C2_4	C1_8,C2_0	Yes
ENSG00000172732	MUS81	chr11:65632585-65632752	+	altA	33	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):65632616,65632691	31,62	65632616,65632691	No	No	No	bcc_57882|Cycle_0|Type_1	31,29	65632616,65632724	psi1:1.0,psi2:0.777777777778	C1_4,C2_7	C1_0,C2_2	Yes
ENSG00000100219	XBP1	chr22:29192084-29192166	-	deletion	26	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):29192136,29192109	82	29192084	No	No	No	bcc_4308|Cycle_0|Type_1	25,31	29192109,29192136	psi1:0.7,psi2:0.956331877729	C1_14,C2_219	C1_6,C2_10	-
ENSG00000120802	TMPO	chr12:98931319-98940167	+	ES_MULTI	327	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,120,96,111,31	98931350,98938008,98938127,98938220,98938315,98938729,98938839,98940137	No	No	No	bcc_17624|Cycle_0|Type_1	31,31	98931350,98940137	psi1:0.730769230769,psi2:0.9375	C1_19,C2_30	C1_7,C2_2	Yes
ENSG00000137161	CNPY3	chr6:42902305-42903342	+	ES_altA	99	No	-	protein_coding	2_ss_annotated_(over_5_ss):42902336,42903312	31,62,68	42902336,42903150,42903211,42903275	No	Yes	No	bcc_62085|Cycle_1|Type_1	31,31	42902336,42903312	psi1:0.363636363636,psi2:0.102040816327	C1_4,C2_5	C1_7,C2_44	Yes
ENSG00000137161	CNPY3	chr6:42902305-42903342	+	ES	62	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):42902336,42903312	31,62,31	42902336,42903150,42903211,42903312	No	Yes	No	bcc_62085|Cycle_0|Type_1	31,31	42902336,42903312	psi1:0.363636363636,psi2:0.102040816327	C1_4,C2_5	C1_7,C2_44	Yes
ENSG00000023041	ZDHHC6	chr10:114201988-114203303	-	altA	92	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):114203273,114202109	121,31	114202109,114203273	No	No	No	bcc_3359|Cycle_0|Type_1	29,31	114202017,114203273	psi1:0.863636363636,psi2:1.0	C1_19,C2_27	C1_3,C2_0	Yes
ENSG00000232527	RP11-14N7.2	chr1:148932889-148951272	+	ES	78	No	-	lincRNA	all_splice_sites_known_(4_ss)	31,78,28	148932920,148933291,148933368,148951245	No	Yes	No	bcc_49665|Cycle_3|Type_1	31,28	148932920,148951245	psi1:0.6,psi2:1.0	C1_12,C2_3	C1_8,C2_0	Yes
ENSG00000103540	CCP110	chr16:19559305-19562547	+	ES	86	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,86,30	19559336,19559837,19559922,19562518	No	No	No	bcc_51993|Cycle_0|Type_1	31,30	19559336,19562518	psi1:0.714285714286,psi2:0	C1_20,C2_0	C1_8,C2_1	Yes
ENSG00000064115	TM7SF3	chr12:27152579-27167041	-	ES	155	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,155,31	27152609,27156169,27156323,27167011	No	No	No	bcc_22103|Cycle_0|Type_1	30,31	27152609,27167011	psi1:0.882352941176,psi2:1.0	C1_15,C2_31	C1_2,C2_0	Yes
ENSG00000082397	EPB41L3	chr18:5394761-5395638	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,81,31	5394792,5395066,5395146,5395608	No	Yes	No	bcc_40309|Cycle_0|Type_1	31,31	5394792,5395608	psi1:0.949771689498,psi2:0	C1_208,C2_0	C1_11,C2_1	Yes
ENSG00000105223	PLD3	chr19:40854644-40872353	+	ES_altA	304	Yes	-	protein_coding	all_splice_sites_known_(5_ss)	31,269,63	40854675,40871569,40871837,40872291	No	Yes	No	bcc_13852|Cycle_0|Type_1	31,28	40854675,40872326	psi1:0.71875,psi2:1.0	C1_23,C2_9	C1_9,C2_0	Yes
ENSG00000110514	MADD	chr11:47306586-47307031	+	altD	129	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	159,30	47306745,47307002	No	No	No	bcc_54680|Cycle_0|Type_1	30,30	47306616,47307002	psi1:0.473684210526,psi2:0	C1_9,C2_0	C1_10,C2_2	Yes
ENSG00000205726	ITSN1	chr21:35172204-35183308	+	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,15,30	35172233,35174734,35174748,35183279	No	No	No	bcc_45430|Cycle_0|Type_1	29,30	35172233,35183279	psi1:0.473684210526,psi2:0	C1_9,C2_0	C1_10,C2_2	Yes
ENSG00000167721	TSR1	chr17:2238159-2238632	-	altD	48	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,79	2238190,2238554	No	No	No	bcc_27107|Cycle_0|Type_1	31,31	2238190,2238602	psi1:1.0,psi2:0.833333333333	C1_9,C2_10	C1_0,C2_2	Yes
ENSG00000075303	SLC25A40	chr7:87485639-87487976	-	altA	38	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	65,31	87485704,87487946	No	No	No	bcc_21344|Cycle_0|Type_1	27,31	87485666,87487946	psi1:0.3,psi2:0	C1_6,C2_0	C1_14,C2_5	Yes
ENSG00000058799	YIPF1	chr1:54354628-54355415	-	ES	220	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,220,30	54354659,54354917,54355136,54355386	No	No	No	bcc_50690|Cycle_0|Type_1	31,30	54354659,54355386	psi1:1.0,psi2:0.809523809524	C1_12,C2_17	C1_0,C2_4	Yes
ENSG00000063245	EPN1	chr19:56186770-56189921	+	ES	173	Yes	Yes	protein_coding	3_ss_annotated_(over_4_ss):56188584,56186801,56189893	31,173,29	56186801,56188412,56188584,56189893	No	Yes	No	bcc_58663|Cycle_1|Type_1	31,29	56186801,56189893	psi1:0,psi2:0.511111111111	C1_0,C2_23	C1_4,C2_22	Yes
ENSG00000089022	MAPKAPK5	chr12:112305442-112308103	+	ES	109	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,109,29	112305473,112306557,112306665,112308075	No	No	No	bcc_50713|Cycle_0|Type_1	31,29	112305473,112308075	psi1:0.692307692308,psi2:0.916666666667	C1_9,C2_11	C1_4,C2_1	(GC:112306665,AG:112308075);(GT:112305473,AG:112308075);(GT:112305473,AG:112306557)
ENSG00000163702	IL17RC	chr3:9970283-9971563	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,31	9970314,9971533	No	No	No	bcc_23658|Cycle_0|Type_1	31,28	9970314,9971536	psi1:0.5,psi2:0.12	C1_1,C2_3	C1_1,C2_22	Yes
ENSG00000145216	FIP1L1	chr4:54257275-54265932	+	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):54265897,54257306	31,36	54257306,54265897	No	Yes	No	bcc_13982|Cycle_3|Type_1	31,30	54257306,54265903	psi1:0.625,psi2:0.866666666667	C1_5,C2_13	C1_3,C2_2	Yes
ENSG00000177697	CD151	chr11:832997-836092	+	ES	62	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	29,62,30	833026,834530,834591,836063	No	No	No	bcc_61490|Cycle_0|Type_1	29,30	833026,836063	psi1:1.0,psi2:0.56	C1_3,C2_14	C1_0,C2_11	Yes
ENSG00000162627	SNX7	chr1:99167428-99225639	+	ES	153	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,153,30	99167459,99203793,99203945,99225610	No	No	No	bcc_40780|Cycle_4|Type_1	31,30	99167459,99225610	psi1:0.982142857143,psi2:0.833333333333	C1_55,C2_25	C1_1,C2_5	Yes
ENSG00000129071	MBD4	chr3:129152949-129155334	-	altD	18	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,49	129152979,129155286	No	No	No	bcc_13295|Cycle_0|Type_1	30,31	129152979,129155304	psi1:0.181818181818,psi2:0.4375	C1_4,C2_7	C1_18,C2_9	Yes
ENSG00000132361	CLUH	chr17:2599801-2600043	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	2599832,2600013	No	No	No	bcc_51065|Cycle_0|Type_1	28,31	2599829,2600013	psi1:0.5,psi2:0.8	C1_2,C2_12	C1_2,C2_3	Yes
ENSG00000055609	KMT2C	chr7:151841937-151842279	-	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,42	151841966,151842238	No	No	No	bcc_7236|Cycle_0|Type_1	29,30	151841966,151842250	psi1:0.538461538462,psi2:0	C1_7,C2_0	C1_6,C2_1	Yes
ENSG00000086827	ZW10	chr11:113607466-113608324	-	altA	49	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	78,31	113607544,113608294	No	No	No	bcc_67172|Cycle_0|Type_1	29,31	113607495,113608294	psi1:1.0,psi2:0.857142857143	C1_14,C2_12	C1_0,C2_2	Yes
ENSG00000082805	ERC1	chr12:1299187-1345962	+	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,12,28	1299218,1313667,1313678,1345935	No	No	No	bcc_61472|Cycle_0|Type_1	31,28	1299218,1345935	psi1:0.538461538462,psi2:0	C1_7,C2_0	C1_6,C2_1	Yes
-	unknown_gene	chr8:12053716-12060018	0	ES	93	No	-	-	no_ss	31,93,28	12053747,12056213,12056305,12059991	Yes	No	No	bcc_591|Cycle_0|Type_1	31,28	12053747,12059991	psi1:0.666666666667,psi2:1.0	C1_10,C2_3	C1_5,C2_0	-
-	unknown_gene	chr8:12295989-12302292	0	ES	93	No	-	-	no_ss	31,93,28	12296020,12298478,12298570,12302265	Yes	No	No	bcc_591|Cycle_0|Type_1	31,28	12296020,12302265	psi1:0.666666666667,psi2:1.0	C1_10,C2_3	C1_5,C2_0	-
ENSG00000139631	CSAD	chr12:53554597-53555086	-	ES	65	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,65,30	53554628,53554911,53554975,53555057	No	No	No	bcc_27517|Cycle_0|Type_1	31,30	53554628,53555057	psi1:1.0,psi2:0.461538461538	C1_2,C2_12	C1_0,C2_14	Yes
ENSG00000092421	SEMA6A	chr5:115803415-115811250	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	28,51,21,10	115803443,115808581,115808631,115808769,115808789,115811241	No	Yes	No	bcc_42955|Cycle_3|Type_1	28,21,10	115803443,115808769,115808789,115811241	psi1:0.529411764706,psi2:0.125	C1_27,C2_1	C1_24,C2_7	Yes
ENSG00000119820	YIPF4	chr2:32517388-32526481	+	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,78,31	32517417,32523303,32523380,32526451	No	No	No	bcc_38678|Cycle_0|Type_1	29,31	32517417,32526451	psi1:0.833333333333,psi2:0.981818181818	C1_25,C2_54	C1_5,C2_1	Yes
ENSG00000249240,ENSG00000241839	AC069368.3,PLEKHO2	chr15:65152168-65157125	+	ES	99	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	29,99,28	65152197,65153676,65153774,65157098	No	No	No	bcc_55572|Cycle_0|Type_1	29,28	65152197,65157098	psi1:0.8125,psi2:1.0	C1_13,C2_9	C1_3,C2_0	Yes
ENSG00000164253	WDR41	chr5:76732193-76734094	-	ES	89	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	26,89,30	76732219,76733161,76733249,76734065	No	No	No	bcc_28467|Cycle_4|Type_1	26,30	76732219,76734065	psi1:1.0,psi2:0.882352941176	C1_28,C2_15	C1_0,C2_2	Yes
ENSG00000102103	PQBP1	chrX:48759288-48760038	+	ES	285	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,285,30	48759319,48759510,48759794,48760009	No	Yes	No	bcc_55569|Cycle_3|Type_1	31,30	48759319,48760009	psi1:0.863636363636,psi2:1.0	C1_57,C2_73	C1_9,C2_0	Yes
ENSG00000239697,ENSG00000248871,ENSG00000161955	TNFSF12,TNFSF12-TNFSF13,TNFSF13	chr17:7462989-7463396	+	ES	48	No	Yes	protein_coding,protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,48,31	7463019,7463163,7463210,7463366	No	No	No	bcc_68869|Cycle_0|Type_1	30,31	7463019,7463366	psi1:0.65625,psi2:1.0	C1_21,C2_6	C1_11,C2_0	Yes
ENSG00000149743	TRPT1	chr11:63991655-63991787	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):63991682,63991757	30,31	63991685,63991757	No	No	No	bcc_71185|Cycle_0|Type_1	27,31	63991682,63991757	psi1:0.230769230769,psi2:0.047619047619	C1_3,C2_1	C1_10,C2_20	Yes
ENSG00000182087	TMEM259	chr19:1011581-1011770	-	altA	51	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	81,31	1011662,1011740	No	No	No	bcc_59699|Cycle_0|Type_1	30,31	1011611,1011740	psi1:0.675,psi2:0.916666666667	C1_27,C2_22	C1_13,C2_2	Yes
ENSG00000073417	PDE8A	chr15:85626844-85643275	+	ES_MULTI	168	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,79,89,30	85626875,85632569,85632647,85641179,85641267,85643246	No	Yes	No	bcc_32243|Cycle_3|Type_1	31,30	85626875,85643246	psi1:0.818181818182,psi2:1.0	C1_18,C2_13	C1_4,C2_0	Yes
ENSG00000115762	PLEKHB2	chr2:131890533-131897771	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	131890564,131897740	No	No	No	bcc_20282|Cycle_0|Type_1	31,29	131890564,131897743	psi1:0.818181818182,psi2:1.0	C1_18,C2_13	C1_4,C2_0	Yes
ENSG00000105223	PLD3	chr19:40854644-40872355	+	ES	378	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,378,30	40854675,40871460,40871837,40872326	No	Yes	No	bcc_13852|Cycle_4|Type_1	31,30	40854675,40872326	psi1:0.846153846154,psi2:1.0	C1_55,C2_54	C1_10,C2_0	Yes
ENSG00000114867	EIF4G1	chr3:184040998-184041225	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	184041029,184041193	No	No	No	bcc_7017|Cycle_0|Type_1	31,30	184041029,184041196	psi1:0.714285714286,psi2:0.352941176471	C1_5,C2_12	C1_2,C2_22	Yes
ENSG00000172590	MRPL52	chr14:23299433-23303410	+	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,72,30	23299463,23302627,23302698,23303381	No	Yes	No	bcc_66011|Cycle_0|Type_1	30,30	23299463,23303381	psi1:1.0,psi2:0.745098039216	C1_16,C2_38	C1_0,C2_13	Yes
ENSG00000140650	PMM2	chr16:8895736-8904965	+	ES_MULTI	169	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,77,92,30	8895767,8898624,8898700,8900173,8900264,8904936	No	No	No	bcc_51700|Cycle_0|Type_1	31,30	8895767,8904936	psi1:0.896551724138,psi2:1.0	C1_26,C2_69	C1_3,C2_0	Yes
ENSG00000164068	RNF123	chr3:49758507-49758648	-	IR	79	Yes	Yes	protein_coding	no_known_ss	141	-	No	No	No	bcc_16823|Cycle_0|Type_1	31,31	49758538,49758618	psi1:0.8,psi2:0.413793103448	C1_8,C2_24	C1_2,C2_34	(AG:49758618,GT:49758538)
ENSG00000151150	ANK3	chr10:61819157-61822896	-	ES	309	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,309,28	61819188,61819456,61819764,61822869	No	No	No	bcc_17100|Cycle_1|Type_1	31,28	61819188,61822869	psi1:0.686274509804,psi2:1.0	C1_70,C2_22	C1_32,C2_0	Yes
ENSG00000166181	API5	chr11:43345155-43349369	+	ES	105	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,105,31	43345186,43348057,43348161,43349339	No	No	No	bcc_8829|Cycle_0|Type_1	31,31	43345186,43349339	psi1:1.0,psi2:0.888888888889	C1_66,C2_32	C1_0,C2_4	Yes
ENSG00000129559	NEDD8	chr14:24687608-24701486	-	ES	86	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,86,31	24687637,24700858,24700943,24701456	No	No	No	bcc_59045|Cycle_0|Type_1	29,31	24687637,24701456	psi1:0.0357142857143,psi2:0.205479452055	C1_4,C2_15	C1_108,C2_58	Yes
ENSG00000164163	ABCE1	chr4:146019541-146025569	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	30,32	146019571,146025538	No	No	No	bcc_40403|Cycle_0|Type_1	30,29	146019571,146025541	psi1:0.733333333333,psi2:0.931034482759	C1_11,C2_27	C1_4,C2_2	Yes
ENSG00000182628	SKA2	chr17:57189678-57208672	-	ES	177	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,177,31	57189706,57196680,57196856,57208642	No	Yes	No	bcc_27646|Cycle_1|Type_1	28,31	57189706,57208642	psi1:0.965517241379,psi2:0.8	C1_56,C2_24	C1_2,C2_6	Yes
ENSG00000135678	CPM	chr12:69265707-69326488	-	ES	98	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,98,31	69265736,69279572,69279669,69326458	No	No	No	bcc_9906|Cycle_0|Type_1	29,31	69265736,69326458	psi1:0.848484848485,psi2:1.0	C1_28,C2_27	C1_5,C2_0	Yes
ENSG00000142864	SERBP1	chr1:67889929-67890601	-	altA	45	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	76,31	67890005,67890571	No	No	No	bcc_34577|Cycle_0|Type_1	31,31	67889960,67890571	psi1:0.615384615385,psi2:0.343023255814	C1_104,C2_59	C1_65,C2_113	Yes
ENSG00000141644	MBD1	chr18:47799768-47799963	-	altA	45	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	73,30	47799841,47799934	No	No	No	bcc_52001|Cycle_0|Type_1	28,30	47799796,47799934	psi1:1.0,psi2:0.684210526316	C1_4,C2_13	C1_0,C2_6	Yes
ENSG00000204348	DXO	chr6:31937917-31938169	-	altAD	57	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):31938120,31937980	63,50	31937980,31938120	No	Yes	No	bcc_66948|Cycle_0|Type_1	25,31	31937942,31938139	psi1:0.857142857143,psi2:1.0	C1_12,C2_13	C1_2,C2_0	(AC:31938120,CT:31937980);(TC:31938139,TT:31937942)
ENSG00000213204,ENSG00000164414	C6orf165,SLC35A1	chr6:88216135-88218789	+	ES	177	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,177,31	88216166,88218138,88218314,88218759	No	No	No	bcc_44268|Cycle_0|Type_1	31,31	88216166,88218759	psi1:0.9,psi2:1.0	C1_9,C2_26	C1_1,C2_0	Yes
ENSG00000100031	GGT1	chr22:25006467-25007074	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,33	25006498,25007042	Yes	No	No	bcc_22620|Cycle_0|Type_1	31,30	25006498,25007045	psi1:0.5,psi2:0.818181818182	C1_1,C2_9	C1_1,C2_2	Yes
ENSG00000174720	LARP7	chr4:113565893-113567537	+	altD	103	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	134,31	113566027,113567507	No	No	No	bcc_28272|Cycle_0|Type_1	31,31	113565924,113567507	psi1:1.0,psi2:0.875	C1_51,C2_35	C1_0,C2_5	Yes
ENSG00000153214	TMEM87B	chr2:112832504-112834798	+	altAD	3	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):112834769,112832539	35,30	112832539,112834769	No	No	No	bcc_53392|Cycle_0|Type_1	31,31	112832535,112834768	psi1:1.0,psi2:0.555555555556	C1_1,C2_5	C1_0,C2_4	(GT:112832539,AG:112834769);(AA:112832535,CA:112834768)
ENSG00000109458	GAB1	chr4:144361504-144380567	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,30	144361535,144378833,144378922,144380538	No	No	No	bcc_49591|Cycle_0|Type_1	31,30	144361535,144380538	psi1:0.555555555556,psi2:1.0	C1_10,C2_2	C1_8,C2_0	Yes
ENSG00000175826	CTDNEP1	chr17:7147240-7147538	+	IR	237	No	Yes	protein_coding	no_known_ss	298	-	No	Yes	No	bcc_40628|Cycle_4|Type_1	30,31	7147270,7147508	psi1:1.0,psi2:0.851851851852	C1_46,C2_46	C1_0,C2_8	(CT:7147270,AC:7147508)
ENSG00000131503,ENSG00000254996	ANKHD1,ANKHD1-EIF4EBP3	chr5:139909351-139916953	+	ES	177	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,177,31	139909381,139914947,139915123,139916923	No	No	No	bcc_38273|Cycle_0|Type_1	30,31	139909381,139916923	psi1:1.0,psi2:0.833333333333	C1_16,C2_20	C1_0,C2_4	Yes
ENSG00000162613	FUBP1	chr1:78432753-78433341	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	78432785,78433311	No	No	No	bcc_26061|Cycle_0|Type_1	29,31	78432782,78433311	psi1:0.466666666667,psi2:0.2	C1_7,C2_2	C1_8,C2_8	Yes
ENSG00000254634,ENSG00000261740	RP11-231C14.3,RP11-345J4.5	chr16:29458215-29465367	-	altA	104	Yes	Yes	pseudogene,protein_coding	all_splice_sites_known_(3_ss)	132,31	29458347,29465337	No	No	No	bcc_34713|Cycle_1|Type_1	28,31	29458243,29465337	psi1:0.888888888889,psi2:0.666666666667	C1_40,C2_18	C1_5,C2_9	Yes
ENSG00000165795	NDRG2	chr14:21491449-21493866	-	ES	67	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,67,31	21491480,21492189,21492255,21493836	No	Yes	No	bcc_46697|Cycle_1|Type_1	31,31	21491480,21493836	psi1:0.583850931677,psi2:0.961538461538	C1_94,C2_25	C1_67,C2_1	Yes
ENSG00000147010	SH3KBP1	chrX:19560280-19568122	-	ES	129	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,129,31	19560311,19564040,19564168,19568092	No	No	No	bcc_32665|Cycle_0|Type_1	31,31	19560311,19568092	psi1:0.826086956522,psi2:1.0	C1_19,C2_14	C1_4,C2_0	Yes
ENSG00000129484	PARP2	chr14:20825278-20825827	+	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,125,31	20825308,20825555,20825679,20825797	No	No	No	bcc_31746|Cycle_1|Type_1	30,31	20825308,20825797	psi1:0.8,psi2:1.0	C1_24,C2_14	C1_6,C2_0	Yes
ENSG00000070159	PTPN3	chr9:112182849-112189259	-	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,135,30	112182880,112184998,112185132,112189230	No	No	No	bcc_61025|Cycle_0|Type_1	31,30	112182880,112189230	psi1:0.333333333333,psi2:0.75	C1_1,C2_21	C1_2,C2_7	Yes
ENSG00000172062	SMN1	chr5:70241973-70248296	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,54,31	70242003,70247768,70247821,70248266	No	No	No	bcc_50316|Cycle_0|Type_1	30,31	70242003,70248266	psi1:0.617647058824,psi2:0.864583333333	C1_21,C2_83	C1_13,C2_13	Yes
ENSG00000127952	STYXL1	chr7:75630243-75633106	-	altAD	47	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):75630320,75633076	77,31	75630320,75633076	No	Yes	No	bcc_50810|Cycle_4|Type_1	29,32	75630272,75633075	psi1:0,psi2:0.551724137931	C1_0,C2_16	C1_2,C2_13	(AC:75633076,CT:75630320);(TA:75633075,CT:75630272)
ENSG00000088038	CNOT3	chr19:54648037-54649364	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	54648068,54649331	No	No	No	bcc_57816|Cycle_0|Type_1	31,31	54648068,54649334	psi1:0.153846153846,psi2:0	C1_2,C2_0	C1_11,C2_10	Yes
ENSG00000144228	SPOPL	chr2:139308143-139308573	+	altA	71	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,101	139308174,139308473	No	No	No	bcc_59388|Cycle_0|Type_1	31,30	139308174,139308544	psi1:0.652173913043,psi2:1.0	C1_15,C2_4	C1_8,C2_0	Yes
ENSG00000105223	PLD3	chr19:40854644-40872353	+	ES_altA	413	Yes	-	protein_coding	all_splice_sites_known_(5_ss)	31,378,63	40854675,40871460,40871837,40872291	No	Yes	No	bcc_13852|Cycle_1|Type_1	31,28	40854675,40872326	psi1:0.847457627119,psi2:1.0	C1_50,C2_46	C1_9,C2_0	Yes
ENSG00000114383	TUSC2	chr3:50363588-50363845	-	altD	28	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,58	50363617,50363788	No	No	No	bcc_39208|Cycle_0|Type_1	29,30	50363617,50363816	psi1:0.885714285714,psi2:1.0	C1_31,C2_55	C1_4,C2_0	(AC:50363788,CT:50363617);(GC:50363816,CT:50363617)
ENSG00000070159	PTPN3	chr9:112211106-112219482	-	ES	79	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,79,30	112211135,112216776,112216854,112219453	No	No	No	bcc_61024|Cycle_0|Type_1	29,30	112211135,112219453	psi1:0.5,psi2:0.863636363636	C1_1,C2_19	C1_1,C2_3	Yes
ENSG00000128512	DOCK4	chr7:111372313-111377001	-	ES	114	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,114,29	111372343,111375110,111375223,111376973	No	No	No	bcc_54403|Cycle_0|Type_1	30,29	111372343,111376973	psi1:0.695652173913,psi2:1.0	C1_16,C2_5	C1_7,C2_0	Yes
ENSG00000113163	COL4A3BP	chr5:74685483-74696060	-	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,78,31	74685512,74695135,74695212,74696030	No	No	No	bcc_31323|Cycle_0|Type_1	29,31	74685512,74696030	psi1:0.652173913043,psi2:0	C1_15,C2_0	C1_8,C2_1	Yes
ENSG00000092841	MYL6	chr12:56554073-56555200	+	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,30	56554104,56554410,56554454,56555171	No	No	No	bcc_59365|Cycle_0|Type_1	31,30	56554104,56555171	psi1:0.756097560976,psi2:0.492125984252	C1_310,C2_250	C1_100,C2_258	Yes
ENSG00000165060	FXN	chr9:71679920-71687556	+	altD	8	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	39,29	71679959,71687528	No	No	No	bcc_40301|Cycle_0|Type_1	31,29	71679951,71687528	psi1:0.333333333333,psi2:0.0909090909091	C1_3,C2_4	C1_6,C2_40	Yes
ENSG00000075711	DLG1	chr3:196793594-196796120	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,36,31	196793625,196795373,196795408,196796090	No	Yes	No	bcc_42915|Cycle_3|Type_1	31,31	196793625,196796090	psi1:0.292682926829,psi2:0	C1_24,C2_0	C1_58,C2_19	Yes
ENSG00000203667	COX20	chr1:244999027-245005527	+	ES	115	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,115,31	244999058,245005246,245005360,245005497	No	No	No	bcc_28349|Cycle_0|Type_1	31,31	244999058,245005497	psi1:0.693333333333,psi2:0.939393939394	C1_52,C2_31	C1_23,C2_2	Yes
ENSG00000099968	BCL2L13	chr22:18138567-18166008	+	ES	115	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):18165980,18138598	31,115,29	18138598,18145665,18145779,18165980	No	No	No	bcc_47563|Cycle_0|Type_1	31,29	18138598,18165980	psi1:0.2,psi2:0.56	C1_1,C2_14	C1_4,C2_11	Yes
ENSG00000071626	DAZAP1	chr19:1418699-1421179	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	1418730,1421147	No	No	No	bcc_50253|Cycle_0|Type_1	31,30	1418730,1421150	psi1:0.714285714286,psi2:0.916666666667	C1_10,C2_22	C1_4,C2_2	Yes
ENSG00000213593	TMX2	chr11:57505110-57505415	+	altA	77	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,108	57505140,57505308	No	Yes	No	bcc_51983|Cycle_3|Type_1	30,31	57505140,57505385	psi1:0.224489795918,psi2:0.0375	C1_22,C2_3	C1_76,C2_77	Yes
ENSG00000135047	CTSL	chr9:90341135-90342539	+	altD	59	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):90342509,90341223	88,31	90341223,90342509	No	Yes	No	bcc_52159|Cycle_2|Type_1	29,31	90341164,90342509	psi1:0.8,psi2:0.5	C1_4,C2_7	C1_1,C2_7	Yes
ENSG00000166816	LDHD	chr16:75148033-75148454	-	altA	69	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	99,31	75148132,75148424	No	No	No	bcc_66908|Cycle_0|Type_1	30,31	75148063,75148424	psi1:0,psi2:0.5	C1_0,C2_6	C1_1,C2_6	Yes
ENSG00000204394	VARS	chr6:31760049-31760199	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):31760078,31760169	32,31	31760081,31760169	No	No	No	bcc_53189|Cycle_0|Type_1	29,31	31760078,31760169	psi1:0,psi2:0.142857142857	C1_0,C2_2	C1_12,C2_12	Yes
ENSG00000035928	RFC1	chr4:39322965-39328213	-	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,78,31	39322994,39324960,39325037,39328183	No	No	No	bcc_47989|Cycle_0|Type_1	29,31	39322994,39328183	psi1:0.75,psi2:1.0	C1_15,C2_6	C1_5,C2_0	Yes
ENSG00000182013	PNMAL1	chr19:46971214-46971278	-	deletion	6	No	-	protein_coding	no_known_ss	64	46971214	No	No	No	bcc_11184|Cycle_0|Type_1	27,31	46971241,46971248	psi1:0.535714285714,psi2:0	C1_15,C2_0	C1_13,C2_2	-
ENSG00000126351	THRA	chr17:38245556-38249418	+	altA	117	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,146	38245586,38249273	No	No	No	bcc_47222|Cycle_0|Type_1	30,29	38245586,38249390	psi1:0.973214285714,psi2:0.666666666667	C1_109,C2_2	C1_3,C2_1	Yes
ENSG00000239779	WBP1	chr2:74685768-74686799	+	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,75,30	74685798,74686605,74686679,74686770	Yes	Yes	No	bcc_63203|Cycle_4|Type_1	30,30	74685798,74686770	psi1:0.571428571429,psi2:0.2	C1_16,C2_1	C1_12,C2_4	Yes
ENSG00000257267	ZNF271	chr18:32870324-32885968	+	ES	223	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	31,223,29	32870355,32870974,32871196,32885940	No	No	No	bcc_8606|Cycle_0|Type_1	31,29	32870355,32885940	psi1:0.8,psi2:0.963636363636	C1_28,C2_53	C1_7,C2_2	Yes
ENSG00000010361	FUZ	chr19:50315562-50315925	-	altD	23	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,54	50315592,50315872	No	No	No	bcc_71169|Cycle_0|Type_1	30,31	50315592,50315895	psi1:0.636363636364,psi2:0	C1_14,C2_0	C1_8,C2_1	Yes
ENSG00000129197	RPAIN	chr17:5326118-5331421	+	ES_MULTI	176	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,112,64,31	5326149,5329291,5329402,5329556,5329619,5331391	No	Yes	No	bcc_37873|Cycle_3|Type_1	31,31	5326149,5331391	psi1:0.909090909091,psi2:1.0	C1_10,C2_35	C1_1,C2_0	Yes
ENSG00000176623	RMDN1	chr8:87492532-87498743	-	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,90,31	87492561,87497101,87497190,87498713	No	No	No	bcc_12726|Cycle_1|Type_1	29,31	87492561,87498713	psi1:1.0,psi2:0.851851851852	C1_21,C2_23	C1_0,C2_4	Yes
ENSG00000138434	SSFA2	chr2:182785348-182786705	+	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	41,31	182785389,182786675	No	Yes	No	bcc_39372|Cycle_2|Type_1	29,31	182785377,182786675	psi1:0.928571428571,psi2:0.651162790698	C1_13,C2_28	C1_1,C2_15	Yes
ENSG00000138326	RPS24	chr10:79797031-79800379	+	ES	18	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,18,22,7	79797062,79797723,79797740,79799962,79799983,79800373	No	Yes	No	bcc_24161|Cycle_9|Type_1	31,22,7	79797062,79799962,79799983,79800373	psi1:0.187664041995,psi2:0	C1_143,C2_0	C1_619,C2_373	Yes
ENSG00000023191	RNH1	chr11:502153-504854	-	altA	68	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	96,31	502249,504824	No	Yes	No	bcc_58209|Cycle_0|Type_1	28,31	502181,504824	psi1:0.5,psi2:0.769230769231	C1_11,C2_10	C1_11,C2_3	Yes
ENSG00000118418	HMGN3	chr6:79911414-79912063	-	altD	41	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,71	79911443,79911993	No	Yes	No	bcc_33987|Cycle_15|Type_1	29,30	79911443,79912034	psi1:0.706896551724,psi2:0.435483870968	C1_82,C2_27	C1_34,C2_35	Yes
ENSG00000084234	APLP2	chr11:129992377-129996625	+	ES	168	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,168,31	129992408,129993507,129993674,129996595	No	No	No	bcc_29585|Cycle_0|Type_1	31,31	129992408,129996595	psi1:0.9,psi2:0.687830687831	C1_360,C2_130	C1_40,C2_59	Yes
ENSG00000130396	MLLT4	chr6:168271147-168272924	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	168271178,168272894	No	No	No	bcc_44910|Cycle_0|Type_1	31,28	168271178,168272897	psi1:0.72,psi2:1.0	C1_18,C2_6	C1_7,C2_0	Yes
ENSG00000146457	WTAP	chr6:160169370-160169650	+	IR	220	Yes	Yes	protein_coding	no_known_ss	280	-	No	No	No	bcc_3832|Cycle_0|Type_1	31,29	160169401,160169622	psi1:1.0,psi2:0.896551724138	C1_54,C2_26	C1_0,C2_3	Yes
ENSG00000119139	TJP2	chr9:71863109-71867760	+	ES	330	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,330,30	71863140,71865951,71866280,71867731	No	Yes	No	bcc_43562|Cycle_1|Type_1	31,30	71863140,71867731	psi1:0.822368421053,psi2:0.984251968504	C1_125,C2_125	C1_27,C2_2	Yes
ENSG00000169062	UPF3A	chr13:115057224-115064345	+	altD	12	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):115057267,115064315	43,31	115057267,115064315	Yes	No	No	bcc_35701|Cycle_0|Type_1	31,31	115057255,115064315	psi1:1.0,psi2:0.904761904762	C1_52,C2_19	C1_0,C2_2	Yes
ENSG00000127314	RAP1B	chr12:69004794-69042509	+	altD	9	No	-	protein_coding	all_splice_sites_known_(3_ss)	38,31	69004832,69042479	No	No	No	bcc_27892|Cycle_0|Type_1	29,31	69004823,69042479	psi1:0.31914893617,psi2:0.666666666667	C1_15,C2_6	C1_32,C2_3	Yes
ENSG00000095787	WAC	chr10:28903583-28905133	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):28905102,28903614	31,32	28903614,28905102	No	No	No	bcc_22832|Cycle_0|Type_1	31,29	28903614,28905105	psi1:0.840909090909,psi2:0.6	C1_37,C2_12	C1_7,C2_8	Yes
ENSG00000167930	ITFG3	chr16:309567-310023	+	altA	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,56	309598,309968	No	No	No	bcc_35219|Cycle_0|Type_1	31,29	309598,309995	psi1:0.590909090909,psi2:0.833333333333	C1_13,C2_15	C1_9,C2_3	Yes
ENSG00000168610	STAT3	chr17:40500507-40540327	-	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,31	40500538,40540297	No	Yes	No	bcc_8718|Cycle_0|Type_1	28,31	40500535,40540297	psi1:0,psi2:0.45	C1_0,C2_9	C1_2,C2_11	Yes
ENSG00000164167	LSM6	chr4:147096932-147104092	+	altAD	6	No	-	protein_coding	2_ss_annotated_(over_4_ss):147104064,147096963	30,36	147096962,147104057	No	No	No	bcc_14552|Cycle_0|Type_1	31,29	147096963,147104064	psi1:0.153846153846,psi2:0	C1_2,C2_0	C1_11,C2_9	(GT:147096963,AG:147104064);(GG:147096962,TT:147104057)
ENSG00000105854	PON2	chr7:95041758-95045583	-	altD	70	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,100	95041789,95045484	No	No	No	bcc_41718|Cycle_0|Type_1	31,30	95041789,95045554	psi1:0.320987654321,psi2:0.10752688172	C1_26,C2_10	C1_55,C2_83	Yes
ENSG00000083642	PDS5B	chr13:33338695-33344289	+	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	37,31	33338732,33344259	No	No	No	bcc_30624|Cycle_0|Type_1	31,31	33338726,33344259	psi1:0.535714285714,psi2:0.857142857143	C1_15,C2_6	C1_13,C2_1	Yes
ENSG00000096746	HNRNPH3	chr10:70091942-70096984	+	altD	19	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	50,29	70091992,70096956	No	No	No	bcc_11920|Cycle_1|Type_1	31,29	70091973,70096956	psi1:0.380952380952,psi2:0.666666666667	C1_8,C2_6	C1_13,C2_3	Yes
ENSG00000172590	MRPL52	chr14:23299118-23299292	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	23299149,23299259	No	No	No	bcc_66010|Cycle_0|Type_1	31,31	23299149,23299262	psi1:0,psi2:0.619047619048	C1_0,C2_13	C1_1,C2_8	Yes
ENSG00000090661	CERS4	chr19:8321563-8321923	+	altA	62	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):8321833,8321594	31,91	8321594,8321833	No	No	No	bcc_16668|Cycle_0|Type_1	31,29	8321594,8321895	psi1:0.888888888889,psi2:1.0	C1_32,C2_52	C1_4,C2_0	Yes
ENSG00000015171	ZMYND11	chr10:255957-282808	+	ES	162	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,162,31	255988,267135,267296,282778	No	No	No	bcc_36022|Cycle_0|Type_1	31,31	255988,282778	psi1:0.683168316832,psi2:0.942857142857	C1_69,C2_33	C1_32,C2_2	Yes
ENSG00000006114	SYNRG	chr17:35900553-35902104	-	altA	63	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	92,31	35900645,35902074	No	No	No	bcc_37209|Cycle_0|Type_1	29,31	35900582,35902074	psi1:0.833333333333,psi2:1.0	C1_10,C2_7	C1_2,C2_0	Yes
ENSG00000100991	TRPC4AP	chr20:33609106-33622956	-	altA	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	53,31	33609159,33622926	No	No	No	bcc_50109|Cycle_0|Type_1	29,31	33609135,33622926	psi1:0.45,psi2:0.714285714286	C1_9,C2_10	C1_11,C2_4	Yes
ENSG00000183011	LSMD1	chr17:7760131-7760363	-	altD	30	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,61	7760161,7760303	No	No	No	bcc_60787|Cycle_0|Type_1	30,31	7760161,7760333	psi1:0.4,psi2:0.163636363636	C1_12,C2_9	C1_18,C2_46	Yes
ENSG00000004534	RBM6	chr3:50012795-50085705	+	ES	74	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,74,28	50012825,50036873,50036946,50085678	No	No	No	bcc_21253|Cycle_20|Type_1	30,28	50012825,50085678	psi1:0.6875,psi2:0.909090909091	C1_11,C2_10	C1_5,C2_1	Yes
ENSG00000135525	MAP7	chr6:136698977-136709561	-	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,111,31	136699006,136704809,136704919,136709531	No	No	No	bcc_17338|Cycle_1|Type_1	29,31	136699006,136709531	psi1:0.883333333333,psi2:0.647058823529	C1_53,C2_11	C1_7,C2_6	Yes
ENSG00000084072	PPIE	chr1:40209565-40214603	+	ES	85	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,85,29	40209596,40211086,40211170,40214575	No	Yes	No	bcc_17553|Cycle_1|Type_1	31,29	40209596,40214575	psi1:0.857142857143,psi2:1.0	C1_12,C2_11	C1_2,C2_0	Yes
ENSG00000145388	METTL14	chr4:119625176-119631181	+	ES	211	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,211,29	119625206,119626766,119626976,119631153	No	No	No	bcc_30928|Cycle_0|Type_1	30,29	119625206,119631153	psi1:0.863636363636,psi2:1.0	C1_19,C2_19	C1_3,C2_0	Yes
ENSG00000117143	UAP1	chr1:162560271-162567612	+	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,51,31	162560301,162562522,162562572,162567582	No	Yes	No	bcc_4305|Cycle_1|Type_1	30,31	162560301,162567582	psi1:0.6,psi2:0.913385826772	C1_6,C2_116	C1_4,C2_11	Yes
ENSG00000138593	SECISBP2L	chr15:49309796-49319591	-	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,135,30	49309825,49311615,49311749,49319562	No	No	No	bcc_29551|Cycle_1|Type_1	29,30	49309825,49319562	psi1:0.918918918919,psi2:0.5	C1_102,C2_2	C1_9,C2_2	Yes
ENSG00000075711	DLG1	chr3:196796100-196803487	-	ES	34	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,34,31	196796131,196802708,196802741,196803457	No	Yes	No	bcc_42915|Cycle_0|Type_1	31,31	196796131,196803457	psi1:0.393939393939,psi2:0.133333333333	C1_13,C2_2	C1_20,C2_13	Yes
ENSG00000179364	PACS2	chr14:105834821-105836208	+	altD	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	55,31	105834876,105836178	No	No	No	bcc_71681|Cycle_0|Type_1	31,31	105834852,105836178	psi1:0.965517241379,psi2:0.666666666667	C1_84,C2_2	C1_3,C2_1	Yes
ENSG00000166199	ALKBH3	chr11:43911347-43923096	+	ES	89	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,89,31	43911378,43913591,43913679,43923066	No	No	No	bcc_49481|Cycle_0|Type_1	31,31	43911378,43923066	psi1:0.868421052632,psi2:1.0	C1_33,C2_35	C1_5,C2_0	Yes
ENSG00000013561	RNF14	chr5:141353276-141362974	+	ES_MULTI	909	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,152,528,229,30	141353307,141354369,141354520,141357868,141358395,141359688,141359916,141362945	No	Yes	No	bcc_50866|Cycle_12|Type_1	31,30	141353307,141362945	psi1:0.890625,psi2:1.0	C1_114,C2_185	C1_14,C2_0	Yes
ENSG00000117640	MTFR1L	chr1:26153286-26156137	+	altA	109	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,138	26153317,26156000	No	No	No	bcc_39752|Cycle_0|Type_1	31,29	26153317,26156109	psi1:0.730769230769,psi2:0.925925925926	C1_19,C2_25	C1_7,C2_2	Yes
ENSG00000013561	RNF14	chr5:141354489-141359714	+	ES	528	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,528,27	141354520,141357868,141358395,141359688	No	Yes	No	bcc_50866|Cycle_1|Type_1	31,27	141354520,141359688	psi1:0.850746268657,psi2:0.983333333333	C1_57,C2_118	C1_10,C2_2	Yes
ENSG00000166946	CCNDBP1	chr15:43481447-43482552	+	ES	97	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,97,30	43481478,43482253,43482349,43482523	No	No	No	bcc_52431|Cycle_0|Type_1	31,30	43481478,43482523	psi1:0.790697674419,psi2:0.96875	C1_34,C2_31	C1_9,C2_1	Yes
ENSG00000204472	AIF1	chr6:31583040-31583327	+	altD	61	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	91,30	31583131,31583298	No	No	No	bcc_53498|Cycle_0|Type_1	30,30	31583070,31583298	psi1:0.48275862069,psi2:0.75	C1_14,C2_12	C1_15,C2_4	Yes
ENSG00000144029	MRPS5	chr2:95772173-95774029	-	altD	79	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):95773920,95772202	29,110	95772202,95773920	No	No	No	bcc_21830|Cycle_0|Type_1	29,31	95772202,95773999	psi1:0.890625,psi2:1.0	C1_57,C2_90	C1_7,C2_0	Yes
ENSG00000136243	NUPL2	chr7:23226734-23236329	+	ES	77	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,77,31	23226765,23235458,23235534,23236299	No	No	No	bcc_49329|Cycle_0|Type_1	31,31	23226765,23236299	psi1:0.612903225806,psi2:0.866666666667	C1_19,C2_13	C1_12,C2_2	Yes
ENSG00000127952	STYXL1	chr7:75634693-75651199	-	ES	146	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,146,31	75634722,75643060,75643205,75651169	No	No	No	bcc_50809|Cycle_0|Type_1	29,31	75634722,75651169	psi1:0.642857142857,psi2:0.866666666667	C1_9,C2_26	C1_5,C2_4	Yes
ENSG00000126858	RHOT1	chr17:30535297-30551665	+	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,123,31	30535328,30538135,30538257,30551635	No	No	No	bcc_36692|Cycle_0|Type_1	31,31	30535328,30551635	psi1:0.735294117647,psi2:0.461538461538	C1_25,C2_6	C1_9,C2_7	Yes
ENSG00000156976	EIF4A2	chr3:186505641-186506125	+	IR	427	Yes	Yes	protein_coding	no_known_ss	484	-	No	No	No	bcc_31120|Cycle_0|Type_1	30,27	186505671,186506099	psi1:0.951612903226,psi2:0.775862068966	C1_59,C2_45	C1_3,C2_13	Yes
ENSG00000153250	RBMS1	chr2:161137846-161141313	-	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,48,28	161137875,161138768,161138815,161141286	No	No	No	bcc_69840|Cycle_0|Type_1	29,28	161137875,161141286	psi1:0.615384615385,psi2:0.357142857143	C1_8,C2_5	C1_5,C2_9	Yes
ENSG00000124104	SNX21	chr20:44463717-44469308	+	ES_altD	18	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	38,11,31	44463755,44469087,44469097,44469278	No	Yes	No	bcc_77141|Cycle_3|Type_1	31,31	44463748,44469278	psi1:0.666666666667,psi2:1.0	C1_4,C2_1	C1_2,C2_0	Yes
ENSG00000188223,ENSG00000267796	AC002398.9,LIN37	chr19:36243704-36243868	+	altA	25	Yes	Yes	protein_coding,protein_coding	2_ss_annotated_(over_3_ss):36243734,36243815	30,54	36243734,36243815	No	No	No	bcc_73508|Cycle_0|Type_1	30,29	36243734,36243840	psi1:0.777777777778,psi2:1.0	C1_7,C2_3	C1_2,C2_0	(GT:36243734,AG:36243840);(GT:36243734,GG:36243815)
ENSG00000114812	VIPR1	chr3:42572374-42572990	+	altD	20	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	50,28	42572424,42572963	No	No	No	bcc_69098|Cycle_0|Type_1	30,28	42572404,42572963	psi1:0.4,psi2:0.666666666667	C1_2,C2_6	C1_3,C2_3	Yes
ENSG00000103197	TSC2	chr16:2126555-2129064	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	2126586,2129033	No	No	No	bcc_66332|Cycle_0|Type_1	31,29	2126586,2129036	psi1:0.466666666667,psi2:1.0	C1_14,C2_2	C1_16,C2_0	Yes
ENSG00000114126	TFDP2	chr3:141693003-141697392	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	141693036,141697362	No	No	No	bcc_61923|Cycle_0|Type_1	30,31	141693033,141697362	psi1:0,psi2:0.333333333333	C1_0,C2_6	C1_3,C2_12	Yes
ENSG00000048162	NOP16	chr5:175811255-175812252	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	175811287,175812222	No	Yes	No	bcc_56016|Cycle_0|Type_1	29,31	175811284,175812222	psi1:0,psi2:0.333333333333	C1_0,C2_4	C1_2,C2_8	Yes
ENSG00000154589	LY96	chr8:74903758-74922266	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,31	74903789,74917031,74917120,74922236	No	No	No	bcc_54148|Cycle_1|Type_1	31,31	74903789,74922236	psi1:1.0,psi2:0.8	C1_8,C2_16	C1_0,C2_4	Yes
ENSG00000132589	FLOT2	chr17:27210220-27215993	-	ES	91	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,91,31	27210249,27212875,27212965,27215963	No	Yes	No	bcc_53983|Cycle_0|Type_1	29,31	27210249,27215963	psi1:0.7,psi2:1.0	C1_14,C2_4	C1_6,C2_0	Yes
ENSG00000107672	NSMCE4A	chr10:123718896-123719045	-	IR	90	No	Yes	protein_coding	no_known_ss	149	-	No	No	No	bcc_56552|Cycle_0|Type_1	29,30	123718925,123719016	psi1:0.0666666666667,psi2:0.34	C1_1,C2_17	C1_14,C2_33	Yes
ENSG00000101190	TCFL5	chr20:61488958-61490746	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):61490716,61488990	32,31	61488990,61490716	No	No	No	bcc_57653|Cycle_0|Type_1	29,31	61488987,61490716	psi1:0.821428571429,psi2:0.5	C1_23,C2_2	C1_5,C2_2	Yes
ENSG00000115392	FANCL	chr2:58390052-58390193	+	IR	81	No	Yes	protein_coding	no_known_ss	141	-	No	No	No	bcc_33430|Cycle_0|Type_1	30,30	58390082,58390164	psi1:0.461538461538,psi2:0.714285714286	C1_6,C2_10	C1_7,C2_4	(CT:58390082,AC:58390164)
ENSG00000152795	HNRNPDL	chr4:83346007-83347219	-	IR	1153	Yes	-	protein_coding	no_known_ss	1212	-	No	Yes	Yes	bcc_30972|Cycle_0|Type_1	29,30	83346036,83347190	psi1:0.552419354839,psi2:0.801169590643	C1_274,C2_274	C1_222,C2_68	Yes
ENSG00000135047	CTSL	chr9:90341194-90342537	+	altD	90	No	-	protein_coding	all_splice_sites_known_(3_ss)	119,29	90341313,90342509	No	Yes	No	bcc_52159|Cycle_8|Type_1	29,29	90341223,90342509	psi1:0.545454545455,psi2:0.818181818182	C1_6,C2_36	C1_5,C2_8	Yes
ENSG00000155313	USP25	chr21:17138430-17163851	+	ES	124	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,124,31	17138460,17150223,17150346,17163821	No	No	No	bcc_60511|Cycle_0|Type_1	30,31	17138460,17163821	psi1:0.8125,psi2:1.0	C1_13,C2_7	C1_3,C2_0	Yes
ENSG00000204054	LINC00963	chr9:132251547-132255785	+	altA	59	Yes	-	processed_transcript	all_splice_sites_known_(3_ss)	31,88	132251578,132255698	No	Yes	No	bcc_18110|Cycle_7|Type_1	31,29	132251578,132255757	psi1:0.75,psi2:0.941176470588	C1_6,C2_32	C1_2,C2_2	Yes
ENSG00000008517	IL32	chr16:3115464-3115814	+	ES	46	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,46,30	3115495,3115643,3115688,3115785	No	Yes	No	bcc_25856|Cycle_4|Type_1	31,30	3115495,3115785	psi1:0,psi2:0.5	C1_0,C2_20	C1_3,C2_20	Yes
ENSG00000008517	IL32	chr16:3115464-3115814	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,33	3115495,3115782	No	Yes	No	bcc_25856|Cycle_2|Type_1	31,30	3115495,3115785	psi1:0,psi2:0.5	C1_0,C2_20	C1_3,C2_20	Yes
ENSG00000129691	ASH2L	chr8:37974213-37976817	+	ES	18	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):37974970,37974243,37976788	30,18,30	37974243,37974970,37974987,37976788	No	Yes	No	bcc_36186|Cycle_1|Type_1	30,30	37974243,37976788	psi1:0.255319148936,psi2:0	C1_12,C2_0	C1_35,C2_12	Yes
ENSG00000086758	HUWE1	chrX:53569470-53570877	-	altD	45	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,76	53569500,53570802	No	No	No	bcc_23567|Cycle_0|Type_1	30,31	53569500,53570847	psi1:0.5625,psi2:0.809523809524	C1_18,C2_17	C1_14,C2_4	Yes
ENSG00000080815	PSEN1	chr14:73614771-73637535	+	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	43,31	73614814,73637505	No	No	No	bcc_49283|Cycle_0|Type_1	31,31	73614802,73637505	psi1:0.658536585366,psi2:0.333333333333	C1_27,C2_3	C1_14,C2_6	Yes
ENSG00000099331	MYO9B	chr19:17313081-17313682	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	17313112,17313651	No	No	No	bcc_70589|Cycle_0|Type_1	31,29	17313112,17313654	psi1:0.4375,psi2:0.714285714286	C1_7,C2_5	C1_9,C2_2	Yes
ENSG00000135473	PAN2	chr12:56717939-56718107	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,30	56717969,56718078	No	No	No	bcc_55154|Cycle_0|Type_1	27,30	56717966,56718078	psi1:1.0,psi2:0.642857142857	C1_2,C2_9	C1_0,C2_5	Yes
ENSG00000146085	MUT	chr6:49427187-49430909	-	altD	65	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):49430816,49427218	31,94	49427218,49430816	No	No	No	bcc_30496|Cycle_0|Type_1	31,29	49427218,49430881	psi1:0.714285714286,psi2:0.909090909091	C1_5,C2_10	C1_2,C2_1	Yes
ENSG00000205250	E2F4	chr16:67227388-67228618	+	ES	62	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,62,30	67227418,67228301,67228362,67228589	No	No	No	bcc_15946|Cycle_0|Type_1	30,30	67227418,67228589	psi1:0.857142857143,psi2:1.0	C1_12,C2_10	C1_2,C2_0	Yes
ENSG00000079819	EPB41L2	chr6:131188692-131190982	-	altD	249	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,280	131188721,131190703	No	Yes	No	bcc_46240|Cycle_30|Type_1	29,31	131188721,131190952	psi1:0.789473684211,psi2:1.0	C1_45,C2_20	C1_12,C2_0	Yes
ENSG00000117010	ZNF684	chr1:40998824-41007316	+	ES	127	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,127,30	40998853,41006258,41006384,41007287	No	No	No	bcc_11315|Cycle_0|Type_1	29,30	40998853,41007287	psi1:0.875,psi2:1.0	C1_14,C2_15	C1_2,C2_0	Yes
ENSG00000132670	PTPRA	chr20:2945817-2967439	+	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,29	2945848,2955861,2955887,2967411	No	No	No	bcc_37468|Cycle_0|Type_1	31,29	2945848,2967411	psi1:0.446428571429,psi2:0.1	C1_25,C2_1	C1_31,C2_9	Yes
ENSG00000166012	TAF1D	chr11:93463848-93467820	-	ES_MULTI	245	Yes	Yes	protein_coding	all_splice_sites_known_(12_ss)	30,67,47,48,35,48,30	93463878,93464316,93464382,93464919,93464965,93465410,93465457,93466253,93466287,93466516,93466563,93467791	No	Yes	No	bcc_16773|Cycle_1|Type_1	30,30	93463878,93467791	psi1:1.0,psi2:0.888888888889	C1_122,C2_88	C1_0,C2_11	(AC:93466516,CT:93466287);(AC:93464919,CT:93464382);(AC:93467791,CT:93463878);(AC:93465410,CT:93464965);(GC:93464316,CT:93463878);(AC:93466253,CT:93465457);(AC:93467791,CT:93466563)
ENSG00000257698	RP11-620J15.3	chr12:58329305-58329864	-	altD	212	Yes	-	lincRNA	2_ss_annotated_(over_3_ss):58329336,58329622	31,243	58329336,58329622	No	No	No	bcc_55292|Cycle_0|Type_1	31,31	58329336,58329834	psi1:0.957746478873,psi2:0.666666666667	C1_68,C2_2	C1_3,C2_1	Yes
ENSG00000116667	C1orf21	chr1:184590169-184590697	-	IR	468	No	-	protein_coding	no_known_ss	528	-	No	No	No	bcc_12399|Cycle_0|Type_1	30,30	184590199,184590668	psi1:1.0,psi2:0.897435897436	C1_59,C2_35	C1_0,C2_4	Yes
ENSG00000151150	ANK3	chr10:61840347-61842403	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,27,31	61840376,61841908,61841934,61842373	No	No	No	bcc_17107|Cycle_0|Type_1	29,31	61840376,61842373	psi1:0.266666666667,psi2:0	C1_8,C2_0	C1_22,C2_7	Yes
ENSG00000085511	MAP3K4	chr6:161514840-161518141	+	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	43,30	161514883,161518112	No	No	No	bcc_64083|Cycle_0|Type_1	31,30	161514871,161518112	psi1:0.578947368421,psi2:0	C1_11,C2_0	C1_8,C2_1	Yes
ENSG00000176124	DLEU1	chr13:50656662-50678869	+	ES	53	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,53,30	50656693,50657278,50657330,50678840	No	No	No	bcc_50530|Cycle_0|Type_1	31,30	50656693,50678840	psi1:0,psi2:0.578947368421	C1_0,C2_11	C1_1,C2_8	Yes
ENSG00000100028,ENSG00000100031	SNRPD3,GGT1	chr22:25003961-25005959	+	altA	3	No	-	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	29,31	25003990,25005929	No	No	No	bcc_22618|Cycle_0|Type_1	29,28	25003990,25005932	psi1:1.0,psi2:0.421052631579	C1_1,C2_8	C1_0,C2_11	Yes
ENSG00000145012	LPP	chr3:188605882-188605943	-	deletion	3	No	-	protein_coding	no_known_ss	61	188605882	No	No	No	bcc_1766|Cycle_0|Type_1	27,31	188605909,188605913	psi1:0.888888888889,psi2:1.0	C1_16,C2_22	C1_2,C2_0	-
ENSG00000148335	NTMT1	chr9:132396470-132397516	+	altD	85	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	115,30	132396585,132397487	No	No	No	bcc_16117|Cycle_0|Type_1	30,30	132396500,132397487	psi1:0.842105263158,psi2:1.0	C1_16,C2_11	C1_3,C2_0	Yes
ENSG00000124486	USP9X	chrX:41010280-41012229	+	altA	15	No	-	protein_coding	2_ss_annotated_(over_3_ss):41012201,41010310	30,44	41010310,41012186	No	No	No	bcc_14408|Cycle_0|Type_1	30,29	41010310,41012201	psi1:0.470588235294,psi2:0.727272727273	C1_8,C2_8	C1_9,C2_3	Yes
ENSG00000151092	NGLY1	chr3:25761096-25770654	-	ES	178	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,178,31	25761126,25761505,25761682,25770624	No	No	No	bcc_52866|Cycle_1|Type_1	30,31	25761126,25770624	psi1:1.0,psi2:0.840909090909	C1_25,C2_37	C1_0,C2_7	Yes
ENSG00000136436	CALCOCO2	chr17:46933518-46937706	+	ES	38	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,38,31	46933549,46933941,46933978,46937676	No	No	No	bcc_11674|Cycle_0|Type_1	31,31	46933549,46937676	psi1:0.185714285714,psi2:0	C1_13,C2_0	C1_57,C2_30	Yes
ENSG00000147996	CBWD5	chr9:70463047-70467514	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,87,31	70463075,70465708,70465794,70467484	Yes	Yes	Yes	bcc_11223|Cycle_35|Type_1	28,31	70463075,70467484	psi1:0.733333333333,psi2:0.923076923077	C1_11,C2_36	C1_4,C2_3	Yes
ENSG00000196873	CBWD3	chr9:70879399-70883877	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,87,28	70879430,70881136,70881222,70883850	Yes	Yes	Yes	bcc_11223|Cycle_35|Type_1	31,28	70879430,70883850	psi1:0.733333333333,psi2:0.923076923077	C1_11,C2_36	C1_4,C2_3	Yes
ENSG00000215126	CBWD7	chr9:42679450-42683917	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,87,28	42679481,42681171,42681257,42683890	Yes	Yes	Yes	bcc_11223|Cycle_35|Type_1	31,28	42679481,42683890	psi1:0.733333333333,psi2:0.923076923077	C1_11,C2_36	C1_4,C2_3	Yes
ENSG00000141504	SAT2	chr17:7530702-7530917	-	altD	17	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,47	7530732,7530871	No	Yes	No	bcc_51863|Cycle_2|Type_1	30,30	7530732,7530888	psi1:0.884615384615,psi2:0.582524271845	C1_23,C2_60	C1_3,C2_43	Yes
ENSG00000100568	VTI1B	chr14:68114610-68114672	+	deletion	3	No	-	protein_coding	no_known_ss	62	68114610	No	Yes	No	bcc_19775|Cycle_3|Type_1	28,31	68114638,68114642	psi1:1.0,psi2:0.866666666667	C1_12,C2_13	C1_0,C2_2	-
ENSG00000169826	CSGALNACT2	chr10:43656012-43671428	+	ES_MULTI	274	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,179,95,30	43656043,43659314,43659492,43662452,43662546,43671399	No	No	No	bcc_40670|Cycle_0|Type_1	31,30	43656043,43671399	psi1:0.838709677419,psi2:1.0	C1_26,C2_17	C1_5,C2_0	Yes
ENSG00000146063	TRIM41	chr5:180662048-180662384	-	IR	274	Yes	Yes	protein_coding	no_known_ss	336	-	No	Yes	No	bcc_52637|Cycle_4|Type_1	31,31	180662079,180662354	psi1:1.0,psi2:0.913043478261	C1_57,C2_21	C1_0,C2_2	(AG:180662354,GT:180662079)
ENSG00000109184	DCUN1D4	chr4:52765513-52779485	+	ES	105	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,105,30	52765544,52777236,52777340,52779456	No	No	No	bcc_24613|Cycle_0|Type_1	31,30	52765544,52779456	psi1:0.8,psi2:1.0	C1_28,C2_13	C1_7,C2_0	Yes
ENSG00000214078,ENSG00000272897,ENSG00000244462	CPNE1,RP1-309K20.6,RBM12	chr20:34220815-34252712	-	ES_MULTI	228	No	-	protein_coding,protein_coding,protein_coding	all_splice_sites_known_(6_ss)	30,143,85,31	34220845,34243124,34243266,34246852,34246936,34252682	No	Yes	No	bcc_6829|Cycle_0|Type_1	30,31	34220845,34252682	psi1:0.931034482759,psi2:0.75	C1_27,C2_9	C1_2,C2_3	Yes
ENSG00000099290	FAM21A	chr10:51885179-51887373	+	ES_MULTI	186	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,123,63,31	51885209,51885817,51885939,51886920,51886982,51887343	No	Yes	No	bcc_42745|Cycle_3|Type_1	30,31	51885209,51887343	psi1:0.870967741935,psi2:1.0	C1_27,C2_26	C1_4,C2_0	Yes
ENSG00000143337	TOR1AIP1	chr1:179853873-179858475	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	179853904,179858445	No	No	No	bcc_29325|Cycle_0|Type_1	31,28	179853904,179858448	psi1:0.533333333333,psi2:0.285714285714	C1_8,C2_4	C1_7,C2_10	Yes
ENSG00000134717	BTF3L4	chr1:52522020-52530525	+	ES	67	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,67,29	52522051,52525507,52525573,52530497	No	No	No	bcc_17712|Cycle_0|Type_1	31,29	52522051,52530497	psi1:0.833333333333,psi2:0.6	C1_20,C2_6	C1_4,C2_4	Yes
ENSG00000189014	FAM35DP	chr10:47400706-47409881	+	ES	207	No	-	pseudogene	all_splice_sites_known_(4_ss)	30,207,29	47400736,47405671,47405877,47409853	No	Yes	No	bcc_46816|Cycle_8|Type_1	30,29	47400736,47409853	psi1:0.75,psi2:0.947368421053	C1_9,C2_72	C1_3,C2_4	Yes
ENSG00000231584	FAHD2CP	chr2:96688471-96688768	+	IR	238	Yes	Yes	pseudogene	no_known_ss	297	-	No	No	No	bcc_56831|Cycle_0|Type_1	30,29	96688501,96688740	psi1:0.953125,psi2:0.666666666667	C1_61,C2_2	C1_3,C2_1	Yes
ENSG00000124104	SNX21	chr20:44463724-44469307	+	ES	11	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,11,30	44463755,44469087,44469097,44469278	No	Yes	No	bcc_77141|Cycle_0|Type_1	31,30	44463755,44469278	psi1:0.75,psi2:0.5	C1_3,C2_1	C1_1,C2_1	Yes
ENSG00000226174,ENSG00000182979	TEX22,MTA1	chr14:105911817-105916425	+	ES	51	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,51,31	105911848,105915696,105915746,105916395	No	No	No	bcc_76777|Cycle_0|Type_1	31,31	105911848,105916395	psi1:0.75,psi2:1.0	C1_6,C2_2	C1_2,C2_0	Yes
ENSG00000179134	SAMD4B	chr19:39833187-39847358	+	ES	61	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	29,61,30	39833216,39844646,39844706,39847329	No	No	No	bcc_68054|Cycle_0|Type_1	29,30	39833216,39847329	psi1:0.75,psi2:1.0	C1_6,C2_2	C1_2,C2_0	Yes
ENSG00000071991	CDH19	chr18:64176426-64178834	-	altA	28	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	57,30	64176483,64178805	No	No	No	bcc_66693|Cycle_0|Type_1	29,30	64176455,64178805	psi1:0.625,psi2:1.0	C1_5,C2_1	C1_3,C2_0	Yes
ENSG00000099331	MYO9B	chr19:17283239-17283595	+	altD	18	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):17283568,17283287	48,28	17283287,17283568	No	No	No	bcc_62920|Cycle_0|Type_1	30,28	17283269,17283568	psi1:0.75,psi2:1.0	C1_6,C2_2	C1_2,C2_0	Yes
ENSG00000154845	PPP4R1	chr18:9562043-9563406	-	ES	123	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):9562920,9562073,9563376	30,123,31	9562073,9562920,9563042,9563376	No	Yes	No	bcc_51685|Cycle_3|Type_1	30,31	9562073,9563376	psi1:0.75,psi2:0.5	C1_6,C2_2	C1_2,C2_2	Yes
ENSG00000078674	PCM1	chr8:17780666-17793126	+	ES	68	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,68,29	17780697,17782222,17782289,17793098	No	No	No	bcc_32442|Cycle_0|Type_1	31,29	17780697,17793098	psi1:0.625,psi2:1.0	C1_10,C2_2	C1_6,C2_0	Yes
ENSG00000203705	TATDN3	chr1:212981161-212985623	+	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):212985590,212981190	29,34	212981190,212985590	No	Yes	No	bcc_32312|Cycle_0|Type_1	29,28	212981190,212985596	psi1:0.75,psi2:1.0	C1_6,C2_2	C1_2,C2_0	Yes
ENSG00000147044	CASK	chrX:41394182-41401974	-	altA	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	44,31	41394226,41401944	No	No	No	bcc_32264|Cycle_0|Type_1	29,31	41394211,41401944	psi1:0.666666666667,psi2:1.0	C1_26,C2_6	C1_13,C2_0	Yes
ENSG00000121957	GPSM2	chr1:109465138-109465199	+	deletion	3	No	Yes	protein_coding	no_known_ss	61	109465138	No	Yes	Yes	bcc_3108|Cycle_0|Type_1	27,31	109465165,109465169	psi1:0.625,psi2:1.0	C1_10,C2_2	C1_6,C2_0	-
ENSG00000163138	PACRGL	chr4:20729248-20729309	-	deletion	3	No	-	protein_coding	no_known_ss	61	20729248	No	No	No	bcc_12859|Cycle_0|Type_1	27,31	20729275,20729279	psi1:0.625,psi2:1.0	C1_5,C2_1	C1_3,C2_0	-
ENSG00000154845	PPP4R1	chr18:9562043-9563405	-	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,125,30	9562073,9562920,9563044,9563376	No	Yes	No	bcc_51685|Cycle_5|Type_1	30,30	9562073,9563376	psi1:0.882352941176,psi2:0.666666666667	C1_15,C2_4	C1_2,C2_2	Yes
ENSG00000204463	BAG6	chr6:31606974-31608006	-	ES	147	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,147,31	31607003,31607277,31607423,31607976	No	No	No	bcc_52181|Cycle_4|Type_1	29,31	31607003,31607976	psi1:0.833333333333,psi2:0.549668874172	C1_40,C2_83	C1_8,C2_68	Yes
ENSG00000077809	GTF2I	chr7:74131241-74143150	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,63,27	74131270,74133198,74133260,74143124	No	No	No	bcc_19354|Cycle_0|Type_1	29,27	74131270,74143124	psi1:0.616666666667,psi2:0.333333333333	C1_37,C2_7	C1_23,C2_14	Yes
ENSG00000071626	DAZAP1	chr19:1432649-1434762	+	altD	9	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):1434736,1432689	40,27	1432689,1434736	No	Yes	No	bcc_50252|Cycle_0|Type_1	31,27	1432680,1434736	psi1:0.5,psi2:0.875	C1_1,C2_28	C1_1,C2_4	Yes
ENSG00000123728	RAP2C	chrX:131351201-131351336	-	IR	75	No	Yes	protein_coding	no_known_ss	135	-	No	No	No	bcc_15766|Cycle_0|Type_1	29,31	131351230,131351306	psi1:1.0,psi2:0.85	C1_12,C2_17	C1_0,C2_3	Yes
ENSG00000182534	MXRA7	chr17:74676931-74681184	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,81,31	74676961,74679929,74680009,74681154	No	No	No	bcc_22904|Cycle_0|Type_1	30,31	74676961,74681154	psi1:0.675675675676,psi2:0.222222222222	C1_75,C2_2	C1_36,C2_7	Yes
ENSG00000184076	UQCR10	chr22:30163506-30165696	+	altD	59	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	90,30	30163596,30165667	No	No	No	bcc_19965|Cycle_0|Type_1	31,30	30163537,30165667	psi1:0.223880597015,psi2:0.0567375886525	C1_15,C2_8	C1_52,C2_133	Yes
ENSG00000073417	PDE8A	chr15:85632616-85641207	+	ES	138	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,138,29	85632647,85634275,85634412,85641179	No	Yes	No	bcc_32243|Cycle_8|Type_1	31,29	85632647,85641179	psi1:1.0,psi2:0.888888888889	C1_20,C2_16	C1_0,C2_2	Yes
ENSG00000076513	ANKRD13A	chr12:110468532-110474093	+	ES	161	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,161,28	110468563,110471602,110471762,110474066	No	No	No	bcc_35418|Cycle_0|Type_1	31,28	110468563,110474066	psi1:1.0,psi2:0.9	C1_29,C2_18	C1_0,C2_2	Yes
ENSG00000153560	UBP1	chr3:33444365-33450758	-	ES	108	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,108,31	33444396,33450182,33450289,33450728	No	No	No	bcc_36629|Cycle_0|Type_1	31,31	33444396,33450728	psi1:0.915254237288,psi2:0.5	C1_54,C2_1	C1_5,C2_1	Yes
ENSG00000164978	NUDT2	chr9:34338814-34339057	+	altA	7	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):34338845,34339022	31,36	34338845,34339022	No	No	No	bcc_51816|Cycle_0|Type_1	31,29	34338845,34339029	psi1:0.894736842105,psi2:1.0	C1_17,C2_24	C1_2,C2_0	Yes
ENSG00000126777	KTN1	chr14:56128301-56133989	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,87,31	56128330,56130673,56130759,56133959	No	Yes	No	bcc_29723|Cycle_0|Type_1	29,31	56128330,56133959	psi1:0.684210526316,psi2:0.430769230769	C1_78,C2_28	C1_36,C2_37	Yes
ENSG00000111647	UHRF1BP1L	chr12:100476884-100480083	-	ES	183	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,183,31	100476912,100478254,100478436,100480053	No	No	No	bcc_44628|Cycle_0|Type_1	28,31	100476912,100480053	psi1:0.8125,psi2:1.0	C1_39,C2_19	C1_9,C2_0	Yes
ENSG00000106263	EIF3B	chr7:2419115-2419948	+	altA	80	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):2419146,2419839	31,110	2419146,2419839	No	Yes	No	bcc_41965|Cycle_5|Type_1	31,30	2419146,2419919	psi1:0.826086956522,psi2:0.969696969697	C1_19,C2_32	C1_4,C2_1	Yes
ENSG00000137449	CPEB2	chr4:15009180-15018841	+	altD	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	39,30	15009219,15018812	No	No	No	bcc_34035|Cycle_0|Type_1	30,30	15009210,15018812	psi1:0.275862068966,psi2:0	C1_8,C2_0	C1_21,C2_6	Yes
ENSG00000148341	SH3GLB2	chr9:131772483-131776720	-	ES_MULTI	75	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	5,24,63,12,31	131772488,131772949,131772972,131774515,131774577,131775287,131775298,131776690	No	Yes	No	bcc_20575|Cycle_5|Type_1	5,24,31	131772488,131772949,131772972,131776690	psi1:0.724137931034,psi2:1.0	C1_21,C2_6	C1_8,C2_0	Yes
ENSG00000204054	LINC00963	chr9:132251547-132265629	+	ES	180	No	-	processed_transcript	all_splice_sites_known_(4_ss)	31,180,28	132251578,132255695,132255874,132265602	No	Yes	No	bcc_18110|Cycle_26|Type_1	31,28	132251578,132265602	psi1:0.666666666667,psi2:0.896551724138	C1_4,C2_26	C1_2,C2_3	Yes
ENSG00000066336	SPI1	chr11:47397249-47399889	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,30	47397283,47399860	No	No	No	bcc_60167|Cycle_0|Type_1	31,30	47397280,47399860	psi1:0.380952380952,psi2:0.125	C1_8,C2_1	C1_13,C2_7	Yes
ENSG00000124222,ENSG00000254995	STX16,STX16-NPEPL1	chr20:57245631-57248716	+	ES	144	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	28,144,30	57245659,57246210,57246353,57248687	No	No	No	bcc_20275|Cycle_0|Type_1	28,30	57245659,57248687	psi1:1.0,psi2:0.909090909091	C1_41,C2_20	C1_0,C2_2	Yes
ENSG00000169727	GPS1	chr17:80012821-80013069	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):80012851,80013038	30,32	80012851,80013038	No	No	No	bcc_67512|Cycle_0|Type_1	30,29	80012851,80013041	psi1:0.814814814815,psi2:0.966666666667	C1_22,C2_29	C1_5,C2_1	Yes
ENSG00000138041	SMEK2	chr2:55804462-55806843	-	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,96,29	55804492,55805383,55805478,55806815	No	No	No	bcc_7907|Cycle_0|Type_1	30,29	55804492,55806815	psi1:0.5,psi2:0.785714285714	C1_3,C2_22	C1_3,C2_6	Yes
ENSG00000025156	HSF2	chr6:122744800-122752605	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,31	122744831,122749048,122749101,122752575	No	No	No	bcc_45352|Cycle_0|Type_1	31,31	122744831,122752575	psi1:0.666666666667,psi2:0.4	C1_8,C2_2	C1_4,C2_3	Yes
ENSG00000153113	CAST	chr5:96075794-96077000	+	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,39,31	96075822,96076449,96076487,96076970	No	No	No	bcc_38164|Cycle_0|Type_1	28,31	96075822,96076970	psi1:0.68,psi2:0.433333333333	C1_17,C2_13	C1_8,C2_17	Yes
ENSG00000183077	AFMID	chr17:76198801-76202057	+	ES	73	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,73,31	76198832,76200909,76200981,76202027	No	Yes	No	bcc_3143|Cycle_61|Type_1	31,31	76198832,76202027	psi1:0.111111111111,psi2:0.387096774194	C1_1,C2_12	C1_8,C2_19	Yes
ENSG00000151116	UEVLD	chr11:18554005-18557983	-	ES	124	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,124,31	18554034,18555877,18556000,18557953	No	No	No	bcc_58929|Cycle_0|Type_1	29,31	18554034,18557953	psi1:0.833333333333,psi2:0.615384615385	C1_15,C2_8	C1_3,C2_5	Yes
ENSG00000131069	ACSS2	chr20:33470762-33511153	+	ES_MULTI	1174	Yes	Yes	protein_coding	all_splice_sites_known_(24_ss)	30,92,104,73,76,115,138,171,134,133,57,81,28	33470792,33500899,33500990,33501196,33501299,33501556,33501628,33501899,33501974,33502126,33502240,33507238,33507375,33508342,33508512,33508809,33508942,33509133,33509265,33509347,33509403,33509589,33509669,33511126	No	No	No	bcc_54381|Cycle_0|Type_1	30,28	33470792,33511126	psi1:0.92,psi2:1.0	C1_92,C2_283	C1_8,C2_0	(GT:33500990,AG:33501196);(GT:33501974,AG:33502126);(GT:33509265,AG:33509347);(GT:33470792,AG:33511126);(GT:33508942,AG:33509133);(GT:33508512,AG:33508809);(GT:33509669,AG:33511126);(GT:33501299,AG:33501556);(GC:33507375,AG:33508342);(GT:33509403,AG:33509589);(GT:33502240,AG:33507238);(GT:33470792,AG:33500899);(GT:33501628,AG:33501899)
ENSG00000076242	MLH1	chr3:37053559-37061830	+	ES	94	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,94,30	37053590,37058997,37059090,37061801	No	Yes	No	bcc_52862|Cycle_2|Type_1	31,30	37053590,37061801	psi1:0.875,psi2:1.0	C1_14,C2_13	C1_2,C2_0	Yes
ENSG00000152952	PLOD2	chr3:145794652-145796933	-	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,63,31	145794682,145795649,145795711,145796903	No	No	No	bcc_40001|Cycle_0|Type_1	30,31	145794682,145796903	psi1:0.75,psi2:0.461538461538	C1_15,C2_30	C1_5,C2_35	Yes
ENSG00000187147	RNF220	chr1:45101229-45101730	+	altD	78	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	109,29	45101338,45101702	No	No	No	bcc_49351|Cycle_0|Type_1	31,29	45101260,45101702	psi1:0.357142857143,psi2:0.636363636364	C1_35,C2_21	C1_63,C2_12	Yes
ENSG00000140400	MAN2C1	chr15:75648691-75648977	-	altA	69	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	99,31	75648790,75648947	No	No	No	bcc_52085|Cycle_0|Type_1	30,31	75648721,75648947	psi1:1.0,psi2:0.826086956522	C1_10,C2_19	C1_0,C2_4	Yes
ENSG00000163812	ZDHHC3	chr3:44970897-44974640	-	ES	84	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,84,31	44970928,44974399,44974482,44974610	No	Yes	No	bcc_37222|Cycle_4|Type_1	31,31	44970928,44974610	psi1:0.181818181818,psi2:0.421052631579	C1_2,C2_8	C1_9,C2_11	Yes
ENSG00000144283	PKP4	chr2:159488422-159490613	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	159488453,159490582	No	No	No	bcc_30452|Cycle_0|Type_1	31,29	159488453,159490585	psi1:0.5,psi2:0.833333333333	C1_16,C2_5	C1_16,C2_1	Yes
ENSG00000031698	SARS	chr1:109779463-109779894	-	IR	373	Yes	Yes	protein_coding	no_known_ss	431	-	No	No	No	bcc_12927|Cycle_0|Type_1	29,29	109779492,109779866	psi1:0.553191489362,psi2:1.0	C1_26,C2_4	C1_21,C2_0	(AG:109779866,GT:109779492)
ENSG00000147649	MTDH	chr8:98703385-98718884	+	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,99,31	98703416,98711982,98712080,98718854	No	No	No	bcc_16362|Cycle_0|Type_1	31,31	98703416,98718854	psi1:0.709677419355,psi2:0.9	C1_44,C2_99	C1_18,C2_11	Yes
ENSG00000100485	SOS2	chr14:50584356-50584520	-	IR	103	Yes	-	protein_coding	no_known_ss	164	-	No	No	No	bcc_52874|Cycle_0|Type_1	30,31	50584386,50584490	psi1:1.0,psi2:0.896551724138	C1_35,C2_26	C1_0,C2_3	(CC:50584490,AC:50584386)
ENSG00000104613	INTS10	chr8:19677159-19679980	+	ES	140	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,140,31	19677187,19677890,19678029,19679950	No	No	No	bcc_48508|Cycle_1|Type_1	28,31	19677187,19679950	psi1:0.897435897436,psi2:1.0	C1_35,C2_48	C1_4,C2_0	Yes
ENSG00000163170	BOLA3	chr2:74362758-74372345	-	ES	89	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,89,30	74362785,74369399,74369487,74372316	No	No	No	bcc_58213|Cycle_0|Type_1	27,30	74362785,74372316	psi1:0.660714285714,psi2:0.866666666667	C1_37,C2_52	C1_19,C2_8	Yes
ENSG00000105443	CYTH2	chr19:48978176-48981355	+	altAD	3	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):48981326,48978206	31,32	48978207,48981324	No	No	No	bcc_56634|Cycle_0|Type_1	30,30	48978206,48981326	psi1:0.892857142857,psi2:0.666666666667	C1_25,C2_4	C1_3,C2_2	(TA:48978207,TC:48981324);(GT:48978206,AG:48981326)
ENSG00000168214	RBPJ	chr4:26322639-26388004	+	ES	183	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,183,30	26322670,26364068,26364250,26387975	No	No	No	bcc_30042|Cycle_0|Type_1	31,30	26322670,26387975	psi1:0.653846153846,psi2:1.0	C1_34,C2_7	C1_18,C2_0	Yes
ENSG00000100227	POLDIP3	chr22:42995771-42998806	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,87,31	42995799,42997976,42998062,42998776	No	No	No	bcc_15684|Cycle_0|Type_1	28,31	42995799,42998776	psi1:0.777777777778,psi2:0.95652173913	C1_28,C2_22	C1_8,C2_1	Yes
ENSG00000114956	DGUOK	chr2:74174003-74185303	+	ES_MULTI	264	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,148,116,31	74174033,74177712,74177859,74184252,74184367,74185273	No	Yes	No	bcc_58675|Cycle_18|Type_1	30,31	74174033,74185273	psi1:0.967213114754,psi2:0.80487804878	C1_59,C2_66	C1_2,C2_16	Yes
ENSG00000130706	ADRM1	chr20:60883203-60883740	+	ES	103	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,103,30	60883234,60883424,60883526,60883711	No	No	No	bcc_66827|Cycle_0|Type_1	31,30	60883234,60883711	psi1:0.923076923077,psi2:1.0	C1_36,C2_115	C1_3,C2_0	Yes
ENSG00000100813	ACIN1	chr14:23533401-23533594	-	altA	36	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	65,31	23533466,23533564	No	No	No	bcc_64440|Cycle_0|Type_1	29,31	23533430,23533564	psi1:1.0,psi2:0.909090909091	C1_18,C2_10	C1_0,C2_1	Yes
ENSG00000144283	PKP4	chr2:159477903-159481493	+	altA	77	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,104	159477933,159481390	No	Yes	No	bcc_62110|Cycle_0|Type_1	30,27	159477933,159481467	psi1:0.984375,psi2:0.866666666667	C1_63,C2_13	C1_1,C2_2	Yes
ENSG00000163125	RPRD2	chr1:150444187-150444389	+	IR	140	Yes	Yes	protein_coding	no_known_ss	202	-	No	No	No	bcc_14684|Cycle_0|Type_1	31,31	150444218,150444359	psi1:0.9375,psi2:0.764705882353	C1_15,C2_13	C1_1,C2_4	Yes
ENSG00000132424	PNISR	chr6:99862532-99873121	-	ES_altA	84	No	-	protein_coding	4_ss_annotated_(over_5_ss):99864304,99864225,99873091,99862566	34,80,31	99862566,99864225,99864304,99873091	No	Yes	No	bcc_35680|Cycle_1|Type_1	30,31	99862562,99873091	psi1:0.866666666667,psi2:1.0	C1_13,C2_10	C1_2,C2_0	Yes
ENSG00000170791	CHCHD7	chr8:57127195-57129021	+	altA	44	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,74	57127226,57128948	No	No	No	bcc_56568|Cycle_0|Type_1	31,30	57127226,57128992	psi1:0.188679245283,psi2:0.408163265306	C1_10,C2_20	C1_43,C2_29	Yes
ENSG00000114544	SLC41A3	chr3:125725377-125725985	+	IR	549	No	Yes	protein_coding	no_known_ss	608	-	No	Yes	Yes	bcc_60785|Cycle_9|Type_1	30,29	125725407,125725957	psi1:1.0,psi2:0.923076923077	C1_146,C2_48	C1_0,C2_4	(CT:125725407,AC:125725957)
ENSG00000148660	CAMK2G	chr10:75577281-75581470	-	ES	114	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,114,31	75577312,75579290,75579403,75581440	No	No	No	bcc_56144|Cycle_0|Type_1	31,31	75577312,75581440	psi1:0.655555555556,psi2:0	C1_59,C2_0	C1_31,C2_3	Yes
ENSG00000186575	NF2	chr22:30077560-30090771	+	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,45,31	30077590,30079009,30079053,30090741	No	No	No	bcc_23677|Cycle_0|Type_1	30,31	30077590,30090741	psi1:0.785714285714,psi2:0.555555555556	C1_11,C2_10	C1_3,C2_8	Yes
ENSG00000125124	BBS2	chr16:56536337-56536615	+	IR	216	No	Yes	protein_coding	no_known_ss	278	-	No	No	No	bcc_8709|Cycle_0|Type_1	31,31	56536368,56536585	psi1:0.288888888889,psi2:0	C1_13,C2_0	C1_32,C2_8	(CT:56536368,AC:56536585)
ENSG00000122566	HNRNPA2B1	chr7:26237323-26240221	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,36,30	26237352,26237451,26237486,26240192	No	No	No	bcc_6800|Cycle_0|Type_1	29,30	26237352,26240192	psi1:0.48275862069,psi2:0.23417721519	C1_28,C2_37	C1_30,C2_121	Yes
ENSG00000102580	DNAJC3	chr13:96443552-96443613	-	deletion	3	No	-	protein_coding	no_known_ss	61	96443552	No	No	No	bcc_384|Cycle_0|Type_1	27,31	96443579,96443583	psi1:1.0,psi2:0.584905660377	C1_5,C2_31	C1_0,C2_22	-
ENSG00000214046	SMIM7	chr19:16757582-16757936	+	IR	295	Yes	-	protein_coding	no_known_ss	354	-	No	No	No	bcc_45320|Cycle_0|Type_1	29,30	16757611,16757907	psi1:0.893129770992,psi2:0.99504950495	C1_117,C2_201	C1_14,C2_1	(CT:16757611,AC:16757907)
ENSG00000116560	SFPQ	chr1:35642043-35642950	-	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	32,31	35642075,35642920	No	No	No	bcc_9670|Cycle_3|Type_1	29,31	35642072,35642920	psi1:0.684210526316,psi2:0.9	C1_13,C2_9	C1_6,C2_1	Yes
ENSG00000163444	TMEM183A	chr1:202977909-202984047	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):202984017,202977938	29,31	202977938,202984017	No	No	No	bcc_29805|Cycle_0|Type_1	29,28	202977938,202984020	psi1:0.8,psi2:0.578947368421	C1_16,C2_11	C1_4,C2_8	Yes
ENSG00000132305	IMMT	chr2:86398383-86400802	-	altA	57	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):86398468,86400773	85,30	86398468,86400773	No	Yes	No	bcc_50911|Cycle_2|Type_1	28,30	86398411,86400773	psi1:0.888888888889,psi2:1.0	C1_16,C2_17	C1_2,C2_0	Yes
ENSG00000197043	ANXA6	chr5:150489377-150496717	-	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,18,30	150489407,150490188,150490205,150496688	No	Yes	Yes	bcc_30257|Cycle_0|Type_1	30,30	150489407,150496688	psi1:0.928571428571,psi2:0.748148148148	C1_104,C2_101	C1_8,C2_34	Yes
ENSG00000206053	HN1L	chr16:1735558-1747841	+	ES	143	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,143,29	1735588,1741844,1741986,1747813	No	No	No	bcc_59166|Cycle_0|Type_1	30,29	1735588,1747813	psi1:0.916666666667,psi2:1.0	C1_22,C2_48	C1_2,C2_0	Yes
ENSG00000004487	KDM1A	chr1:23408035-23408813	+	altA	73	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):23408713,23408066	31,101	23408066,23408713	No	No	No	bcc_55063|Cycle_0|Type_1	31,28	23408066,23408786	psi1:0.885714285714,psi2:1.0	C1_31,C2_31	C1_4,C2_0	Yes
ENSG00000134363	FST	chr5:52780092-52780860	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	52780123,52780827	No	No	No	bcc_53586|Cycle_0|Type_1	31,31	52780123,52780830	psi1:1.0,psi2:0.6	C1_1,C2_6	C1_0,C2_4	Yes
ENSG00000165792	METTL17	chr14:21464840-21464970	-	IR	73	Yes	Yes	protein_coding	no_known_ss	130	-	No	Yes	No	bcc_53225|Cycle_0|Type_1	30,27	21464870,21464944	psi1:0.75,psi2:0.5	C1_3,C2_4	C1_1,C2_4	(AG:21464944,GT:21464870)
ENSG00000133318	RTN3	chr11:63449219-63517492	+	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,57,30	63449250,63472323,63472379,63517463	No	No	No	bcc_31632|Cycle_0|Type_1	31,30	63449250,63517463	psi1:0.289855072464,psi2:0	C1_40,C2_0	C1_98,C2_24	(GC:63472379,AG:63517463);(GT:63449250,AG:63517463);(GT:63449250,AG:63472323)
ENSG00000152795	HNRNPDL	chr4:83346007-83347219	-	altAD	1152	No	-	protein_coding	2_ss_annotated_(over_4_ss):83346036,83347190	36,1175	83346043,83346045	No	Yes	No	bcc_30972|Cycle_1|Type_1	29,30	83346036,83347190	psi1:0.5375,psi2:0.774086378738	C1_258,C2_233	C1_222,C2_68	(AC:83347190,CT:83346036);-
ENSG00000100239	PPP6R2	chr22:50874851-50875964	+	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,81,30	50874881,50875417,50875497,50875935	No	No	No	bcc_23992|Cycle_0|Type_1	30,30	50874881,50875935	psi1:0.555555555556,psi2:0.780487804878	C1_25,C2_32	C1_20,C2_9	Yes
ENSG00000136933	RABEPK	chr9:127969969-127990219	+	ES_MULTI	315	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,153,162,31	127970000,127975649,127975801,127982818,127982979,127990189	No	Yes	No	bcc_55928|Cycle_2|Type_1	31,31	127970000,127990189	psi1:0.884615384615,psi2:0.988636363636	C1_23,C2_87	C1_3,C2_1	Yes
ENSG00000137500	CCDC90B	chr11:82985753-82991212	-	ES	104	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,104,29	82985783,82989769,82989872,82991184	No	Yes	No	bcc_50331|Cycle_0|Type_1	30,29	82985783,82991184	psi1:0.979591836735,psi2:0.847826086957	C1_48,C2_39	C1_1,C2_7	Yes
ENSG00000182902	SLC25A18	chr22:18043382-18062541	+	ES	63	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,63,31	18043413,18049989,18050051,18062511	No	Yes	No	bcc_52202|Cycle_10|Type_1	31,31	18043413,18062511	psi1:0.797101449275,psi2:1.0	C1_55,C2_21	C1_14,C2_0	Yes
ENSG00000135018	UBQLN1	chr9:86280029-86284127	-	ES	84	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,84,28	86280060,86281265,86281348,86284100	No	No	No	bcc_41228|Cycle_0|Type_1	31,28	86280060,86284100	psi1:0.970588235294,psi2:0.840425531915	C1_198,C2_79	C1_6,C2_15	Yes
ENSG00000108590	MED31	chr17:6547948-6553706	-	ES	97	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,97,31	6547979,6553302,6553398,6553676	No	No	No	bcc_30364|Cycle_0|Type_1	31,31	6547979,6553676	psi1:0.85,psi2:0.975	C1_17,C2_39	C1_3,C2_1	Yes
ENSG00000213593	TMX2	chr11:57505110-57505856	+	ES	114	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,114,31	57505140,57505385,57505498,57505826	No	Yes	No	bcc_51983|Cycle_1|Type_1	30,31	57505140,57505826	psi1:1.0,psi2:0.894039735099	C1_150,C2_135	C1_0,C2_16	Yes
ENSG00000145687	SSBP2	chr5:80762833-80769549	-	altA	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	51,31	80762884,80769519	No	No	No	bcc_72102|Cycle_0|Type_1	27,31	80762860,80769519	psi1:0.5,psi2:0	C1_8,C2_0	C1_8,C2_1	Yes
ENSG00000272686	RP11-390E23.6	chr7:123390731-123390909	-	IR	118	Yes	-	antisense	no_known_ss	178	-	No	No	No	bcc_71408|Cycle_0|Type_1	29,31	123390760,123390879	psi1:0.833333333333,psi2:1.0	C1_10,C2_5	C1_2,C2_0	(TA:123390879,AG:123390760)
ENSG00000075539	FRYL	chr4:48537815-48542399	-	ES	98	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,98,30	48537844,48541988,48542085,48542370	No	No	No	bcc_59974|Cycle_0|Type_1	29,30	48537844,48542370	psi1:0.666666666667,psi2:1.0	C1_20,C2_4	C1_10,C2_0	Yes
ENSG00000170390	DCLK2	chr4:151119225-151124974	+	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,51,28	151119255,151120180,151120230,151124947	No	No	No	bcc_54581|Cycle_0|Type_1	30,28	151119255,151124947	psi1:0.527777777778,psi2:0	C1_19,C2_0	C1_17,C2_2	Yes
ENSG00000198176	TFDP1	chr13:114277571-114287464	+	ES	122	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,122,30	114277601,114285938,114286059,114287435	No	No	No	bcc_39277|Cycle_0|Type_1	30,30	114277601,114287435	psi1:1.0,psi2:0.85	C1_10,C2_17	C1_0,C2_3	Yes
ENSG00000023287	RB1CC1	chr8:53537317-53540631	-	altD	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,40	53537347,53540592	No	No	No	bcc_32943|Cycle_0|Type_1	30,31	53537347,53540601	psi1:0.46511627907,psi2:0.75	C1_20,C2_9	C1_23,C2_3	Yes
ENSG00000173511	VEGFB	chr11:64004663-64005020	+	altA	101	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,129	64004694,64004892	No	Yes	Yes	bcc_37316|Cycle_0|Type_1	31,28	64004694,64004993	psi1:0.692307692308,psi2:0.884615384615	C1_18,C2_23	C1_8,C2_3	Yes
ENSG00000085224	ATRX	chrX:76944388-76949342	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):76949313,76944420	32,30	76944420,76949313	No	No	No	bcc_59745|Cycle_0|Type_1	29,30	76944417,76949313	psi1:0.764705882353,psi2:1.0	C1_13,C2_4	C1_4,C2_0	Yes
ENSG00000111906	HDDC2	chr6:125614025-125621714	-	ES	103	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,103,31	125614055,125619860,125619962,125621684	No	No	No	bcc_55400|Cycle_0|Type_1	30,31	125614055,125621684	psi1:0.514563106796,psi2:0.884615384615	C1_106,C2_23	C1_100,C2_3	Yes
ENSG00000139508	SLC46A3	chr13:29275064-29275668	-	IR	544	Yes	Yes	protein_coding	no_known_ss	604	-	No	Yes	No	bcc_40788|Cycle_2|Type_1	29,31	29275093,29275638	psi1:0.8,psi2:0.972508591065	C1_20,C2_283	C1_5,C2_8	Yes
ENSG00000062194	GPBP1	chr5:56472196-56526703	+	ES_MULTI	141	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,120,21,31	56472227,56509901,56510020,56517203,56517223,56526673	No	Yes	No	bcc_16024|Cycle_2|Type_1	31,31	56472227,56526673	psi1:0.847826086957,psi2:1.0	C1_39,C2_22	C1_7,C2_0	Yes
ENSG00000205670	SMIM11	chr21:35751786-35772035	+	ES	167	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,167,27	35751815,35757776,35757942,35772009	No	Yes	No	bcc_16236|Cycle_0|Type_1	29,27	35751815,35772009	psi1:0.891891891892,psi2:1.0	C1_33,C2_34	C1_4,C2_0	Yes
ENSG00000175061	FAM211A-AS1	chr17:16342697-16343528	+	ES	44	Yes	-	processed_transcript	all_splice_sites_known_(4_ss)	31,44,30	16342728,16342974,16343017,16343499	No	Yes	No	bcc_27470|Cycle_3|Type_1	31,30	16342728,16343499	psi1:0.488888888889,psi2:0.247787610619	C1_22,C2_28	C1_23,C2_85	Yes
ENSG00000136450	SRSF1	chr17:56082371-56083192	-	ES	187	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,187,31	56082402,56082775,56082961,56083162	No	Yes	No	bcc_5527|Cycle_1|Type_1	31,31	56082402,56083162	psi1:0.885057471264,psi2:1.0	C1_77,C2_70	C1_10,C2_0	Yes
ENSG00000141627	DYM	chr18:46623854-46690084	-	ES	183	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,183,30	46623885,46645114,46645296,46690055	No	No	No	bcc_29578|Cycle_0|Type_1	31,30	46623885,46690055	psi1:0.897435897436,psi2:1.0	C1_35,C2_40	C1_4,C2_0	Yes
ENSG00000068796	KIF2A	chr5:61683564-61683625	-	deletion	3	No	-	protein_coding	no_known_ss	61	61683564	No	No	No	bcc_9640|Cycle_0|Type_1	27,31	61683591,61683595	psi1:0.34375,psi2:1.0	C1_11,C2_1	C1_21,C2_0	-
ENSG00000129158	SERGEF	chr11:17899762-18010174	-	ES	167	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,167,31	17899791,17981017,17981183,18010144	No	No	No	bcc_58863|Cycle_1|Type_1	29,31	17899791,18010144	psi1:0.6875,psi2:1.0	C1_33,C2_7	C1_15,C2_0	Yes
ENSG00000166140	ZFYVE19	chr15:41102924-41105564	+	ES	204	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,204,29	41102955,41104897,41105100,41105536	No	No	No	bcc_66842|Cycle_0|Type_1	31,29	41102955,41105536	psi1:0.764705882353,psi2:0.928571428571	C1_13,C2_26	C1_4,C2_2	Yes
ENSG00000100348	TXN2	chr22:36876805-36877641	-	altA	50	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	79,31	36876884,36877611	No	No	No	bcc_44500|Cycle_0|Type_1	29,31	36876834,36877611	psi1:1.0,psi2:0.882352941176	C1_26,C2_30	C1_0,C2_4	Yes
ENSG00000007341	ST7L	chr1:113153594-113161561	-	ES	83	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,83,31	113153625,113159435,113159517,113161531	No	Yes	No	bcc_71140|Cycle_2|Type_1	31,31	113153625,113161531	psi1:0.866666666667,psi2:1.0	C1_13,C2_9	C1_2,C2_0	Yes
ENSG00000133195	SLC39A11	chr17:70845914-70943921	-	altD	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,52	70845943,70943870	No	No	No	bcc_70472|Cycle_0|Type_1	29,31	70845943,70943891	psi1:0.4,psi2:0.181818181818	C1_2,C2_2	C1_3,C2_9	(AC:70943891,CT:70845943);(GC:70943870,CT:70845943)
ENSG00000172922	RNASEH2C	chr11:65486215-65486373	+	IR	97	Yes	Yes	protein_coding	no_known_ss	158	-	No	No	No	bcc_59548|Cycle_0|Type_1	31,30	65486246,65486344	psi1:0.866666666667,psi2:1.0	C1_13,C2_9	C1_2,C2_0	Yes
ENSG00000116001	TIA1	chr2:70443601-70444048	-	altD	133	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,164	70443631,70443885	No	No	No	bcc_36219|Cycle_0|Type_1	30,31	70443631,70444018	psi1:0.64,psi2:0.4	C1_16,C2_6	C1_9,C2_9	Yes
ENSG00000135525	MAP7	chr6:136693735-136698923	-	altA	24	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):136693763,136698893	52,31	136693787,136698893	No	No	No	bcc_17337|Cycle_0|Type_1	28,31	136693763,136698893	psi1:0.217391304348,psi2:0	C1_5,C2_0	C1_18,C2_6	Yes
ENSG00000169629	RGPD8	chr2:113170175-113175291	-	ES	146	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,146,31	113170203,113174770,113174915,113175261	Yes	No	No	bcc_4492|Cycle_9|Type_1	28,31	113170203,113175261	psi1:0.821428571429,psi2:1.0	C1_23,C2_10	C1_5,C2_0	Yes
ENSG00000183054	RGPD6	chr2:111315596-111320710	-	ES	146	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,146,31	111315624,111320189,111320334,111320680	Yes	No	No	bcc_4492|Cycle_9|Type_1	28,31	111315624,111320680	psi1:0.821428571429,psi2:1.0	C1_23,C2_10	C1_5,C2_0	Yes
ENSG00000015568	RGPD5	chr2:110565950-110571064	+	ES	146	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,146,28	110565981,110566327,110566472,110571037	Yes	No	No	bcc_4492|Cycle_9|Type_1	31,28	110565981,110571037	psi1:0.821428571429,psi2:1.0	C1_23,C2_10	C1_5,C2_0	Yes
ENSG00000158290	CUL4B	chrX:119670858-119672009	-	altD	6	No	-	protein_coding	2_ss_annotated_(over_3_ss):119670889,119671979	31,37	119670889,119671973	No	No	No	bcc_34791|Cycle_0|Type_1	31,31	119670889,119671979	psi1:0.125,psi2:0	C1_3,C2_0	C1_21,C2_16	Yes
ENSG00000100227	POLDIP3	chr22:42981943-42987990	-	ES	67	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,67,30	42981974,42983512,42983578,42987961	No	No	No	bcc_15686|Cycle_0|Type_1	31,30	42981974,42987961	psi1:1.0,psi2:0.909090909091	C1_29,C2_20	C1_0,C2_2	Yes
ENSG00000132522,ENSG00000261915	GPS2,RP11-542C16.2	chr17:7216385-7216561	-	altA	27	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	58,31	7216443,7216531	No	No	No	bcc_40259|Cycle_0|Type_1	31,31	7216416,7216531	psi1:1.0,psi2:0.878787878788	C1_23,C2_29	C1_0,C2_4	Yes
ENSG00000256591,ENSG00000167985	RP11-286N22.8,SDHAF2	chr11:61197624-61213442	+	ES_MULTI	334	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(6_ss)	30,224,110,30	61197654,61205097,61205320,61205476,61205585,61213413	No	No	No	bcc_50622|Cycle_0|Type_1	30,30	61197654,61213413	psi1:0.9,psi2:1.0	C1_90,C2_104	C1_10,C2_0	Yes
ENSG00000140181	HERC2P2	chr15:23283124-23285735	-	altA	263	Yes	-	pseudogene	all_splice_sites_known_(3_ss)	292,31	23283416,23285705	No	Yes	No	bcc_25736|Cycle_14|Type_1	29,31	23283153,23285705	psi1:0.896551724138,psi2:0.714285714286	C1_26,C2_10	C1_3,C2_4	Yes
ENSG00000089280	FUS	chr16:31193954-31195212	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	31193985,31195179	No	No	No	bcc_35153|Cycle_0|Type_1	31,31	31193985,31195182	psi1:0.58064516129,psi2:0.842105263158	C1_36,C2_16	C1_26,C2_3	Yes
ENSG00000102181	CD99L2	chrX:149938811-149944676	-	ES	18	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):149938842,149944647	31,18,30	149938842,149940278,149940295,149944647	No	No	No	bcc_53606|Cycle_0|Type_1	31,30	149938842,149944647	psi1:0.230769230769,psi2:0	C1_12,C2_0	C1_40,C2_12	Yes
ENSG00000112357	PEX7	chr6:137167288-137219308	+	ES_MULTI	277	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,107,114,56,29	137167319,137187765,137187871,137191028,137191141,137193336,137193391,137219280	No	No	No	bcc_24097|Cycle_1|Type_1	31,29	137167319,137219280	psi1:1.0,psi2:0.913043478261	C1_33,C2_21	C1_0,C2_2	Yes
ENSG00000138069	RAB1A	chr2:65316173-65325135	-	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,96,31	65316204,65318117,65318212,65325105	No	Yes	No	bcc_33706|Cycle_2|Type_1	31,31	65316204,65325105	psi1:0.891803278689,psi2:0.996805111821	C1_272,C2_312	C1_33,C2_1	Yes
ENSG00000155329	ZCCHC10	chr5:132342581-132362219	-	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,66,31	132342612,132358533,132358598,132362189	No	No	No	bcc_17570|Cycle_0|Type_1	31,31	132342612,132362189	psi1:1.0,psi2:0.823529411765	C1_6,C2_14	C1_0,C2_3	Yes
ENSG00000132664	POLR3F	chr20:18455802-18461076	+	ES	144	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,144,31	18455831,18460682,18460825,18461046	No	No	No	bcc_59827|Cycle_0|Type_1	29,31	18455831,18461046	psi1:0.866666666667,psi2:1.0	C1_26,C2_17	C1_4,C2_0	Yes
ENSG00000175110	MRPS22	chr3:139063009-139065752	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	139063040,139065720	No	No	No	bcc_1805|Cycle_0|Type_1	31,30	139063040,139065723	psi1:1.0,psi2:0.75	C1_4,C2_15	C1_0,C2_5	Yes
ENSG00000083099	LYRM2	chr6:90347042-90347490	-	altD	17	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,47	90347072,90347444	No	No	No	bcc_16836|Cycle_0|Type_1	30,30	90347072,90347461	psi1:0.470588235294,psi2:0.25	C1_8,C2_4	C1_9,C2_12	Yes
ENSG00000172667	ZMAT3	chr3:178742985-178745241	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	178743016,178745211	No	No	No	bcc_68638|Cycle_0|Type_1	28,31	178743013,178745211	psi1:0.459016393443,psi2:1.0	C1_28,C2_3	C1_33,C2_0	Yes
ENSG00000105171	POP4	chr19:30099585-30102797	+	ES	224	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,224,29	30099616,30101316,30101539,30102769	No	No	No	bcc_58769|Cycle_0|Type_1	31,29	30099616,30102769	psi1:0.909090909091,psi2:1.0	C1_20,C2_27	C1_2,C2_0	Yes
ENSG00000133265	HSPBP1	chr19:55776708-55777284	-	altA	22	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	49,31	55776757,55777254	No	No	No	bcc_5343|Cycle_0|Type_1	27,31	55776735,55777254	psi1:0.954545454545,psi2:0.8125	C1_21,C2_13	C1_1,C2_3	Yes
ENSG00000151498	ACAD8	chr11:134126511-134128439	+	ES	170	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,170,31	134126542,134126982,134127151,134128409	No	No	No	bcc_40516|Cycle_0|Type_1	31,31	134126542,134128409	psi1:0.8125,psi2:0.954545454545	C1_13,C2_21	C1_3,C2_1	Yes
ENSG00000101310	SEC23B	chr20:18488585-18491494	+	altD	18	No	-	protein_coding	all_splice_sites_known_(3_ss)	49,29	18488634,18491466	No	No	No	bcc_54218|Cycle_0|Type_1	31,29	18488616,18491466	psi1:0.466666666667,psi2:0	C1_7,C2_0	C1_8,C2_1	Yes
ENSG00000138670	RASGEF1B	chr4:82369406-82377835	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	82369438,82377805	No	No	No	bcc_6056|Cycle_0|Type_1	29,31	82369435,82377805	psi1:0,psi2:0.241379310345	C1_0,C2_7	C1_6,C2_22	Yes
ENSG00000068305	MEF2A	chr15:100230602-100246964	+	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,24,31	100230633,100243567,100243590,100246934	No	No	No	bcc_15954|Cycle_1|Type_1	31,31	100230633,100246934	psi1:0.620689655172,psi2:0	C1_18,C2_0	C1_11,C2_1	Yes
ENSG00000104067	TJP1	chr15:29993862-29996453	-	altD	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,49	29993893,29996405	No	Yes	No	bcc_14201|Cycle_1|Type_1	31,28	29993893,29996426	psi1:0.818181818182,psi2:0.590909090909	C1_9,C2_13	C1_2,C2_9	Yes
ENSG00000170471	RALGAPB	chr20:37191312-37194029	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,31	37191340,37193999	No	No	No	bcc_50747|Cycle_0|Type_1	28,28	37191340,37194002	psi1:0.466666666667,psi2:0.166666666667	C1_14,C2_1	C1_16,C2_5	Yes
ENSG00000123562	MORF4L2	chrX:102933498-102940128	-	ES_altA	100	Yes	-	protein_coding	all_splice_sites_known_(5_ss)	81,49,30	102933579,102939609,102939657,102940099	No	Yes	No	bcc_30877|Cycle_9|Type_1	30,30	102933528,102940099	psi1:0.51724137931,psi2:0.275	C1_45,C2_11	C1_42,C2_29	Yes
ENSG00000123562	MORF4L2	chrX:102933548-102940129	-	ES	49	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,49,31	102933579,102939609,102939657,102940099	No	Yes	No	bcc_30877|Cycle_11|Type_1	31,31	102933579,102940099	psi1:0.65306122449,psi2:0.424242424242	C1_32,C2_14	C1_17,C2_19	Yes
ENSG00000157087	ATP2B2	chr3:10370780-10379888	-	ES_MULTI	227	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,55,172,29	10370809,10373667,10373721,10377813,10377984,10379860	No	No	No	bcc_8544|Cycle_1|Type_1	29,29	10370809,10379860	psi1:0.466666666667,psi2:0.222222222222	C1_21,C2_4	C1_24,C2_14	Yes
ENSG00000182872	RBM10	chrX:47032565-47035925	+	ES	74	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,74,27	47032596,47034418,47034491,47035899	No	No	No	bcc_68575|Cycle_0|Type_1	31,27	47032596,47035899	psi1:0.866666666667,psi2:1.0	C1_13,C2_8	C1_2,C2_0	Yes
ENSG00000141076	CIRH1A	chr16:69200999-69202815	+	altAD	123	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):69201088,69202724	89,92	69201088,69202724	No	No	No	bcc_46798|Cycle_0|Type_1	27,31	69201026,69202785	psi1:0.928571428571,psi2:1.0	C1_26,C2_64	C1_2,C2_0	(GT:69201088,AG:69202724);(AT:69201026,GG:69202785)
ENSG00000141867	BRD4	chr19:15348346-15348516	+	IR	108	No	-	protein_coding	no_known_ss	170	-	No	Yes	No	bcc_12423|Cycle_1|Type_1	31,31	15348377,15348486	psi1:0.84375,psi2:1.0	C1_27,C2_13	C1_5,C2_0	(CT:15348377,AC:15348486)
ENSG00000166797	FAM96A	chr15:64367706-64380916	-	ES	50	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,50,31	64367736,64373301,64373350,64380886	No	No	No	bcc_18083|Cycle_0|Type_1	30,31	64367736,64380886	psi1:0.434782608696,psi2:0.786821705426	C1_10,C2_203	C1_13,C2_55	Yes
ENSG00000118418	HMGN3	chr6:79911843-79912023	+	IR	120	No	Yes	protein_coding	no_known_ss	180	-	No	Yes	No	bcc_33987|Cycle_2|Type_1	29,31	79911872,79911993	psi1:0.883720930233,psi2:0.7	C1_38,C2_14	C1_5,C2_6	(CT:79911872,AC:79911993)
ENSG00000099622	CIRBP	chr19:1269379-1270956	+	IR	61	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,91	-	No	No	No	bcc_32387|Cycle_0|Type_1	27,3,30	1269406,1270879,1270881,1270927	psi1:0.224242424242,psi2:0.0327868852459	C1_37,C2_2	C1_128,C2_59	Yes
ENSG00000182902	SLC25A18	chr22:18043371-18062537	+	ES_altAD	63	No	-	protein_coding	3_ss_annotated_(over_6_ss):18049989,18062511,18050051	31,63,27	18043402,18049989,18050051,18062511	No	Yes	No	bcc_52202|Cycle_2|Type_1	24,34	18043395,18062504	psi1:0.860465116279,psi2:1.0	C1_37,C2_21	C1_6,C2_0	(GT:18050051,AG:18062511);(GC:18043402,AG:18049989);(CT:18043395,AC:18062504)
ENSG00000119725	ZNF410	chr14:74360604-74363079	+	altA	32	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,61	74360635,74363019	No	No	No	bcc_33923|Cycle_0|Type_1	31,29	74360635,74363051	psi1:0.928571428571,psi2:0.769230769231	C1_13,C2_10	C1_1,C2_3	Yes
ENSG00000112701	SENP6	chr6:76344496-76357457	+	unclassified	3	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,21,11	76344527,76350400,76350420,76357447	No	No	No	bcc_40319|Cycle_0|Type_1	31,18,11	76344527,76350403,76350420,76357447	psi1:0.588235294118,psi2:0.333333333333	C1_10,C2_2	C1_7,C2_4	Yes
ENSG00000181929	PRKAG1	chr12:49399297-49406875	-	ES	110	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,110,31	49399326,49399526,49399635,49406845	No	No	No	bcc_47077|Cycle_1|Type_1	29,31	49399326,49406845	psi1:0.925925925926,psi2:1.0	C1_25,C2_52	C1_2,C2_0	Yes
ENSG00000164896	FASTK	chr7:150775759-150776040	-	altD	81	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,112	150775788,150775929	No	No	No	bcc_50782|Cycle_1|Type_1	29,31	150775788,150776010	psi1:1.0,psi2:0.8	C1_4,C2_12	C1_0,C2_3	Yes
ENSG00000102401	ARMCX3	chrX:100878236-100878831	+	altA	28	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,56	100878266,100878776	No	No	No	bcc_44998|Cycle_0|Type_1	30,28	100878266,100878804	psi1:0.6,psi2:0.375	C1_6,C2_3	C1_4,C2_5	Yes
ENSG00000151332	MBIP	chr14:36769998-36780809	-	ES	98	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,98,31	36770029,36777298,36777395,36780779	No	No	No	bcc_46760|Cycle_0|Type_1	31,31	36770029,36780779	psi1:1.0,psi2:0.90625	C1_33,C2_29	C1_0,C2_3	Yes
ENSG00000108924	HLF	chr17:53392777-53398053	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	53392808,53398022	No	No	No	bcc_65846|Cycle_0|Type_1	31,29	53392808,53398025	psi1:0.047619047619,psi2:0.1875	C1_1,C2_3	C1_20,C2_13	Yes
ENSG00000137955	RABGGTB	chr1:76253258-76255667	+	ES	198	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,198,31	76253289,76254844,76255041,76255637	No	No	No	bcc_54266|Cycle_0|Type_1	31,31	76253289,76255637	psi1:0.91,psi2:1.0	C1_91,C2_111	C1_9,C2_0	Yes
ENSG00000113597	TRAPPC13	chr5:64957946-64960090	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,30	64957977,64960061	No	No	No	bcc_10902|Cycle_0|Type_1	31,27	64957977,64960064	psi1:0.529411764706,psi2:0.285714285714	C1_9,C2_2	C1_8,C2_5	Yes
ENSG00000143457	GOLPH3L	chr1:150621194-150636136	-	ES	115	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,115,29	150621224,150634290,150634404,150636108	No	No	No	bcc_62167|Cycle_0|Type_1	30,29	150621224,150636108	psi1:0.777777777778,psi2:1.0	C1_14,C2_4	C1_4,C2_0	Yes
ENSG00000071054	MAP4K4	chr2:102486847-102490137	+	ES	192	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,192,29	102486877,102487956,102488147,102490109	No	No	No	bcc_13172|Cycle_0|Type_1	30,29	102486877,102490109	psi1:0.447058823529,psi2:0.7	C1_38,C2_21	C1_47,C2_9	Yes
ENSG00000126777	KTN1	chr14:56117105-56118635	+	ES	69	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,69,28	56117136,56117287,56117355,56118608	No	No	No	bcc_29722|Cycle_0|Type_1	31,28	56117136,56118608	psi1:0.910112359551,psi2:1.0	C1_81,C2_98	C1_8,C2_0	Yes
ENSG00000132561	MATN2	chr8:99044514-99045354	+	altA	57	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,85	99044545,99045270	No	No	No	bcc_41999|Cycle_0|Type_1	31,28	99044545,99045327	psi1:0.238095238095,psi2:0.454545454545	C1_5,C2_5	C1_16,C2_6	Yes
ENSG00000170852	KBTBD2	chr7:32914738-32919342	-	altD	266	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,296	32914769,32919047	No	No	No	bcc_39629|Cycle_0|Type_1	31,30	32914769,32919313	psi1:0.981132075472,psi2:0.875	C1_52,C2_21	C1_1,C2_3	Yes
ENSG00000110514	MADD	chr11:47317089-47317478	+	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	41,31	47317130,47317448	No	No	No	bcc_54685|Cycle_0|Type_1	29,31	47317118,47317448	psi1:0.0810810810811,psi2:0.333333333333	C1_3,C2_1	C1_34,C2_2	Yes
ENSG00000145349	CAMK2D	chr4:114430800-114434513	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,30	114430831,114434484	No	No	No	bcc_10664|Cycle_0|Type_1	28,30	114430828,114434484	psi1:0.826923076923,psi2:1.0	C1_43,C2_17	C1_9,C2_0	Yes
ENSG00000099783	HNRNPM	chr19:8530216-8530392	-	IR	117	No	Yes	protein_coding	no_known_ss	176	-	No	No	No	bcc_24035|Cycle_0|Type_1	30,29	8530246,8530364	psi1:0.763636363636,psi2:0.528571428571	C1_168,C2_37	C1_52,C2_33	(AG:8530364,GT:8530246)
ENSG00000135047	CTSL	chr9:90341139-90342537	+	altD	145	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	174,29	90341313,90342509	No	Yes	No	bcc_52159|Cycle_6|Type_1	29,29	90341168,90342509	psi1:0.307692307692,psi2:0.593220338983	C1_4,C2_35	C1_9,C2_24	Yes
ENSG00000132823	OSER1	chr20:42826350-42835547	-	ES	114	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,114,27	42826379,42831601,42831714,42835521	No	No	No	bcc_44064|Cycle_0|Type_1	29,27	42826379,42835521	psi1:0.971428571429,psi2:0.85	C1_68,C2_17	C1_2,C2_3	Yes
ENSG00000105983	LMBR1	chr7:156476827-156516835	-	ES	162	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,162,30	156476857,156480724,156480885,156516806	No	No	No	bcc_38802|Cycle_0|Type_1	30,30	156476857,156516806	psi1:0.790697674419,psi2:0.95652173913	C1_34,C2_22	C1_9,C2_1	Yes
ENSG00000197451	HNRNPAB	chr5:177636422-177637584	+	ES	141	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	26,141,31	177636448,177637133,177637273,177637554	No	No	No	bcc_42130|Cycle_0|Type_1	26,31	177636448,177637554	psi1:0.587301587302,psi2:0.795081967213	C1_37,C2_97	C1_26,C2_25	Yes
ENSG00000079819	EPB41L2	chr6:131184830-131206265	-	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,99,30	131184858,131186676,131186774,131206236	No	Yes	No	bcc_46240|Cycle_24|Type_1	28,30	131184858,131206236	psi1:0.768115942029,psi2:1.0	C1_53,C2_14	C1_16,C2_0	Yes
ENSG00000132423	COQ3	chr6:99819434-99825290	-	ES	243	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,243,29	99819463,99823816,99824058,99825262	No	Yes	No	bcc_15225|Cycle_0|Type_1	29,29	99819463,99825262	psi1:0.978260869565,psi2:0.869565217391	C1_45,C2_20	C1_1,C2_3	Yes
ENSG00000071626	DAZAP1	chr19:1432658-1434768	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	1432689,1434736	No	Yes	No	bcc_50252|Cycle_1|Type_1	31,30	1432689,1434739	psi1:0.5,psi2:0.857142857143	C1_1,C2_30	C1_1,C2_5	Yes
ENSG00000137073	UBAP2	chr9:33963759-33986788	-	ES_MULTI	159	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,104,55,31	33963789,33971649,33971752,33973181,33973235,33986758	No	Yes	No	bcc_58754|Cycle_3|Type_1	30,31	33963789,33986758	psi1:0.84,psi2:1.0	C1_21,C2_9	C1_4,C2_0	Yes
ENSG00000117143	UAP1	chr1:162560270-162567612	+	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,48,31	162560301,162562525,162562572,162567582	No	Yes	No	bcc_4305|Cycle_2|Type_1	31,31	162560301,162567582	psi1:0.6,psi2:0.858974358974	C1_6,C2_67	C1_4,C2_11	Yes
ENSG00000258539,ENSG00000189319	RP11-12J10.3,FAM53B	chr10:126370918-126395235	-	ES	55	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,55,31	126370948,126384727,126384781,126395205	No	No	No	bcc_76510|Cycle_0|Type_1	30,31	126370948,126395205	psi1:0.714285714286,psi2:1.0	C1_15,C2_3	C1_6,C2_0	Yes
ENSG00000197070	ARRDC1	chr9:140508190-140508620	+	altA	108	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,137	140508221,140508484	No	No	No	bcc_73181|Cycle_0|Type_1	31,29	140508221,140508592	psi1:1.0,psi2:0.714285714286	C1_2,C2_10	C1_0,C2_4	Yes
ENSG00000011243	AKAP8L	chr19:15514336-15514499	-	IR	102	No	Yes	protein_coding	no_known_ss	163	-	No	No	No	bcc_64482|Cycle_0|Type_1	30,31	15514366,15514469	psi1:0.962962962963,psi2:0.833333333333	C1_78,C2_20	C1_3,C2_4	Yes
ENSG00000137073	UBAP2	chr9:33963759-33986788	-	ES_MULTI	142	Yes	Yes	protein_coding	5_ss_annotated_(over_6_ss):33971649,33986758,33963789,33973235,33973181	30,87,55,31	33963789,33971649,33971735,33973181,33973235,33986758	No	Yes	No	bcc_58754|Cycle_2|Type_1	30,31	33963789,33986758	psi1:0.8,psi2:1.0	C1_16,C2_5	C1_4,C2_0	Yes
ENSG00000100379	KCTD17	chr22:37455447-37458594	+	ES	91	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,91,30	37455478,37457579,37457669,37458565	No	No	No	bcc_56054|Cycle_0|Type_1	31,30	37455478,37458565	psi1:0.571428571429,psi2:1.0	C1_8,C2_1	C1_6,C2_0	Yes
ENSG00000177058	SLC38A9	chr5:54922458-54929612	-	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,90,31	54922487,54923719,54923808,54929582	No	No	No	bcc_48537|Cycle_0|Type_1	29,31	54922487,54929582	psi1:1.0,psi2:0.666666666667	C1_2,C2_12	C1_0,C2_6	Yes
ENSG00000163486	SRGAP2	chr1:206566999-206574813	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):206574780,206567030	31,34	206567030,206574780	Yes	No	No	bcc_108|Cycle_0|Type_1	31,31	206567030,206574783	psi1:0.542857142857,psi2:0.8	C1_19,C2_8	C1_16,C2_2	Yes
ENSG00000171943	SRGAP2C	chr1:121116784-121124595	+	altA	3	No	-	pseudogene	2_ss_annotated_(over_3_ss):121124562,121116815	31,34	121116815,121124562	Yes	No	No	bcc_108|Cycle_0|Type_1	31,31	121116815,121124565	psi1:0.542857142857,psi2:0.8	C1_19,C2_8	C1_16,C2_2	Yes
ENSG00000183077	AFMID	chr17:76198801-76202057	+	ES_MULTI	250	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,73,98,79,31	76198832,76200909,76200981,76201174,76201271,76201521,76201599,76202027	No	Yes	Yes	bcc_3143|Cycle_112|Type_1	31,31	76198832,76202027	psi1:0.333333333333,psi2:0.604166666667	C1_4,C2_29	C1_8,C2_19	Yes
ENSG00000196547	MAN2A2	chr15:91455863-91456193	+	altA	58	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):91456107,91455894	31,87	91455894,91456107	No	No	No	bcc_61995|Cycle_0|Type_1	31,29	91455894,91456165	psi1:1.0,psi2:0.896551724138	C1_22,C2_26	C1_0,C2_3	Yes
ENSG00000010295	IFFO1	chr12:6657294-6657618	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,28	6657326,6657591	No	No	No	bcc_66759|Cycle_0|Type_1	29,28	6657323,6657591	psi1:0.782608695652,psi2:1.0	C1_18,C2_5	C1_5,C2_0	Yes
ENSG00000138606	SHF	chr15:45464172-45467446	-	ES	170	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,170,30	45464200,45464347,45464516,45467417	No	No	No	bcc_66637|Cycle_0|Type_1	28,30	45464200,45467417	psi1:0.8,psi2:0.941176470588	C1_8,C2_16	C1_2,C2_1	Yes
ENSG00000125944	HNRNPR	chr1:23650196-23664276	-	ES	114	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,114,30	23650225,23660011,23660124,23664247	No	No	No	bcc_33438|Cycle_0|Type_1	29,30	23650225,23664247	psi1:0.870967741935,psi2:1.0	C1_108,C2_62	C1_16,C2_0	Yes
ENSG00000203875	SNHG5	chr6:86387179-86387699	-	ES	81	No	-	processed_transcript	all_splice_sites_known_(4_ss)	31,81,28	86387210,86387513,86387593,86387672	No	No	No	bcc_47044|Cycle_0|Type_1	31,28	86387210,86387672	psi1:0.845,psi2:0.967032967033	C1_169,C2_264	C1_31,C2_9	Yes
ENSG00000214135	AC024560.3	chr3:197348710-197350121	-	ES	144	No	-	pseudogene	all_splice_sites_known_(4_ss)	29,144,31	197348739,197349058,197349201,197350091	No	Yes	No	bcc_6949|Cycle_5|Type_1	29,31	197348739,197350091	psi1:0.915492957746,psi2:1.0	C1_65,C2_81	C1_6,C2_0	Yes
ENSG00000029725	RABEP1	chr17:5281496-5284712	+	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,99,29	5281527,5283659,5283757,5284684	No	No	No	bcc_12384|Cycle_0|Type_1	31,29	5281527,5284684	psi1:0.930555555556,psi2:0.764705882353	C1_67,C2_13	C1_5,C2_4	Yes
ENSG00000136247	ZDHHC4	chr7:6618320-6621268	+	ES	124	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,124,31	6618351,6620186,6620309,6621238	No	No	No	bcc_39792|Cycle_3|Type_1	31,31	6618351,6621238	psi1:0.847826086957,psi2:0.974358974359	C1_39,C2_38	C1_7,C2_1	Yes
ENSG00000179262	RAD23A	chr19:13059942-13060117	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,29	13059973,13060089	No	No	No	bcc_678|Cycle_0|Type_1	31,26	13059973,13060092	psi1:0.5,psi2:0.714285714286	C1_14,C2_15	C1_14,C2_6	Yes
ENSG00000108799	EZH1	chr17:40876403-40879683	-	altA	10	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):40876442,40879653	39,31	40876442,40879653	No	No	No	bcc_51238|Cycle_0|Type_1	29,31	40876432,40879653	psi1:0.823529411765,psi2:1.0	C1_14,C2_5	C1_3,C2_0	Yes
ENSG00000090621	PABPC4	chr1:40029564-40030172	-	altD	48	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,78	40029594,40030095	No	Yes	No	bcc_39244|Cycle_1|Type_1	30,30	40029594,40030143	psi1:1.0,psi2:0.736842105263	C1_3,C2_14	C1_0,C2_5	Yes
ENSG00000100461	RBM23	chr14:23374632-23375434	-	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,54,31	23374662,23374815,23374868,23375404	No	No	No	bcc_15910|Cycle_1|Type_1	30,31	23374662,23375404	psi1:0.823529411765,psi2:1.0	C1_14,C2_5	C1_3,C2_0	Yes
ENSG00000155189	AGPAT5	chr8:6590141-6612602	+	ES_MULTI	250	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,91,159,31	6590171,6599182,6599272,6605191,6605349,6612572	No	No	No	bcc_48629|Cycle_0|Type_1	30,31	6590171,6612572	psi1:0.981481481481,psi2:0.88	C1_53,C2_22	C1_1,C2_3	Yes
ENSG00000013561	RNF14	chr5:141353276-141359717	+	ES	528	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,528,30	141353307,141357868,141358395,141359688	No	Yes	No	bcc_50866|Cycle_2|Type_1	31,30	141353307,141359688	psi1:0.934782608696,psi2:1.0	C1_43,C2_104	C1_3,C2_0	Yes
ENSG00000179912	R3HDM2	chr12:57696971-57704077	-	ES	24	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):57697000,57704047	29,24,31	57697000,57699423,57699446,57704047	No	No	No	bcc_22796|Cycle_0|Type_1	29,31	57697000,57704047	psi1:0.24,psi2:0.454545454545	C1_6,C2_5	C1_19,C2_6	Yes
ENSG00000265590,ENSG00000159079	AP000275.65,C21orf59	chr21:33974252-33975499	-	ES	96	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,96,29	33974283,33974582,33974677,33975471	No	No	No	bcc_32398|Cycle_0|Type_1	31,29	33974283,33975471	psi1:0.816901408451,psi2:0.954545454545	C1_58,C2_63	C1_13,C2_3	Yes
ENSG00000197586	ENTPD6	chr20:25204762-25205870	+	altA	43	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,73	25204793,25205798	No	No	No	bcc_59627|Cycle_0|Type_1	31,30	25204793,25205841	psi1:0.306451612903,psi2:0.583333333333	C1_19,C2_7	C1_43,C2_5	Yes
ENSG00000101247	NDUFAF5	chr20:13769267-13773854	+	altA	20	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,49	13769298,13773806	No	No	No	bcc_60016|Cycle_0|Type_1	31,29	13769298,13773826	psi1:0.315789473684,psi2:0.133333333333	C1_6,C2_2	C1_13,C2_13	Yes
ENSG00000078674	PCM1	chr8:17851099-17863800	+	altA	12	No	-	protein_coding	2_ss_annotated_(over_3_ss):17851128,17863772	29,41	17851128,17863760	No	No	No	bcc_32451|Cycle_0|Type_1	29,29	17851128,17863772	psi1:0.133333333333,psi2:0.315789473684	C1_2,C2_6	C1_13,C2_13	Yes
ENSG00000117523	PRRC2C	chr1:171557613-171560755	+	ES	53	Yes	Yes	protein_coding	3_ss_annotated_(over_4_ss):171560291,171557644,171560726	31,53,30	171557644,171560291,171560343,171560726	No	No	No	bcc_7794|Cycle_0|Type_1	31,30	171557644,171560726	psi1:0.961538461538,psi2:0.833333333333	C1_25,C2_20	C1_1,C2_4	Yes
ENSG00000145907	G3BP1	chr5:151151569-151166192	+	altA	31	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	28,60	151151597,151166133	No	No	No	bcc_28701|Cycle_0|Type_1	28,29	151151597,151166164	psi1:0.740740740741,psi2:0.923076923077	C1_20,C2_12	C1_7,C2_1	Yes
ENSG00000110514	MADD	chr11:47346097-47350238	+	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,70,30	47346128,47348289,47348358,47350209	No	Yes	No	bcc_54676|Cycle_0|Type_1	31,30	47346128,47350209	psi1:0.586206896552,psi2:0.888888888889	C1_34,C2_8	C1_24,C2_1	Yes
ENSG00000131503,ENSG00000254996	ANKHD1,ANKHD1-EIF4EBP3	chr5:139917789-139918534	+	altD	27	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	57,31	139917846,139918504	No	No	No	bcc_38277|Cycle_0|Type_1	30,31	139917819,139918504	psi1:0.708333333333,psi2:0.878787878788	C1_17,C2_29	C1_7,C2_4	(GT:139917846,AG:139918504);(GC:139917819,AG:139918504)
ENSG00000118418	HMGN3	chr6:79911414-79913327	-	ES	114	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,114,31	79911443,79911993,79912106,79913297	No	Yes	No	bcc_33987|Cycle_32|Type_1	29,31	79911443,79913297	psi1:1.0,psi2:0.909090909091	C1_100,C2_100	C1_0,C2_10	Yes
ENSG00000234545	FAM133B	chr7:92206501-92207493	-	unclassified	41	Yes	Yes	protein_coding	all_splice_sites_known_(5_ss)	8,63,30	92206509,92206969,92207031,92207464	No	No	No	bcc_24967|Cycle_0|Type_1	8,22,30	92206509,92206969,92206990,92207464	psi1:0.875,psi2:1.0	C1_14,C2_8	C1_2,C2_0	Yes
ENSG00000054523	KIF1B	chr1:10332333-10335515	+	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,18,30	10332364,10333072,10333089,10335486	No	No	No	bcc_24638|Cycle_0|Type_1	31,30	10332364,10335486	psi1:0.363636363636,psi2:0	C1_8,C2_0	C1_14,C2_2	Yes
ENSG00000121766	ZCCHC17	chr1:31782980-31791986	+	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,70,31	31783011,31791014,31791083,31791956	No	No	No	bcc_3012|Cycle_0|Type_1	31,31	31783011,31791956	psi1:0.362068965517,psi2:0.0909090909091	C1_21,C2_1	C1_37,C2_10	Yes
ENSG00000082805	ERC1	chr12:1346040-1399044	+	ES	132	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,132,27	1346070,1372200,1372331,1399018	No	No	No	bcc_61471|Cycle_0|Type_1	30,27	1346070,1399018	psi1:0.8,psi2:1.0	C1_24,C2_7	C1_6,C2_0	Yes
ENSG00000204054	LINC00963	chr9:132251547-132265629	+	ES	118	Yes	-	processed_transcript	all_splice_sites_known_(4_ss)	31,118,28	132251578,132255757,132255874,132265602	No	Yes	No	bcc_18110|Cycle_25|Type_1	31,28	132251578,132265602	psi1:0.6,psi2:0.8125	C1_3,C2_13	C1_2,C2_3	Yes
ENSG00000105258	POLR2I	chr19:36605585-36605730	-	IR	84	No	Yes	protein_coding	no_known_ss	145	-	No	No	No	bcc_23757|Cycle_0|Type_1	30,31	36605615,36605700	psi1:0.342857142857,psi2:0.153846153846	C1_24,C2_8	C1_46,C2_44	Yes
ENSG00000113456	RAD1	chr5:34908929-34909393	-	altA	97	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):34909363,34909053	124,31	34909053,34909363	No	No	No	bcc_4452|Cycle_0|Type_1	27,31	34908956,34909363	psi1:1.0,psi2:0.916666666667	C1_26,C2_22	C1_0,C2_2	Yes
ENSG00000181458	TMEM45A	chr3:100211742-100274082	+	ES	147	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,147,30	100211772,100238306,100238452,100274053	No	No	No	bcc_43804|Cycle_0|Type_1	30,30	100211772,100274053	psi1:1.0,psi2:0.413793103448	C1_3,C2_36	C1_0,C2_51	Yes
ENSG00000163785	RYK	chr3:133910787-133913955	-	altA	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	40,30	133910827,133913926	No	No	No	bcc_38606|Cycle_0|Type_1	31,30	133910818,133913926	psi1:0.454545454545,psi2:0.666666666667	C1_5,C2_6	C1_6,C2_3	(AC:133913926,CT:133910818);(AC:133913926,CA:133910827)
ENSG00000167491	GATAD2A	chr19:19576392-19603419	+	ES	133	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,133,30	19576423,19603115,19603247,19603390	No	Yes	No	bcc_59034|Cycle_4|Type_1	31,30	19576423,19603390	psi1:0.896551724138,psi2:1.0	C1_26,C2_20	C1_3,C2_0	Yes
ENSG00000198700	IPO9	chr1:201816735-201821261	+	ES	202	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,202,30	201816766,201817521,201817722,201821232	No	No	No	bcc_59682|Cycle_0|Type_1	31,30	201816766,201821232	psi1:0.904761904762,psi2:1.0	C1_19,C2_17	C1_2,C2_0	Yes
ENSG00000116957	TBCE	chr1:235577903-235594048	+	ES_MULTI	189	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,89,100,29	235577933,235582788,235582876,235590455,235590554,235594020	No	No	No	bcc_23016|Cycle_0|Type_1	30,29	235577933,235594020	psi1:1.0,psi2:0.904761904762	C1_17,C2_19	C1_0,C2_2	Yes
ENSG00000238227	C9orf69	chr9:139006768-139007332	+	IR	505	Yes	-	protein_coding	no_known_ss	564	-	No	Yes	No	bcc_45212|Cycle_2|Type_1	28,31	139006796,139007302	psi1:0.924242424242,psi2:1.0	C1_61,C2_89	C1_5,C2_0	(CT:139006796,AC:139007302)
ENSG00000136813	KIAA0368	chr9:114184451-114187728	-	ES	50	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,50,31	114184480,114185479,114185528,114187698	No	No	No	bcc_50413|Cycle_0|Type_1	29,31	114184480,114187698	psi1:0.846153846154,psi2:1.0	C1_22,C2_9	C1_4,C2_0	Yes
ENSG00000165795	NDRG2	chr14:21491449-21493218	-	ES	67	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,67,31	21491480,21492189,21492255,21493188	No	Yes	No	bcc_46697|Cycle_0|Type_1	31,31	21491480,21493188	psi1:0.688888888889,psi2:0.942857142857	C1_124,C2_33	C1_56,C2_2	Yes
ENSG00000073417	PDE8A	chr15:85626844-85643275	+	ES_MULTI	306	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,79,138,89,30	85626875,85632569,85632647,85634275,85634412,85641179,85641267,85643246	No	Yes	No	bcc_32243|Cycle_1|Type_1	31,30	85626875,85643246	psi1:0.891891891892,psi2:1.0	C1_33,C2_23	C1_4,C2_0	Yes
ENSG00000143110	C1orf162	chr1:112020022-112020378	+	altA	75	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,106	112020050,112020273	No	Yes	No	bcc_46290|Cycle_4|Type_1	28,31	112020050,112020348	psi1:0.142857142857,psi2:0.40625	C1_1,C2_13	C1_6,C2_19	Yes
ENSG00000136717	BIN1	chr2:127808457-127816617	-	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,31	127808488,127808730,127808819,127816587	No	No	No	bcc_38926|Cycle_0|Type_1	31,31	127808488,127816587	psi1:0.822580645161,psi2:1.0	C1_51,C2_17	C1_11,C2_0	Yes
ENSG00000188419	CHM	chrX:85233864-85282525	-	ES	73	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,73,31	85233895,85236741,85236813,85282495	No	No	No	bcc_58704|Cycle_0|Type_1	31,31	85233895,85282495	psi1:0.789473684211,psi2:1.0	C1_15,C2_4	C1_4,C2_0	Yes
ENSG00000073417	PDE8A	chr15:85626844-85643275	+	ES	89	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,89,30	85626875,85641179,85641267,85643246	No	Yes	No	bcc_32243|Cycle_2|Type_1	31,30	85626875,85643246	psi1:0.789473684211,psi2:1.0	C1_15,C2_4	C1_4,C2_0	Yes
ENSG00000137871	ZNF280D	chr15:56946402-56950652	-	ES	119	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,119,31	56946432,56946583,56946701,56950622	No	No	No	bcc_39545|Cycle_0|Type_1	30,31	56946432,56950622	psi1:0.870967741935,psi2:1.0	C1_27,C2_14	C1_4,C2_0	Yes
ENSG00000136160	EDNRB	chr13:78474073-78475223	-	ES	134	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,134,31	78474102,78474656,78474789,78475193	No	No	No	bcc_43064|Cycle_2|Type_1	29,31	78474102,78475193	psi1:0.916666666667,psi2:1.0	C1_33,C2_37	C1_3,C2_0	Yes
ENSG00000186141	POLR3C	chr1:145608477-145608651	-	IR	113	Yes	Yes	protein_coding	no_known_ss	174	-	No	No	No	bcc_57915|Cycle_1|Type_1	30,31	145608507,145608621	psi1:0.75,psi2:0.909090909091	C1_9,C2_10	C1_3,C2_1	Yes
ENSG00000106246,ENSG00000241468	PTCD1,ATP5J2	chr7:99057786-99063782	-	altD	18	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	30,49	99057816,99063734	No	No	No	bcc_59962|Cycle_0|Type_1	30,31	99057816,99063752	psi1:0.352941176471,psi2:0.16265060241	C1_24,C2_27	C1_44,C2_139	Yes
ENSG00000196141	SPATS2L	chr2:201284188-201305400	+	ES	207	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,207,29	201284219,201303845,201304051,201305372	No	No	No	bcc_43595|Cycle_0|Type_1	31,29	201284219,201305372	psi1:0.771428571429,psi2:0.575757575758	C1_27,C2_19	C1_8,C2_14	Yes
ENSG00000179456	ZBTB18	chr1:244217747-244217918	-	IR	112	Yes	Yes	protein_coding	no_known_ss	171	-	No	No	No	bcc_59611|Cycle_0|Type_1	30,29	244217777,244217890	psi1:0.566666666667,psi2:0.8	C1_17,C2_8	C1_13,C2_2	(AG:244217890,GT:244217777)
ENSG00000171497	PPID	chr4:159636789-159638194	-	altA	16	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	47,31	159636836,159638164	No	No	No	bcc_7872|Cycle_0|Type_1	31,31	159636820,159638164	psi1:0.938775510204,psi2:0.8	C1_46,C2_16	C1_3,C2_4	Yes
ENSG00000256043	CTSO	chr4:156858617-156864350	-	ES_altD	310	Yes	Yes	protein_coding	6_ss_annotated_(over_8_ss):156858635,156860523,156863469,156860690,156864308,156863608	18,168,140,43	156858635,156860523,156860690,156863469,156863608,156864308	No	No	No	bcc_35468|Cycle_0|Type_1	18,10,31	156858635,156860523,156860532,156864320	psi1:0.925,psi2:1.0	C1_37,C2_51	C1_3,C2_0	(AC:156864308,CT:156863608);(AC:156860523,CT:156858635);(TT:156864320,CA:156860532);(AC:156863469,CT:156860690)
ENSG00000136933	RABEPK	chr9:127969970-127990219	+	ES	162	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,162,31	127970000,127982818,127982979,127990189	No	Yes	No	bcc_55928|Cycle_3|Type_1	30,31	127970000,127990189	psi1:0.88,psi2:0.979591836735	C1_22,C2_48	C1_3,C2_1	Yes
ENSG00000111907	TPD52L1	chr6:125569498-125584005	+	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,39,26	125569529,125574863,125574901,125583980	No	Yes	No	bcc_51882|Cycle_9|Type_1	31,26	125569529,125583980	psi1:0.714285714286,psi2:0.511111111111	C1_30,C2_23	C1_12,C2_22	Yes
ENSG00000141076	CIRH1A	chr16:69166565-69167444	+	altA	54	No	-	protein_coding	all_splice_sites_known_(3_ss)	27,84	69166592,69167361	No	No	No	bcc_46801|Cycle_1|Type_1	27,30	69166592,69167415	psi1:0.833333333333,psi2:1.0	C1_20,C2_7	C1_4,C2_0	Yes
ENSG00000118418	HMGN3	chr6:79911414-79912063	-	IR	590	Yes	Yes	protein_coding	no_known_ss	649	-	No	Yes	Yes	bcc_33987|Cycle_30|Type_1	29,30	79911443,79912034	psi1:0.776315789474,psi2:0.578313253012	C1_118,C2_48	C1_34,C2_35	Yes
ENSG00000138443	ABI2	chr2:204267427-204281661	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,87,31	204267457,204276008,204276094,204281631	No	No	No	bcc_7221|Cycle_0|Type_1	30,31	204267457,204281631	psi1:0.583333333333,psi2:0.833333333333	C1_14,C2_5	C1_10,C2_1	Yes
ENSG00000116786	PLEKHM2	chr1:16046386-16051841	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,60,30	16046415,16047824,16047883,16051812	No	No	No	bcc_54996|Cycle_0|Type_1	29,30	16046415,16051812	psi1:0.707317073171,psi2:1.0	C1_29,C2_5	C1_12,C2_0	Yes
ENSG00000171566	PLRG1	chr4:155467335-155468865	-	unclassified	27	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	30,54,3	155467365,155468163,155468216,155468863	No	No	No	bcc_15472|Cycle_0|Type_1	30,27,3	155467365,155468190,155468216,155468863	psi1:1.0,psi2:0.875	C1_11,C2_21	C1_0,C2_3	Yes
ENSG00000091527	CDV3	chr3:133305535-133306036	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	133305566,133306003	No	Yes	No	bcc_33121|Cycle_9|Type_1	31,31	133305566,133306006	psi1:0.894736842105,psi2:0.71875	C1_17,C2_23	C1_2,C2_9	Yes
ENSG00000078674	PCM1	chr8:17830165-17842986	+	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,165,31	17830196,17838100,17838264,17842956	No	No	No	bcc_32449|Cycle_0|Type_1	31,31	17830196,17842956	psi1:0.666666666667,psi2:0.846153846154	C1_30,C2_33	C1_15,C2_6	Yes
ENSG00000182944	EWSR1	chr22:29684745-29687583	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,33	29684775,29687551	No	No	No	bcc_31871|Cycle_0|Type_1	30,30	29684775,29687554	psi1:0.42735042735,psi2:0.659090909091	C1_50,C2_29	C1_67,C2_15	Yes
ENSG00000138430	OLA1	chr2:175094149-175113210	-	ES	101	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,101,31	175094179,175111443,175111543,175113180	No	No	No	bcc_42986|Cycle_0|Type_1	30,31	175094179,175113180	psi1:0.911764705882,psi2:1.0	C1_31,C2_29	C1_3,C2_0	Yes
ENSG00000168615	ADAM9	chr8:38913260-38934777	+	ES	106	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,106,31	38913291,38928817,38928922,38934747	No	No	No	bcc_31343|Cycle_0|Type_1	31,31	38913291,38934747	psi1:0.903225806452,psi2:1.0	C1_28,C2_22	C1_3,C2_0	Yes
ENSG00000160408	ST6GALNAC6	chr9:130649840-130652964	-	altD	19	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,49	130649870,130652916	No	No	No	bcc_24483|Cycle_0|Type_1	30,30	130649870,130652935	psi1:0.814814814815,psi2:0.952380952381	C1_22,C2_20	C1_5,C2_1	Yes
ENSG00000234741	GAS5	chr1:173834390-173834675	-	altD	39	No	-	processed_transcript	all_splice_sites_known_(3_ss)	30,67	173834420,173834609	No	Yes	No	bcc_2642|Cycle_1|Type_1	30,28	173834420,173834648	psi1:0.576271186441,psi2:0.322580645161	C1_68,C2_10	C1_50,C2_21	Yes
ENSG00000086205	FOLH1	chr11:49168466-49175428	-	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,93,31	49168497,49170191,49170283,49175398	No	Yes	Yes	bcc_17533|Cycle_1|Type_1	31,31	49168497,49175398	psi1:0.765957446809,psi2:0.944444444444	C1_36,C2_17	C1_11,C2_1	Yes
ENSG00000182944	EWSR1	chr22:29674174-29682940	+	ES	168	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,168,29	29674205,29678379,29678546,29682912	No	No	No	bcc_31870|Cycle_0|Type_1	31,29	29674205,29682912	psi1:0.924050632911,psi2:1.0	C1_73,C2_91	C1_6,C2_0	Yes
ENSG00000072518	MARK2	chr11:63672484-63676376	+	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,28	63672515,63675732,63675776,63676349	No	No	No	bcc_70381|Cycle_0|Type_1	31,28	63672515,63676349	psi1:0.866666666667,psi2:1.0	C1_13,C2_6	C1_2,C2_0	Yes
ENSG00000114956	DGUOK	chr2:74154150-74185302	+	ES	188	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,188,30	74154179,74173846,74174033,74185273	No	Yes	No	bcc_58675|Cycle_2|Type_1	29,30	74154179,74185273	psi1:0.851063829787,psi2:0.966101694915	C1_40,C2_57	C1_7,C2_2	Yes
ENSG00000177683	THAP5	chr7:108205518-108206425	-	altD	122	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,152	108205549,108206274	No	No	No	bcc_29536|Cycle_0|Type_1	31,30	108205549,108206396	psi1:0.857142857143,psi2:1.0	C1_24,C2_10	C1_4,C2_0	Yes
ENSG00000112031	MTRF1L	chr6:153316402-153319714	-	altA	25	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	52,30	153316454,153319685	Yes	No	No	bcc_19329|Cycle_0|Type_1	27,30	153316429,153319685	psi1:0.444444444444,psi2:0.75	C1_12,C2_3	C1_15,C2_1	Yes
ENSG00000138768	USO1	chr4:76678696-76691620	+	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,12,29	76678726,76688671,76688682,76691592	No	No	No	bcc_44331|Cycle_0|Type_1	30,29	76678726,76691592	psi1:0.416666666667,psi2:0.212121212121	C1_5,C2_7	C1_7,C2_26	Yes
ENSG00000073584,ENSG00000264058	SMARCE1,KRT222	chr17:38785216-38786995	-	ES	79	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	29,79,30	38785245,38786460,38786538,38786966	No	No	No	bcc_38496|Cycle_0|Type_1	29,30	38785245,38786966	psi1:0.19696969697,psi2:0.05	C1_13,C2_2	C1_53,C2_38	Yes
ENSG00000117054	ACADM	chr1:76190471-76198358	+	ES	88	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,88,30	76190502,76194086,76194173,76198329	No	No	No	bcc_44083|Cycle_0|Type_1	31,30	76190502,76198329	psi1:0.9,psi2:0.988505747126	C1_54,C2_86	C1_6,C2_1	Yes
ENSG00000153827	TRIP12	chr2:230657818-230659925	-	altA	15	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):230657861,230659895	43,31	230657861,230659895	No	No	No	bcc_16472|Cycle_0|Type_1	28,31	230657846,230659895	psi1:0.8,psi2:0.952380952381	C1_32,C2_20	C1_8,C2_1	Yes
ENSG00000157450	RNF111	chr15:59383322-59384764	+	altA	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,53	59383353,59384712	No	No	No	bcc_45864|Cycle_0|Type_1	31,29	59383353,59384736	psi1:0.416666666667,psi2:0.222222222222	C1_5,C2_2	C1_7,C2_7	Yes
ENSG00000104093	DMXL2	chr15:51768885-51770498	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	51768916,51770468	No	No	No	bcc_42032|Cycle_0|Type_1	28,31	51768913,51770468	psi1:0.5,psi2:1.0	C1_11,C2_1	C1_11,C2_0	Yes
ENSG00000155970	MICU3	chr8:16944513-16955997	+	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,39,31	16944544,16948055,16948093,16955967	No	No	No	bcc_41131|Cycle_0|Type_1	31,31	16944544,16955967	psi1:0.766666666667,psi2:1.0	C1_23,C2_5	C1_7,C2_0	Yes
ENSG00000055070	SZRD1	chr1:16717888-16719754	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	16717919,16719723	No	Yes	No	bcc_35632|Cycle_1|Type_1	31,29	16717919,16719726	psi1:0.583333333333,psi2:0.777777777778	C1_7,C2_7	C1_5,C2_2	Yes
ENSG00000205133	TRIQK	chr8:93929206-93966664	-	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	32,31	93929238,93966634	No	No	No	bcc_23633|Cycle_0|Type_1	29,31	93929235,93966634	psi1:0.428571428571,psi2:0.642857142857	C1_3,C2_9	C1_4,C2_5	Yes
ENSG00000142949	PTPRF	chr1:44064553-44069117	+	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,31	44064584,44067742,44067768,44069087	No	No	No	bcc_17993|Cycle_0|Type_1	31,31	44064584,44069087	psi1:0.375,psi2:0.1875	C1_3,C2_3	C1_5,C2_13	Yes
ENSG00000143314	MRPL24	chr1:156708527-156710875	-	altD	41	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	29,72	156708556,156710804	No	No	No	bcc_60440|Cycle_0|Type_1	29,31	156708556,156710845	psi1:0.689655172414,psi2:0.486486486486	C1_20,C2_18	C1_9,C2_19	Yes
ENSG00000159377	PSMB4	chr1:151373033-151373268	-	IR	175	Yes	Yes	protein_coding	no_known_ss	235	-	No	No	No	bcc_24311|Cycle_0|Type_1	31,29	151373064,151373240	psi1:0.241758241758,psi2:0.0909090909091	C1_22,C2_17	C1_69,C2_170	(AG:151373240,GT:151373064)
ENSG00000116209	TMEM59	chr1:54513016-54519058	-	altD	356	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,386	54513045,54518673	No	No	No	bcc_39597|Cycle_0|Type_1	29,30	54513045,54519029	psi1:0.923076923077,psi2:1.0	C1_192,C2_225	C1_16,C2_0	Yes
ENSG00000088298	EDEM2	chr20:33865070-33865221	+	IR	92	Yes	-	protein_coding	no_known_ss	151	-	No	No	No	bcc_64212|Cycle_0|Type_1	30,29	33865100,33865193	psi1:0.903225806452,psi2:1.0	C1_28,C2_21	C1_3,C2_0	(CT:33865100,AC:33865193)
ENSG00000055070	SZRD1	chr1:16693772-16719755	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	16693803,16719723	No	Yes	No	bcc_35632|Cycle_7|Type_1	31,30	16693803,16719726	psi1:0.545454545455,psi2:0.333333333333	C1_6,C2_2	C1_5,C2_4	Yes
ENSG00000164985	PSIP1	chr9:15471198-15472660	-	altA	80	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	111,31	15471309,15472630	No	Yes	No	bcc_9325|Cycle_38|Type_1	31,31	15471229,15472630	psi1:0.869822485207,psi2:0.333333333333	C1_147,C2_1	C1_22,C2_2	Yes
ENSG00000164970	FAM219A	chr9:34402776-34405944	-	altD	51	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,82	34402805,34405863	No	No	No	bcc_67710|Cycle_0|Type_1	29,31	34402805,34405914	psi1:0.733333333333,psi2:1.0	C1_11,C2_2	C1_4,C2_0	Yes
ENSG00000174547	MRPL11	chr11:66205701-66206211	-	altD	78	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,109	66205730,66206103	No	No	No	bcc_57669|Cycle_0|Type_1	29,31	66205730,66206181	psi1:1.0,psi2:0.846153846154	C1_8,C2_22	C1_0,C2_4	Yes
ENSG00000103502	CDIPT	chr16:29872550-29874165	-	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,135,30	29872580,29873907,29874041,29874136	No	Yes	No	bcc_58140|Cycle_1|Type_1	30,30	29872580,29874136	psi1:1.0,psi2:0.903225806452	C1_41,C2_56	C1_0,C2_6	Yes
ENSG00000111907	TPD52L1	chr6:125569498-125584008	+	ES_MULTI	100	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,39,61,29	125569529,125574863,125574901,125578244,125578304,125583980	No	Yes	No	bcc_51882|Cycle_2|Type_1	31,29	125569529,125583980	psi1:0.813559322034,psi2:0.633333333333	C1_48,C2_38	C1_11,C2_22	Yes
ENSG00000001497	LAS1L	chrX:64744900-64749121	-	ES	110	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,110,30	64744930,64748140,64748249,64749092	No	No	No	bcc_52244|Cycle_1|Type_1	30,30	64744930,64749092	psi1:0.909090909091,psi2:1.0	C1_20,C2_16	C1_2,C2_0	Yes
ENSG00000118418	HMGN3	chr6:79911414-79913327	-	altA	663	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	692,31	79912106,79913297	No	Yes	Yes	bcc_33987|Cycle_37|Type_1	29,31	79911443,79913297	psi1:1.0,psi2:0.923664122137	C1_136,C2_121	C1_0,C2_10	Yes
ENSG00000257529,ENSG00000126945	RPL36A-HNRNPH2,HNRNPH2	chrX:100663264-100666953	+	altD	12	No	Yes	protein_coding,protein_coding	2_ss_annotated_(over_3_ss):100663307,100666924	43,30	100663307,100666924	No	No	No	bcc_11936|Cycle_0|Type_1	31,30	100663295,100666924	psi1:0.939024390244,psi2:0.75	C1_77,C2_6	C1_5,C2_2	Yes
ENSG00000174306	ZHX3	chr20:39813811-39830953	-	altD	226	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,257	39813841,39830697	No	No	No	bcc_36782|Cycle_0|Type_1	30,31	39813841,39830923	psi1:0.903225806452,psi2:1.0	C1_28,C2_20	C1_3,C2_0	Yes
ENSG00000093167	LRRFIP2	chr3:37125267-37136311	-	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,72,29	37125297,37132958,37133029,37136283	No	No	No	bcc_42811|Cycle_0|Type_1	30,29	37125297,37136283	psi1:0.825,psi2:0.951219512195	C1_33,C2_39	C1_7,C2_2	Yes
ENSG00000118418	HMGN3	chr6:79911414-79913327	-	ES_altA	543	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):79911993,79912106,79911443,79913297	458,114,31	79911872,79911993,79912106,79913297	No	Yes	Yes	bcc_33987|Cycle_38|Type_1	29,31	79911443,79913297	psi1:1.0,psi2:0.918699186992	C1_111,C2_113	C1_0,C2_10	Yes
ENSG00000111907	TPD52L1	chr6:125569498-125574892	+	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,15,30	125569529,125573168,125573182,125574863	No	Yes	No	bcc_51882|Cycle_11|Type_1	31,30	125569529,125574863	psi1:0.104166666667,psi2:0	C1_5,C2_0	C1_43,C2_27	Yes
ENSG00000156253	RWDD2B	chr21:30380414-30380746	-	ES	68	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,68,31	30380444,30380561,30380628,30380716	No	No	No	bcc_38135|Cycle_2|Type_1	30,31	30380444,30380716	psi1:0.833333333333,psi2:0.958333333333	C1_10,C2_46	C1_2,C2_2	Yes
ENSG00000141556	TBCD	chr17:80714060-80724172	+	ES	98	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,98,30	80714091,80721841,80721938,80724143	No	No	No	bcc_50699|Cycle_0|Type_1	31,30	80714091,80724143	psi1:0.913043478261,psi2:1.0	C1_21,C2_18	C1_2,C2_0	Yes
ENSG00000183077	AFMID	chr17:76198801-76203020	+	ES_MULTI	264	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,86,73,105,29	76198832,76200737,76200822,76200909,76200981,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_4|Type_1	31,29	76198832,76202992	psi1:0.769230769231,psi2:0.962025316456	C1_10,C2_228	C1_3,C2_9	Yes
ENSG00000156831	NSMCE2	chr8:126104169-126163443	+	ES	171	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,171,31	126104200,126114559,126114729,126163413	No	Yes	No	bcc_60491|Cycle_6|Type_1	31,31	126104200,126163413	psi1:0.88,psi2:1.0	C1_22,C2_11	C1_3,C2_0	Yes
ENSG00000113742	CPEB4	chr5:173337576-173371998	+	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,24,29	173337607,173370029,173370052,173371970	No	Yes	No	bcc_5909|Cycle_1|Type_1	31,29	173337607,173371970	psi1:0.4,psi2:0	C1_6,C2_0	C1_9,C2_1	Yes
ENSG00000148660	CAMK2G	chr10:75583814-75587877	-	ES	69	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,69,31	75583842,75585037,75585105,75587847	No	Yes	No	bcc_56145|Cycle_1|Type_1	28,31	75583842,75587847	psi1:0.4,psi2:1.0	C1_28,C2_2	C1_42,C2_0	Yes
ENSG00000109911	ELP4	chr11:31616417-31625343	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	31616448,31625312	No	No	No	bcc_54738|Cycle_2|Type_1	31,29	31616448,31625315	psi1:0.1,psi2:0.25	C1_1,C2_2	C1_9,C2_6	(GC:31616448,AG:31625315);(GC:31616448,AG:31625312)
ENSG00000123106	CCDC91	chr12:28637067-28702035	+	altA	10	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):28637098,28701996	31,40	28637098,28701996	No	No	No	bcc_48565|Cycle_0|Type_1	31,30	28637098,28702006	psi1:0.84,psi2:1.0	C1_42,C2_14	C1_8,C2_0	Yes
ENSG00000074935	TUBE1	chr6:112402379-112407789	-	ES	58	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,58,31	112402410,112405392,112405449,112407759	No	No	No	bcc_46054|Cycle_0|Type_1	31,31	112402410,112407759	psi1:1.0,psi2:0.88	C1_11,C2_22	C1_0,C2_3	Yes
ENSG00000204054	LINC00963	chr9:132251547-132265629	+	ES	177	No	-	processed_transcript	all_splice_sites_known_(4_ss)	31,177,28	132251578,132255698,132255874,132265602	No	Yes	No	bcc_18110|Cycle_27|Type_1	31,28	132251578,132265602	psi1:0.777777777778,psi2:0.933333333333	C1_7,C2_42	C1_2,C2_3	Yes
ENSG00000087152	ATXN7L3	chr17:42273167-42273430	-	altA	57	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	86,29	42273253,42273402	No	Yes	No	bcc_10094|Cycle_1|Type_1	29,29	42273196,42273402	psi1:0.155172413793,psi2:0	C1_9,C2_0	C1_49,C2_17	Yes
ENSG00000066468	FGFR2	chr10:123324064-123353252	-	ES	267	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,267,30	123324093,123324952,123325218,123353223	No	Yes	No	bcc_40054|Cycle_2|Type_1	29,30	123324093,123353223	psi1:0.958333333333,psi2:0.8125	C1_115,C2_13	C1_5,C2_3	Yes
ENSG00000136960	ENPP2	chr8:120583053-120592386	-	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,75,31	120583081,120584416,120584490,120592356	No	No	No	bcc_46570|Cycle_0|Type_1	28,31	120583081,120592356	psi1:0.757763975155,psi2:0.222222222222	C1_244,C2_2	C1_78,C2_7	Yes
ENSG00000102103	PQBP1	chrX:48755268-48755804	+	altD	68	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	97,30	48755365,48755775	No	Yes	No	bcc_55570|Cycle_1|Type_1	29,30	48755297,48755775	psi1:0.8,psi2:0.933333333333	C1_20,C2_28	C1_5,C2_2	Yes
ENSG00000185418	TARSL2	chr15:102197209-102201944	-	ES	73	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,73,30	102197239,102197988,102198060,102201915	No	No	No	bcc_54943|Cycle_0|Type_1	30,30	102197239,102201915	psi1:0.837837837838,psi2:1.0	C1_31,C2_10	C1_6,C2_0	Yes
ENSG00000137073	UBAP2	chr9:33971705-33973211	-	altA	17	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):33971752,33973181	47,31	33971752,33973181	No	Yes	No	bcc_58754|Cycle_1|Type_1	30,31	33971735,33973181	psi1:0.818181818182,psi2:1.0	C1_18,C2_5	C1_4,C2_0	Yes
ENSG00000176261	ZBTB8OS	chr1:33093114-33116061	-	ES_MULTI	234	No	-	protein_coding	all_splice_sites_known_(9_ss)	31,83,122,25,32	33093145,33099246,33099328,33099552,33099673,33100369,33100393,33116030	No	Yes	No	bcc_8003|Cycle_18|Type_1	31,28	33093145,33116034	psi1:1.0,psi2:0.914893617021	C1_37,C2_43	C1_0,C2_4	Yes
ENSG00000196535	MYO18A	chr17:27409425-27413485	-	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,30	27409456,27412622,27412666,27413456	No	No	No	bcc_9420|Cycle_0|Type_1	31,30	27409456,27413456	psi1:0.367346938776,psi2:0.565217391304	C1_18,C2_26	C1_31,C2_20	Yes
ENSG00000118418	HMGN3	chr6:79911414-79912063	-	altAD	470	Yes	Yes	protein_coding	3_ss_annotated_(over_4_ss):79911993,79912034,79911443	458,71	79911872,79911993	No	Yes	Yes	bcc_33987|Cycle_31|Type_1	29,30	79911443,79912034	psi1:0.728,psi2:0.533333333333	C1_91,C2_40	C1_34,C2_35	Yes
ENSG00000197006	METTL9	chr16:21636405-21666580	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	21636436,21666548	No	No	No	bcc_33936|Cycle_0|Type_1	31,30	21636436,21666551	psi1:0.685714285714,psi2:0.375	C1_48,C2_3	C1_22,C2_5	Yes
ENSG00000089057	SLC23A2	chr20:4855311-4880230	-	ES_MULTI	342	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,182,71,89,30	4855342,4864288,4864469,4865399,4865469,4866467,4866555,4880201	No	No	No	bcc_3478|Cycle_0|Type_1	31,30	4855342,4880201	psi1:0.909090909091,psi2:1.0	C1_60,C2_45	C1_6,C2_0	Yes
ENSG00000197555	SIPA1L1	chr14:72202077-72204985	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,28	72202108,72204958	No	No	No	bcc_31616|Cycle_1|Type_1	31,25	72202108,72204961	psi1:0.681818181818,psi2:0.857142857143	C1_15,C2_12	C1_7,C2_2	Yes
ENSG00000157869	RAB28	chr4:13383187-13475972	-	ES	130	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,130,31	13383218,13462323,13462452,13475942	No	No	No	bcc_51082|Cycle_0|Type_1	31,31	13383218,13475942	psi1:0.926829268293,psi2:0.785714285714	C1_38,C2_11	C1_3,C2_3	Yes
ENSG00000147526	TACC1	chr8:38684776-38688671	+	altD	87	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	117,29	38684893,38688643	No	No	No	bcc_25810|Cycle_0|Type_1	30,29	38684806,38688643	psi1:0.592592592593,psi2:0.285714285714	C1_32,C2_2	C1_22,C2_5	Yes
ENSG00000095787	WAC	chr10:28879730-28897145	+	ES	309	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,309,31	28879761,28884662,28884970,28897115	No	No	No	bcc_22830|Cycle_0|Type_1	31,31	28879761,28897115	psi1:0.990990990991,psi2:0.916666666667	C1_220,C2_77	C1_2,C2_7	Yes
ENSG00000172936	MYD88	chr3:38182012-38182278	+	altD	19	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):38182248,38182059	47,31	38182059,38182248	No	No	No	bcc_52240|Cycle_0|Type_1	28,31	38182040,38182248	psi1:0.5,psi2:0.842105263158	C1_1,C2_32	C1_1,C2_6	Yes
ENSG00000100485	SOS2	chr14:50625351-50626200	-	IR	3	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):50625364,50626149	13,52	-	No	No	No	bcc_45676|Cycle_0|Type_1	13,18,31	50625364,50626149,50626166,50626170	psi1:0.769230769231,psi2:1.0	C1_10,C2_2	C1_3,C2_0	(AC:50626149,CT:50625364);(TA:50626170,TT:50626166)
ENSG00000136628	EPRS	chr1:220184370-220191821	-	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,21,31	220184398,220191468,220191488,220191791	No	No	No	bcc_41456|Cycle_0|Type_1	28,31	220184398,220191791	psi1:0.5,psi2:0	C1_12,C2_0	C1_12,C2_1	Yes
ENSG00000078674	PCM1	chr8:17797341-17804725	+	ES	117	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,117,31	17797370,17797551,17797667,17804695	No	No	No	bcc_32444|Cycle_0|Type_1	29,31	17797370,17804695	psi1:0.461538461538,psi2:0.75	C1_12,C2_3	C1_14,C2_1	Yes
ENSG00000138030	KHK	chr2:27315285-27317698	+	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,135,31	27315316,27317345,27317479,27317668	No	Yes	No	bcc_28734|Cycle_3|Type_1	31,31	27315316,27317668	psi1:1.0,psi2:0.680412371134	C1_9,C2_66	C1_0,C2_31	Yes
ENSG00000067141	NEO1	chr15:73581548-73590719	+	ES	159	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,159,31	73581579,73585731,73585889,73590689	No	No	No	bcc_1198|Cycle_0|Type_1	31,31	73581579,73590689	psi1:0.760869565217,psi2:0.9375	C1_35,C2_15	C1_11,C2_1	Yes
ENSG00000114942	EEF1B2	chr2:207024377-207024665	+	IR	228	No	-	protein_coding	no_known_ss	288	-	No	Yes	No	bcc_6298|Cycle_3|Type_1	31,29	207024408,207024637	psi1:1.0,psi2:0.888888888889	C1_21,C2_40	C1_0,C2_5	Yes
ENSG00000123562	MORF4L2	chrX:102933518-102940129	-	ES_altA	80	Yes	-	protein_coding	all_splice_sites_known_(5_ss)	61,49,31	102933579,102939609,102939657,102940099	No	Yes	No	bcc_30877|Cycle_17|Type_1	30,31	102933548,102940099	psi1:0.955555555556,psi2:0.833333333333	C1_43,C2_10	C1_2,C2_2	Yes
ENSG00000062194	GPBP1	chr5:56472196-56526703	+	ES	120	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,120,31	56472227,56509901,56510020,56526673	No	Yes	No	bcc_16024|Cycle_1|Type_1	31,31	56472227,56526673	psi1:0.888888888889,psi2:1.0	C1_56,C2_29	C1_7,C2_0	Yes
ENSG00000119522	DENND1A	chr9:126531814-126641260	-	ES	44	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,44,31	126531842,126554866,126554909,126641230	No	No	No	bcc_57445|Cycle_0|Type_1	28,31	126531842,126641230	psi1:0.875,psi2:1.0	C1_14,C2_6	C1_2,C2_0	Yes
ENSG00000137776	SLTM	chr15:59192051-59204764	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,28,3	59192082,59193459,59193486,59204762	No	Yes	No	bcc_45443|Cycle_5|Type_1	28,28,3	59192079,59193459,59193486,59204762	psi1:0.7,psi2:1.0	C1_7,C2_1	C1_3,C2_0	Yes
ENSG00000152894	PTPRK	chr6:128326358-128330305	-	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,30,31	128326389,128327171,128327200,128330275	No	No	No	bcc_40442|Cycle_0|Type_1	31,31	128326389,128330275	psi1:0.3,psi2:0	C1_6,C2_0	C1_14,C2_2	Yes
ENSG00000183020	AP2A2	chr11:984723-985463	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,32	984753,985432	No	No	No	bcc_21188|Cycle_1|Type_1	30,29	984753,985435	psi1:0.333333333333,psi2:0.157894736842	C1_10,C2_3	C1_20,C2_16	Yes
ENSG00000173575	CHD2	chr15:93472291-93482838	+	ES	108	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,108,31	93472321,93480748,93480855,93482808	No	No	No	bcc_40949|Cycle_0|Type_1	30,31	93472321,93482808	psi1:0.882352941176,psi2:1.0	C1_15,C2_7	C1_2,C2_0	Yes
ENSG00000157077	ZFYVE9	chr1:52729513-52734164	+	ES	177	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,177,30	52729544,52732327,52732503,52734135	No	No	No	bcc_53467|Cycle_0|Type_1	31,30	52729544,52734135	psi1:0.794117647059,psi2:1.0	C1_27,C2_6	C1_7,C2_0	Yes
ENSG00000093183	SEC22C	chr3:42590121-42599099	-	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,66,30	42590149,42597422,42597487,42599070	No	No	No	bcc_4112|Cycle_2|Type_1	28,30	42590149,42599070	psi1:0.884615384615,psi2:1.0	C1_23,C2_11	C1_3,C2_0	Yes
ENSG00000076706	MCAM	chr11:119181583-119182020	-	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,96,31	119181613,119181800,119181895,119181990	No	No	No	bcc_1628|Cycle_0|Type_1	30,31	119181613,119181990	psi1:0.712121212121,psi2:1.0	C1_47,C2_7	C1_19,C2_0	Yes
ENSG00000244754	N4BP2L2	chr13:33101639-33112784	-	ES	1259	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,1259,30	33101669,33109906,33111164,33112755	No	No	No	bcc_42062|Cycle_1|Type_1	30,30	33101669,33112755	psi1:0.997183098592,psi2:0.939130434783	C1_354,C2_108	C1_1,C2_7	Yes
ENSG00000141027	NCOR1	chr17:15961882-15965102	-	altD	357	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,388	15961913,15964715	No	No	No	bcc_11960|Cycle_0|Type_1	31,31	15961913,15965072	psi1:1.0,psi2:0.933333333333	C1_53,C2_42	C1_0,C2_3	Yes
ENSG00000115520	COQ10B	chr2:198327424-198334822	+	altAD	3	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):198334794,198327455	30,33	198327454,198334790	No	No	No	bcc_13696|Cycle_0|Type_1	31,29	198327455,198334794	psi1:0.0952380952381,psi2:0	C1_2,C2_0	C1_19,C2_12	(GG:198327454,TT:198334790);(GT:198327455,AG:198334794)
ENSG00000047188	YTHDC2	chr5:112929216-112929536	-	IR	260	Yes	-	protein_coding	no_known_ss	320	-	No	No	No	bcc_42803|Cycle_0|Type_1	31,29	112929247,112929508	psi1:0.866666666667,psi2:0.973684210526	C1_39,C2_37	C1_6,C2_1	(AG:112929508,GT:112929247)
ENSG00000173531	MST1	chr3:49722287-49722475	+	IR	127	Yes	Yes	protein_coding	no_known_ss	188	-	Yes	Yes	No	bcc_16644|Cycle_15|Type_1	30,31	49722317,49722445	psi1:1.0,psi2:0.263888888889	C1_4,C2_76	C1_0,C2_212	(CT:49722317,AC:49722445)
ENSG00000112531	QKI	chr6:163984720-163987004	+	altA	1279	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,1306	163984751,163985699	No	Yes	No	bcc_705|Cycle_2|Type_1	31,27	163984751,163986978	psi1:0.948979591837,psi2:0.692307692308	C1_744,C2_18	C1_40,C2_8	Yes
ENSG00000204348	DXO	chr6:31938126-31938411	-	altA	100	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	129,29	31938255,31938383	No	Yes	No	bcc_66948|Cycle_1|Type_1	29,29	31938155,31938383	psi1:1.0,psi2:0.863636363636	C1_7,C2_19	C1_0,C2_3	Yes
ENSG00000185127	C6orf120	chr6:170104155-170105257	+	IR	1044	No	Yes	protein_coding	no_known_ss	1102	-	No	Yes	No	bcc_34529|Cycle_5|Type_1	29,29	170104184,170105229	psi1:0.981818181818,psi2:0.877192982456	C1_162,C2_200	C1_3,C2_28	(CT:170104184,AC:170105229)
ENSG00000140632	GLYR1	chr16:4873879-4882805	-	ES	243	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,243,31	4873908,4881980,4882222,4882775	No	No	No	bcc_19900|Cycle_0|Type_1	29,31	4873908,4882775	psi1:1.0,psi2:0.929824561404	C1_58,C2_53	C1_0,C2_4	Yes
ENSG00000160710	ADAR	chr1:154574696-154574890	-	IR	136	Yes	Yes	protein_coding	no_known_ss	194	-	No	No	No	bcc_31146|Cycle_0|Type_1	28,30	154574724,154574861	psi1:0.909090909091,psi2:1.0	C1_40,C2_27	C1_4,C2_0	(GC:154574861,CT:154574724)
ENSG00000117362	APH1A	chr1:150238563-150238962	+	IR	338	Yes	Yes	protein_coding	no_known_ss	399	-	No	No	No	bcc_48206|Cycle_2|Type_1	31,30	150238594,150238933	psi1:0.772277227723,psi2:0.910112359551	C1_78,C2_162	C1_23,C2_16	(CT:150238594,AC:150238933)
ENSG00000164985	PSIP1	chr9:15471198-15472660	-	altA	107	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):15471229,15472630	138,31	15471336,15472630	No	Yes	No	bcc_9325|Cycle_39|Type_1	31,31	15471229,15472630	psi1:0.825396825397,psi2:0.333333333333	C1_104,C2_1	C1_22,C2_2	(AC:15472630,CA:15471336);(AC:15472630,CT:15471229)
ENSG00000183077	AFMID	chr17:76198800-76203020	+	ES	105	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	32,105,29	76198832,76202027,76202131,76202992	No	Yes	Yes	bcc_3143|Cycle_0|Type_1	32,29	76198832,76202992	psi1:0.769230769231,psi2:0.952631578947	C1_10,C2_181	C1_3,C2_9	Yes
ENSG00000092330	TINF2	chr14:24709108-24709299	-	IR	132	No	Yes	protein_coding	no_known_ss	191	-	No	No	No	bcc_61449|Cycle_0|Type_1	29,30	24709137,24709270	psi1:0.910447761194,psi2:1.0	C1_61,C2_41	C1_6,C2_0	Yes
ENSG00000111011	RSRC2	chr12:122990223-122992795	-	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,90,31	122990253,122991381,122991470,122992765	No	No	No	bcc_41946|Cycle_0|Type_1	30,31	122990253,122992765	psi1:0.907894736842,psi2:1.0	C1_69,C2_44	C1_7,C2_0	Yes
ENSG00000102531	FNDC3A	chr13:49742857-49752734	+	ES_MULTI	354	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	30,54,125,175,31	49742887,49746179,49746232,49748571,49748695,49749503,49749677,49752704	No	No	No	bcc_39526|Cycle_2|Type_1	30,31	49742887,49752704	psi1:0.942307692308,psi2:1.0	C1_49,C2_80	C1_3,C2_0	Yes
ENSG00000196498	NCOR2	chr12:124810886-124812121	-	altD	138	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,167	124810916,124811955	No	No	No	bcc_68318|Cycle_0|Type_1	30,29	124810916,124812093	psi1:0.833333333333,psi2:0.666666666667	C1_20,C2_8	C1_4,C2_4	Yes
ENSG00000150456	N6AMT2	chr13:21303325-21331624	-	ES_MULTI	364	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,281,83,31	21303355,21305980,21306260,21311862,21311944,21331594	No	Yes	No	bcc_55783|Cycle_2|Type_1	30,31	21303355,21331594	psi1:1.0,psi2:0.928571428571	C1_26,C2_26	C1_0,C2_2	Yes
ENSG00000151092	NGLY1	chr3:25775444-25777830	-	ES	146	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,146,31	25775473,25777495,25777640,25777800	No	No	No	bcc_52864|Cycle_0|Type_1	29,31	25775473,25777800	psi1:1.0,psi2:0.9	C1_10,C2_18	C1_0,C2_2	Yes
ENSG00000156504	FAM122B	chrX:133919948-133921532	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	133919980,133921502	No	No	No	bcc_45186|Cycle_0|Type_1	29,31	133919977,133921502	psi1:0.642857142857,psi2:1.0	C1_18,C2_2	C1_10,C2_0	Yes
ENSG00000166348	USP54	chr10:75260565-75265095	-	ES	141	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,141,30	75260596,75264608,75264748,75265066	No	No	No	bcc_44632|Cycle_0|Type_1	31,30	75260596,75265066	psi1:0.771428571429,psi2:1.0	C1_27,C2_5	C1_8,C2_0	Yes
ENSG00000136098	NEK3	chr13:52711007-52718078	-	ES	50	Yes	Yes	protein_coding	4_ss_annotated_(over_6_ss):52718051,52715205,52715156,52711038	31,50,7,20	52711038,52715156,52715205,52718051,52718057,52718059	No	No	No	bcc_42408|Cycle_0|Type_1	31,7,20	52711038,52718051,52718057,52718059	psi1:0.75,psi2:1.0	C1_6,C2_1	C1_2,C2_0	(AC:52715156,CT:52711038);(AC:52718051,CT:52715205);(AC:52718051,CT:52711038);-
ENSG00000092148	HECTD1	chr14:31597181-31602474	-	ES	696	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,696,31	31597212,31597818,31598513,31602444	No	Yes	No	bcc_38849|Cycle_3|Type_1	31,31	31597212,31602444	psi1:0.928571428571,psi2:1.0	C1_91,C2_91	C1_7,C2_0	Yes
ENSG00000131503,ENSG00000254996	ANKHD1,ANKHD1-EIF4EBP3	chr5:139917143-139917702	+	altA	3	No	Yes	protein_coding,protein_coding	2_ss_annotated_(over_3_ss):139917174,139917671	31,32	139917174,139917671	No	No	No	bcc_38274|Cycle_0|Type_1	31,29	139917174,139917674	psi1:0.966666666667,psi2:0.866666666667	C1_29,C2_13	C1_1,C2_2	Yes
ENSG00000143436	MRPL9	chr1:151733345-151734619	-	altD	8	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,39	151733375,151734581	No	Yes	No	bcc_13597|Cycle_0|Type_1	30,31	151733375,151734589	psi1:1.0,psi2:0.857142857143	C1_2,C2_6	C1_0,C2_1	Yes
ENSG00000138030	KHK	chr2:27315286-27317698	+	ES	138	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):27317668,27315316,27317479	30,138,31	27315316,27317342,27317479,27317668	No	Yes	No	bcc_28734|Cycle_4|Type_1	30,31	27315316,27317668	psi1:1.0,psi2:0.581081081081	C1_4,C2_43	C1_0,C2_31	Yes
ENSG00000130024	PHF10	chr6:170117967-170118913	-	altA	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	35,30	170118002,170118884	No	No	No	bcc_34523|Cycle_0|Type_1	29,30	170117996,170118884	psi1:0.75,psi2:0.928571428571	C1_33,C2_13	C1_11,C2_1	Yes
ENSG00000101247	NDUFAF5	chr20:13773842-13779136	+	ES	104	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,104,30	13773873,13775484,13775587,13779107	No	No	No	bcc_60017|Cycle_0|Type_1	31,30	13773873,13779107	psi1:0.980392156863,psi2:0.894736842105	C1_50,C2_17	C1_1,C2_2	Yes
ENSG00000162972	C2orf47	chr2:200824573-200828486	+	ES	148	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,148,31	200824603,200826504,200826651,200828456	No	No	No	bcc_47653|Cycle_0|Type_1	30,31	200824603,200828456	psi1:0.925925925926,psi2:0.993333333333	C1_25,C2_149	C1_2,C2_1	Yes
ENSG00000182165	TP53TG1	chr7:86970971-86974649	-	altD	262	Yes	-	lincRNA	all_splice_sites_known_(3_ss)	29,291	86971000,86974359	No	No	No	bcc_60372|Cycle_0|Type_1	29,29	86971000,86974621	psi1:0.705882352941,psi2:0.888888888889	C1_12,C2_88	C1_5,C2_11	Yes
ENSG00000168310	IRF2	chr4:185320204-185339716	-	ES_MULTI	165	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,118,47,31	185320233,185329312,185329429,185339321,185339367,185339686	No	No	No	bcc_35581|Cycle_0|Type_1	29,31	185320233,185339686	psi1:0.918918918919,psi2:1.0	C1_34,C2_26	C1_3,C2_0	Yes
ENSG00000132305	IMMT	chr2:86398407-86400801	-	altA	33	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	61,29	86398468,86400773	No	Yes	No	bcc_50911|Cycle_0|Type_1	28,29	86398435,86400773	psi1:0.272727272727,psi2:0.454545454545	C1_9,C2_10	C1_24,C2_12	Yes
ENSG00000164933	SLC25A32	chr8:104415460-104417034	-	altA	62	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):104415552,104417004	92,31	104415552,104417004	No	No	No	bcc_18908|Cycle_2|Type_1	30,31	104415490,104417004	psi1:0.916666666667,psi2:1.0	C1_22,C2_16	C1_2,C2_0	Yes
ENSG00000119900	OGFRL1	chr6:72003051-72003266	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):72003082,72003236	31,34	72003082,72003233	No	No	No	bcc_10190|Cycle_1|Type_1	31,31	72003082,72003236	psi1:0.666666666667,psi2:0	C1_36,C2_0	C1_18,C2_1	Yes
ENSG00000150456	N6AMT2	chr13:21303325-21331624	-	ES	281	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,281,31	21303355,21305980,21306260,21331594	No	Yes	No	bcc_55783|Cycle_3|Type_1	30,31	21303355,21331594	psi1:1.0,psi2:0.928571428571	C1_25,C2_26	C1_0,C2_2	Yes
ENSG00000151689	INPP1	chr2:191225001-191231450	+	ES	61	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,61,30	191225032,191227353,191227413,191231421	No	Yes	No	bcc_43655|Cycle_5|Type_1	31,30	191225032,191231421	psi1:0.923076923077,psi2:1.0	C1_36,C2_30	C1_3,C2_0	Yes
ENSG00000076043	REXO2	chr11:114311431-114316731	+	ES_MULTI	190	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,78,112,31	114311461,114314578,114314655,114315263,114315374,114316701	No	No	No	bcc_35046|Cycle_0|Type_1	30,31	114311461,114316701	psi1:0.907407407407,psi2:0.985401459854	C1_49,C2_135	C1_5,C2_2	Yes
ENSG00000093183	SEC22C	chr3:42602757-42610387	-	ES	164	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,164,31	42602788,42605015,42605178,42610357	No	Yes	Yes	bcc_4108|Cycle_8|Type_1	31,31	42602788,42610357	psi1:0.943661971831,psi2:0.8125	C1_67,C2_13	C1_4,C2_3	Yes
ENSG00000124209	RAB22A	chr20:56886147-56928359	+	ES	82	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,82,31	56886178,56918774,56918855,56928329	No	No	No	bcc_38634|Cycle_0|Type_1	31,31	56886178,56928329	psi1:0.88,psi2:1.0	C1_22,C2_9	C1_3,C2_0	Yes
ENSG00000080822	CLDND1	chr3:98240510-98241723	-	altA	7	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	37,31	98240547,98241693	No	Yes	No	bcc_34239|Cycle_3|Type_1	30,31	98240540,98241693	psi1:0.615384615385,psi2:0	C1_80,C2_0	C1_50,C2_3	Yes
ENSG00000150403	TMCO3	chr13:114152806-114156097	+	ES	192	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,192,31	114152836,114154273,114154464,114156067	No	No	No	bcc_26730|Cycle_0|Type_1	30,31	114152836,114156067	psi1:0.930555555556,psi2:1.0	C1_67,C2_67	C1_5,C2_0	Yes
ENSG00000127419	TMEM175	chr4:945018-945499	+	altA	36	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,66	945046,945434	No	No	No	bcc_62312|Cycle_0|Type_1	28,30	945046,945470	psi1:0.3,psi2:0.142857142857	C1_3,C2_3	C1_7,C2_18	Yes
ENSG00000167106	FAM102A	chr9:130715856-130742300	-	ES	121	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,121,30	130715883,130716084,130716204,130742271	No	No	No	bcc_44805|Cycle_0|Type_1	27,30	130715883,130742271	psi1:0.888888888889,psi2:1.0	C1_40,C2_18	C1_5,C2_0	Yes
ENSG00000107679	PLEKHA1	chr10:124186516-124189170	+	ES	41	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,41,31	124186547,124187792,124187832,124189140	No	No	No	bcc_12036|Cycle_0|Type_1	31,31	124186547,124189140	psi1:0.538461538462,psi2:0.352941176471	C1_7,C2_6	C1_6,C2_11	Yes
ENSG00000128641	MYO1B	chr2:192265164-192272869	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,87,29	192265194,192267358,192267444,192272841	No	Yes	No	bcc_10838|Cycle_1|Type_1	30,29	192265194,192272841	psi1:0.666666666667,psi2:0.19298245614	C1_2,C2_22	C1_1,C2_92	Yes
ENSG00000136754	ABI1	chr10:27044639-27054177	-	ES	177	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,177,31	27044670,27047991,27048167,27054147	No	Yes	No	bcc_35435|Cycle_1|Type_1	31,31	27044670,27054147	psi1:0.918918918919,psi2:1.0	C1_34,C2_25	C1_3,C2_0	Yes
ENSG00000134291	TMEM106C	chr12:48359926-48360494	+	altD	57	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	86,29	48360012,48360466	No	No	No	bcc_34653|Cycle_0|Type_1	29,29	48359955,48360466	psi1:0.5,psi2:0.692307692308	C1_3,C2_9	C1_3,C2_4	Yes
ENSG00000175662	TOM1L2	chr17:17783029-17797004	-	ES	159	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,159,30	17783057,17786019,17786177,17796975	No	Yes	No	bcc_5714|Cycle_5|Type_1	28,30	17783057,17796975	psi1:0.814814814815,psi2:1.0	C1_22,C2_5	C1_5,C2_0	Yes
ENSG00000178209	PLEC	chr8:145012379-145012829	-	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,15,31	145012408,145012569,145012583,145012799	No	No	No	bcc_63022|Cycle_0|Type_1	29,31	145012408,145012799	psi1:0.212121212121,psi2:0	C1_7,C2_0	C1_26,C2_5	Yes
ENSG00000114956	DGUOK	chr2:74154148-74173876	+	ES	113	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,113,31	74154179,74166037,74166149,74173846	No	Yes	No	bcc_58675|Cycle_0|Type_1	31,31	74154179,74173846	psi1:0.833333333333,psi2:0.666666666667	C1_15,C2_18	C1_3,C2_9	Yes
ENSG00000023191	RNH1	chr11:502152-507143	-	altA	68	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	97,31	502249,507113	No	Yes	No	bcc_58209|Cycle_2|Type_1	29,31	502181,507113	psi1:0.846153846154,psi2:0.6875	C1_11,C2_11	C1_2,C2_5	Yes
ENSG00000115816	CEBPZ	chr2:37428838-37429036	+	IR	136	Yes	Yes	protein_coding	no_known_ss	198	-	No	No	No	bcc_27451|Cycle_0|Type_1	31,31	37428869,37429006	psi1:0.563636363636,psi2:0.739130434783	C1_31,C2_51	C1_24,C2_18	Yes
ENSG00000130988	RGN	chrX:46943968-46951107	+	ES	216	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,216,31	46943999,46949175,46949390,46951077	No	Yes	No	bcc_50212|Cycle_1|Type_1	31,31	46943999,46951077	psi1:0.592592592593,psi2:0.813953488372	C1_16,C2_140	C1_11,C2_32	Yes
ENSG00000267216,ENSG00000142396	AC010642.1,ERVK3-1	chr19:58817552-58823591	+	altA	31	Yes	-	protein_coding,processed_transcript	all_splice_sites_known_(3_ss)	30,60	58817582,58823532	No	No	No	bcc_49066|Cycle_0|Type_1	30,29	58817582,58823563	psi1:0.964285714286,psi2:0.863636363636	C1_27,C2_19	C1_1,C2_3	Yes
ENSG00000137992	DBT	chr1:100672164-100680400	-	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,78,28	100672192,100676250,100676327,100680373	No	No	No	bcc_7399|Cycle_0|Type_1	28,28	100672192,100680373	psi1:1.0,psi2:0.869565217391	C1_7,C2_20	C1_0,C2_3	Yes
ENSG00000079819	EPB41L2	chr6:131188692-131206266	-	ES	564	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,564,31	131188721,131190703,131191266,131206236	No	Yes	No	bcc_46240|Cycle_3|Type_1	29,31	131188721,131206236	psi1:0.852173913043,psi2:1.0	C1_98,C2_29	C1_17,C2_0	Yes
ENSG00000107863	ARHGAP21	chr10:24910269-24918955	-	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,30,31	24910298,24911662,24911691,24918925	No	No	No	bcc_43458|Cycle_0|Type_1	29,31	24910298,24918925	psi1:0.64,psi2:0	C1_32,C2_0	C1_18,C2_1	Yes
ENSG00000144118	RALB	chr2:121010526-121036223	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	30,33	121010556,121036191	No	No	No	bcc_35766|Cycle_0|Type_1	30,30	121010556,121036194	psi1:0.32,psi2:0	C1_8,C2_0	C1_17,C2_2	Yes
ENSG00000127980	PEX1	chr7:92136409-92140288	-	ES	83	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,83,31	92136440,92138643,92138725,92140258	No	No	No	bcc_60537|Cycle_0|Type_1	31,31	92136440,92140258	psi1:0.882352941176,psi2:1.0	C1_15,C2_6	C1_2,C2_0	Yes
ENSG00000186301	MST1P2	chr1:16975715-16975903	-	IR	127	Yes	-	pseudogene	no_known_ss	188	-	Yes	Yes	No	bcc_16644|Cycle_2|Type_1	31,30	16975746,16975874	psi1:1.0,psi2:0.278911564626	C1_4,C2_82	C1_0,C2_212	(AG:16975874,GT:16975746)
ENSG00000128829	EIF2AK4	chr15:40326615-40327258	-	IR	582	No	Yes	protein_coding	no_known_ss	643	-	No	No	No	bcc_22373|Cycle_0|Type_1	30,31	40326645,40327228	psi1:0.82,psi2:0.65	C1_82,C2_26	C1_18,C2_14	(AG:40327228,GT:40326645)
ENSG00000258344	RP11-968A15.8	chr12:54680486-54680765	+	IR	220	Yes	-	sense_overlapping	no_known_ss	279	-	No	No	No	bcc_56561|Cycle_1|Type_1	30,29	54680516,54680737	psi1:0.333333333333,psi2:0.521739130435	C1_9,C2_24	C1_18,C2_22	Yes
ENSG00000183077	AFMID	chr17:76198801-76203020	+	ES_MULTI	178	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,73,105,29	76198832,76200909,76200981,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_5|Type_1	31,29	76198832,76202992	psi1:0.785714285714,psi2:0.955665024631	C1_11,C2_194	C1_3,C2_9	Yes
ENSG00000111727	HCFC2	chr12:104461855-104474552	+	ES	209	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,209,29	104461885,104473223,104473431,104474524	No	No	No	bcc_67806|Cycle_0|Type_1	30,29	104461885,104474524	psi1:0.8,psi2:1.0	C1_20,C2_4	C1_5,C2_0	Yes
ENSG00000169727	GPS1	chr17:80011895-80012413	+	altA	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,40	80011925,80012374	No	No	No	bcc_67511|Cycle_0|Type_1	30,28	80011925,80012386	psi1:0.307692307692,psi2:0.153846153846	C1_4,C2_2	C1_9,C2_11	Yes
ENSG00000162692	VCAM1	chr1:101185450-101186141	+	altA	79	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):101185480,101186032	30,110	101185480,101186032	No	No	No	bcc_45299|Cycle_0|Type_1	30,31	101185480,101186111	psi1:1.0,psi2:0.9	C1_9,C2_18	C1_0,C2_2	Yes
ENSG00000107331	ABCA2	chr9:139910893-139911056	-	IR	102	No	Yes	protein_coding	no_known_ss	163	-	No	No	No	bcc_23905|Cycle_0|Type_1	30,31	139910923,139911026	psi1:0.355555555556,psi2:0	C1_16,C2_0	C1_29,C2_3	Yes
ENSG00000157827	FMNL2	chr2:153497397-153504339	+	ES	94	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):153497428,153504310	31,94,30	153497428,153501948,153502041,153504310	No	Yes	No	bcc_40062|Cycle_3|Type_1	31,30	153497428,153504310	psi1:0.257142857143,psi2:0.75	C1_36,C2_3	C1_104,C2_1	(GC:153502041,AG:153504310);(GT:153497428,AG:153504310);(GT:153497428,AG:153501948)
ENSG00000183077	AFMID	chr17:76198801-76203020	+	ES_MULTI	577	Yes	Yes	protein_coding	all_splice_sites_known_(14_ss)	31,86,73,98,79,136,105,29	76198832,76200737,76200822,76200909,76200981,76201174,76201271,76201521,76201599,76201684,76201819,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_49|Type_1	31,29	76198832,76202992	psi1:0.8125,psi2:0.971337579618	C1_13,C2_305	C1_3,C2_9	Yes
ENSG00000132604	TERF2	chr16:69391431-69395335	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):69391464,69395307	33,29	69391464,69395307	No	No	No	bcc_26256|Cycle_0|Type_1	30,29	69391461,69395307	psi1:0.787234042553,psi2:0.5	C1_37,C2_2	C1_10,C2_2	Yes
ENSG00000182628	SKA2	chr17:57196826-57232522	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,87,31	57196856,57208642,57208728,57232492	No	Yes	No	bcc_27646|Cycle_0|Type_1	30,31	57196856,57232492	psi1:0.888888888889,psi2:1.0	C1_40,C2_17	C1_5,C2_0	Yes
ENSG00000102103	PQBP1	chrX:48759285-48760038	+	ES_altA	288	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):48760009,48759794,48759510,48759319	34,285,30	48759319,48759510,48759794,48760009	No	Yes	Yes	bcc_55569|Cycle_4|Type_1	34,27	48759319,48760012	psi1:0.938775510204,psi2:1.0	C1_46,C2_54	C1_3,C2_0	Yes
ENSG00000166831	RBPMS2	chr15:65040696-65041228	-	altA	39	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):65040766,65041199	70,30	65040766,65041199	No	No	No	bcc_78573|Cycle_0|Type_1	31,30	65040727,65041199	psi1:1.0,psi2:0.818181818182	C1_2,C2_9	C1_0,C2_2	Yes
ENSG00000116497	S100PBP	chr1:33292500-33293627	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	33292531,33293594	No	No	No	bcc_69300|Cycle_0|Type_1	31,31	33292531,33293597	psi1:0.818181818182,psi2:1.0	C1_9,C2_2	C1_2,C2_0	Yes
ENSG00000205746	RP11-1212A22.1	chr16:18445770-18446292	-	ES	72	No	-	pseudogene	all_splice_sites_known_(4_ss)	30,72,31	18445800,18446069,18446140,18446262	Yes	No	No	bcc_68003|Cycle_0|Type_1	30,31	18445800,18446262	psi1:0.923076923077,psi2:1.0	C1_12,C2_9	C1_1,C2_0	Yes
ENSG00000254681	PKD1P5	chr16:18489251-18489773	-	ES	72	No	-	pseudogene	all_splice_sites_known_(4_ss)	30,72,31	18489281,18489550,18489621,18489743	Yes	No	No	bcc_68003|Cycle_0|Type_1	30,31	18489281,18489743	psi1:0.923076923077,psi2:1.0	C1_12,C2_9	C1_1,C2_0	Yes
ENSG00000008710	PKD1	chr16:2168816-2169338	-	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,72,31	2168846,2169115,2169186,2169308	Yes	No	No	bcc_68003|Cycle_0|Type_1	30,31	2168846,2169308	psi1:0.923076923077,psi2:1.0	C1_12,C2_9	C1_1,C2_0	Yes
ENSG00000244257	PKD1P1	chr16:16410088-16410610	+	ES	72	No	-	pseudogene	all_splice_sites_known_(4_ss)	31,72,30	16410119,16410241,16410312,16410581	Yes	No	No	bcc_68003|Cycle_0|Type_1	31,30	16410119,16410581	psi1:0.923076923077,psi2:1.0	C1_12,C2_9	C1_1,C2_0	Yes
ENSG00000183458	RP11-958N24.1	chr16:15011437-15011959	+	ES	72	No	-	pseudogene	all_splice_sites_known_(4_ss)	31,72,30	15011468,15011590,15011661,15011930	Yes	No	No	bcc_68003|Cycle_0|Type_1	31,30	15011468,15011930	psi1:0.923076923077,psi2:1.0	C1_12,C2_9	C1_1,C2_0	Yes
ENSG00000250251	PKD1P6	chr16:15231750-15232272	-	ES	72	No	-	pseudogene	all_splice_sites_known_(4_ss)	30,72,31	15231780,15232049,15232120,15232242	Yes	No	No	bcc_68003|Cycle_0|Type_1	30,31	15231780,15232242	psi1:0.923076923077,psi2:1.0	C1_12,C2_9	C1_1,C2_0	Yes
ENSG00000204054	LINC00963	chr9:132255843-132265633	+	altA	3	No	-	processed_transcript	2_ss_annotated_(over_3_ss):132255874,132265602	31,32	132255874,132265602	No	Yes	No	bcc_18110|Cycle_16|Type_1	31,29	132255874,132265605	psi1:1.0,psi2:0.785714285714	C1_2,C2_11	C1_0,C2_3	Yes
ENSG00000176731	C8orf59	chr8:86129700-86132565	-	ES	41	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,41,31	86129731,86131552,86131592,86132535	No	Yes	No	bcc_29449|Cycle_4|Type_1	31,31	86129731,86132535	psi1:0.5,psi2:0.285714285714	C1_6,C2_14	C1_6,C2_35	Yes
ENSG00000182628	SKA2	chr17:57189676-57232522	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,87,31	57189706,57208642,57208728,57232492	No	Yes	No	bcc_27646|Cycle_6|Type_1	30,31	57189706,57232492	psi1:0.789473684211,psi2:0.9375	C1_30,C2_15	C1_8,C2_1	Yes
ENSG00000153310	FAM49B	chr8:130883711-130915588	-	ES	83	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,83,31	130883742,130892622,130892704,130915558	No	Yes	No	bcc_40732|Cycle_1|Type_1	31,31	130883742,130915558	psi1:0.344827586207,psi2:0	C1_10,C2_0	C1_19,C2_2	Yes
ENSG00000115084	SLC35F5	chr2:114464727-114464790	-	deletion	3	No	-	protein_coding	no_known_ss	63	114464727	No	No	No	bcc_21894|Cycle_0|Type_1	29,31	114464756,114464760	psi1:1.0,psi2:0.76	C1_3,C2_19	C1_0,C2_6	-
ENSG00000009307	CSDE1	chr1:115279445-115280613	-	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,93,30	115279476,115280092,115280184,115280584	No	No	No	bcc_15872|Cycle_2|Type_1	31,30	115279476,115280584	psi1:0.22,psi2:0.454545454545	C1_33,C2_10	C1_117,C2_12	Yes
ENSG00000118454	ANKRD13C	chr1:70728499-70740431	-	ES	101	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,101,29	70728530,70736539,70736639,70740403	No	No	No	bcc_34139|Cycle_0|Type_1	31,29	70728530,70740403	psi1:0.854838709677,psi2:0.6	C1_53,C2_3	C1_9,C2_2	Yes
ENSG00000109111	SUPT6H	chr17:27027501-27028487	+	ES	188	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,188,31	27027530,27027959,27028146,27028457	No	No	No	bcc_46708|Cycle_0|Type_1	29,31	27027530,27028457	psi1:0.941176470588,psi2:1.0	C1_32,C2_40	C1_2,C2_0	Yes
ENSG00000079819	EPB41L2	chr6:131188693-131206266	-	ES	315	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,315,31	131188721,131190952,131191266,131206236	No	Yes	No	bcc_46240|Cycle_4|Type_1	28,31	131188721,131206236	psi1:0.784810126582,psi2:1.0	C1_62,C2_11	C1_17,C2_0	Yes
ENSG00000092020	PPP2R3C	chr14:35568559-35579761	-	ES_MULTI	282	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,71,98,113,31	35568590,35576510,35576580,35577345,35577442,35579025,35579137,35579731	No	No	No	bcc_37291|Cycle_0|Type_1	31,31	35568590,35579731	psi1:0.903614457831,psi2:1.0	C1_75,C2_38	C1_8,C2_0	Yes
ENSG00000176261	ZBTB8OS	chr1:33093114-33116064	-	ES_MULTI	230	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,83,122,25,31	33093145,33099246,33099328,33099552,33099673,33100369,33100393,33116034	No	Yes	No	bcc_8003|Cycle_15|Type_1	31,31	33093145,33116034	psi1:1.0,psi2:0.927272727273	C1_41,C2_51	C1_0,C2_4	Yes
ENSG00000114956	DGUOK	chr2:74154148-74185302	+	ES_MULTI	301	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,113,188,30	74154179,74166037,74166149,74173846,74174033,74185273	No	Yes	No	bcc_58675|Cycle_5|Type_1	31,30	74154179,74185273	psi1:0.881355932203,psi2:0.972602739726	C1_52,C2_71	C1_7,C2_2	Yes
ENSG00000147419	CCDC25	chr8:27593733-27605622	-	ES	46	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,46,29	27593762,27597989,27598034,27605594	No	No	No	bcc_22666|Cycle_0|Type_1	29,29	27593762,27605594	psi1:0.910256410256,psi2:1.0	C1_71,C2_40	C1_7,C2_0	Yes
ENSG00000060237	WNK1	chr12:1009806-1017043	+	ES	72	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):1009836,1017013,1010727	30,72,31	1009836,1010727,1010798,1017013	No	No	No	bcc_37116|Cycle_0|Type_1	30,31	1009836,1017013	psi1:0.0943396226415,psi2:0	C1_5,C2_0	C1_48,C2_25	Yes
ENSG00000137776	SLTM	chr15:59181724-59185126	-	ES	181	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,181,31	59181753,59182480,59182660,59185096	No	No	No	bcc_45446|Cycle_0|Type_1	29,31	59181753,59185096	psi1:0.986301369863,psi2:0.913043478261	C1_72,C2_21	C1_1,C2_2	Yes
ENSG00000173660	UQCRH	chr1:46769488-46775856	+	ES	148	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	4,27,148,30	46769492,46774773,46774799,46775569,46775716,46775827	No	No	No	bcc_56376|Cycle_0|Type_1	4,27,30	46769492,46774773,46774799,46775827	psi1:0.359050445104,psi2:0.194331983806	C1_121,C2_48	C1_216,C2_199	Yes
ENSG00000022840	RNF10	chr12:121004753-121013461	+	ES	101	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,101,28	121004783,121008994,121009094,121013434	No	No	No	bcc_33178|Cycle_0|Type_1	30,28	121004783,121013434	psi1:0.867924528302,psi2:0.964788732394	C1_46,C2_137	C1_7,C2_5	Yes
ENSG00000184007	PTP4A2	chr1:32377396-32384599	-	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,93,29	32377427,32381496,32381588,32384571	No	No	No	bcc_20529|Cycle_0|Type_1	31,29	32377427,32384571	psi1:0.971659919028,psi2:0.8828125	C1_240,C2_113	C1_7,C2_15	Yes
ENSG00000100084,ENSG00000242259	HIRA,C22orf39	chr22:19349424-19371172	-	ES_MULTI	360	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(6_ss)	30,162,198,30	19349454,19363154,19363315,19365392,19365589,19371143	No	No	No	bcc_54117|Cycle_0|Type_1	30,30	19349454,19371143	psi1:1.0,psi2:0.921052631579	C1_24,C2_35	C1_0,C2_3	Yes
ENSG00000007923	DNAJC11	chr1:6727841-6740998	-	ES	74	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,74,31	6727870,6738454,6738527,6740968	No	No	No	bcc_46629|Cycle_0|Type_1	29,31	6727870,6740968	psi1:0.933333333333,psi2:1.0	C1_28,C2_26	C1_2,C2_0	Yes
ENSG00000112893	MAN2A1	chr5:109155558-109159451	+	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,123,28	109155588,109155921,109156043,109159424	No	No	No	bcc_16791|Cycle_0|Type_1	30,28	109155588,109159424	psi1:0.933333333333,psi2:1.0	C1_28,C2_26	C1_2,C2_0	Yes
ENSG00000136754	ABI1	chr10:27040682-27048019	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,87,29	27040712,27044584,27044670,27047991	No	Yes	No	bcc_35435|Cycle_9|Type_1	30,29	27040712,27047991	psi1:0.741935483871,psi2:0.909090909091	C1_23,C2_10	C1_8,C2_1	Yes
ENSG00000180815	MAP3K15	chrX:19379028-19379232	+	IR	145	Yes	-	protein_coding	no_known_ss	204	-	No	No	No	bcc_14738|Cycle_0|Type_1	28,31	19379056,19379202	psi1:1.0,psi2:0.914893617021	C1_26,C2_43	C1_0,C2_4	(CA:19379056,GG:19379202)
ENSG00000212694	AC084018.1	chr12:122240659-122240814	-	IR	94	Yes	-	lincRNA	no_known_ss	155	-	No	No	No	bcc_51165|Cycle_1|Type_1	31,30	122240690,122240785	psi1:0.882352941176,psi2:0.714285714286	C1_30,C2_5	C1_4,C2_2	Yes
ENSG00000176731	C8orf59	chr8:86129701-86132565	-	ES	128	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,128,31	86129731,86131465,86131592,86132535	No	Yes	No	bcc_29449|Cycle_1|Type_1	30,31	86129731,86132535	psi1:0.75,psi2:0.533333333333	C1_15,C2_40	C1_5,C2_35	Yes
ENSG00000170871	KIAA0232	chr4:6865879-6873331	+	ES	72	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):6873301,6865910	31,72,31	6865910,6867919,6867990,6873301	No	No	No	bcc_8405|Cycle_0|Type_1	31,31	6865910,6873301	psi1:0.56,psi2:0	C1_42,C2_0	C1_33,C2_2	Yes
ENSG00000163946	FAM208A	chr3:56667843-56672764	-	altA	123	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	151,31	56667994,56672734	No	No	No	bcc_22795|Cycle_0|Type_1	28,31	56667871,56672734	psi1:0.733333333333,psi2:1.0	C1_22,C2_3	C1_8,C2_0	Yes
ENSG00000152291	TGOLN2	chr2:85553898-85554131	-	IR	174	No	Yes	protein_coding	no_known_ss	233	-	No	No	No	bcc_8788|Cycle_1|Type_1	29,30	85553927,85554102	psi1:0.872093023256,psi2:0.971428571429	C1_75,C2_68	C1_11,C2_2	Yes
ENSG00000172590	MRPL52	chr14:23299433-23303411	+	ES	65	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,65,31	23299463,23302627,23302691,23303381	No	Yes	No	bcc_66011|Cycle_2|Type_1	30,31	23299463,23303381	psi1:1.0,psi2:0.87619047619	C1_32,C2_92	C1_0,C2_13	Yes
ENSG00000099203	TMED1	chr19:10943485-10943657	-	IR	111	No	Yes	protein_coding	no_known_ss	172	-	No	No	No	bcc_67865|Cycle_0|Type_1	30,31	10943515,10943627	psi1:1.0,psi2:0.885714285714	C1_12,C2_31	C1_0,C2_4	Yes
ENSG00000138674	SEC31A	chr4:83803062-83812271	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	83803093,83812241	No	No	No	bcc_35451|Cycle_0|Type_1	28,31	83803090,83812241	psi1:0.571428571429,psi2:0.75	C1_4,C2_3	C1_3,C2_1	Yes
ENSG00000143771	CNIH4	chr1:224553662-224563526	+	ES	141	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,141,30	224553693,224558985,224559125,224563497	No	No	No	bcc_11514|Cycle_0|Type_1	31,30	224553693,224563497	psi1:1.0,psi2:0.901098901099	C1_39,C2_82	C1_0,C2_9	Yes
ENSG00000106052	TAX1BP1	chr7:27855982-27856537	+	altD	126	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	157,29	27856139,27856509	No	No	No	bcc_27543|Cycle_0|Type_1	31,29	27856013,27856509	psi1:0.420689655172,psi2:0.22641509434	C1_61,C2_12	C1_84,C2_41	Yes
ENSG00000100417	PMM1	chr22:41980032-41980561	-	ES	92	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,92,31	41980062,41980285,41980376,41980531	No	No	No	bcc_61935|Cycle_0|Type_1	30,31	41980062,41980531	psi1:0.942307692308,psi2:1.0	C1_49,C2_60	C1_3,C2_0	Yes
ENSG00000168066	SF1	chr11:64532959-64534402	-	altA	637	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	668,31	64533627,64534372	No	No	No	bcc_22963|Cycle_0|Type_1	31,31	64532990,64534372	psi1:0.978260869565,psi2:0.883333333333	C1_45,C2_53	C1_1,C2_7	Yes
ENSG00000205352,ENSG00000257379,ENSG00000197111	PRR13,RP11-793H13.8,PCBP2	chr12:53835546-53836508	+	altD	8	Yes	Yes	protein_coding,processed_transcript,protein_coding	all_splice_sites_known_(3_ss)	38,30	53835584,53836479	No	No	No	bcc_47994|Cycle_1|Type_1	30,30	53835576,53836479	psi1:0.6,psi2:0.416666666667	C1_12,C2_5	C1_8,C2_7	Yes
ENSG00000013561	RNF14	chr5:141353277-141359717	+	ES	152	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,152,30	141353307,141354369,141354520,141359688	No	Yes	No	bcc_50866|Cycle_4|Type_1	30,30	141353307,141359688	psi1:0.928571428571,psi2:1.0	C1_39,C2_31	C1_3,C2_0	Yes
ENSG00000013441	CLK1	chr2:201724438-201724878	+	IR	378	No	Yes	protein_coding	no_known_ss	440	-	No	No	No	bcc_33462|Cycle_0|Type_1	31,31	201724469,201724848	psi1:0.952830188679,psi2:0.84375	C1_101,C2_27	C1_5,C2_5	(CT:201724469,AC:201724848)
ENSG00000079277	MKNK1	chr1:47042295-47048928	-	ES	98	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,98,29	47042326,47046202,47046299,47048900	No	No	No	bcc_65938|Cycle_0|Type_1	31,29	47042326,47048900	psi1:0.866666666667,psi2:1.0	C1_13,C2_4	C1_2,C2_0	Yes
ENSG00000169490	TM2D2	chr8:38853181-38853758	-	altA	101	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	132,27	38853313,38853732	No	Yes	No	bcc_54143|Cycle_2|Type_1	31,27	38853212,38853732	psi1:0.866666666667,psi2:1.0	C1_13,C2_4	C1_2,C2_0	Yes
ENSG00000122566	HNRNPA2B1	chr7:26230050-26230642	-	IR	532	Yes	-	protein_coding	no_known_ss	592	-	No	Yes	No	bcc_6799|Cycle_4|Type_1	30,30	26230080,26230613	psi1:0.83950617284,psi2:0.679104477612	C1_68,C2_91	C1_13,C2_43	Yes
ENSG00000168264	IRF2BP2	chr1:234743571-234744271	-	altD	48	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	27,79	234743598,234744193	No	No	No	bcc_6504|Cycle_0|Type_1	27,31	234743598,234744241	psi1:0.357142857143,psi2:0.533333333333	C1_5,C2_8	C1_9,C2_7	(AC:234744193,CT:234743598);(GC:234744241,CT:234743598)
ENSG00000151806	GUF1	chr4:44688699-44691333	+	ES	140	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,140,31	44688730,44690024,44690163,44691303	No	No	No	bcc_16808|Cycle_0|Type_1	31,31	44688730,44691303	psi1:0.85,psi2:0.7	C1_17,C2_7	C1_3,C2_3	Yes
ENSG00000225630	MTND2P28	chr1:565192-565253	-	deletion	3	No	-	pseudogene	no_known_ss	61	565192	Yes	No	No	bcc_71591|Cycle_0|Type_1	28,30	565220,565224	psi1:0.95,psi2:0.846153846154	C1_19,C2_11	C1_1,C2_2	-
ENSG00000198763	MT-ND2	chrMT:4642-4703	-	deletion	3	No	Yes	protein_coding	no_known_ss	61	4642	Yes	No	No	bcc_71591|Cycle_0|Type_1	28,30	4670,4674	psi1:0.95,psi2:0.846153846154	C1_19,C2_11	C1_1,C2_2	-
ENSG00000179526	SHARPIN	chr8:145154074-145154210	-	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):145154180,145154108	34,31	145154108,145154180	No	Yes	No	bcc_61871|Cycle_0|Type_1	28,31	145154102,145154180	psi1:1.0,psi2:0.823529411765	C1_3,C2_14	C1_0,C2_3	Yes
ENSG00000169139	UBE2V2	chr8:48955710-48973271	+	ES	126	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,126,30	48955741,48962413,48962538,48973242	No	No	No	bcc_11412|Cycle_0|Type_1	31,30	48955741,48973242	psi1:0.993464052288,psi2:0.934426229508	C1_152,C2_57	C1_1,C2_4	Yes
ENSG00000180628	PCGF5	chr10:93024247-93038056	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,60,31	93024277,93031395,93031454,93038026	No	No	No	bcc_10112|Cycle_0|Type_1	30,31	93024277,93038026	psi1:0.777777777778,psi2:0.928571428571	C1_28,C2_13	C1_8,C2_1	Yes
ENSG00000250619	CTD-2215L10.1	chr5:9037239-9037306	+	deletion	7	Yes	-	antisense	no_known_ss	67	9037239	No	No	No	bcc_3448|Cycle_0|Type_1	29,31	9037268,9037276	psi1:0.434782608696,psi2:0	C1_10,C2_0	C1_13,C2_1	-
ENSG00000125877	ITPA	chr20:3190234-3194659	+	ES_MULTI	123	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,58,65,29	3190263,3193815,3193872,3193965,3194029,3194631	No	No	No	bcc_51467|Cycle_2|Type_1	29,29	3190263,3194631	psi1:0.929824561404,psi2:1.0	C1_53,C2_42	C1_4,C2_0	Yes
ENSG00000136960	ENPP2	chr8:120592379-120594700	-	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,43	120592407,120594658	No	No	No	bcc_46571|Cycle_0|Type_1	28,31	120592407,120594670	psi1:0.702380952381,psi2:0.384615384615	C1_118,C2_5	C1_50,C2_8	Yes
ENSG00000100209	HSCB	chr22:29140666-29147259	+	ES	145	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	26,145,31	29140692,29141852,29141996,29147229	No	Yes	No	bcc_9057|Cycle_8|Type_1	26,31	29140692,29147229	psi1:0.866666666667,psi2:0.961538461538	C1_13,C2_25	C1_2,C2_1	Yes
ENSG00000156973	PDE6D	chr2:232597712-232602753	-	ES	106	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,106,31	232597743,232601897,232602002,232602723	No	No	No	bcc_47106|Cycle_0|Type_1	31,31	232597743,232602723	psi1:0.84,psi2:1.0	C1_42,C2_10	C1_8,C2_0	Yes
ENSG00000160688	FLAD1	chr1:154956512-154965218	+	ES_MULTI	1182	No	Yes	protein_coding	all_splice_sites_known_(10_ss)	30,745,148,99,190,30	154956542,154960581,154961325,154962036,154962183,154962635,154962733,154962815,154963004,154965189	No	No	No	bcc_56609|Cycle_1|Type_1	30,30	154956542,154965189	psi1:0.960784313725,psi2:1.0	C1_49,C2_177	C1_2,C2_0	Yes
ENSG00000170634	ACYP2	chr2:54365857-54531855	+	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,70,31	54365885,54494433,54494502,54531825	No	No	No	bcc_42771|Cycle_0|Type_1	28,31	54365885,54531825	psi1:0.0972222222222,psi2:0	C1_7,C2_0	C1_65,C2_30	Yes
ENSG00000148308	GTF3C5	chr9:135933580-135933674	+	deletion	38	Yes	-	protein_coding	no_known_ss	94	135933580	No	No	No	bcc_28628|Cycle_0|Type_1	25,31	135933605,135933644	psi1:1.0,psi2:0.894736842105	C1_7,C2_17	C1_0,C2_2	-
ENSG00000052126	PLEKHA5	chr12:19519012-19528495	+	ES	106	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,106,31	19519043,19522627,19522732,19528465	No	No	No	bcc_31409|Cycle_0|Type_1	31,31	19519043,19528465	psi1:0.903225806452,psi2:1.0	C1_28,C2_13	C1_3,C2_0	Yes
ENSG00000136280	CCM2	chr7:45104214-45112354	+	ES_MULTI	273	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,137,136,30	45104245,45108042,45108178,45109425,45109560,45112325	No	No	No	bcc_57475|Cycle_0|Type_1	31,30	45104245,45112325	psi1:0.931818181818,psi2:0.992248062016	C1_41,C2_128	C1_3,C2_1	Yes
ENSG00000196850	PPTC7	chr12:110974871-110977657	-	ES	130	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,130,31	110974900,110975949,110976078,110977627	No	No	No	bcc_74468|Cycle_0|Type_1	29,31	110974900,110977627	psi1:0.904761904762,psi2:1.0	C1_19,C2_9	C1_2,C2_0	Yes
ENSG00000163702	IL17RC	chr3:9960262-9962273	+	altA	69	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):9960293,9962175	31,99	9960293,9962175	No	No	No	bcc_62858|Cycle_0|Type_1	31,30	9960293,9962244	psi1:1.0,psi2:0.904761904762	C1_9,C2_19	C1_0,C2_2	Yes
ENSG00000102543	CDADC1	chr13:49830018-49833649	+	altA	140	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,168	49830049,49833482	No	No	No	bcc_58987|Cycle_2|Type_1	31,28	49830049,49833622	psi1:0.904761904762,psi2:1.0	C1_19,C2_9	C1_2,C2_0	Yes
ENSG00000138386	NAB1	chr2:191537847-191550230	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,29	191537878,191548464,191548553,191550202	No	No	No	bcc_51117|Cycle_0|Type_1	31,29	191537878,191550202	psi1:1.0,psi2:0.95	C1_30,C2_19	C1_0,C2_1	Yes
ENSG00000196998	WDR45	chrX:48934379-48935526	-	ES	105	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,105,31	48934409,48935302,48935406,48935496	No	No	No	bcc_61135|Cycle_0|Type_1	30,31	48934409,48935496	psi1:0.882352941176,psi2:0.969696969697	C1_15,C2_32	C1_2,C2_1	Yes
ENSG00000138071	ACTR2	chr2:65467065-65473687	+	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,15,30	65467096,65469183,65469197,65473658	No	No	No	bcc_32692|Cycle_0|Type_1	31,30	65467096,65473658	psi1:0.167567567568,psi2:0	C1_31,C2_0	C1_154,C2_34	Yes
ENSG00000138709	LARP1B	chr4:128999086-129003381	+	altA	33	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):129003320,128999117	31,62	128999117,129003320	No	Yes	No	bcc_47505|Cycle_8|Type_1	31,29	128999117,129003353	psi1:1.0,psi2:0.909090909091	C1_15,C2_30	C1_0,C2_3	Yes
ENSG00000164050	PLXNB1	chr3:48460745-48461113	-	altD	98	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):48460986,48460775	30,128	48460775,48460986	No	No	No	bcc_46694|Cycle_0|Type_1	30,30	48460775,48461084	psi1:0.909090909091,psi2:1.0	C1_10,C2_5	C1_1,C2_0	Yes
ENSG00000198752	CDC42BPB	chr14:103412972-103414085	-	altA	19	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):103414058,103413021	49,28	103413021,103414058	No	No	No	bcc_42054|Cycle_0|Type_1	30,28	103413002,103414058	psi1:0.888888888889,psi2:1.0	C1_24,C2_9	C1_3,C2_0	Yes
ENSG00000149187	CELF1	chr11:47500461-47504275	-	altA	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	43,29	47500504,47504247	No	No	No	bcc_22928|Cycle_0|Type_1	31,29	47500492,47504247	psi1:1.0,psi2:0.888888888889	C1_6,C2_16	C1_0,C2_2	Yes
ENSG00000174428	GTF2IRD2B	chr7:74558441-74563529	+	ES	29	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,29,30	74558472,74559757,74559785,74563500	Yes	No	No	bcc_19352|Cycle_0|Type_1	31,30	74558472,74563500	psi1:0.857142857143,psi2:0.714285714286	C1_6,C2_5	C1_1,C2_2	Yes
ENSG00000196275	GTF2IRD2	chr7:74212574-74217669	-	ES	29	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,29,31	74212604,74216326,74216354,74217639	Yes	No	No	bcc_19352|Cycle_0|Type_1	30,31	74212604,74217639	psi1:0.857142857143,psi2:0.714285714286	C1_6,C2_5	C1_1,C2_2	Yes
ENSG00000132676	DAP3	chr1:155686889-155695202	+	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,102,30	155686919,155691308,155691409,155695173	No	Yes	No	bcc_19045|Cycle_2|Type_1	30,30	155686919,155695173	psi1:0.892857142857,psi2:0.975903614458	C1_25,C2_81	C1_3,C2_2	Yes
ENSG00000183077	AFMID	chr17:76198801-76203020	+	ES_MULTI	441	No	Yes	protein_coding	all_splice_sites_known_(12_ss)	31,86,73,98,79,105,29	76198832,76200737,76200822,76200909,76200981,76201174,76201271,76201521,76201599,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_2|Type_1	31,29	76198832,76202992	psi1:0.8125,psi2:0.964285714286	C1_13,C2_243	C1_3,C2_9	Yes
ENSG00000164970	FAM219A	chr9:34401088-34401694	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	34401120,34401664	No	No	No	bcc_67709|Cycle_0|Type_1	29,31	34401117,34401664	psi1:0.78125,psi2:1.0	C1_25,C2_4	C1_7,C2_0	Yes
ENSG00000176261	ZBTB8OS	chr1:33093114-33116060	-	ES_MULTI	230	Yes	-	protein_coding	all_splice_sites_known_(8_ss)	31,83,122,25,31	33093145,33099246,33099328,33099552,33099673,33100369,33100393,33116030	No	Yes	No	bcc_8003|Cycle_8|Type_1	31,31	33093145,33116030	psi1:1.0,psi2:0.934782608696	C1_37,C2_43	C1_0,C2_3	Yes
ENSG00000103051	COG4	chr16:70531262-70534891	-	ES	119	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,119,31	70531290,70531840,70531958,70534861	No	No	No	bcc_53045|Cycle_0|Type_1	28,31	70531290,70534861	psi1:0.928571428571,psi2:1.0	C1_26,C2_19	C1_2,C2_0	Yes
ENSG00000135778	NTPCR	chr1:233092159-233113936	+	ES	210	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,210,28	233092189,233105655,233105864,233113909	No	No	No	bcc_47867|Cycle_1|Type_1	30,28	233092189,233113909	psi1:0.942028985507,psi2:1.0	C1_65,C2_70	C1_4,C2_0	Yes
ENSG00000160828	STAG3L2	chr7:74300609-74303834	-	ES	124	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	29,124,31	74300638,74301137,74301260,74303804	Yes	No	No	bcc_26378|Cycle_0|Type_1	29,31	74300638,74303804	psi1:0.84,psi2:0.666666666667	C1_42,C2_8	C1_8,C2_4	Yes
ENSG00000205583	STAG3L1	chr7:74991327-74994552	+	ES	124	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	31,124,29	74991358,74993902,74994025,74994524	Yes	No	No	bcc_26378|Cycle_0|Type_1	31,29	74991358,74994524	psi1:0.84,psi2:0.666666666667	C1_42,C2_8	C1_8,C2_4	Yes
ENSG00000174353	STAG3L3	chr7:72470353-72473574	-	ES	124	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	29,124,31	72470382,72470881,72471004,72473544	Yes	No	No	bcc_26378|Cycle_0|Type_1	29,31	72470382,72473544	psi1:0.84,psi2:0.666666666667	C1_42,C2_8	C1_8,C2_4	Yes
ENSG00000145349	CAMK2D	chr4:114375640-114378521	-	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,96,31	114375671,114376882,114376977,114378491	No	Yes	No	bcc_10668|Cycle_1|Type_1	31,31	114375671,114378491	psi1:0.27027027027,psi2:0.5	C1_10,C2_3	C1_27,C2_3	Yes
ENSG00000131374	TBC1D5	chr3:17447989-17549994	-	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,70,29	17448018,17469942,17470011,17549966	No	No	No	bcc_59450|Cycle_0|Type_1	29,29	17448018,17549966	psi1:0.738095238095,psi2:0.5	C1_31,C2_3	C1_11,C2_3	Yes
ENSG00000119787	ATL2	chr2:38523228-38525316	-	ES_altA	492	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	504,15,31	38523732,38523828,38523842,38525286	No	No	No	bcc_41575|Cycle_0|Type_1	27,31	38523255,38525286	psi1:0.9375,psi2:0.79746835443	C1_30,C2_63	C1_2,C2_16	Yes
ENSG00000136754	ABI1	chr10:27044639-27054177	-	ES	174	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,174,31	27044670,27047991,27048164,27054147	No	Yes	No	bcc_35435|Cycle_0|Type_1	31,31	27044670,27054147	psi1:0.921052631579,psi2:1.0	C1_35,C2_21	C1_3,C2_0	Yes
ENSG00000137106	GRHPR	chr9:37422771-37424872	+	altD	28	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	59,31	37422830,37424842	No	No	No	bcc_61141|Cycle_0|Type_1	31,31	37422802,37424842	psi1:0.6,psi2:0.786885245902	C1_9,C2_48	C1_6,C2_13	Yes
ENSG00000109107	ALDOC	chr17:26902531-26903849	-	ES	56	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,56,31	26902562,26902983,26903038,26903819	No	No	No	bcc_20243|Cycle_0|Type_1	31,31	26902562,26903819	psi1:0.289855072464,psi2:0.583333333333	C1_40,C2_7	C1_98,C2_5	Yes
ENSG00000099290	FAM21A	chr10:51885179-51887372	+	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,123,30	51885209,51885817,51885939,51887343	Yes	Yes	No	bcc_42745|Cycle_1|Type_1	30,30	51885209,51887343	psi1:0.9,psi2:1.0	C1_36,C2_15	C1_4,C2_0	Yes
ENSG00000172661	FAM21C	chr10:46280319-46282512	+	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,123,30	46280349,46280957,46281079,46282483	Yes	Yes	No	bcc_42745|Cycle_1|Type_1	30,30	46280349,46282483	psi1:0.9,psi2:1.0	C1_36,C2_15	C1_4,C2_0	Yes
ENSG00000143374	TARS2	chr1:150469074-150470035	+	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,99,30	150469104,150469286,150469384,150470006	No	No	No	bcc_25630|Cycle_0|Type_1	30,30	150469104,150470006	psi1:1.0,psi2:0.882352941176	C1_5,C2_15	C1_0,C2_2	Yes
ENSG00000070010	UFD1L	chr22:19462592-19463049	-	altD	26	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,57	19462623,19462993	No	No	No	bcc_60921|Cycle_0|Type_1	31,31	19462623,19463019	psi1:0.878787878788,psi2:0.966666666667	C1_29,C2_58	C1_4,C2_2	Yes
ENSG00000131467	PSME3	chr17:40985493-40986391	+	altD	168	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	197,31	40985690,40986361	No	No	No	bcc_49609|Cycle_0|Type_1	29,31	40985522,40986361	psi1:0.935483870968,psi2:1.0	C1_29,C2_24	C1_2,C2_0	Yes
ENSG00000002586	CD99	chrX:2632464-2637729	+	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,48,28	2632495,2635646,2635693,2637702	No	Yes	Yes	bcc_55110|Cycle_4|Type_1	31,28	2632495,2637702	psi1:0.94495412844,psi2:1.0	C1_103,C2_116	C1_6,C2_0	Yes
ENSG00000144579	CTDSP1	chr2:219266404-219266865	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	219266435,219266834	No	No	No	bcc_51172|Cycle_2|Type_1	31,29	219266435,219266837	psi1:0.5,psi2:0.307692307692	C1_2,C2_4	C1_2,C2_9	Yes
ENSG00000111144	LTA4H	chr12:96396812-96400122	-	ES	83	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,83,31	96396842,96397616,96397698,96400092	No	No	No	bcc_57342|Cycle_0|Type_1	30,31	96396842,96400092	psi1:0.806451612903,psi2:0.921568627451	C1_25,C2_47	C1_6,C2_4	Yes
ENSG00000107862	GBF1	chr10:104136854-104139071	+	altD	12	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):104136897,104139041	43,31	104136897,104139041	No	No	No	bcc_7117|Cycle_0|Type_1	31,31	104136885,104139041	psi1:0.625,psi2:0.8	C1_15,C2_8	C1_9,C2_2	Yes
ENSG00000183077	AFMID	chr17:76198801-76203020	+	ES_MULTI	491	Yes	Yes	protein_coding	all_splice_sites_known_(12_ss)	31,73,98,79,136,105,29	76198832,76200909,76200981,76201174,76201271,76201521,76201599,76201684,76201819,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_53|Type_1	31,29	76198832,76202992	psi1:0.823529411765,psi2:0.967857142857	C1_14,C2_271	C1_3,C2_9	Yes
ENSG00000169554	ZEB2	chr2:145162563-145187366	-	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,72,31	145162591,145182363,145182434,145187336	No	No	No	bcc_32149|Cycle_0|Type_1	28,31	145162591,145187336	psi1:0.722891566265,psi2:1.0	C1_60,C2_7	C1_23,C2_0	Yes
ENSG00000234009	RPL5P34	chr22:43172566-43172628	-	deletion	3	No	-	pseudogene	no_known_ss	62	43172566	Yes	No	No	bcc_47495|Cycle_0|Type_1	28,31	43172594,43172598	psi1:0.957325746799,psi2:0.859420289855	C1_673,C2_593	C1_30,C2_97	-
ENSG00000229994	RPL5P4	chr1:35816992-35817054	+	deletion	3	No	-	pseudogene	no_known_ss	62	35816992	Yes	No	No	bcc_47495|Cycle_0|Type_1	28,31	35817020,35817024	psi1:0.957325746799,psi2:0.859420289855	C1_673,C2_593	C1_30,C2_97	-
ENSG00000110367	DDX6	chr11:118627966-118630661	-	ES	129	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,129,31	118627996,118629483,118629611,118630631	No	No	No	bcc_7787|Cycle_0|Type_1	30,31	118627996,118630631	psi1:0.904347826087,psi2:1.0	C1_104,C2_45	C1_11,C2_0	Yes
ENSG00000068912	ERLEC1	chr2:54028949-54036380	+	ES	162	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,162,30	54028979,54035436,54035597,54036351	No	No	No	bcc_41737|Cycle_1|Type_1	30,30	54028979,54036351	psi1:0.940594059406,psi2:0.83606557377	C1_95,C2_51	C1_6,C2_10	Yes
ENSG00000141552	ANAPC11	chr17:79849679-79852372	+	ES_altD	71	Yes	-	protein_coding	all_splice_sites_known_(5_ss)	38,63,30	79849717,79851428,79851490,79852343	No	Yes	No	bcc_61328|Cycle_3|Type_1	30,30	79849709,79852343	psi1:1.0,psi2:0.888888888889	C1_14,C2_40	C1_0,C2_5	Yes
ENSG00000092148	HECTD1	chr14:31597181-31602474	-	ES	837	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,837,31	31597212,31597818,31598654,31602444	No	Yes	No	bcc_38849|Cycle_4|Type_1	31,31	31597212,31602444	psi1:0.938596491228,psi2:1.0	C1_107,C2_94	C1_7,C2_0	Yes
ENSG00000101843	PSMD10	chrX:107327661-107327854	-	IR	134	Yes	-	protein_coding	no_known_ss	193	-	No	Yes	No	bcc_37638|Cycle_0|Type_1	28,31	107327689,107327824	psi1:1.0,psi2:0.949367088608	C1_98,C2_75	C1_0,C2_4	(AG:107327824,AA:107327689)
ENSG00000010219	DYRK4	chr12:4721853-4722709	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	4721884,4722678	No	No	No	bcc_54047|Cycle_0|Type_1	31,29	4721884,4722681	psi1:0.916666666667,psi2:0.8	C1_11,C2_8	C1_1,C2_2	Yes
ENSG00000163138	PACRGL	chr4:20706406-20714440	+	ES_MULTI	159	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,68,91,30	20706437,20709426,20709493,20711306,20711396,20714411	No	No	No	bcc_56050|Cycle_0|Type_1	31,30	20706437,20714411	psi1:0.809523809524,psi2:1.0	C1_17,C2_3	C1_4,C2_0	Yes
ENSG00000204104	TRAF3IP1	chr2:239242666-239257436	+	altA	3	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):239256096,239256116,239242676,239257405	10,21,32	239242676,239256096,239256116,239257405	No	No	No	bcc_43107|Cycle_0|Type_1	10,21,29	239242676,239256096,239256116,239257408	psi1:0.857142857143,psi2:1.0	C1_12,C2_3	C1_2,C2_0	Yes
ENSG00000141376	BCAS3	chr17:59445824-59469366	+	ES	91	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,91,29	59445855,59465979,59466069,59469338	No	No	No	bcc_34938|Cycle_0|Type_1	31,29	59445855,59469338	psi1:0.5,psi2:0.666666666667	C1_4,C2_6	C1_4,C2_3	Yes
ENSG00000079974	RABL2B	chr22:51207956-51208363	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	24,31	51207980,51208333	Yes	Yes	Yes	bcc_19563|Cycle_6|Type_1	21,31	51207977,51208333	psi1:0.857142857143,psi2:1.0	C1_12,C2_3	C1_2,C2_0	Yes
ENSG00000144134	RABL2A	chr2:114398551-114398953	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,24	114398582,114398930	Yes	Yes	Yes	bcc_19563|Cycle_6|Type_1	31,21	114398582,114398933	psi1:0.857142857143,psi2:1.0	C1_12,C2_3	C1_2,C2_0	Yes
ENSG00000176623	RMDN1	chr8:87487114-87489553	-	altA	39	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	68,31	87487182,87489523	No	No	No	bcc_12728|Cycle_0|Type_1	29,31	87487143,87489523	psi1:1.0,psi2:0.809523809524	C1_12,C2_68	C1_0,C2_16	Yes
ENSG00000180964	TCEAL8	chrX:102508917-102510033	-	ES	73	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	28,73,28	102508945,102509533,102509605,102510006	No	No	No	bcc_764|Cycle_0|Type_1	28,28	102508945,102510006	psi1:0.861111111111,psi2:1.0	C1_31,C2_8	C1_5,C2_0	Yes
ENSG00000005483	KMT2E	chr7:104750784-104751247	+	altA	294	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,324	104750815,104750924	No	Yes	No	bcc_2285|Cycle_2|Type_1	31,30	104750815,104751218	psi1:0.861111111111,psi2:1.0	C1_31,C2_8	C1_5,C2_0	Yes
ENSG00000101972	STAG2	chrX:123094686-123156409	+	ES	65	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,65,29	123094716,123155217,123155281,123156381	No	No	No	bcc_31401|Cycle_0|Type_1	30,29	123094716,123156381	psi1:0.208333333333,psi2:0	C1_5,C2_0	C1_19,C2_3	Yes
ENSG00000100320	RBFOX2	chr22:36177760-36205857	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	36177793,36205827	No	No	No	bcc_22747|Cycle_0|Type_1	30,31	36177790,36205827	psi1:0.666666666667,psi2:0.5	C1_6,C2_5	C1_3,C2_5	Yes
ENSG00000135838	NPL	chr1:182787964-182794943	+	ES	85	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,85,28	182787994,182791250,182791334,182794916	No	No	No	bcc_50256|Cycle_0|Type_1	30,28	182787994,182794916	psi1:0.75,psi2:0.882352941176	C1_6,C2_15	C1_2,C2_2	Yes
ENSG00000183077	AFMID	chr17:76200950-76202057	+	ES_MULTI	177	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,98,79,31	76200981,76201174,76201271,76201521,76201599,76202027	No	Yes	No	bcc_3143|Cycle_27|Type_1	31,31	76200981,76202027	psi1:1.0,psi2:0.735294117647	C1_3,C2_25	C1_0,C2_9	Yes
ENSG00000168137	SETD5	chr3:9477559-9482167	+	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,39,28	9477590,9478534,9478572,9482140	No	No	No	bcc_58615|Cycle_0|Type_1	31,28	9477590,9482140	psi1:0.368421052632,psi2:0	C1_7,C2_0	C1_12,C2_1	Yes
ENSG00000144741	SLC25A26	chr3:66313772-66413314	+	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,31	66313803,66396788,66396832,66413284	No	No	No	bcc_20207|Cycle_1|Type_1	31,31	66313803,66413284	psi1:1.0,psi2:0.923076923077	C1_14,C2_24	C1_0,C2_2	Yes
ENSG00000169398	PTK2	chr8:141771330-141774363	-	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,21,31	141771361,141772467,141772487,141774333	No	No	No	bcc_14406|Cycle_0|Type_1	31,31	141771361,141774333	psi1:0.322580645161,psi2:0	C1_20,C2_0	C1_42,C2_4	Yes
ENSG00000107223	EDF1	chr9:139756767-139757388	-	altA	151	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	181,31	139756948,139757358	No	No	No	bcc_58609|Cycle_0|Type_1	30,31	139756797,139757358	psi1:0.0612244897959,psi2:0.166666666667	C1_15,C2_37	C1_230,C2_185	Yes
ENSG00000141127	PRPSAP2	chr17:18827267-18833882	+	ES	147	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,147,30	18827297,18832124,18832270,18833853	No	No	No	bcc_51958|Cycle_0|Type_1	30,30	18827297,18833853	psi1:1.0,psi2:0.941176470588	C1_29,C2_32	C1_0,C2_2	Yes
ENSG00000166002	SMCO4	chr11:93212406-93232472	-	altA	15	No	-	protein_coding	all_splice_sites_known_(3_ss)	44,31	93212450,93232442	No	No	No	bcc_67631|Cycle_0|Type_1	29,31	93212435,93232442	psi1:0.5,psi2:0.173913043478	C1_1,C2_8	C1_1,C2_38	Yes
ENSG00000116688	MFN2	chr1:12040510-12049252	+	ES	145	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,145,31	12040541,12042027,12042171,12049222	No	No	No	bcc_34329|Cycle_0|Type_1	31,31	12040541,12049222	psi1:0.934426229508,psi2:1.0	C1_57,C2_42	C1_4,C2_0	Yes
ENSG00000067221	STOML1	chr15:74281115-74282722	-	ES	150	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,150,31	74281143,74281449,74281598,74282692	No	No	No	bcc_73950|Cycle_0|Type_1	28,31	74281143,74282692	psi1:0.75,psi2:0.888888888889	C1_12,C2_8	C1_4,C2_1	Yes
ENSG00000156831	NSMCE2	chr8:126104169-126163443	+	ES_MULTI	267	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,96,171,31	126104200,126114293,126114388,126114559,126114729,126163413	No	Yes	No	bcc_60491|Cycle_5|Type_1	31,31	126104200,126163413	psi1:0.921052631579,psi2:1.0	C1_35,C2_19	C1_3,C2_0	Yes
ENSG00000183576	SETD3	chr14:99925494-99929852	-	ES	149	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,149,30	99925522,99927529,99927677,99929823	No	No	No	bcc_37706|Cycle_0|Type_1	28,30	99925522,99929823	psi1:0.921052631579,psi2:1.0	C1_70,C2_38	C1_6,C2_0	Yes
ENSG00000163539	CLASP2	chr3:33673834-33686279	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	33673866,33686249	No	No	No	bcc_23696|Cycle_0|Type_1	29,31	33673863,33686249	psi1:0.416666666667,psi2:0	C1_10,C2_0	C1_14,C2_1	Yes
ENSG00000132676	DAP3	chr1:155658934-155679593	+	altD	69	No	-	protein_coding	all_splice_sites_known_(3_ss)	100,30	155659034,155679564	No	No	No	bcc_19044|Cycle_0|Type_1	31,30	155658965,155679564	psi1:0.666666666667,psi2:0.5	C1_8,C2_4	C1_4,C2_4	Yes
ENSG00000123472	ATPAF1	chr1:47101611-47118283	-	ES_MULTI	204	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,108,96,31	47101642,47108866,47108973,47110833,47110928,47118253	No	No	No	bcc_21239|Cycle_0|Type_1	31,31	47101642,47118253	psi1:0.915151515152,psi2:0.991304347826	C1_151,C2_114	C1_14,C2_1	Yes
ENSG00000101365	IDH3B	chr20:2639140-2639361	+	IR	163	Yes	Yes	protein_coding	no_known_ss	221	-	No	No	No	bcc_58566|Cycle_0|Type_1	27,31	2639167,2639331	psi1:1.0,psi2:0.922077922078	C1_39,C2_71	C1_0,C2_6	(CC:2639167,TC:2639331)
ENSG00000126091	ST3GAL3	chr1:44365368-44395833	+	ES_MULTI	294	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,147,147,30	44365399,44386076,44386222,44386454,44386600,44395804	No	No	No	bcc_63851|Cycle_0|Type_1	31,30	44365399,44395804	psi1:0.894736842105,psi2:1.0	C1_34,C2_12	C1_4,C2_0	Yes
ENSG00000140829	DHX38	chr16:72130880-72132572	+	ES	105	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,105,29	72130908,72131576,72131680,72132544	No	Yes	No	bcc_44030|Cycle_6|Type_1	28,29	72130908,72132544	psi1:0.894736842105,psi2:1.0	C1_17,C2_6	C1_2,C2_0	Yes
ENSG00000109686	SH3D19	chr4:152065172-152069103	-	ES	69	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,69,30	152065202,152065372,152065440,152069074	No	No	No	bcc_33875|Cycle_0|Type_1	30,30	152065202,152069074	psi1:0.25,psi2:0.5	C1_1,C2_14	C1_3,C2_14	Yes
ENSG00000115414	FN1	chr2:216236709-216236861	-	IR	93	No	Yes	protein_coding	no_known_ss	152	-	No	Yes	No	bcc_27754|Cycle_5|Type_1	29,30	216236738,216236832	psi1:0.368421052632,psi2:0.130434782609	C1_14,C2_72	C1_24,C2_480	Yes
ENSG00000115875	SRSF7	chr2:38976460-38976699	-	IR	182	Yes	Yes	protein_coding	no_known_ss	239	-	No	Yes	No	bcc_31545|Cycle_5|Type_1	28,29	38976488,38976671	psi1:0.933333333333,psi2:0.818181818182	C1_14,C2_18	C1_1,C2_4	Yes
ENSG00000113712	CSNK1A1	chr5:148892743-148899882	-	ES	84	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,84,30	148892772,148897357,148897440,148899853	No	No	No	bcc_1706|Cycle_0|Type_1	29,30	148892772,148899853	psi1:0.485981308411,psi2:0.294117647059	C1_52,C2_10	C1_55,C2_24	Yes
ENSG00000037042	TUBG2	chr17:40812694-40815019	+	ES	27	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):40814991,40812725	31,27,29	40812725,40813219,40813245,40814991	No	No	No	bcc_54037|Cycle_0|Type_1	31,29	40812725,40814991	psi1:0.195652173913,psi2:0	C1_9,C2_0	C1_37,C2_6	Yes
ENSG00000257103	LSM14A	chr19:34719446-34719507	+	deletion	3	No	-	protein_coding	no_known_ss	61	34719446	No	No	No	bcc_9783|Cycle_0|Type_1	27,31	34719473,34719477	psi1:0.428571428571,psi2:0.611111111111	C1_3,C2_11	C1_4,C2_7	-
ENSG00000175061	FAM211A-AS1	chr17:16342698-16343528	+	ES	176	Yes	-	processed_transcript	all_splice_sites_known_(4_ss)	30,176,30	16342728,16342842,16343017,16343499	No	Yes	No	bcc_27470|Cycle_7|Type_1	30,30	16342728,16343499	psi1:0.716216216216,psi2:0.546762589928	C1_53,C2_76	C1_21,C2_63	Yes
ENSG00000164062	APEH	chr3:49713368-49713840	+	ES	164	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,164,30	49713399,49713489,49713652,49713811	No	No	No	bcc_55383|Cycle_0|Type_1	31,30	49713399,49713811	psi1:0.950819672131,psi2:1.0	C1_58,C2_72	C1_3,C2_0	Yes
ENSG00000138069	RAB1A	chr2:65315793-65325133	-	ES	132	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,132,29	65315824,65316073,65316204,65325105	No	Yes	No	bcc_33706|Cycle_1|Type_1	31,29	65315824,65325105	psi1:0.946058091286,psi2:1.0	C1_228,C2_232	C1_13,C2_0	Yes
ENSG00000080819	CPOX	chr3:98297084-98304315	-	ES_MULTI	184	Yes	Yes	protein_coding	4_ss_annotated_(over_6_ss):98300355,98300251,98304285,98299614	30,79,105,31	98297114,98299536,98299614,98300251,98300355,98304285	No	No	No	bcc_47670|Cycle_0|Type_1	30,31	98297114,98304285	psi1:1.0,psi2:0.9375	C1_23,C2_30	C1_0,C2_2	Yes
ENSG00000121579	NAA50	chr3:113442909-113464819	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	113442942,113464789	No	No	No	bcc_42783|Cycle_0|Type_1	30,31	113442939,113464789	psi1:0.90625,psi2:0.785714285714	C1_29,C2_11	C1_3,C2_3	Yes
ENSG00000138709	LARP1B	chr4:129003429-129012532	+	ES	144	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,144,31	129003460,129012156,129012299,129012502	No	Yes	Yes	bcc_47505|Cycle_2|Type_1	31,31	129003460,129012502	psi1:1.0,psi2:0.913043478261	C1_19,C2_42	C1_0,C2_4	Yes
ENSG00000196821	C6orf106	chr6:34574651-34622432	-	ES	198	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,198,31	34574681,34614378,34614575,34622402	No	No	No	bcc_33621|Cycle_0|Type_1	30,31	34574681,34622402	psi1:0.906040268456,psi2:0.983739837398	C1_135,C2_121	C1_14,C2_2	Yes
ENSG00000095485	CWF19L1	chr10:101995493-101997809	-	ES	120	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,120,31	101995521,101996607,101996726,101997779	No	No	No	bcc_17970|Cycle_0|Type_1	28,31	101995521,101997779	psi1:0.944444444444,psi2:0.846153846154	C1_34,C2_22	C1_2,C2_4	Yes
ENSG00000157020	SEC13	chr3:10342802-10345739	-	altA	227	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	256,30	10343058,10345710	No	Yes	Yes	bcc_53476|Cycle_3|Type_1	29,30	10342831,10345710	psi1:0.950495049505,psi2:0.829694323144	C1_96,C2_190	C1_5,C2_39	Yes
ENSG00000129351	ILF3	chr19:10798353-10799885	+	ES	129	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,129,31	10798384,10799226,10799354,10799855	No	No	No	bcc_57091|Cycle_0|Type_1	31,31	10798384,10799855	psi1:0.924528301887,psi2:1.0	C1_49,C2_27	C1_4,C2_0	Yes
ENSG00000142512	SIGLEC10	chr19:51920002-51920366	-	altA	174	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	202,31	51920204,51920336	No	No	No	bcc_66176|Cycle_0|Type_1	28,31	51920030,51920336	psi1:0.823529411765,psi2:1.0	C1_28,C2_5	C1_6,C2_0	Yes
ENSG00000112031	MTRF1L	chr6:153311202-153314022	-	ES	137	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,137,31	153311230,153312320,153312456,153313992	No	No	No	bcc_19330|Cycle_0|Type_1	28,31	153311230,153313992	psi1:0.818181818182,psi2:0.925925925926	C1_18,C2_25	C1_4,C2_2	Yes
ENSG00000110514	MADD	chr11:47312336-47315464	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,31	47312367,47314094,47314147,47315434	No	No	No	bcc_54684|Cycle_0|Type_1	31,31	47312367,47315434	psi1:0.614035087719,psi2:0	C1_35,C2_0	C1_22,C2_1	Yes
ENSG00000135597	REPS1	chr6:139226240-139229835	-	ES	106	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,106,31	139226269,139228632,139228737,139229805	No	No	No	bcc_50961|Cycle_0|Type_1	29,31	139226269,139229805	psi1:0.985074626866,psi2:0.910256410256	C1_66,C2_71	C1_1,C2_7	Yes
ENSG00000186868	MAPT	chr17:44074004-44091639	+	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	26,93,31	44074030,44087676,44087768,44091609	No	No	No	bcc_15593|Cycle_0|Type_1	26,31	44074030,44091609	psi1:0.493150684932,psi2:1.0	C1_36,C2_2	C1_37,C2_0	Yes
-	unknown_gene	chr9:67056302-67065970	0	alt	86	Yes	-	-	no_ss	31,117	67056333,67065854	Yes	No	No	bcc_58071|Cycle_3|Type_1	31,31	67056333,67065940	psi1:0.857142857143,psi2:0.666666666667	C1_6,C2_20	C1_1,C2_10	-
-	unknown_gene	chr9:69616464-69626064	0	alt	86	Yes	-	-	no_ss	117,31	69616581,69626034	Yes	No	No	bcc_58071|Cycle_3|Type_1	31,31	69616495,69626034	psi1:0.857142857143,psi2:0.666666666667	C1_6,C2_20	C1_1,C2_10	-
ENSG00000100722	ZC3H14	chr14:89075716-89076086	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	89075747,89076056	No	No	No	bcc_24959|Cycle_0|Type_1	31,28	89075747,89076059	psi1:0.76,psi2:0.608695652174	C1_19,C2_14	C1_6,C2_9	Yes
ENSG00000168610	STAT3	chr17:40469211-40474332	-	altD	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	40469242,40474300	No	No	No	bcc_8720|Cycle_0|Type_1	31,30	40469242,40474303	psi1:0.738461538462,psi2:0.867346938776	C1_48,C2_85	C1_17,C2_13	Yes
ENSG00000061676	NCKAP1	chr2:183868016-183888563	-	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):183868053,183888534	37,30	183868053,183888534	No	No	No	bcc_43978|Cycle_0|Type_1	31,30	183868047,183888534	psi1:0.833333333333,psi2:0.95	C1_35,C2_19	C1_7,C2_1	Yes
ENSG00000118292	C1orf54	chr1:150249009-150252084	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):150249040,150252054	31,34	150249040,150252051	No	No	No	bcc_63482|Cycle_0|Type_1	31,31	150249040,150252054	psi1:0.423076923077,psi2:0	C1_11,C2_0	C1_15,C2_1	Yes
ENSG00000122566	HNRNPA2B1	chr7:26230722-26231072	+	IR	293	Yes	-	protein_coding	no_known_ss	350	-	No	Yes	No	bcc_6802|Cycle_1|Type_1	26,31	26230748,26231042	psi1:0.985714285714,psi2:0.9125	C1_69,C2_73	C1_1,C2_7	(CT:26230748,AC:26231042)
ENSG00000108961	RANGRF	chr17:8192875-8193161	+	IR	224	Yes	Yes	protein_coding	no_known_ss	286	-	No	No	No	bcc_66664|Cycle_0|Type_1	31,31	8192906,8193131	psi1:0.666666666667,psi2:0.809523809524	C1_14,C2_17	C1_7,C2_4	Yes
ENSG00000114416	FXR1	chr3:180680699-180680845	+	IR	87	No	Yes	protein_coding	no_known_ss	146	-	No	No	No	bcc_46118|Cycle_0|Type_1	29,30	180680728,180680816	psi1:0.356164383562,psi2:0.555555555556	C1_26,C2_10	C1_47,C2_8	Yes
ENSG00000225648	SBDSP1	chr7:72300331-72302211	+	ES	122	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	31,122,30	72300362,72301272,72301393,72302182	No	Yes	No	bcc_44738|Cycle_4|Type_1	31,30	72300362,72302182	psi1:0.935483870968,psi2:0.823529411765	C1_58,C2_14	C1_4,C2_3	Yes
ENSG00000092421	SEMA6A	chr5:115783477-115811249	-	ES	165	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,165,21,9	115783507,115803279,115803443,115808769,115808789,115811241	No	Yes	No	bcc_42955|Cycle_0|Type_1	30,21,9	115783507,115808769,115808789,115811241	psi1:0.855072463768,psi2:1.0	C1_59,C2_13	C1_10,C2_0	Yes
ENSG00000123562	MORF4L2	chrX:102933497-102940128	-	ES	49	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,49,30	102933528,102939609,102939657,102940099	No	Yes	No	bcc_30877|Cycle_5|Type_1	31,30	102933528,102940099	psi1:0.383561643836,psi2:0.227272727273	C1_28,C2_10	C1_45,C2_34	Yes
ENSG00000079819	EPB41L2	chr6:131184830-131206266	-	ES_MULTI	222	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	28,99,123,31	131184858,131186676,131186774,131188599,131188721,131206236	No	Yes	No	bcc_46240|Cycle_2|Type_1	28,31	131184858,131206236	psi1:0.855855855856,psi2:1.0	C1_95,C2_21	C1_16,C2_0	Yes
ENSG00000009954	BAZ1B	chr7:72912840-72913010	-	IR	108	No	Yes	protein_coding	no_known_ss	170	-	No	No	No	bcc_63393|Cycle_0|Type_1	31,31	72912871,72912980	psi1:0.914285714286,psi2:1.0	C1_32,C2_14	C1_3,C2_0	(CA:72912980,TC:72912871)
ENSG00000141027	NCOR1	chr17:16005042-16012130	-	altA	48	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	77,31	16005119,16012100	No	No	No	bcc_47118|Cycle_0|Type_1	29,31	16005071,16012100	psi1:0.869565217391,psi2:1.0	C1_20,C2_5	C1_3,C2_0	Yes
ENSG00000008517	IL32	chr16:3115464-3115814	+	ES_altA	49	Yes	-	protein_coding	all_splice_sites_known_(5_ss)	31,46,33	3115495,3115643,3115688,3115782	No	Yes	No	bcc_25856|Cycle_3|Type_1	31,30	3115495,3115785	psi1:0,psi2:0.2	C1_0,C2_5	C1_3,C2_20	Yes
ENSG00000101605	MYOM1	chr18:3090769-3100187	-	ES	137	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,137,31	3090800,3094168,3094304,3100157	No	No	No	bcc_12749|Cycle_0|Type_1	31,31	3090800,3100157	psi1:1.0,psi2:0.933333333333	C1_18,C2_28	C1_0,C2_2	Yes
ENSG00000144674	GOLGA4	chr3:37396647-37407626	+	ES_altA	89	Yes	Yes	protein_coding	4_ss_annotated_(over_5_ss):37407571,37402796,37402734,37396678	31,63,56	37396678,37402734,37402796,37407571	No	Yes	No	bcc_39603|Cycle_2|Type_1	31,30	37396678,37407597	psi1:1.0,psi2:0.914893617021	C1_19,C2_43	C1_0,C2_4	Yes
ENSG00000105518	TMEM205	chr19:11456274-11456713	-	IR	379	Yes	-	protein_coding	no_known_ss	439	-	No	Yes	No	bcc_63141|Cycle_10|Type_1	30,30	11456304,11456684	psi1:0.96511627907,psi2:0.866666666667	C1_83,C2_13	C1_3,C2_2	Yes
ENSG00000008517	IL32	chr16:3115657-3115812	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,31	3115688,3115782	No	Yes	No	bcc_25856|Cycle_9|Type_1	31,28	3115688,3115785	psi1:0,psi2:0.181818181818	C1_0,C2_4	C1_3,C2_18	Yes
ENSG00000136146	MED4	chr13:48664524-48669225	-	altD	106	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,136	48664554,48669090	No	No	No	bcc_17252|Cycle_0|Type_1	30,30	48664554,48669196	psi1:0.857142857143,psi2:0.727272727273	C1_12,C2_8	C1_2,C2_3	Yes
ENSG00000108465	CDK5RAP3	chr17:46058693-46058981	+	IR	127	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	7,179	-	No	No	No	bcc_62495|Cycle_0|Type_1	7,23,29	46058700,46058803,46058825,46058953	psi1:1.0,psi2:0.908045977011	C1_31,C2_79	C1_0,C2_8	Yes
ENSG00000137955	RABGGTB	chr1:76257225-76257909	+	altA	16	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):76257256,76257866	31,44	76257256,76257866	No	No	No	bcc_54268|Cycle_2|Type_1	31,28	76257256,76257882	psi1:0.928571428571,psi2:1.0	C1_65,C2_37	C1_5,C2_0	Yes
ENSG00000128641	MYO1B	chr2:192265165-192267386	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,87,29	192265194,192265475,192265561,192267358	No	Yes	No	bcc_10838|Cycle_0|Type_1	29,29	192265194,192267358	psi1:0.904761904762,psi2:0.78125	C1_19,C2_25	C1_2,C2_7	Yes
ENSG00000080822	CLDND1	chr3:98240510-98241723	-	altA	22	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	52,31	98240562,98241693	No	Yes	No	bcc_34239|Cycle_2|Type_1	30,31	98240540,98241693	psi1:0.45652173913,psi2:0	C1_42,C2_0	C1_50,C2_3	Yes
ENSG00000198931	APRT	chr16:88876084-88876508	-	altA	134	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	164,31	88876248,88876478	No	No	No	bcc_67039|Cycle_0|Type_1	30,31	88876114,88876478	psi1:0.642857142857,psi2:0.848484848485	C1_9,C2_112	C1_5,C2_20	Yes
ENSG00000182621	PLCB1	chr20:8770877-8862297	+	ES	118	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,118,29	8770908,8782703,8782820,8862269	No	No	No	bcc_37537|Cycle_0|Type_1	31,29	8770908,8862269	psi1:0.459770114943,psi2:1.0	C1_40,C2_2	C1_47,C2_0	Yes
ENSG00000239779	WBP1	chr2:74685767-74686799	+	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,102,30	74685798,74686124,74686225,74686770	Yes	Yes	No	bcc_63203|Cycle_6|Type_1	31,30	74685798,74686770	psi1:0.428571428571,psi2:0.6	C1_9,C2_6	C1_12,C2_4	Yes
ENSG00000225663,ENSG00000215621	FAM195B,AC174470.1	chr17:79781156-79782190	-	ES	102	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,102,28	79781187,79781288,79781389,79782163	No	No	No	bcc_30061|Cycle_1|Type_1	31,28	79781187,79782163	psi1:0.977777777778,psi2:0.9	C1_44,C2_9	C1_1,C2_1	Yes
ENSG00000136717	BIN1	chr2:127821565-127826530	-	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,93,31	127821594,127825739,127825831,127826500	No	No	No	bcc_38924|Cycle_0|Type_1	29,31	127821594,127826500	psi1:0.298245614035,psi2:0	C1_68,C2_0	C1_160,C2_15	Yes
ENSG00000236882	C5orf27	chr5:95194623-95195221	+	IR	539	Yes	Yes	protein_coding	no_known_ss	598	-	No	No	No	bcc_29084|Cycle_0|Type_1	30,29	95194653,95195193	psi1:0.833333333333,psi2:0.992967651195	C1_5,C2_706	C1_1,C2_5	Yes
ENSG00000123562	MORF4L2	chrX:102933497-102939639	-	altA	51	No	-	protein_coding	all_splice_sites_known_(3_ss)	82,31	102933579,102939609	No	Yes	No	bcc_30877|Cycle_10|Type_1	31,31	102933528,102939609	psi1:0.644444444444,psi2:0.47619047619	C1_29,C2_10	C1_16,C2_11	Yes
ENSG00000126709	IFI6	chr1:27995016-27995784	-	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,41	27995046,27995744	No	No	No	bcc_26704|Cycle_0|Type_1	30,29	27995046,27995756	psi1:0.125,psi2:0.04	C1_2,C2_1	C1_14,C2_24	Yes
ENSG00000112851	ERBB2IP	chr5:65340095-65342211	+	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	43,31	65340138,65342181	No	No	No	bcc_31198|Cycle_0|Type_1	31,31	65340126,65342181	psi1:0.9,psi2:0.777777777778	C1_45,C2_14	C1_5,C2_4	Yes
ENSG00000183077	AFMID	chr17:76198801-76203020	+	ES_MULTI	355	Yes	Yes	protein_coding	all_splice_sites_known_(10_ss)	31,73,98,79,105,29	76198832,76200909,76200981,76201174,76201271,76201521,76201599,76202027,76202131,76202992	No	Yes	No	bcc_3143|Cycle_3|Type_1	31,29	76198832,76202992	psi1:0.823529411765,psi2:0.95871559633	C1_14,C2_209	C1_3,C2_9	Yes
ENSG00000137500	CCDC90B	chr11:82985754-82996946	-	ES_MULTI	224	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,104,120,31	82985783,82989769,82989872,82991184,82991303,82996916	No	Yes	No	bcc_50331|Cycle_4|Type_1	29,31	82985783,82996916	psi1:0.952380952381,psi2:1.0	C1_40,C2_45	C1_2,C2_0	Yes
ENSG00000138030	KHK	chr2:27315285-27317375	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):27317345,27315316	31,34	27315316,27317342	No	Yes	No	bcc_28734|Cycle_1|Type_1	31,31	27315316,27317345	psi1:0,psi2:0.236363636364	C1_0,C2_13	C1_5,C2_42	Yes
ENSG00000084072	PPIE	chr1:40209566-40211114	+	altA	39	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,68	40209596,40211047	No	Yes	No	bcc_17553|Cycle_2|Type_1	30,29	40209596,40211086	psi1:0.888888888889,psi2:1.0	C1_24,C2_7	C1_3,C2_0	Yes
ENSG00000116752	BCAS2	chr1:115118341-115123949	-	ES	71	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,71,30	115118372,115119309,115119379,115123920	No	No	No	bcc_52489|Cycle_0|Type_1	31,30	115118372,115123920	psi1:0.883333333333,psi2:1.0	C1_106,C2_29	C1_14,C2_0	Yes
ENSG00000090539	CHRD	chr3:184101399-184102408	+	altA	54	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):184102325,184101430	31,84	184101430,184102325	No	No	No	bcc_73446|Cycle_0|Type_1	31,30	184101430,184102379	psi1:1.0,psi2:0.866666666667	C1_3,C2_13	C1_0,C2_2	Yes
ENSG00000214078,ENSG00000244462	CPNE1,RBM12	chr20:34243236-34252711	-	ES	53	Yes	-	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,53,30	34243266,34246852,34246904,34252682	No	Yes	No	bcc_6829|Cycle_4|Type_1	30,30	34243266,34252682	psi1:0.8125,psi2:1.0	C1_13,C2_2	C1_3,C2_0	Yes
ENSG00000163113	OTUD7B	chr1:149943149-149982426	-	ES	151	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,151,30	149943179,149949361,149949511,149982397	No	No	No	bcc_59406|Cycle_0|Type_1	30,30	149943179,149982397	psi1:0.9,psi2:1.0	C1_18,C2_6	C1_2,C2_0	Yes
ENSG00000135148	TRAFD1	chr12:112580068-112583425	+	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):112580099,112583390	31,36	112580099,112583390	No	No	No	bcc_59361|Cycle_1|Type_1	31,30	112580099,112583396	psi1:0.75,psi2:1.0	C1_9,C2_1	C1_3,C2_0	Yes
ENSG00000165102	HGSNAT	chr8:43056259-43056357	-	deletion	39	No	-	protein_coding	no_known_ss	98	43056259	No	No	No	bcc_57230|Cycle_0|Type_1	28,31	43056287,43056327	psi1:1.0,psi2:0.928571428571	C1_14,C2_26	C1_0,C2_2	-
ENSG00000177200	CHD9	chr16:53341787-53342628	+	altD	48	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	78,31	53341865,53342598	No	No	No	bcc_49375|Cycle_0|Type_1	30,31	53341817,53342598	psi1:0.75,psi2:1.0	C1_9,C2_1	C1_3,C2_0	Yes
ENSG00000169220	RGS14	chr5:176798367-176798902	+	ES	115	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,115,29	176798397,176798476,176798590,176798874	No	No	No	bcc_56187|Cycle_1|Type_1	30,29	176798397,176798874	psi1:0.866666666667,psi2:0.954545454545	C1_13,C2_21	C1_2,C2_1	Yes
ENSG00000198431	TXNRD1	chr12:104680856-104705098	+	ES	110	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,110,31	104680887,104682709,104682818,104705068	No	No	No	bcc_16226|Cycle_1|Type_1	31,31	104680887,104705068	psi1:0.866666666667,psi2:0.954545454545	C1_13,C2_21	C1_2,C2_1	Yes
ENSG00000204790	CBWD6	chr9:69235578-69240043	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,87,31	69235606,69238230,69238316,69240013	Yes	Yes	Yes	bcc_11223|Cycle_23|Type_1	28,31	69235606,69240013	psi1:0.818181818182,psi2:0.923076923077	C1_18,C2_36	C1_4,C2_3	Yes
ENSG00000138162	TACC2	chr10:123971192-123974948	+	altA	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,43	123971223,123974906	No	No	No	bcc_59636|Cycle_0|Type_1	31,31	123971223,123974918	psi1:0.842105263158,psi2:1.0	C1_16,C2_3	C1_3,C2_0	Yes
ENSG00000163686	ABHD6	chr3:58271149-58279343	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):58279316,58271180	31,31	58271180,58279313	No	No	No	bcc_46767|Cycle_0|Type_1	31,28	58271180,58279316	psi1:0.368421052632,psi2:0.210526315789	C1_7,C2_12	C1_12,C2_45	Yes
ENSG00000076242	MLH1	chr3:37053560-37059027	+	ES	113	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,113,31	37053590,37055923,37056035,37058997	No	Yes	No	bcc_52862|Cycle_6|Type_1	30,31	37053590,37058997	psi1:0.948717948718,psi2:1.0	C1_37,C2_35	C1_2,C2_0	Yes
ENSG00000182902	SLC25A18	chr22:18043372-18062537	+	ES_altAD	74	Yes	-	protein_coding	4_ss_annotated_(over_6_ss):18049989,18062511,18050051,18043413	41,63,27	18043413,18049989,18050051,18062511	No	Yes	No	bcc_52202|Cycle_3|Type_1	23,34	18043395,18062504	psi1:0.90625,psi2:1.0	C1_58,C2_21	C1_6,C2_0	(GT:18050051,AG:18062511);(CT:18043395,AC:18062504);(GT:18043413,AG:18049989)
ENSG00000072778	ACADVL	chr17:7126155-7126481	-	IR	267	No	Yes	protein_coding	no_known_ss	326	-	No	No	No	bcc_42975|Cycle_1|Type_1	29,30	7126184,7126452	psi1:0.257142857143,psi2:0.575936883629	C1_9,C2_292	C1_26,C2_215	(AG:7126452,GT:7126184)
ENSG00000137720	C11orf1	chr11:111753291-111754525	+	ES	67	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,67,31	111753322,111753860,111753926,111754495	No	No	No	bcc_53263|Cycle_0|Type_1	31,31	111753322,111754495	psi1:1.0,psi2:0.936170212766	C1_28,C2_44	C1_0,C2_3	Yes
ENSG00000050426	LETMD1	chr12:51442937-51447589	+	ES	116	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,116,29	51442968,51445875,51445990,51447561	No	Yes	No	bcc_42229|Cycle_2|Type_1	31,29	51442968,51447561	psi1:0.882352941176,psi2:1.0	C1_30,C2_8	C1_4,C2_0	Yes
ENSG00000108848	LUC7L3	chr17:48827971-48828136	+	IR	105	No	Yes	protein_coding	no_known_ss	165	-	No	Yes	No	bcc_31020|Cycle_3|Type_1	31,29	48828002,48828108	psi1:0.648351648352,psi2:0.842105263158	C1_59,C2_16	C1_32,C2_3	Yes
ENSG00000159069	FBXW5	chr9:139836105-139836579	-	altD	54	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,82	139836136,139836498	No	No	No	bcc_60843|Cycle_0|Type_1	31,28	139836136,139836552	psi1:0.857142857143,psi2:0.963636363636	C1_6,C2_53	C1_1,C2_2	(AC:139836498,CT:139836136);(GC:139836552,CT:139836136)
ENSG00000118418	HMGN3	chr6:79911415-79913327	-	ES	73	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,73,31	79911443,79912034,79912106,79913297	No	Yes	No	bcc_33987|Cycle_54|Type_1	28,31	79911443,79913297	psi1:1.0,psi2:0.935185185185	C1_62,C2_101	C1_0,C2_7	Yes
ENSG00000198053	SIRPA	chr20:1915370-1917995	+	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	42,30	1915412,1917966	No	No	No	bcc_877|Cycle_0|Type_1	30,30	1915400,1917966	psi1:0.1375,psi2:0	C1_11,C2_0	C1_69,C2_15	Yes
ENSG00000168958	MFF	chr2:228205065-228217260	+	ES_MULTI	234	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,75,159,31	228205096,228207461,228207535,228211942,228212100,228217230	No	Yes	No	bcc_45905|Cycle_7|Type_1	31,31	228205096,228217230	psi1:0.934210526316,psi2:1.0	C1_71,C2_42	C1_5,C2_0	Yes
ENSG00000138758	SEPT11	chr4:77952093-77957953	+	ES_altA	2272	Yes	Yes	protein_coding	3_ss_annotated_(over_5_ss):77957923,77955650,77952123	30,2153,150	77952123,77955650,77957802,77957804	No	Yes	No	bcc_17063|Cycle_30|Type_1	30,31	77952123,77957923	psi1:0.941666666667,psi2:1.0	C1_339,C2_244	C1_21,C2_0	-;(GT:77952123,AG:77957923);(GT:77952123,AG:77955650)
ENSG00000120265	PCMT1	chr6:150123475-150131780	+	altD	47	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	77,29	150123552,150131752	No	No	No	bcc_16590|Cycle_1|Type_1	30,29	150123505,150131752	psi1:0.882845188285,psi2:0.75	C1_211,C2_51	C1_28,C2_17	Yes
ENSG00000266964,ENSG00000221857	FXYD1,CTD-2527I21.4	chr19:35629767-35631009	+	altA	92	Yes	-	protein_coding,processed_transcript	2_ss_annotated_(over_3_ss):35630980,35629798	31,122	35629798,35630888	No	No	No	bcc_25559|Cycle_0|Type_1	31,30	35629798,35630980	psi1:0.164556962025,psi2:0.04	C1_13,C2_1	C1_66,C2_24	Yes
ENSG00000123178	SPRYD7	chr13:50489267-50502088	-	ES_altD	106	Yes	Yes	protein_coding	4_ss_annotated_(over_5_ss):50489296,50495716,50495614,50502055	29,103,34	50489296,50495614,50495716,50502055	No	Yes	No	bcc_16299|Cycle_1|Type_1	29,31	50489296,50502058	psi1:0.990291262136,psi2:0.936170212766	C1_102,C2_44	C1_1,C2_3	Yes
ENSG00000178381	ZFAND2A	chr7:1192738-1195119	-	altA	93	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	122,31	1192860,1195089	No	No	No	bcc_57714|Cycle_0|Type_1	29,31	1192767,1195089	psi1:0.909090909091,psi2:0.983050847458	C1_70,C2_58	C1_7,C2_1	Yes
ENSG00000117625	RCOR3	chr1:211462707-211477453	+	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,78,29	211462738,211469018,211469095,211477425	No	No	No	bcc_49117|Cycle_0|Type_1	31,29	211462738,211477425	psi1:0.92,psi2:1.0	C1_23,C2_10	C1_2,C2_0	Yes
ENSG00000189157,ENSG00000272414	FAM47E,FAM47E-STBD1	chr4:77192890-77204560	+	ES	156	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,156,27	77192921,77199222,77199377,77204534	No	No	No	bcc_58375|Cycle_0|Type_1	31,27	77192921,77204534	psi1:0.916666666667,psi2:1.0	C1_22,C2_9	C1_2,C2_0	Yes
ENSG00000104517	UBR5	chr8:103274267-103277357	-	ES	85	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,85,30	103274298,103276702,103276786,103277328	No	No	No	bcc_43935|Cycle_0|Type_1	31,30	103274298,103277328	psi1:0.923076923077,psi2:1.0	C1_48,C2_22	C1_4,C2_0	Yes
ENSG00000113648	H2AFY	chr5:134696266-134705123	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,28	134696297,134705096	No	No	No	bcc_35379|Cycle_0|Type_1	28,28	134696294,134705096	psi1:0.5,psi2:0.333333333333	C1_23,C2_7	C1_23,C2_14	Yes
ENSG00000171634	BPTF	chr17:65955960-65960357	+	ES	174	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,174,30	65955991,65959449,65959622,65960328	No	No	No	bcc_38828|Cycle_0|Type_1	31,30	65955991,65960328	psi1:0.88,psi2:0.75	C1_22,C2_6	C1_3,C2_2	Yes
ENSG00000147123	NDUFB11	chrX:47001809-47002042	-	altD	30	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,60	47001839,47001983	No	No	No	bcc_57434|Cycle_0|Type_1	30,30	47001839,47002013	psi1:0.3203125,psi2:0.179401993355	C1_41,C2_54	C1_87,C2_247	Yes
ENSG00000127952	STYXL1	chr7:75625887-75633105	-	ES	113	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,113,30	75625917,75630208,75630320,75633076	No	Yes	No	bcc_50810|Cycle_0|Type_1	30,30	75625917,75633076	psi1:0.833333333333,psi2:0.947368421053	C1_5,C2_36	C1_1,C2_2	Yes
ENSG00000076242	MLH1	chr3:37053559-37061830	+	ES_MULTI	207	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,113,94,30	37053590,37055923,37056035,37058997,37059090,37061801	No	Yes	No	bcc_52862|Cycle_3|Type_1	31,30	37053590,37061801	psi1:0.952380952381,psi2:1.0	C1_40,C2_41	C1_2,C2_0	Yes
ENSG00000138758	SEPT11	chr4:77952093-77957953	+	altA	2273	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,2304	77952123,77955650	No	Yes	No	bcc_17063|Cycle_11|Type_1	30,31	77952123,77957923	psi1:0.942148760331,psi2:1.0	C1_342,C2_244	C1_21,C2_0	Yes
ENSG00000214078,ENSG00000244462	CPNE1,RBM12	chr20:34243236-34252712	-	ES	85	Yes	-	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,85,31	34243266,34246852,34246936,34252682	No	Yes	No	bcc_6829|Cycle_3|Type_1	30,31	34243266,34252682	psi1:0.875,psi2:1.0	C1_21,C2_5	C1_3,C2_0	Yes
ENSG00000085433	WDR47	chr1:109547307-109553568	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	109547340,109553538	No	No	No	bcc_43870|Cycle_0|Type_1	30,31	109547337,109553538	psi1:0.275862068966,psi2:0	C1_8,C2_0	C1_21,C2_2	Yes
ENSG00000130731	C16orf13	chr16:684767-685310	-	ES	124	Yes	Yes	protein_coding	3_ss_annotated_(over_4_ss):684889,684797,685281	30,124,30	684797,684889,685012,685281	No	Yes	No	bcc_62804|Cycle_0|Type_1	30,30	684797,685281	psi1:0.576923076923,psi2:0.724137931034	C1_15,C2_21	C1_11,C2_8	Yes
ENSG00000135506	OS9	chr12:58112128-58112802	+	altD	45	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	76,27	58112204,58112776	No	No	No	bcc_45814|Cycle_1|Type_1	31,27	58112159,58112776	psi1:0.970238095238,psi2:0.877813504823	C1_163,C2_273	C1_5,C2_38	(GT:58112159,AG:58112776);(GC:58112204,AG:58112776)
ENSG00000141504	SAT2	chr17:7530082-7530490	-	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,102,30	7530111,7530261,7530362,7530461	No	No	No	bcc_51862|Cycle_1|Type_1	29,30	7530111,7530461	psi1:0.807692307692,psi2:0.921428571429	C1_63,C2_258	C1_15,C2_22	Yes
ENSG00000077380	DYNC1I2	chr2:172563856-172571867	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,60,30	172563887,172569277,172569336,172571838	No	No	No	bcc_37336|Cycle_0|Type_1	31,30	172563887,172571838	psi1:0.230088495575,psi2:0	C1_26,C2_0	C1_87,C2_10	Yes
ENSG00000197323	TRIM33	chr1:114940451-114942109	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,51,31	114940482,114940562,114940612,114942079	No	No	No	bcc_2054|Cycle_0|Type_1	31,31	114940482,114942079	psi1:0.875,psi2:0.666666666667	C1_35,C2_2	C1_5,C2_1	Yes
ENSG00000232388	LINC00493	chr20:18548209-18549911	+	altA	3	No	-	lincRNA	all_splice_sites_known_(3_ss)	31,32	18548240,18549880	No	No	No	bcc_55674|Cycle_0|Type_1	31,29	18548240,18549883	psi1:0.454545454545,psi2:0.290322580645	C1_20,C2_36	C1_24,C2_88	Yes
ENSG00000165233	C9orf89	chr9:95870067-95872878	+	altD	11	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	42,29	95870109,95872850	No	No	No	bcc_70793|Cycle_0|Type_1	31,29	95870098,95872850	psi1:0.4375,psi2:0.25	C1_7,C2_1	C1_9,C2_3	Yes
ENSG00000068745	IP6K2	chr3:48732824-48754620	-	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	30,31	48732854,48754590	No	No	No	bcc_55709|Cycle_0|Type_1	27,31	48732851,48754590	psi1:0.285714285714,psi2:0.5	C1_4,C2_1	C1_10,C2_1	Yes
ENSG00000168488	ATXN2L	chr16:28846691-28846897	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,31	28846720,28846867	No	No	No	bcc_53768|Cycle_0|Type_1	29,28	28846720,28846870	psi1:0.0909090909091,psi2:0.2	C1_1,C2_1	C1_10,C2_4	Yes
ENSG00000101166	SLMO2	chr20:57611785-57613551	-	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,90,31	57611815,57612246,57612335,57613521	No	No	No	bcc_343|Cycle_0|Type_1	30,31	57611815,57613521	psi1:0.925,psi2:0.822222222222	C1_37,C2_37	C1_3,C2_8	Yes
ENSG00000167272	POP5	chr12:121017370-121018948	-	ES	150	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,150,31	121017400,121017577,121017726,121018918	No	No	No	bcc_67533|Cycle_0|Type_1	30,31	121017400,121018918	psi1:1.0,psi2:0.927272727273	C1_24,C2_51	C1_0,C2_4	Yes
ENSG00000158985	CDC42SE2	chr5:130726770-130727641	+	altA	89	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):130726801,130727611	31,120	130726801,130727522	No	Yes	No	bcc_16724|Cycle_0|Type_1	31,31	130726801,130727611	psi1:0.875,psi2:1.0	C1_35,C2_8	C1_5,C2_0	Yes
ENSG00000005483	KMT2E	chr7:104750784-104751247	+	ES	126	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,126,30	104750815,104750924,104751049,104751218	No	Yes	No	bcc_2285|Cycle_0|Type_1	31,30	104750815,104751218	psi1:0.848484848485,psi2:1.0	C1_28,C2_5	C1_5,C2_0	Yes
ENSG00000140365	COMMD4	chr15:75630995-75631407	+	altA	52	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,82	75631026,75631326	No	No	No	bcc_68914|Cycle_0|Type_1	31,30	75631026,75631378	psi1:1.0,psi2:0.94	C1_29,C2_47	C1_0,C2_3	Yes
ENSG00000186522	SEPT10	chr2:110303785-110323370	-	ES_MULTI	302	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,133,169,31	110303814,110310664,110310796,110321943,110322111,110323340	No	No	No	bcc_36248|Cycle_0|Type_1	29,31	110303814,110323340	psi1:0.953846153846,psi2:1.0	C1_62,C2_61	C1_3,C2_0	(AC:110323340,CT:110303814);(AC:110321943,CT:110310796);(AC:110323340,CT:110322111);(GC:110310664,CT:110303814)
ENSG00000173744	AGFG1	chr2:228416804-228418455	+	altA	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,36	228416833,228418420	No	No	No	bcc_40316|Cycle_0|Type_1	29,30	228416833,228418426	psi1:0.545454545455,psi2:0.703703703704	C1_6,C2_19	C1_5,C2_8	Yes
ENSG00000148660	CAMK2G	chr10:75585075-75597256	-	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,33,31	75585105,75587847,75587879,75597226	No	Yes	No	bcc_56145|Cycle_0|Type_1	30,31	75585105,75597226	psi1:0.457142857143,psi2:0	C1_16,C2_0	C1_19,C2_1	Yes
ENSG00000132305	IMMT	chr2:86398383-86400802	-	altA	24	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):86398435,86400773	52,30	86398435,86400773	No	Yes	No	bcc_50911|Cycle_1|Type_1	28,30	86398411,86400773	psi1:0.942857142857,psi2:1.0	C1_33,C2_22	C1_2,C2_0	Yes
ENSG00000160818	GPATCH4	chr1:156566241-156568049	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,87,31	156566270,156567827,156567913,156568019	No	No	No	bcc_16282|Cycle_1|Type_1	29,31	156566270,156568019	psi1:0.842105263158,psi2:0.935483870968	C1_16,C2_29	C1_3,C2_2	Yes
ENSG00000168610	STAT3	chr17:40500507-40540327	-	altA	22	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	50,31	40500557,40540297	No	Yes	No	bcc_8718|Cycle_1|Type_1	28,31	40500535,40540297	psi1:0.75,psi2:0.576923076923	C1_6,C2_15	C1_2,C2_11	Yes
ENSG00000176261	ZBTB8OS	chr1:33093116-33099275	-	ES	53	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,53,30	33093145,33097428,33097480,33099246	No	Yes	No	bcc_8003|Cycle_1|Type_1	29,30	33093145,33099246	psi1:0.913043478261,psi2:0.783333333333	C1_21,C2_47	C1_2,C2_13	Yes
ENSG00000187109	NAP1L1	chr12:76441467-76442202	-	ES_altAD	672	No	-	protein_coding	2_ss_annotated_(over_6_ss):76441498,76442173	269,118,346	76441736,76441738,76441855,76441857	No	Yes	No	bcc_14511|Cycle_57|Type_1	31,30	76441498,76442173	psi1:0.927113702624,psi2:0.806451612903	C1_318,C2_50	C1_25,C2_12	(AC:76442173,CT:76441498);-;-
ENSG00000081181	ARG2	chr14:68113712-68114794	-	IR	1021	Yes	Yes	protein_coding	no_known_ss	1082	-	No	Yes	No	bcc_19775|Cycle_1|Type_1	30,31	68113742,68114764	psi1:0.953488372093,psi2:1.0	C1_164,C2_156	C1_8,C2_0	(AG:68114764,GT:68113742)
ENSG00000148803	FUOM	chr10:135168910-135169272	-	altA	69	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	99,31	135169009,135169242	No	No	No	bcc_57094|Cycle_0|Type_1	30,31	135168940,135169242	psi1:1.0,psi2:0.388059701493	C1_1,C2_26	C1_0,C2_41	Yes
ENSG00000112715	VEGFA	chr6:43746624-43749723	+	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,72,31	43746655,43748469,43748540,43749693	No	Yes	No	bcc_39955|Cycle_2|Type_1	31,31	43746655,43749693	psi1:0.4,psi2:0.6	C1_4,C2_30	C1_6,C2_20	Yes
ENSG00000143612	C1orf43	chr1:154187020-154192847	-	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,102,30	154187050,154192312,154192413,154192818	No	No	No	bcc_49728|Cycle_0|Type_1	30,30	154187050,154192818	psi1:0.699248120301,psi2:0.826666666667	C1_93,C2_124	C1_40,C2_26	Yes
ENSG00000182327	GLTPD2	chr17:4692382-4692549	-	IR	108	No	Yes	protein_coding	no_known_ss	167	-	No	No	No	bcc_63994|Cycle_0|Type_1	30,29	4692412,4692521	psi1:1.0,psi2:0.526315789474	C1_1,C2_20	C1_0,C2_18	(AG:4692521,GT:4692412)
ENSG00000118200	CAMSAP2	chr1:200813966-200816414	+	altA	48	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,77	200813997,200816338	No	No	No	bcc_40470|Cycle_0|Type_1	31,29	200813997,200816386	psi1:0.684210526316,psi2:1.0	C1_13,C2_1	C1_6,C2_0	Yes
ENSG00000123836	PFKFB2	chr1:207243723-207244883	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,30	207243754,207244533,207244595,207244854	No	No	No	bcc_58706|Cycle_0|Type_1	31,30	207243754,207244854	psi1:0.85,psi2:1.0	C1_17,C2_3	C1_3,C2_0	Yes
ENSG00000166333	ILK	chr11:6625021-6625485	+	altA	46	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,76	6625052,6625410	No	No	No	bcc_26208|Cycle_0|Type_1	31,30	6625052,6625456	psi1:0.75,psi2:0.6	C1_9,C2_3	C1_3,C2_2	Yes
ENSG00000257379,ENSG00000197111	RP11-793H13.8,PCBP2	chr12:53854896-53856305	+	altA	12	No	Yes	processed_transcript,protein_coding	all_splice_sites_known_(3_ss)	31,41	53854927,53856265	No	No	No	bcc_11407|Cycle_0|Type_1	31,29	53854927,53856277	psi1:0.354545454545,psi2:0.503816793893	C1_39,C2_66	C1_71,C2_65	(GT:53854927,AG:53856277);(GT:53854927,TG:53856265)
ENSG00000137776	SLTM	chr15:59191022-59204764	-	ES	412	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,412,28,3	59191051,59191668,59192079,59193459,59193486,59204762	No	Yes	No	bcc_45443|Cycle_1|Type_1	29,28,3	59191051,59193459,59193486,59204762	psi1:0.955223880597,psi2:0.869565217391	C1_64,C2_20	C1_3,C2_3	Yes
ENSG00000165650	PDZD8	chr10:119078457-119133894	-	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,123,28	119078485,119100491,119100613,119133867	No	No	No	bcc_17021|Cycle_0|Type_1	28,28	119078485,119133867	psi1:0.931034482759,psi2:1.0	C1_27,C2_13	C1_2,C2_0	Yes
ENSG00000136450	SRSF1	chr17:56082373-56083192	-	altA	559	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	588,31	56082961,56083162	No	Yes	No	bcc_5527|Cycle_0|Type_1	29,31	56082402,56083162	psi1:0.96015936255,psi2:1.0	C1_241,C2_309	C1_10,C2_0	Yes
ENSG00000178922	HYI	chr1:43916951-43917128	-	altD	18	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,48	43916982,43917081	No	No	No	bcc_56024|Cycle_0|Type_1	31,30	43916982,43917099	psi1:0.6,psi2:0.387096774194	C1_3,C2_12	C1_2,C2_19	Yes
ENSG00000183624	HMCES	chr3:128998727-129017221	+	ES_MULTI	270	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,144,126,25	128998758,129007697,129007840,129009522,129009647,129017197	No	No	No	bcc_44964|Cycle_0|Type_1	31,25	128998758,129017197	psi1:0.944444444444,psi2:1.0	C1_85,C2_57	C1_5,C2_0	Yes
ENSG00000070610	GBA2	chr9:35738343-35738553	-	IR	151	Yes	Yes	protein_coding	no_known_ss	210	-	No	No	No	bcc_53798|Cycle_0|Type_1	28,31	35738371,35738523	psi1:0.375,psi2:0.533333333333	C1_12,C2_8	C1_20,C2_7	Yes
ENSG00000176731	C8orf59	chr8:86129700-86131582	-	altD	87	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,118	86129731,86131465	No	Yes	No	bcc_29449|Cycle_2|Type_1	31,31	86129731,86131552	psi1:0.933333333333,psi2:0.796296296296	C1_14,C2_43	C1_1,C2_11	Yes
ENSG00000117408	IPO13	chr1:44422956-44423101	+	IR	86	Yes	Yes	protein_coding	no_known_ss	145	-	No	No	No	bcc_62754|Cycle_0|Type_1	31,28	44422987,44423074	psi1:0.2,psi2:0	C1_6,C2_0	C1_24,C2_3	Yes
ENSG00000148396	SEC16A	chr9:139338323-139340127	-	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,60,31	139338352,139339504,139339563,139340097	No	No	No	bcc_56499|Cycle_0|Type_1	29,31	139338352,139340097	psi1:0.666666666667,psi2:0.851851851852	C1_2,C2_23	C1_1,C2_4	Yes
ENSG00000137776	SLTM	chr15:59191022-59204764	-	ES	415	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,415,28,3	59191051,59191668,59192082,59193459,59193486,59204762	No	Yes	No	bcc_45443|Cycle_3|Type_1	29,28,3	59191051,59193459,59193486,59204762	psi1:0.958333333333,psi2:0.875	C1_69,C2_21	C1_3,C2_3	Yes
ENSG00000055070	SZRD1	chr1:16693772-16719752	+	ES	50	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,50,30	16693803,16717870,16717919,16719723	No	Yes	No	bcc_35632|Cycle_6|Type_1	31,30	16693803,16719723	psi1:0.7,psi2:0.833333333333	C1_14,C2_10	C1_6,C2_2	Yes
ENSG00000160633	SAFB	chr19:5657327-5661560	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	5657358,5661529	No	Yes	No	bcc_14988|Cycle_0|Type_1	31,29	5657358,5661532	psi1:0.416666666667,psi2:0.25	C1_5,C2_1	C1_7,C2_3	Yes
ENSG00000175193	PARL	chr3:183558397-183562049	-	ES	150	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,150,31	183558428,183560086,183560235,183562019	No	Yes	Yes	bcc_13708|Cycle_7|Type_1	31,31	183558428,183562019	psi1:1.0,psi2:0.90625	C1_18,C2_58	C1_0,C2_6	Yes
ENSG00000129657	SEC14L1	chr17:75212340-75212506	-	altAD	39	No	-	protein_coding	no_known_ss	38,63	75212378,75212444	Yes	Yes	No	bcc_33961|Cycle_567|Type_1	25,37	75212365,75212470	psi1:0.269315673289,psi2:0.0833333333333	C1_122,C2_6	C1_331,C2_66	(AG:75212470,GT:75212365);(AG:75212444,GT:75212378)
ENSG00000092020	PPP2R3C	chr14:35579804-35591138	-	ES	128	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,128,31	35579835,35585816,35585943,35591108	No	No	No	bcc_37292|Cycle_0|Type_1	31,31	35579835,35591108	psi1:0.702702702703,psi2:0.875	C1_26,C2_7	C1_11,C2_1	Yes
ENSG00000165209	STRBP	chr9:125898765-125909161	-	ES	159	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,159,28	125898794,125901808,125901966,125909134	No	No	No	bcc_13641|Cycle_0|Type_1	29,28	125898794,125909134	psi1:0.979591836735,psi2:0.916666666667	C1_48,C2_22	C1_1,C2_2	Yes
ENSG00000134779	TPGS2	chr18:34380244-34387840	-	ES	129	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,129,31	34380274,34385337,34385465,34387810	No	No	No	bcc_59390|Cycle_0|Type_1	30,31	34380274,34387810	psi1:0.926174496644,psi2:1.0	C1_138,C2_59	C1_11,C2_0	Yes
ENSG00000037474	NSUN2	chr5:6620382-6623356	-	ES	85	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,85,30	6620411,6622129,6622213,6623327	No	No	No	bcc_42588|Cycle_0|Type_1	29,30	6620411,6623327	psi1:0.833333333333,psi2:0.942857142857	C1_5,C2_33	C1_1,C2_2	Yes
ENSG00000198730	CTR9	chr11:10800585-10800745	+	IR	98	Yes	Yes	protein_coding	no_known_ss	160	-	No	No	No	bcc_5255|Cycle_0|Type_1	31,31	10800616,10800715	psi1:1.0,psi2:0.943396226415	C1_32,C2_50	C1_0,C2_3	(AG:10800616,GA:10800715)
ENSG00000146063	TRIM41	chr5:180661964-180662382	+	IR	358	Yes	Yes	protein_coding	no_known_ss	418	-	No	Yes	No	bcc_52637|Cycle_0|Type_1	31,29	180661995,180662354	psi1:0.915492957746,psi2:0.8125	C1_65,C2_26	C1_6,C2_6	Yes
ENSG00000137776	SLTM	chr15:59192053-59193486	-	altA	54	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	83,28	59192136,59193459	No	Yes	No	bcc_45443|Cycle_7|Type_1	29,28	59192082,59193459	psi1:0.833333333333,psi2:0.666666666667	C1_15,C2_2	C1_3,C2_1	Yes
ENSG00000133048	CHI3L1	chr1:203148976-203149628	+	IR	592	Yes	Yes	protein_coding	no_known_ss	652	-	No	No	No	bcc_43920|Cycle_0|Type_1	29,31	203149005,203149598	psi1:0.666666666667,psi2:0.29643296433	C1_20,C2_241	C1_10,C2_572	(CT:203149005,AC:203149598)
ENSG00000138668	HNRNPD	chr4:83280762-83294629	-	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,57,31	83280792,83292681,83292737,83294599	No	No	No	bcc_44262|Cycle_0|Type_1	30,31	83280792,83294599	psi1:0.729411764706,psi2:0.875	C1_124,C2_49	C1_46,C2_7	Yes
ENSG00000136861	CDK5RAP2	chr9:123184989-123201707	-	ES	233	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,233,31	123185019,123199573,123199805,123201677	No	No	No	bcc_53000|Cycle_0|Type_1	30,31	123185019,123201677	psi1:0.945945945946,psi2:1.0	C1_35,C2_24	C1_2,C2_0	Yes
ENSG00000172590	MRPL52	chr14:23302660-23303411	+	altD	7	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	38,31	23302698,23303381	No	Yes	No	bcc_66011|Cycle_1|Type_1	31,31	23302691,23303381	psi1:0.1,psi2:0.027027027027	C1_2,C2_2	C1_18,C2_72	Yes
ENSG00000165264	NDUFB6	chr9:32553913-32570987	-	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,45,30	32553942,32558908,32558952,32570958	No	No	No	bcc_17741|Cycle_0|Type_1	29,30	32553942,32570958	psi1:0.917431192661,psi2:0.979695431472	C1_100,C2_193	C1_9,C2_4	Yes
ENSG00000036257	CUL3	chr2:225400328-225449691	-	ES_MULTI	197	Yes	Yes	protein_coding	4_ss_annotated_(over_6_ss):225400358,225422376,225422573,225449661	30,106,91,31	225400358,225422376,225422481,225422483,225422573,225449661	No	Yes	No	bcc_50374|Cycle_2|Type_1	30,31	225400358,225449661	psi1:0.975609756098,psi2:0.904761904762	C1_80,C2_19	C1_2,C2_2	(AC:225422376,CT:225400358);(AC:225449661,CT:225400358);-;(AC:225449661,CT:225422573)
ENSG00000131051	RBM39	chr20:34297149-34300970	-	altA	18	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	47,30	34297196,34300941	No	No	No	bcc_15913|Cycle_0|Type_1	29,30	34297178,34300941	psi1:0.74358974359,psi2:0.604651162791	C1_29,C2_26	C1_10,C2_17	Yes
ENSG00000141905	NFIC	chr19:3452633-3462779	+	ES	86	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,86,30	3452664,3456548,3456633,3462750	No	No	No	bcc_35202|Cycle_1|Type_1	31,30	3452664,3462750	psi1:0.75,psi2:0.869565217391	C1_15,C2_40	C1_5,C2_6	Yes
ENSG00000135506	OS9	chr12:58112934-58114216	+	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,165,28	58112965,58113882,58114046,58114189	No	No	No	bcc_45813|Cycle_0|Type_1	31,28	58112965,58114189	psi1:0.673267326733,psi2:0.833928571429	C1_68,C2_467	C1_33,C2_93	Yes
ENSG00000047849	MAP4	chr3:47898971-47912332	-	ES_MULTI	207	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,93,114,30	47899002,47908736,47908828,47910704,47910817,47912303	No	Yes	No	bcc_6458|Cycle_1|Type_1	31,30	47899002,47912303	psi1:0.927083333333,psi2:1.0	C1_178,C2_75	C1_14,C2_0	Yes
ENSG00000137776	SLTM	chr15:59191022-59204764	-	ES	469	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,469,28,3	59191051,59191668,59192136,59193459,59193486,59204762	No	Yes	No	bcc_45443|Cycle_2|Type_1	29,28,3	59191051,59193459,59193486,59204762	psi1:0.960526315789,psi2:0.88	C1_73,C2_22	C1_3,C2_3	Yes
ENSG00000136371	MTHFS	chr15:80181666-80189241	-	altD	81	No	-	protein_coding	all_splice_sites_known_(3_ss)	30,109	80181696,80189133	No	No	No	bcc_55773|Cycle_2|Type_1	30,28	80181696,80189214	psi1:0.75,psi2:0.35652173913	C1_3,C2_41	C1_1,C2_74	Yes
ENSG00000141452	C18orf8	chr18:21084380-21095848	+	ES_MULTI	229	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,85,57,87,29	21084411,21086934,21087018,21087949,21088005,21089157,21089243,21095820	No	No	No	bcc_18278|Cycle_7|Type_1	31,29	21084411,21095820	psi1:0.938775510204,psi2:1.0	C1_46,C2_25	C1_3,C2_0	Yes
ENSG00000142186	SCYL1	chr11:65303775-65304218	+	altA	132	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):65304057,65303805	30,162	65303805,65304057	No	No	No	bcc_56515|Cycle_1|Type_1	30,30	65303805,65304189	psi1:1.0,psi2:0.933333333333	C1_20,C2_42	C1_0,C2_3	Yes
ENSG00000131236	CAP1	chr1:40506424-40525037	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,32	40506455,40525006	No	Yes	No	bcc_22511|Cycle_11|Type_1	31,29	40506455,40525009	psi1:0.315789473684,psi2:0.5	C1_6,C2_2	C1_13,C2_2	Yes
ENSG00000182628	SKA2	chr17:57189676-57232522	-	ES	177	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,177,31	57189706,57196680,57196856,57232492	No	Yes	No	bcc_27646|Cycle_4|Type_1	30,31	57189706,57232492	psi1:0.846153846154,psi2:0.952380952381	C1_44,C2_20	C1_8,C2_1	Yes
ENSG00000145975	FAM217A	chr6:4061351-4061917	+	IR	507	No	-	protein_coding	no_known_ss	566	-	No	Yes	No	bcc_45334|Cycle_3|Type_1	30,29	4061381,4061889	psi1:0.988505747126,psi2:0.931034482759	C1_86,C2_81	C1_1,C2_6	Yes
ENSG00000127603	MACF1	chr1:39838237-39844903	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,29	39838268,39844133,39844195,39844875	No	No	No	bcc_16555|Cycle_0|Type_1	31,29	39838268,39844875	psi1:0.864864864865,psi2:1.0	C1_32,C2_6	C1_5,C2_0	Yes
ENSG00000221914	PPP2R2A	chr8:26151225-26196437	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):26151256,26196406	31,32	26151256,26196406	No	No	No	bcc_30317|Cycle_0|Type_1	31,29	26151256,26196409	psi1:0.796296296296,psi2:1.0	C1_43,C2_5	C1_11,C2_0	Yes
ENSG00000130723	PRRC2B	chr9:134367618-134371153	+	ES	82	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,82,27	134367647,134369792,134369873,134371127	No	No	No	bcc_19644|Cycle_0|Type_1	29,27	134367647,134371127	psi1:0.814814814815,psi2:0.6875	C1_22,C2_11	C1_5,C2_5	Yes
ENSG00000067113	PPAP2A	chr5:54763947-54786818	-	ES	152	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,152,31	54763977,54771127,54771278,54786788	No	No	No	bcc_21720|Cycle_6|Type_1	30,31	54763977,54786788	psi1:0.897058823529,psi2:0.968085106383	C1_61,C2_91	C1_7,C2_3	Yes
ENSG00000013561	RNF14	chr5:141353277-141359717	+	ES_MULTI	680	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,152,528,30	141353307,141354369,141354520,141357868,141358395,141359688	No	Yes	No	bcc_50866|Cycle_23|Type_1	30,30	141353307,141359688	psi1:0.966292134831,psi2:1.0	C1_86,C2_146	C1_3,C2_0	Yes
ENSG00000122545	SEPT7	chr7:35840849-35872435	+	ES	3	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):35840880,35872408,35840882,35871102	31,5,28	35840880,35871102,35871106,35872408	No	Yes	No	bcc_5294|Cycle_0|Type_1	33,28	35840882,35872408	psi1:0.565217391304,psi2:1.0	C1_78,C2_4	C1_60,C2_0	(GT:35840880,AG:35871102);(GT:35871106,AG:35872408);(GA:35840882,AG:35872408)
ENSG00000168036	CTNNB1	chr3:41241083-41265540	+	altD	48	No	-	protein_coding	2_ss_annotated_(over_3_ss):41265512,41241161	78,29	41241161,41265512	No	No	No	bcc_6774|Cycle_1|Type_1	30,29	41241113,41265512	psi1:0.925925925926,psi2:1.0	C1_25,C2_10	C1_2,C2_0	Yes
ENSG00000038382	TRIO	chr5:14477043-14480058	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,90,31	14477072,14479370,14479459,14480028	No	No	No	bcc_39234|Cycle_0|Type_1	29,31	14477072,14480028	psi1:0.925925925926,psi2:1.0	C1_25,C2_10	C1_2,C2_0	Yes
ENSG00000131236	CAP1	chr1:40506424-40525033	+	altD	18	No	-	protein_coding	all_splice_sites_known_(3_ss)	49,28	40506473,40525006	No	Yes	No	bcc_22511|Cycle_0|Type_1	31,28	40506455,40525006	psi1:0.722222222222,psi2:0.5	C1_13,C2_1	C1_5,C2_1	Yes
ENSG00000116750	UCHL5	chr1:192985495-192990257	-	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,75,31	192985525,192989437,192989511,192990227	No	No	No	bcc_11048|Cycle_0|Type_1	30,31	192985525,192990227	psi1:0.0714285714286,psi2:0.166666666667	C1_3,C2_3	C1_39,C2_15	Yes
ENSG00000087884	AAMDC	chr11:77532256-77553554	+	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,42,30	77532287,77552065,77552106,77553525	No	No	No	bcc_9596|Cycle_0|Type_1	31,30	77532287,77553525	psi1:0.625,psi2:0.764705882353	C1_5,C2_13	C1_3,C2_4	Yes
ENSG00000134644	PUM1	chr1:31439015-31440044	-	altA	81	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	110,31	31439125,31440014	No	No	No	bcc_1269|Cycle_0|Type_1	29,31	31439044,31440014	psi1:0.75,psi2:0.875	C1_12,C2_7	C1_4,C2_1	Yes
ENSG00000139620	KANSL2	chr12:49065714-49073467	-	ES	115	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,115,30	49065745,49072819,49072933,49073438	No	No	No	bcc_55345|Cycle_0|Type_1	31,30	49065745,49073438	psi1:0.692307692308,psi2:0.818181818182	C1_9,C2_9	C1_4,C2_2	Yes
ENSG00000165914	TTC7B	chr14:91059939-91077114	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,51,29	91059970,91069597,91069647,91077086	No	No	No	bcc_37515|Cycle_0|Type_1	31,29	91059970,91077086	psi1:0.230769230769,psi2:0	C1_6,C2_0	C1_20,C2_2	Yes
ENSG00000176261	ZBTB8OS	chr1:33093114-33116061	-	ES_MULTI	287	Yes	-	protein_coding	all_splice_sites_known_(11_ss)	31,53,83,122,25,32	33093145,33097428,33097480,33099246,33099328,33099552,33099673,33100369,33100393,33116030	No	Yes	No	bcc_8003|Cycle_19|Type_1	31,28	33093145,33116034	psi1:1.0,psi2:0.949367088608	C1_53,C2_75	C1_0,C2_4	Yes
ENSG00000178802	MPI	chr15:75188635-75189879	+	ES	209	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,209,27	75188666,75189352,75189560,75189853	No	No	No	bcc_13986|Cycle_0|Type_1	31,27	75188666,75189853	psi1:0.914285714286,psi2:0.977777777778	C1_32,C2_44	C1_3,C2_1	Yes
ENSG00000187109	NAP1L1	chr12:76441467-76442202	-	altAD	673	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):76441498,76442173	388,346	76441855,76441857	No	Yes	No	bcc_14511|Cycle_22|Type_1	31,30	76441498,76442173	psi1:0.928571428571,psi2:0.815384615385	C1_325,C2_53	C1_25,C2_12	(AC:76442173,CT:76441498);-
ENSG00000167244,ENSG00000129965	IGF2,INS-IGF2	chr11:2154864-2156626	-	altA	9	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	40,30	2154904,2156597	No	No	No	bcc_2711|Cycle_0|Type_1	31,30	2154895,2156597	psi1:0,psi2:0.25	C1_0,C2_11	C1_3,C2_33	(AC:2156597,CT:2154895);(AC:2156597,CC:2154904)
ENSG00000166922	SCG5	chr15:32972085-32976788	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	32972116,32976758	No	No	No	bcc_45257|Cycle_0|Type_1	31,28	32972116,32976761	psi1:0.296089385475,psi2:0.75	C1_53,C2_3	C1_126,C2_1	Yes
ENSG00000116885	OSCP1	chr1:36884624-36887781	-	ES	140	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,140,31	36884655,36886077,36886216,36887751	No	No	No	bcc_67771|Cycle_1|Type_1	31,31	36884655,36887751	psi1:0.884615384615,psi2:1.0	C1_23,C2_5	C1_3,C2_0	Yes
ENSG00000125952	MAX	chr14:65560502-65569051	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,30	65560533,65568264,65568290,65569022	No	No	No	bcc_37388|Cycle_0|Type_1	31,30	65560533,65569022	psi1:0.5,psi2:0.333333333333	C1_14,C2_3	C1_14,C2_6	Yes
ENSG00000198612	COPS8	chr2:237994655-237995800	+	ES	65	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,65,31	237994685,237995375,237995439,237995770	No	No	No	bcc_56994|Cycle_0|Type_1	30,31	237994685,237995770	psi1:0.21875,psi2:0.0714285714286	C1_14,C2_1	C1_50,C2_13	Yes
ENSG00000175324	LSM1	chr8:38021327-38029513	-	ES	116	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,116,31	38021358,38027320,38027435,38029483	No	Yes	No	bcc_35060|Cycle_0|Type_1	31,31	38021358,38029483	psi1:0.827586206897,psi2:0.921875	C1_48,C2_59	C1_10,C2_5	Yes
ENSG00000131876	SNRPA1	chr15:101825975-101827143	-	ES	80	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,80,31	101826006,101826419,101826498,101827113	No	No	No	bcc_58601|Cycle_0|Type_1	31,31	101826006,101827113	psi1:0.633333333333,psi2:0.765957446809	C1_19,C2_36	C1_11,C2_11	Yes
ENSG00000117448	AKR1A1	chr1:46016797-46027488	+	ES	128	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,128,28	46016827,46018108,46018235,46027461	No	No	No	bcc_59708|Cycle_0|Type_1	30,28	46016827,46027461	psi1:0.315789473684,psi2:0.514285714286	C1_6,C2_54	C1_13,C2_51	Yes
ENSG00000113645	WWC1	chr5:167891936-167894877	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	167891967,167894845	No	No	No	bcc_39883|Cycle_1|Type_1	31,30	167891967,167894848	psi1:0.533333333333,psi2:0.714285714286	C1_16,C2_5	C1_14,C2_2	Yes
ENSG00000132763	MMACHC	chr1:45966054-45973084	+	altA	31	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):45973028,45966085	31,57	45966085,45973028	No	No	No	bcc_77316|Cycle_1|Type_1	31,26	45966085,45973059	psi1:1.0,psi2:0.857142857143	C1_2,C2_12	C1_0,C2_2	Yes
ENSG00000185633	NDUFA4L2	chr12:57629562-57630406	-	altD	6	No	-	protein_coding	2_ss_annotated_(over_3_ss):57629592,57630376	30,37	57629592,57630370	No	No	No	bcc_72960|Cycle_0|Type_1	30,31	57629592,57630376	psi1:0.142857142857,psi2:0	C1_2,C2_0	C1_12,C2_2	(GC:57630370,CT:57629592);(AC:57630376,CT:57629592)
ENSG00000133030	MPRIP	chr17:17077359-17079768	+	ES	120	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,120,29	17077389,17078607,17078726,17079740	No	No	No	bcc_36162|Cycle_0|Type_1	30,29	17077389,17079740	psi1:0.914285714286,psi2:1.0	C1_32,C2_10	C1_3,C2_0	Yes
ENSG00000121073	SLC35B1	chr17:47783640-47784357	-	altA	25	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	56,31	47783696,47784327	No	No	No	bcc_47267|Cycle_2|Type_1	31,31	47783671,47784327	psi1:0.65,psi2:0.8125	C1_13,C2_91	C1_7,C2_21	Yes
ENSG00000077097	TOP2B	chr3:25673980-25674214	-	altA	63	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):25674184,25674074	94,31	25674074,25674184	No	No	No	bcc_15262|Cycle_0|Type_1	31,31	25674011,25674184	psi1:0.951612903226,psi2:0.869565217391	C1_59,C2_20	C1_3,C2_3	Yes
ENSG00000196405	EVL	chr14:100603950-100607545	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,29	100603981,100604077,100604139,100607517	No	No	No	bcc_39936|Cycle_0|Type_1	31,29	100603981,100607517	psi1:0.927835051546,psi2:1.0	C1_90,C2_35	C1_7,C2_0	Yes
ENSG00000084072	PPIE	chr1:40209565-40214603	+	ES	124	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,124,29	40209596,40211047,40211170,40214575	No	Yes	No	bcc_17553|Cycle_0|Type_1	31,29	40209596,40214575	psi1:0.942857142857,psi2:1.0	C1_33,C2_18	C1_2,C2_0	Yes
ENSG00000145901	TNIP1	chr5:150410206-150411876	-	altA	74	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	102,29	150410308,150411848	No	No	No	bcc_53486|Cycle_0|Type_1	28,29	150410234,150411848	psi1:1.0,psi2:0.905660377358	C1_13,C2_48	C1_0,C2_5	Yes
ENSG00000187109	NAP1L1	chr12:76441467-76442202	-	altAD	673	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):76441498,76442173	269,465	76441736,76441738	No	Yes	No	bcc_14511|Cycle_26|Type_1	31,30	76441498,76442173	psi1:0.928571428571,psi2:0.818181818182	C1_325,C2_54	C1_25,C2_12	(AC:76442173,CT:76441498);-
ENSG00000188706	ZDHHC9	chrX:128947670-128957684	-	ES	138	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,138,30	128947701,128948634,128948771,128957655	No	No	No	bcc_4548|Cycle_0|Type_1	31,30	128947701,128957655	psi1:1.0,psi2:0.967213114754	C1_93,C2_59	C1_0,C2_2	Yes
ENSG00000100722	ZC3H14	chr14:89042253-89063106	+	ES	156	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,156,29	89042284,89044329,89044484,89063078	No	Yes	No	bcc_24966|Cycle_0|Type_1	31,29	89042284,89063078	psi1:1.0,psi2:0.933333333333	C1_24,C2_56	C1_0,C2_4	Yes
ENSG00000100991	TRPC4AP	chr20:33590414-33590940	-	IR	465	No	-	protein_coding	no_known_ss	526	-	No	No	No	bcc_50106|Cycle_1|Type_1	30,31	33590444,33590910	psi1:0.970149253731,psi2:1.0	C1_65,C2_131	C1_2,C2_0	Yes
ENSG00000099968	BCL2L13	chr22:18171877-18185039	+	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,70,31	18171908,18178907,18178976,18185009	No	No	No	bcc_47564|Cycle_0|Type_1	31,31	18171908,18185009	psi1:0.851851851852,psi2:0.9375	C1_23,C2_30	C1_4,C2_2	Yes
ENSG00000137074	APTX	chr9:32974530-32985999	-	ES	227	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,227,31	32974559,32984629,32984855,32985969	No	No	No	bcc_54640|Cycle_0|Type_1	29,31	32974559,32985969	psi1:0.955223880597,psi2:1.0	C1_64,C2_51	C1_3,C2_0	Yes
ENSG00000163597	SNHG16	chr17:74553908-74557397	+	ES	99	No	-	processed_transcript	all_splice_sites_known_(4_ss)	31,99,28	74553939,74555027,74555125,74557370	No	No	No	bcc_28106|Cycle_2|Type_1	31,28	74553939,74557370	psi1:0.555555555556,psi2:0.718309859155	C1_10,C2_51	C1_8,C2_20	Yes
ENSG00000137414	FAM8A1	chr6:17605229-17608456	+	ES	140	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,140,31	17605260,17606105,17606244,17608426	No	No	No	bcc_35030|Cycle_0|Type_1	31,31	17605260,17608426	psi1:1.0,psi2:0.957746478873	C1_60,C2_68	C1_0,C2_3	Yes
ENSG00000165795	NDRG2	chr14:21490627-21491430	-	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,42,31	21490656,21491023,21491064,21491400	No	No	No	bcc_46698|Cycle_0|Type_1	29,31	21490656,21491400	psi1:0.593406593407,psi2:0.760330578512	C1_270,C2_92	C1_185,C2_29	Yes
ENSG00000198960	ARMCX6	chrX:100870429-100871692	-	altA	293	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):100871662,100870750	321,31	100870750,100871662	No	No	No	bcc_62957|Cycle_0|Type_1	28,31	100870457,100871662	psi1:0.939393939394,psi2:1.0	C1_31,C2_15	C1_2,C2_0	Yes
ENSG00000101843	PSMD10	chrX:107328326-107331025	-	altD	79	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,110	107328357,107330916	No	No	No	bcc_37636|Cycle_0|Type_1	31,31	107328357,107330995	psi1:0.923076923077,psi2:1.0	C1_96,C2_33	C1_8,C2_0	Yes
ENSG00000099330	OCEL1	chr19:17339087-17339847	+	altA	206	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,236	17339118,17339612	No	No	No	bcc_60994|Cycle_0|Type_1	31,30	17339118,17339818	psi1:0.766666666667,psi2:0.878378378378	C1_23,C2_65	C1_7,C2_9	Yes
ENSG00000013374	NUB1	chr7:151053008-151053245	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):151053036,151053214	28,32	151053036,151053214	No	No	No	bcc_24203|Cycle_0|Type_1	28,29	151053036,151053217	psi1:0.948717948718,psi2:1.0	C1_37,C2_23	C1_2,C2_0	Yes
ENSG00000104886	PLEKHJ1	chr19:2234029-2235791	-	ES	91	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,91,31	2234060,2234149,2234239,2235761	No	No	No	bcc_8920|Cycle_0|Type_1	31,31	2234060,2235761	psi1:1.0,psi2:0.941176470588	C1_16,C2_32	C1_0,C2_2	Yes
ENSG00000081692	JMJD4	chr1:227920348-227920656	-	altD	48	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,75	227920377,227920582	No	No	No	bcc_63438|Cycle_0|Type_1	29,27	227920377,227920630	psi1:1.0,psi2:0.833333333333	C1_2,C2_15	C1_0,C2_3	Yes
ENSG00000132965	ALOX5AP	chr13:31318272-31338100	+	ES	140	Yes	Yes	protein_coding	6_ss_annotated_(over_7_ss):31330081,31338081,31326189,31330162,31326259,31318296	24,71,82,20	31318296,31326189,31326259,31330081,31330162,31338081	No	No	No	bcc_55921|Cycle_0|Type_1	24,13,20	31318296,31330150,31330162,31338081	psi1:0.909090909091,psi2:1.0	C1_40,C2_11	C1_4,C2_0	Yes
ENSG00000099901	RANBP1	chr22:20113860-20114506	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	20113891,20114475	No	No	No	bcc_30716|Cycle_0|Type_1	31,29	20113891,20114478	psi1:0.555555555556,psi2:0.692307692308	C1_45,C2_45	C1_36,C2_20	Yes
ENSG00000100650	SRSF5	chr14:70235938-70237212	-	IR	1215	No	Yes	protein_coding	no_known_ss	1274	-	No	Yes	Yes	bcc_37435|Cycle_11|Type_1	30,29	70235968,70237184	psi1:0.489669421488,psi2:0.6375	C1_237,C2_153	C1_247,C2_87	(AG:70237184,GT:70235968)
ENSG00000066468	FGFR2	chr10:123310942-123353253	-	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,78,31	123310973,123324016,123324093,123353223	No	Yes	No	bcc_40054|Cycle_0|Type_1	31,31	123310973,123353223	psi1:0.916666666667,psi2:1.0	C1_33,C2_10	C1_3,C2_0	Yes
ENSG00000198162	MAN1A2	chr1:117963253-117984942	+	IR	48	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):117984853,117963271	18,90	-	No	Yes	No	bcc_23919|Cycle_15|Type_1	18,11,31	117963271,117984853,117984863,117984912	psi1:0.913043478261,psi2:1.0	C1_21,C2_6	C1_2,C2_0	(TA:117984863,CC:117984912);(GT:117963271,AG:117984853)
ENSG00000102081	FMR1	chrX:147024815-147026452	+	altA	36	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,64	147024846,147026389	No	Yes	No	bcc_34664|Cycle_0|Type_1	31,28	147024846,147026425	psi1:0.861111111111,psi2:1.0	C1_31,C2_5	C1_5,C2_0	Yes
ENSG00000187109	NAP1L1	chr12:76441467-76442202	-	ES_altAD	672	No	-	protein_coding	2_ss_annotated_(over_6_ss):76441498,76442173	269,144,320	76441736,76441738,76441881,76441883	No	Yes	No	bcc_14511|Cycle_25|Type_1	31,30	76441498,76442173	psi1:0.928366762178,psi2:0.820895522388	C1_324,C2_55	C1_25,C2_12	-;(AC:76442173,CT:76441498);-
ENSG00000117868	ESYT2	chr7:158557513-158580725	-	ES_MULTI	177	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,121,56,31	158557544,158560345,158560465,158566032,158566087,158580695	No	No	No	bcc_8372|Cycle_0|Type_1	31,31	158557544,158580695	psi1:0.936170212766,psi2:1.0	C1_44,C2_19	C1_3,C2_0	Yes
ENSG00000072110	ACTN1	chr14:69345210-69346709	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,81,31	69345240,69345706,69345786,69346679	No	Yes	No	bcc_18088|Cycle_1|Type_1	30,31	69345240,69346679	psi1:0.764705882353,psi2:0.875	C1_13,C2_35	C1_4,C2_5	Yes
ENSG00000115042	FAHD2A	chr2:96068589-96071328	+	ES	126	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,126,28	96068620,96071025,96071150,96071301	No	No	No	bcc_56834|Cycle_1|Type_1	31,28	96068620,96071301	psi1:0.933333333333,psi2:0.828571428571	C1_14,C2_29	C1_1,C2_6	Yes
ENSG00000163159	VPS72	chr1:151158396-151162636	-	altD	126	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):151162481,151158426	30,156	151158426,151162481	No	No	No	bcc_45980|Cycle_0|Type_1	30,30	151158426,151162607	psi1:0.909090909091,psi2:1.0	C1_30,C2_8	C1_3,C2_0	(GC:151162481,CT:151158426);(AC:151162607,CT:151158426)
ENSG00000101150	TPD52L2	chr20:62505141-62514102	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,60,31	62505169,62507169,62507228,62514072	No	No	No	bcc_24494|Cycle_0|Type_1	28,31	62505169,62514072	psi1:0.727272727273,psi2:0.842105263158	C1_16,C2_16	C1_6,C2_3	Yes
ENSG00000073921	PICALM	chr11:85670074-85685781	-	ES	103	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,103,31	85670103,85671718,85671820,85685751	No	No	No	bcc_13921|Cycle_0|Type_1	29,31	85670103,85685751	psi1:0.12676056338,psi2:0.047619047619	C1_9,C2_3	C1_62,C2_60	Yes
ENSG00000141027	NCOR1	chr17:16029492-16040653	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,29	16029523,16040625	No	No	No	bcc_47119|Cycle_0|Type_1	28,29	16029520,16040625	psi1:0.583333333333,psi2:0.727272727273	C1_14,C2_8	C1_10,C2_3	Yes
ENSG00000122378	FAM213A	chr10:82168368-82180267	+	altA	17	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,46	82168399,82180222	No	No	No	bcc_20354|Cycle_0|Type_1	31,29	82168399,82180239	psi1:0.857142857143,psi2:0.736842105263	C1_48,C2_14	C1_8,C2_5	Yes
ENSG00000198959	TGM2	chr20:36775267-36776403	-	altD	12	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):36775296,36776363	29,41	36775296,36776363	No	No	No	bcc_3953|Cycle_0|Type_1	29,29	36775296,36776375	psi1:1.0,psi2:0.916666666667	C1_13,C2_44	C1_0,C2_4	Yes
ENSG00000070087	PFN2	chr3:149684022-149686175	-	altA	322	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	351,31	149684373,149686145	No	No	No	bcc_36143|Cycle_0|Type_1	29,31	149684051,149686145	psi1:0.922894424674,psi2:0.555555555556	C1_778,C2_5	C1_65,C2_4	Yes
ENSG00000120837	NFYB	chr12:104515068-104517195	-	altD	162	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):104515099,104517004	31,192	104515099,104517004	No	No	No	bcc_45927|Cycle_0|Type_1	31,30	104515099,104517166	psi1:0.983870967742,psi2:0.93023255814	C1_122,C2_40	C1_2,C2_3	Yes
ENSG00000079819	EPB41L2	chr6:131184830-131206265	-	ES_MULTI	537	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	28,99,123,315,30	131184858,131186676,131186774,131188599,131188721,131190952,131191266,131206236	No	Yes	No	bcc_46240|Cycle_13|Type_1	28,30	131184858,131206236	psi1:0.898089171975,psi2:1.0	C1_141,C2_32	C1_16,C2_0	Yes
ENSG00000163539	CLASP2	chr3:33617737-33623343	-	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,63,31	33617767,33618694,33618756,33623313	No	No	No	bcc_23694|Cycle_0|Type_1	30,31	33617767,33623313	psi1:0.489795918367,psi2:0	C1_24,C2_0	C1_25,C2_1	Yes
ENSG00000176261	ZBTB8OS	chr1:33093114-33116064	-	ES_MULTI	283	Yes	Yes	protein_coding	all_splice_sites_known_(10_ss)	31,53,83,122,25,31	33093145,33097428,33097480,33099246,33099328,33099552,33099673,33100369,33100393,33116034	No	Yes	No	bcc_8003|Cycle_5|Type_1	31,31	33093145,33116034	psi1:1.0,psi2:0.954022988506	C1_57,C2_83	C1_0,C2_4	Yes
ENSG00000142396	ERVK3-1	chr19:58826376-58838219	+	ES	87	No	-	processed_transcript	no_known_ss	26,87,31	58826402,58836641,58836727,58838189	No	No	No	bcc_49064|Cycle_0|Type_1	26,31	58826402,58838189	psi1:0.581395348837,psi2:0.8	C1_25,C2_4	C1_18,C2_1	(CT:58826402,AC:58836641);(CT:58836727,AC:58838189);(CT:58826402,AC:58838189)
ENSG00000147586,ENSG00000076554	MRPS28,TPD52	chr8:80915385-80942318	-	altD	33	No	Yes	protein_coding,protein_coding	2_ss_annotated_(over_3_ss):80942289,80915415	30,63	80915415,80942256	No	Yes	No	bcc_42573|Cycle_1|Type_1	30,30	80915415,80942289	psi1:0.416666666667,psi2:0.285714285714	C1_10,C2_6	C1_14,C2_15	Yes
ENSG00000092199	HNRNPC	chr14:21698495-21699186	-	altD	39	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,70	21698525,21699117	No	No	No	bcc_9564|Cycle_0|Type_1	30,31	21698525,21699156	psi1:0.279279279279,psi2:0.15625	C1_124,C2_35	C1_320,C2_189	Yes
ENSG00000100201	DDX17	chr22:38882416-38883912	-	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,35	38882445,38883878	No	No	No	bcc_19974|Cycle_0|Type_1	29,29	38882445,38883884	psi1:0.5,psi2:0.363636363636	C1_4,C2_4	C1_4,C2_7	Yes
ENSG00000124615	MOCS1	chr6:39874862-39876861	-	altD	15	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,46	39874893,39876816	No	No	No	bcc_61676|Cycle_0|Type_1	31,31	39874893,39876831	psi1:1.0,psi2:0.885714285714	C1_6,C2_31	C1_0,C2_4	Yes
ENSG00000143207	RFWD2	chr1:176104192-176132032	-	ES_MULTI	129	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,60,69,28	176104222,176105624,176105683,176118142,176118210,176132005	No	No	No	bcc_43128|Cycle_0|Type_1	30,28	176104222,176132005	psi1:1.0,psi2:0.944444444444	C1_17,C2_34	C1_0,C2_2	Yes
ENSG00000127481	UBR4	chr1:19427036-19430607	-	ES	122	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,122,30	19427067,19428014,19428135,19430578	No	No	No	bcc_59885|Cycle_0|Type_1	31,30	19427067,19430578	psi1:0.941176470588,psi2:1.0	C1_48,C2_22	C1_3,C2_0	Yes
ENSG00000187109	NAP1L1	chr12:76441467-76442202	-	IR	674	Yes	-	protein_coding	no_known_ss	735	-	No	Yes	No	bcc_14511|Cycle_18|Type_1	31,30	76441498,76442173	psi1:0.929971988796,psi2:0.826086956522	C1_332,C2_57	C1_25,C2_12	Yes
ENSG00000132388	UBE2G1	chr17:4186185-4210346	-	ES_MULTI	277	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,179,98,31	4186216,4192525,4192703,4200012,4200109,4210316	No	No	No	bcc_55891|Cycle_0|Type_1	31,31	4186216,4210316	psi1:0.960784313725,psi2:1.0	C1_98,C2_87	C1_4,C2_0	Yes
ENSG00000122490	PQLC1	chr18:77679370-77703359	-	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,54,31	77679400,77693969,77694022,77703329	No	Yes	No	bcc_20391|Cycle_1|Type_1	30,31	77679400,77703329	psi1:0.875,psi2:0.690909090909	C1_7,C2_38	C1_1,C2_17	Yes
ENSG00000075711	DLG1	chr3:196793594-196802738	-	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,42,31	196793625,196796090,196796131,196802708	No	Yes	No	bcc_42915|Cycle_1|Type_1	31,31	196793625,196802708	psi1:0.884615384615,psi2:1.0	C1_69,C2_13	C1_9,C2_0	Yes
ENSG00000137710	RDX	chr11:110128884-110143291	-	ES_MULTI	371	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,275,96,31	110128914,110134685,110134959,110135504,110135599,110143261	No	No	No	bcc_22140|Cycle_0|Type_1	30,31	110128914,110143261	psi1:0.958333333333,psi2:1.0	C1_92,C2_72	C1_4,C2_0	Yes
ENSG00000186591	UBE2H	chr7:129479085-129497378	-	altA	60	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	90,28	129479175,129497351	No	No	No	bcc_31808|Cycle_0|Type_1	30,28	129479115,129497351	psi1:0.92523364486,psi2:1.0	C1_99,C2_32	C1_8,C2_0	Yes
ENSG00000079819	EPB41L2	chr6:131184830-131206265	-	ES_MULTI	786	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	28,99,123,564,30	131184858,131186676,131186774,131188599,131188721,131190703,131191266,131206236	No	Yes	No	bcc_46240|Cycle_14|Type_1	28,30	131184858,131206236	psi1:0.917098445596,psi2:1.0	C1_177,C2_50	C1_16,C2_0	Yes
ENSG00000272369	RP11-446N19.1	chr12:46781725-47046202	+	ES_MULTI	240	No	-	lincRNA	4_ss_annotated_(over_6_ss):46781755,46848795,46848924,47046173	30,130,110,30	46781755,46848795,46848924,46863936,46864045,47046173	No	Yes	No	bcc_64641|Cycle_1|Type_1	30,30	46781755,47046173	psi1:0.5,psi2:0.769230769231	C1_1,C2_30	C1_1,C2_9	Yes
ENSG00000174373	RALGAPA1	chr14:36121048-36125043	-	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,111,31	36121079,36123573,36123683,36125013	No	No	No	bcc_63186|Cycle_0|Type_1	31,31	36121079,36125013	psi1:0.904761904762,psi2:1.0	C1_38,C2_9	C1_4,C2_0	Yes
ENSG00000198625	MDM4	chr1:204513768-204515955	+	altD	15	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):204513812,204515925	44,31	204513812,204515925	No	No	No	bcc_62387|Cycle_0|Type_1	29,31	204513797,204515925	psi1:0.9,psi2:1.0	C1_18,C2_4	C1_2,C2_0	Yes
ENSG00000189283	FHIT	chr3:59735266-59737975	-	altA	11	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	39,29	59735305,59737947	No	No	No	bcc_62039|Cycle_0|Type_1	28,29	59735294,59737947	psi1:0.571428571429,psi2:0.428571428571	C1_8,C2_3	C1_6,C2_4	Yes
ENSG00000184182,ENSG00000258984	UBE2F,UBE2F-SCLY	chr2:238896603-238925238	+	ES	66	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,66,31	238896634,238903386,238903451,238925208	No	Yes	No	bcc_54437|Cycle_2|Type_1	31,31	238896634,238925208	psi1:1.0,psi2:0.954545454545	C1_28,C2_42	C1_0,C2_2	Yes
ENSG00000237765	FAM200B	chr4:15683562-15687888	+	altD	53	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	82,30	15683644,15687859	No	No	No	bcc_49992|Cycle_0|Type_1	29,30	15683591,15687859	psi1:0.388888888889,psi2:0.25	C1_7,C2_2	C1_11,C2_6	Yes
ENSG00000123562	MORF4L2	chrX:102933498-102940129	-	altA	20	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	50,31	102933548,102940099	No	Yes	No	bcc_30877|Cycle_8|Type_1	30,31	102933528,102940099	psi1:0.132075471698,psi2:0.0512820512821	C1_7,C2_2	C1_46,C2_37	Yes
ENSG00000073921	PICALM	chr11:85687694-85692202	-	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,24,31	85687725,85689113,85689136,85692172	No	No	No	bcc_13923|Cycle_0|Type_1	31,31	85687725,85692172	psi1:0.79012345679,psi2:0.890625	C1_64,C2_57	C1_17,C2_7	Yes
ENSG00000135069	PSAT1	chr9:80932689-80943927	+	ES	138	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,138,31	80932720,80942967,80943104,80943897	No	No	No	bcc_44321|Cycle_0|Type_1	31,31	80932720,80943897	psi1:0.940366972477,psi2:0.993103448276	C1_205,C2_144	C1_13,C2_1	Yes
ENSG00000088682	COQ9	chr16:57486818-57490519	+	altA	78	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):57486848,57490416	30,104	57486848,57490416	No	No	No	bcc_59876|Cycle_0|Type_1	30,26	57486848,57490494	psi1:1.0,psi2:0.947368421053	C1_28,C2_54	C1_0,C2_3	Yes
ENSG00000181192	DHTKD1	chr10:12149983-12159701	+	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,165,30	12150014,12154899,12155063,12159672	No	No	No	bcc_11782|Cycle_2|Type_1	31,30	12150014,12159672	psi1:0.875,psi2:0.954022988506	C1_21,C2_83	C1_3,C2_4	Yes
ENSG00000168958	MFF	chr2:228205065-228217260	+	ES	159	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,159,31	228205096,228211942,228212100,228217230	No	Yes	No	bcc_45905|Cycle_8|Type_1	31,31	228205096,228217230	psi1:0.95,psi2:1.0	C1_95,C2_53	C1_5,C2_0	Yes
ENSG00000073712	FERMT2	chr14:53327153-53331149	-	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,21,31	53327183,53327732,53327752,53331119	No	No	No	bcc_34957|Cycle_0|Type_1	30,31	53327183,53331119	psi1:0.176470588235,psi2:0.0869565217391	C1_3,C2_2	C1_14,C2_21	Yes
ENSG00000125676	THOC2	chrX:122744778-122745321	-	altA	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	36,31	122744814,122745291	No	No	No	bcc_36959|Cycle_0|Type_1	30,31	122744808,122745291	psi1:0.666666666667,psi2:0.785714285714	C1_8,C2_11	C1_4,C2_3	(AT:122745291,TT:122744808);(AT:122745291,GT:122744814)
ENSG00000215252	GOLGA8B	chr15:34820918-34821249	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):34821219,34820951	33,31	34820951,34821219	Yes	No	No	bcc_55227|Cycle_0|Type_1	30,31	34820948,34821219	psi1:0.785714285714,psi2:1.0	C1_22,C2_2	C1_6,C2_0	Yes
ENSG00000175265	GOLGA8A	chr15:34674697-34675028	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):34674730,34674998	33,31	34674730,34674998	Yes	No	No	bcc_55227|Cycle_0|Type_1	30,31	34674727,34674998	psi1:0.785714285714,psi2:1.0	C1_22,C2_2	C1_6,C2_0	Yes
ENSG00000165792	METTL17	chr14:21464839-21464998	+	altA	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,55	21464870,21464944	No	Yes	No	bcc_53225|Cycle_2|Type_1	31,28	21464870,21464971	psi1:1.0,psi2:0.916666666667	C1_6,C2_22	C1_0,C2_2	Yes
ENSG00000172375	C2CD2L	chr11:118984391-118984595	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	118984422,118984562	No	No	No	bcc_50615|Cycle_0|Type_1	31,31	118984422,118984565	psi1:0.285714285714,psi2:0	C1_6,C2_0	C1_15,C2_1	Yes
ENSG00000135124	P2RX4	chr12:121648071-121659745	+	ES	148	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,148,30	121648101,121654937,121655084,121659716	No	No	No	bcc_66168|Cycle_0|Type_1	30,30	121648101,121659716	psi1:1.0,psi2:0.866666666667	C1_2,C2_13	C1_0,C2_2	Yes
ENSG00000122515	ZMIZ2	chr7:44800161-44801077	+	altA	27	No	-	protein_coding	2_ss_annotated_(over_3_ss):44800192,44801048	31,57	44800192,44801021	No	No	No	bcc_46145|Cycle_2|Type_1	31,30	44800192,44801048	psi1:0.333333333333,psi2:0.2	C1_4,C2_1	C1_8,C2_4	Yes
ENSG00000130813	C19orf66	chr19:10201998-10202165	+	IR	106	Yes	-	protein_coding	no_known_ss	167	-	No	Yes	No	bcc_16490|Cycle_1|Type_1	31,30	10202029,10202136	psi1:1.0,psi2:0.866666666667	C1_2,C2_13	C1_0,C2_2	Yes
ENSG00000175061	FAM211A-AS1	chr17:16342697-16343003	+	altA	79	Yes	-	processed_transcript	all_splice_sites_known_(3_ss)	31,109	16342728,16342895	No	Yes	No	bcc_27470|Cycle_4|Type_1	31,30	16342728,16342974	psi1:0.969696969697,psi2:0.90243902439	C1_32,C2_37	C1_1,C2_4	Yes
ENSG00000187109	NAP1L1	chr12:76441467-76442202	-	altAD	673	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):76441498,76442173	414,320	76441881,76441883	No	Yes	No	bcc_14511|Cycle_17|Type_1	31,30	76441498,76442173	psi1:0.929775280899,psi2:0.828571428571	C1_331,C2_58	C1_25,C2_12	-;(AC:76442173,CT:76441498)
ENSG00000145391	SETD7	chr4:140428110-140428231	-	IR	60	No	-	protein_coding	no_known_ss	121	-	No	No	No	bcc_36670|Cycle_0|Type_1	30,31	140428140,140428201	psi1:1.0,psi2:0.959183673469	C1_36,C2_47	C1_0,C2_2	(AA:140428201,AT:140428140)
ENSG00000005483	KMT2E	chr7:104750784-104751247	+	IR	402	No	Yes	protein_coding	no_known_ss	463	-	No	Yes	No	bcc_2285|Cycle_3|Type_1	31,30	104750815,104751218	psi1:0.909090909091,psi2:1.0	C1_50,C2_12	C1_5,C2_0	Yes
ENSG00000137776	SLTM	chr15:59192051-59204764	-	altA	57	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	85,28,3	59192136,59193459,59193486,59204762	No	Yes	No	bcc_45443|Cycle_4|Type_1	28,28,3	59192079,59193459,59193486,59204762	psi1:0.842105263158,psi2:1.0	C1_16,C2_2	C1_3,C2_0	Yes
ENSG00000151150	ANK3	chr10:61894088-61898752	-	altA	15	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):61898722,61894131	43,31	61894131,61898722	No	Yes	No	bcc_17104|Cycle_0|Type_1	28,31	61894116,61898722	psi1:0.736842105263,psi2:1.0	C1_14,C2_1	C1_5,C2_0	Yes
ENSG00000155463	OXA1L	chr14:23239457-23239698	-	IR	182	Yes	Yes	protein_coding	no_known_ss	241	-	No	No	No	bcc_46351|Cycle_0|Type_1	30,29	23239487,23239670	psi1:0.463414634146,psi2:0.328947368421	C1_19,C2_25	C1_22,C2_51	(AG:23239670,GT:23239487)
ENSG00000154265	ABCA5	chr17:67267400-67270130	-	altD	16	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,47	67267430,67270084	No	No	No	bcc_37939|Cycle_0|Type_1	30,31	67267430,67270100	psi1:0.5,psi2:0.636363636364	C1_3,C2_7	C1_3,C2_4	Yes
ENSG00000184500	PROS1	chr3:93646222-93692545	-	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,96,28	93646251,93647546,93647641,93692518	No	No	No	bcc_39672|Cycle_0|Type_1	29,28	93646251,93692518	psi1:0.2,psi2:0.453125	C1_1,C2_29	C1_4,C2_35	Yes
ENSG00000265681	RPL17	chr18:47017924-47018673	-	altD	17	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,46	47017954,47018628	No	No	No	bcc_22510|Cycle_0|Type_1	30,29	47017954,47018645	psi1:0.47619047619,psi2:0.344827586207	C1_10,C2_10	C1_11,C2_19	Yes
ENSG00000169032	MAP2K1	chr15:66729200-66737024	+	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,78,31	66729230,66735618,66735695,66736994	No	No	No	bcc_37322|Cycle_0|Type_1	30,31	66729230,66736994	psi1:0.93288590604,psi2:1.0	C1_139,C2_49	C1_10,C2_0	Yes
ENSG00000196562	SULF2	chr20:46287105-46288470	-	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,30	46287136,46288143,46288196,46288441	No	No	No	bcc_27995|Cycle_0|Type_1	31,30	46287136,46288441	psi1:1.0,psi2:0.950617283951	C1_42,C2_77	C1_0,C2_4	Yes
ENSG00000147382	FAM58A	chrX:152853824-152857994	-	altA	60	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	88,31	152853912,152857964	No	No	No	bcc_64596|Cycle_0|Type_1	28,31	152853852,152857964	psi1:0.555555555556,psi2:0.6875	C1_5,C2_11	C1_4,C2_5	Yes
ENSG00000122566	HNRNPA2B1	chr7:26230050-26230705	-	altD	63	No	-	protein_coding	2_ss_annotated_(over_3_ss):26230080,26230613	30,93	26230080,26230613	No	Yes	No	bcc_6799|Cycle_1|Type_1	30,30	26230080,26230676	psi1:0.861111111111,psi2:0.939393939394	C1_31,C2_62	C1_5,C2_4	(AC:26230613,CT:26230080);(GC:26230676,CT:26230080)
ENSG00000149929	HIRIP3	chr16:30005099-30006454	-	ES	938	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,938,31	30005129,30005227,30006164,30006424	No	No	No	bcc_55594|Cycle_0|Type_1	30,31	30005129,30006424	psi1:0.974522292994,psi2:0.909090909091	C1_153,C2_30	C1_4,C2_3	Yes
ENSG00000047849	MAP4	chr3:47910787-47912377	-	altD	45	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,75	47910817,47912303	No	Yes	No	bcc_6458|Cycle_4|Type_1	30,30	47910817,47912348	psi1:0.9,psi2:0.807692307692	C1_36,C2_21	C1_4,C2_5	Yes
ENSG00000123562	MORF4L2	chrX:102931948-102940129	-	ES	102	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,102,31	102931979,102933427,102933528,102940099	No	Yes	No	bcc_30877|Cycle_0|Type_1	31,31	102931979,102940099	psi1:0.928338762215,psi2:0.992366412214	C1_285,C2_130	C1_22,C2_1	Yes
ENSG00000102081	FMR1	chrX:147027106-147030281	+	altA	51	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,79	147027136,147030203	No	No	No	bcc_34665|Cycle_0|Type_1	30,28	147027136,147030254	psi1:0.789473684211,psi2:1.0	C1_45,C2_4	C1_12,C2_0	Yes
ENSG00000124275	MTRR	chr5:7871005-7875400	+	ES	154	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,154,30	7871036,7873486,7873639,7875371	No	No	No	bcc_61103|Cycle_1|Type_1	31,30	7871036,7875371	psi1:1.0,psi2:0.96	C1_18,C2_24	C1_0,C2_1	Yes
ENSG00000129351	ILF3	chr19:10793349-10793841	+	altA	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,41	10793380,10793801	No	No	No	bcc_38014|Cycle_0|Type_1	31,29	10793380,10793813	psi1:0.411764705882,psi2:0.25	C1_7,C2_1	C1_10,C2_3	Yes
ENSG00000198919	DZIP3	chr3:108403158-108406852	+	ES	140	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,140,30	108403188,108405292,108405431,108406823	No	No	No	bcc_53878|Cycle_0|Type_1	30,30	108403188,108406823	psi1:0.851851851852,psi2:1.0	C1_23,C2_3	C1_4,C2_0	Yes
ENSG00000179912,ENSG00000258830	R3HDM2,RP11-123K3.4	chr12:57677810-57682822	-	ES	54	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	29,54,31	57677839,57682640,57682693,57682792	No	No	No	bcc_22799|Cycle_0|Type_1	29,31	57677839,57682792	psi1:0.410256410256,psi2:0	C1_16,C2_0	C1_23,C2_1	Yes
ENSG00000123562	MORF4L2	chrX:102931948-102940129	-	ES	122	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,122,31	102931979,102933427,102933548,102940099	No	Yes	No	bcc_30877|Cycle_3|Type_1	31,31	102931979,102940099	psi1:0.916981132075,psi2:0.989473684211	C1_243,C2_94	C1_22,C2_1	Yes
ENSG00000101084	C20orf24	chr20:35236190-35238033	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,111,30	35236221,35236293,35236403,35238004	No	Yes	No	bcc_50169|Cycle_0|Type_1	31,30	35236221,35238004	psi1:0.4375,psi2:0.268421052632	C1_14,C2_51	C1_18,C2_139	Yes
ENSG00000204054	LINC00963	chr9:132251547-132255724	+	altA	3	No	-	processed_transcript	all_splice_sites_known_(3_ss)	31,30	132251578,132255695	No	Yes	No	bcc_18110|Cycle_9|Type_1	31,27	132251578,132255698	psi1:0,psi2:0.130434782609	C1_0,C2_3	C1_3,C2_20	Yes
ENSG00000072506	HSD17B10	chrX:53458513-53458801	-	altD	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,56	53458542,53458746	No	No	No	bcc_57715|Cycle_0|Type_1	29,29	53458542,53458773	psi1:1.0,psi2:0.9	C1_35,C2_171	C1_0,C2_19	Yes
ENSG00000136279	DBNL	chr7:44097848-44098059	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	44097879,44098028	No	No	No	bcc_50880|Cycle_0|Type_1	31,29	44097879,44098031	psi1:0.416666666667,psi2:0.571428571429	C1_10,C2_4	C1_14,C2_3	Yes
ENSG00000196924	FLNA	chrX:153583411-153585832	-	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,24,31	153583440,153585619,153585642,153585802	No	No	No	bcc_60199|Cycle_0|Type_1	29,31	153583440,153585802	psi1:0.5,psi2:0.368421052632	C1_14,C2_7	C1_14,C2_12	Yes
ENSG00000050426	LETMD1	chr12:51442937-51450162	+	ES_MULTI	289	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,187,102,30	51442968,51449618,51449804,51449927,51450028,51450133	No	Yes	No	bcc_42229|Cycle_3|Type_1	31,30	51442968,51450133	psi1:0.959183673469,psi2:1.0	C1_47,C2_33	C1_2,C2_0	Yes
ENSG00000231584	FAHD2CP	chr2:96684978-96685314	-	IR	277	Yes	-	pseudogene	no_known_ss	336	-	No	Yes	Yes	bcc_56840|Cycle_22|Type_1	30,29	96685008,96685286	psi1:0.486111111111,psi2:0.714285714286	C1_35,C2_5	C1_37,C2_2	(AG:96685286,GT:96685008)
ENSG00000138698	RAP1GDS1	chr4:99182689-99214588	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	99182720,99214556	Yes	No	No	bcc_3420|Cycle_0|Type_1	31,30	99182720,99214559	psi1:0.0952380952381,psi2:0.2	C1_2,C2_1	C1_19,C2_4	Yes
ENSG00000123562	MORF4L2	chrX:102931948-102940129	-	ES	153	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,153,31	102931979,102933427,102933579,102940099	No	Yes	No	bcc_30877|Cycle_1|Type_1	31,31	102931979,102940099	psi1:0.922535211268,psi2:0.990654205607	C1_262,C2_106	C1_22,C2_1	Yes
ENSG00000148468	FAM171A1	chr10:15256572-15262972	-	ES	115	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,115,30	15256600,15257995,15258109,15262943	No	No	No	bcc_740|Cycle_0|Type_1	28,30	15256600,15262943	psi1:0.891891891892,psi2:1.0	C1_33,C2_6	C1_4,C2_0	Yes
ENSG00000127952	STYXL1	chr7:75625887-75633106	-	ES_altD	66	No	-	protein_coding	3_ss_annotated_(over_5_ss):75630208,75633076,75625917	30,65,32	75625917,75630208,75630272,75633075	No	Yes	No	bcc_50810|Cycle_1|Type_1	30,31	75625917,75633076	psi1:0.857142857143,psi2:0.945945945946	C1_6,C2_35	C1_1,C2_2	(AC:75633076,CT:75625917);(TA:75633075,CT:75630272);(AC:75630208,CT:75625917)
ENSG00000259494,ENSG00000173867	MRPL46,RP11-97O12.7	chr15:89008075-89008848	-	altA	3	No	Yes	protein_coding,processed_transcript	2_ss_annotated_(over_3_ss):89008818,89008107	32,31	89008107,89008818	No	No	No	bcc_55173|Cycle_0|Type_1	29,31	89008104,89008818	psi1:1.0,psi2:0.927536231884	C1_19,C2_64	C1_0,C2_5	Yes
ENSG00000159352	PSMD4	chr1:151238557-151238812	+	altD	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	40,29	151238597,151238784	No	No	No	bcc_22977|Cycle_0|Type_1	31,29	151238588,151238784	psi1:0.0933333333333,psi2:0.030303030303	C1_7,C2_2	C1_68,C2_64	Yes
ENSG00000104067	TJP1	chr15:30053806-30054568	-	ES_altA	136	Yes	Yes	protein_coding	2_ss_annotated_(over_5_ss):30053972,30054538	100,65,31	30053906,30053908,30053972,30054538	No	Yes	No	bcc_14197|Cycle_1|Type_1	29,31	30053835,30054538	psi1:0.92,psi2:1.0	C1_23,C2_6	C1_2,C2_0	-;(AC:30054538,CT:30053835);(AC:30054538,CT:30053972)
ENSG00000157827	FMNL2	chr2:153497397-153504339	+	ES	47	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):153497428,153504310	31,47,30	153497428,153501948,153501994,153504310	No	Yes	No	bcc_40062|Cycle_2|Type_1	31,30	153497428,153504310	psi1:0.140495867769,psi2:0.5	C1_17,C2_1	C1_104,C2_1	Yes
ENSG00000063244	U2AF2	chr19:56180504-56180839	+	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	43,30	56180547,56180810	No	No	No	bcc_64274|Cycle_0|Type_1	31,30	56180535,56180810	psi1:0.0857142857143,psi2:0.171428571429	C1_3,C2_6	C1_32,C2_29	(GC:56180547,AG:56180810);(GT:56180535,AG:56180810)
ENSG00000101901	ALG13	chrX:110925434-110928220	+	altD	59	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	88,28	110925522,110928193	No	No	No	bcc_24069|Cycle_0|Type_1	29,28	110925463,110928193	psi1:0.833333333333,psi2:0.928571428571	C1_5,C2_26	C1_1,C2_2	Yes
ENSG00000100897	DCAF11	chr14:24584904-24586153	+	altD	23	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	54,28	24584958,24586126	No	Yes	No	bcc_22732|Cycle_1|Type_1	31,28	24584935,24586126	psi1:0.818181818182,psi2:0.911764705882	C1_9,C2_31	C1_2,C2_3	Yes
ENSG00000123562	MORF4L2	chrX:102931948-102940129	-	ES_MULTI	151	Yes	-	protein_coding	all_splice_sites_known_(6_ss)	31,102,49,31	102931979,102933427,102933528,102939609,102939657,102940099	No	Yes	No	bcc_30877|Cycle_4|Type_1	31,31	102931979,102940099	psi1:0.921428571429,psi2:0.990196078431	C1_258,C2_101	C1_22,C2_1	Yes
ENSG00000145247	OCIAD2	chr4:48899845-48906531	-	ES	97	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,97,31	48899874,48901846,48901942,48906501	No	No	No	bcc_44609|Cycle_0|Type_1	29,31	48899874,48906501	psi1:0.907692307692,psi2:0.968553459119	C1_59,C2_154	C1_6,C2_5	Yes
ENSG00000050426	LETMD1	chr12:51442938-51449648	+	ES_MULTI	199	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,116,83,31	51442968,51445875,51445990,51447561,51447643,51449618	No	Yes	No	bcc_42229|Cycle_1|Type_1	30,31	51442968,51449618	psi1:0.925925925926,psi2:1.0	C1_50,C2_14	C1_4,C2_0	Yes
ENSG00000015171	ZMYND11	chr10:282824-285407	+	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,93,30	282855,283525,283617,285378	No	No	No	bcc_36024|Cycle_0|Type_1	31,30	282855,285378	psi1:0.93,psi2:1.0	C1_93,C2_28	C1_7,C2_0	Yes
ENSG00000170854	MINA	chr3:97668826-97669660	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	97668859,97669630	No	No	No	bcc_31670|Cycle_0|Type_1	30,31	97668856,97669630	psi1:0.75,psi2:0.857142857143	C1_9,C2_6	C1_3,C2_1	Yes
ENSG00000128581	RABL5	chr7:100959792-100962266	-	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,30	100959823,100961405,100961494,100962237	No	No	No	bcc_57611|Cycle_0|Type_1	31,30	100959823,100962237	psi1:0.944444444444,psi2:0.857142857143	C1_34,C2_6	C1_2,C2_1	Yes
ENSG00000176261	ZBTB8OS	chr1:33093114-33116060	-	ES_MULTI	283	Yes	-	protein_coding	all_splice_sites_known_(10_ss)	31,53,83,122,25,31	33093145,33097428,33097480,33099246,33099328,33099552,33099673,33100369,33100393,33116030	No	Yes	No	bcc_8003|Cycle_7|Type_1	31,31	33093145,33116030	psi1:1.0,psi2:0.961538461538	C1_53,C2_75	C1_0,C2_3	Yes
ENSG00000164548	TRA2A	chr7:23561431-23561780	-	IR	291	No	-	protein_coding	no_known_ss	349	-	No	Yes	No	bcc_14513|Cycle_0|Type_1	28,30	23561459,23561751	psi1:0.892307692308,psi2:1.0	C1_58,C2_10	C1_7,C2_0	Yes
ENSG00000122545	SEPT7	chr7:35840854-35872444	+	altA	6	No	Yes	protein_coding	3_ss_annotated_(over_5_ss):35840880,35872408,35871102	26,5,37	35840880,35871102,35871106,35872408	No	Yes	No	bcc_5294|Cycle_4|Type_1	26,5,31	35840880,35871102,35871106,35872414	psi1:0.752136752137,psi2:1.0	C1_88,C2_6	C1_29,C2_0	Yes
ENSG00000234741	GAS5	chr1:173834390-173834675	+	IR	227	Yes	-	processed_transcript	no_known_ss	285	-	No	Yes	Yes	bcc_2642|Cycle_3|Type_1	30,28	173834420,173834648	psi1:0.333333333333,psi2:0.461538461538	C1_25,C2_18	C1_50,C2_21	(CT:173834420,AC:173834648)
ENSG00000141480	ARRB2	chr17:4614008-4619296	+	ES	31	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,31,29	4614039,4618308,4618338,4619268	No	No	No	bcc_74149|Cycle_0|Type_1	31,29	4614039,4619268	psi1:0.571428571429,psi2:0.692307692308	C1_8,C2_9	C1_6,C2_4	Yes
ENSG00000180104	EXOC3	chr5:454135-462103	+	ES_MULTI	345	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,118,126,101,29	454166,457004,457121,458015,458140,459474,459574,462075	No	No	No	bcc_5828|Cycle_0|Type_1	31,29	454166,462075	psi1:0.9625,psi2:1.0	C1_77,C2_55	C1_3,C2_0	Yes
ENSG00000150456	N6AMT2	chr13:21306230-21331624	-	ES	83	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,83,31	21306260,21311862,21311944,21331594	No	Yes	No	bcc_55783|Cycle_1|Type_1	30,31	21306260,21331594	psi1:0.625,psi2:0.5	C1_5,C2_3	C1_3,C2_3	Yes
ENSG00000115525	ST3GAL5	chr2:86075298-86088334	-	altA	177	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	206,31	86075504,86088304	No	No	No	bcc_39354|Cycle_0|Type_1	29,31	86075327,86088304	psi1:0.678571428571,psi2:0.5	C1_19,C2_2	C1_9,C2_2	Yes
ENSG00000005483	KMT2E	chr7:104750784-104751247	+	altD	234	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	265,30	104751049,104751218	No	Yes	No	bcc_2285|Cycle_1|Type_1	31,30	104750815,104751218	psi1:0.903846153846,psi2:1.0	C1_47,C2_9	C1_5,C2_0	Yes
ENSG00000146409	SLC18B1	chr6:133092237-133094160	-	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,75,29	133092268,133093271,133093345,133094132	No	No	No	bcc_22193|Cycle_0|Type_1	31,29	133092268,133094132	psi1:0.931818181818,psi2:1.0	C1_41,C2_12	C1_3,C2_0	Yes
ENSG00000077380	DYNC1I2	chr2:172549373-172563826	+	altA	54	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,84	172549404,172563743	No	No	No	bcc_37337|Cycle_0|Type_1	31,30	172549404,172563797	psi1:0.13698630137,psi2:0	C1_10,C2_0	C1_63,C2_8	Yes
ENSG00000109171	SLAIN2	chr4:48385770-48422172	+	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,78,31	48385801,48396593,48396670,48422142	No	No	No	bcc_36192|Cycle_0|Type_1	31,31	48385801,48422142	psi1:0.25,psi2:0.379310344828	C1_3,C2_11	C1_9,C2_18	Yes
ENSG00000008294	SPAG9	chr17:49084657-49091622	-	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,12,30	49084687,49086492,49086503,49091593	No	No	No	bcc_7966|Cycle_0|Type_1	30,30	49084687,49091593	psi1:0.0769230769231,psi2:0	C1_3,C2_0	C1_36,C2_9	Yes
ENSG00000148795	CYP17A1	chr10:104591337-104591522	+	IR	123	No	-	protein_coding	no_known_ss	185	-	No	No	No	bcc_58161|Cycle_0|Type_1	31,31	104591368,104591492	psi1:1.0,psi2:0.8	C1_1,C2_12	C1_0,C2_3	(CT:104591368,AC:104591492)
ENSG00000147642	SYBU	chr8:110631251-110655002	-	IR	3	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):110631268,110654957	17,46	-	No	No	No	bcc_48678|Cycle_0|Type_1	17,12,31	110631268,110654957,110654968,110654972	psi1:0.923076923077,psi2:1.0	C1_12,C2_3	C1_1,C2_0	(GT:110654972,TG:110654968);(AC:110654957,CT:110631268)
ENSG00000166352	C11orf74	chr11:36631759-36669595	+	ES_MULTI	222	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,155,67,30	36631789,36654834,36654988,36657601,36657667,36669566	No	No	No	bcc_53683|Cycle_0|Type_1	30,30	36631789,36669566	psi1:0.890909090909,psi2:1.0	C1_49,C2_8	C1_6,C2_0	Yes
ENSG00000129071	MBD4	chr3:129150391-129151427	-	altD	53	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,82	129150421,129151346	No	Yes	No	bcc_13296|Cycle_1|Type_1	30,29	129150421,129151399	psi1:0.882352941176,psi2:0.951219512195	C1_15,C2_39	C1_2,C2_2	Yes
ENSG00000105176	URI1	chr19:30503408-30506471	+	altA	649	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,678	30503438,30505794	No	No	No	bcc_33479|Cycle_1|Type_1	30,29	30503438,30506443	psi1:0.944444444444,psi2:0.987394957983	C1_153,C2_235	C1_9,C2_3	Yes
ENSG00000196961	AP2A1	chr19:50304285-50304722	+	altA	48	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):50304315,50304647	30,76	50304315,50304647	No	No	No	bcc_21187|Cycle_0|Type_1	30,28	50304315,50304695	psi1:0.953488372093,psi2:1.0	C1_41,C2_20	C1_2,C2_0	Yes
ENSG00000076053	RBM7	chr11:114271458-114276456	+	ES_MULTI	248	Yes	Yes	protein_coding	all_splice_sites_known_(7_ss)	31,163,88,26	114271489,114272420,114272582,114273550,114273637,114276431	No	Yes	No	bcc_51949|Cycle_5|Type_1	31,29	114271489,114276428	psi1:0.960784313725,psi2:1.0	C1_49,C2_31	C1_2,C2_0	Yes
ENSG00000106263	EIF3B	chr7:2419115-2419943	+	altA	75	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,105	2419146,2419839	No	Yes	No	bcc_41965|Cycle_10|Type_1	31,30	2419146,2419914	psi1:0.72,psi2:0.592592592593	C1_18,C2_32	C1_7,C2_22	Yes
ENSG00000134283	PPHLN1	chr12:42720000-42729715	+	ES	43	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,43,31	42720031,42726462,42726504,42729685	No	No	No	bcc_11614|Cycle_1|Type_1	31,31	42720031,42729685	psi1:0.181818181818,psi2:0.3	C1_6,C2_3	C1_27,C2_7	Yes
ENSG00000163539	CLASP2	chr3:33602432-33612249	-	ES	3	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,3,31	33602463,33605456,33605458,33612219	No	No	No	bcc_23692|Cycle_0|Type_1	31,31	33602463,33612219	psi1:0.661538461538,psi2:1.0	C1_43,C2_2	C1_22,C2_0	Yes
ENSG00000134440	NARS	chr18:55287851-55288970	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	55287883,55288940	No	No	No	bcc_41960|Cycle_0|Type_1	29,31	55287880,55288940	psi1:0.821917808219,psi2:0.666666666667	C1_60,C2_6	C1_13,C2_3	Yes
ENSG00000122958	VPS26A	chr10:70892772-70916792	+	ES	76	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,76,30	70892803,70915568,70915643,70916763	No	No	No	bcc_34826|Cycle_0|Type_1	31,30	70892803,70916763	psi1:0.91935483871,psi2:1.0	C1_57,C2_13	C1_5,C2_0	Yes
ENSG00000162813	BPNT1	chr1:220233104-220240674	-	ES	198	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,198,31	220233133,220236099,220236296,220240644	No	No	No	bcc_8777|Cycle_2|Type_1	29,31	220233133,220240644	psi1:0.924528301887,psi2:0.978260869565	C1_49,C2_45	C1_4,C2_1	Yes
ENSG00000012660	ELOVL5	chr6:53135494-53139915	-	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,125,28	53135525,53138018,53138142,53139888	No	No	No	bcc_34783|Cycle_0|Type_1	31,28	53135525,53139888	psi1:0.914728682171,psi2:0.975308641975	C1_118,C2_79	C1_11,C2_2	Yes
ENSG00000067836	ROGDI	chr16:4850549-4851534	-	ES	55	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,55,31	4850579,4851268,4851322,4851504	No	No	No	bcc_68038|Cycle_0|Type_1	30,31	4850579,4851504	psi1:0.857142857143,psi2:1.0	C1_60,C2_7	C1_10,C2_0	Yes
ENSG00000176261	ZBTB8OS	chr1:33097449-33116038	-	ES_MULTI	205	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,83,122,25,5	33097480,33099246,33099328,33099552,33099673,33100369,33100393,33116034	No	Yes	No	bcc_8003|Cycle_27|Type_1	31,25,5	33097480,33100369,33100393,33116034	psi1:1.0,psi2:0.966666666667	C1_47,C2_58	C1_0,C2_2	Yes
ENSG00000132840	BHMT2	chr5:78378749-78379042	-	IR	235	Yes	Yes	protein_coding	no_known_ss	293	-	No	No	No	bcc_5345|Cycle_0|Type_1	30,28	78378779,78379015	psi1:0.6,psi2:0.340909090909	C1_3,C2_30	C1_2,C2_58	(AG:78379015,GT:78378779)
ENSG00000064490	RFXANK	chr19:19304911-19307804	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	19304942,19307772	No	No	No	bcc_68444|Cycle_0|Type_1	31,30	19304942,19307775	psi1:0.533333333333,psi2:0.666666666667	C1_8,C2_4	C1_7,C2_2	Yes
ENSG00000087087	SRRT	chr7:100482633-100482866	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,33	100482661,100482834	No	No	No	bcc_53231|Cycle_0|Type_1	28,30	100482661,100482837	psi1:0.777777777778,psi2:0.666666666667	C1_7,C2_8	C1_2,C2_4	Yes
ENSG00000073008	PVR	chr19:45161172-45164589	+	unclassified	135	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	6,159,31	45161178,45162010,45162168,45164559	No	No	No	bcc_22333|Cycle_0|Type_1	6,24,31	45161178,45162010,45162033,45164559	psi1:1.0,psi2:0.777777777778	C1_2,C2_28	C1_0,C2_8	(GT:45161178,AG:45162010);(GT:45162168,AG:45164559);(GC:45162033,AG:45164559)
ENSG00000078674	PCM1	chr8:17849154-17851020	+	altD	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	55,29	17849209,17850992	No	No	No	bcc_32450|Cycle_1|Type_1	31,29	17849185,17850992	psi1:0.678571428571,psi2:0.789473684211	C1_19,C2_15	C1_9,C2_4	Yes
ENSG00000128708	HAT1	chr2:172782121-172809429	+	ES	76	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,76,31	172782151,172803228,172803303,172809399	No	No	No	bcc_53013|Cycle_0|Type_1	30,31	172782151,172809399	psi1:0.939393939394,psi2:1.0	C1_62,C2_20	C1_4,C2_0	Yes
ENSG00000133657	ATP13A3	chr3:194126816-194134518	-	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,90,31	194126845,194132928,194133017,194134488	No	No	No	bcc_10389|Cycle_0|Type_1	29,31	194126845,194134488	psi1:1.0,psi2:0.892857142857	C1_8,C2_50	C1_0,C2_6	Yes
ENSG00000138069	RAB1A	chr2:65315793-65325135	-	ES_MULTI	228	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,132,96,31	65315824,65316073,65316204,65318117,65318212,65325105	No	Yes	No	bcc_33706|Cycle_0|Type_1	31,31	65315824,65325105	psi1:0.972399150743,psi2:1.0	C1_458,C2_527	C1_13,C2_0	Yes
ENSG00000166681	NGFRAP1	chrX:102632003-102632464	+	altA	47	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,74	102632034,102632391	No	Yes	No	bcc_35398|Cycle_0|Type_1	31,27	102632034,102632438	psi1:0.452914798206,psi2:0.25	C1_101,C2_6	C1_122,C2_18	Yes
ENSG00000189376,ENSG00000259305	C8orf76,ZHX1-C8ORF76	chr8:124238842-124250067	-	ES	458	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,458,30	124238872,124243540,124243997,124250038	No	Yes	Yes	bcc_47442|Cycle_0|Type_1	30,30	124238872,124250038	psi1:1.0,psi2:0.967213114754	C1_48,C2_59	C1_0,C2_2	Yes
ENSG00000110011	DNAJC4	chr11:63999405-64001394	+	ES_MULTI	347	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,185,162,29	63999436,63999902,64000086,64000176,64000337,64001366	No	No	No	bcc_63872|Cycle_1|Type_1	31,29	63999436,64001366	psi1:0.935483870968,psi2:0.981818181818	C1_29,C2_54	C1_2,C2_1	Yes
ENSG00000179295	PTPN11	chr12:112919979-112924309	+	altA	12	No	-	protein_coding	2_ss_annotated_(over_3_ss):112920009,112924279	30,43	112920009,112924267	No	No	No	bcc_28667|Cycle_0|Type_1	30,31	112920009,112924279	psi1:0.236842105263,psi2:0.111111111111	C1_9,C2_1	C1_29,C2_8	(GT:112920009,TG:112924267);(GT:112920009,AG:112924279)
ENSG00000149532	CPSF7	chr11:61183960-61187450	-	altD	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,57	61183991,61187394	No	No	No	bcc_37562|Cycle_0|Type_1	31,30	61183991,61187421	psi1:0.307692307692,psi2:0.428571428571	C1_4,C2_3	C1_9,C2_4	Yes
ENSG00000144283	PKP4	chr2:159477597-159477773	+	altD	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):159477633,159477743	36,31	159477633,159477743	No	No	No	bcc_62108|Cycle_0|Type_1	30,31	159477627,159477743	psi1:0.75,psi2:0.888888888889	C1_36,C2_8	C1_12,C2_1	Yes
ENSG00000144674	GOLGA4	chr3:37396647-37407626	+	altA	26	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):37407571,37396678	31,56	37396678,37407571	No	Yes	No	bcc_39603|Cycle_1|Type_1	31,30	37396678,37407597	psi1:1.0,psi2:0.911111111111	C1_8,C2_41	C1_0,C2_4	Yes
ENSG00000081154	PCNP	chr3:101293092-101304311	+	ES	215	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,215,31	101293123,101298634,101298848,101304281	No	Yes	No	bcc_6225|Cycle_3|Type_1	31,31	101293123,101304281	psi1:0.918629550321,psi2:1.0	C1_429,C2_93	C1_38,C2_0	Yes
ENSG00000123562	MORF4L2	chrX:102931948-102940129	-	ES_MULTI	202	Yes	-	protein_coding	all_splice_sites_known_(6_ss)	31,153,49,31	102931979,102933427,102933579,102939609,102939657,102940099	No	Yes	No	bcc_30877|Cycle_2|Type_1	31,31	102931979,102940099	psi1:0.926666666667,psi2:0.990384615385	C1_278,C2_103	C1_22,C2_1	Yes
ENSG00000090621	PABPC4	chr1:40029383-40030124	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,87,30	40029413,40029508,40029594,40030095	No	Yes	No	bcc_39244|Cycle_0|Type_1	30,30	40029413,40030095	psi1:1.0,psi2:0.88	C1_3,C2_22	C1_0,C2_3	Yes
ENSG00000205670	SMIM11	chr21:35751784-35760953	+	ES	167	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,167,27	35751815,35757776,35757942,35760927	No	Yes	No	bcc_16236|Cycle_3|Type_1	31,27	35751815,35760927	psi1:0.972972972973,psi2:1.0	C1_36,C2_41	C1_1,C2_0	Yes
ENSG00000109919	MTCH2	chr11:47656257-47660281	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,27,31	47656286,47657097,47657123,47660251	No	No	No	bcc_40676|Cycle_0|Type_1	29,31	47656286,47660251	psi1:1.0,psi2:0.930379746835	C1_38,C2_147	C1_0,C2_11	Yes
ENSG00000126214,ENSG00000256500	KLC1,RP11-73M18.2	chr14:104145825-104152005	+	ES_altD	78	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(5_ss)	57,51,31	104145882,104151323,104151373,104151975	No	Yes	No	bcc_42941|Cycle_1|Type_1	30,31	104145855,104151975	psi1:0.861386138614,psi2:1.0	C1_87,C2_10	C1_14,C2_0	Yes
ENSG00000125503	PPP1R12C	chr19:55604204-55604414	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	55604236,55604384	No	No	No	bcc_58438|Cycle_0|Type_1	29,31	55604233,55604384	psi1:0.375,psi2:0.5	C1_3,C2_2	C1_5,C2_2	Yes
ENSG00000116285	ERRFI1	chr1:8075413-8075584	-	altA	16	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	47,30	8075460,8075555	No	No	No	bcc_33597|Cycle_0|Type_1	31,30	8075444,8075555	psi1:0,psi2:0.103896103896	C1_0,C2_8	C1_11,C2_69	Yes
ENSG00000187118	CMC1	chr3:28283273-28357852	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,90,29	28283303,28304782,28304871,28357824	No	No	No	bcc_58267|Cycle_0|Type_1	30,29	28283303,28357824	psi1:0.933333333333,psi2:0.827586206897	C1_14,C2_48	C1_1,C2_10	Yes
ENSG00000196235	SUPT5H	chr19:39936246-39936550	+	altA	78	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,107	39936277,39936444	No	No	No	bcc_55036|Cycle_0|Type_1	31,29	39936277,39936522	psi1:0.891891891892,psi2:1.0	C1_33,C2_5	C1_4,C2_0	Yes
ENSG00000178691	SUZ12	chr17:30302503-30302696	+	IR	133	Yes	Yes	protein_coding	no_known_ss	193	-	No	No	No	bcc_30615|Cycle_4|Type_1	31,29	30302534,30302668	psi1:0.952380952381,psi2:1.0	C1_40,C2_17	C1_2,C2_0	Yes
ENSG00000255974	CYP2A6	chr19:41350648-41351228	-	IR	521	Yes	Yes	protein_coding	no_known_ss	580	-	No	No	No	bcc_1957|Cycle_2|Type_1	29,30	41350677,41351199	psi1:1.0,psi2:0.386654478976	C1_10,C2_423	C1_0,C2_671	Yes
ENSG00000040341,ENSG00000258677	STAU2,RP11-463D19.2	chr8:74601020-74659047	-	ES_MULTI	310	Yes	-	protein_coding,protein_coding	all_splice_sites_known_(8_ss)	28,131,66,113,30	74601048,74621267,74621397,74650519,74650584,74651991,74652103,74659018	No	Yes	No	bcc_19663|Cycle_6|Type_1	28,30	74601048,74659018	psi1:0.906976744186,psi2:1.0	C1_39,C2_7	C1_4,C2_0	Yes
ENSG00000138867	GUCD1	chr22:24939034-24939840	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,31	24939068,24939810	No	No	No	bcc_14901|Cycle_1|Type_1	31,31	24939065,24939810	psi1:0,psi2:0.152173913043	C1_0,C2_7	C1_4,C2_39	Yes
ENSG00000100979	PLTP	chr20:44536512-44538611	-	ES	156	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,156,31	44536543,44538155,44538310,44538581	No	No	No	bcc_59662|Cycle_0|Type_1	31,31	44536543,44538581	psi1:0.971428571429,psi2:1.0	C1_102,C2_99	C1_3,C2_0	Yes
ENSG00000090097	PCBP4	chr3:51993639-51994235	-	ES	129	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,129,31	51993667,51993911,51994039,51994205	No	No	No	bcc_66078|Cycle_0|Type_1	28,31	51993667,51994205	psi1:0.870588235294,psi2:1.0	C1_74,C2_9	C1_11,C2_0	Yes
ENSG00000140105	WARS	chr14:100828228-100841650	-	ES	172	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,172,31	100828258,100835424,100835595,100841620	No	No	No	bcc_53541|Cycle_0|Type_1	30,31	100828258,100841620	psi1:0.916666666667,psi2:0.84	C1_33,C2_21	C1_3,C2_4	Yes
ENSG00000108953	YWHAE	chr17:1268322-1303371	-	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,33,31	1268352,1273003,1273035,1303341	No	No	No	bcc_14415|Cycle_0|Type_1	30,31	1268352,1303341	psi1:0.190883190883,psi2:0.0833333333333	C1_67,C2_8	C1_284,C2_88	Yes
ENSG00000114956	DGUOK	chr2:74154150-74185303	+	ES_MULTI	452	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	29,188,148,116,31	74154179,74173846,74174033,74177712,74177859,74184252,74184367,74185273	No	Yes	No	bcc_58675|Cycle_1|Type_1	29,31	74154179,74185273	psi1:0.932038834951,psi2:0.980392156863	C1_96,C2_100	C1_7,C2_2	Yes
ENSG00000153914	SREK1	chr5:65470838-65473373	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	65470869,65473342	No	No	No	bcc_49241|Cycle_0|Type_1	31,29	65470869,65473345	psi1:0.703703703704,psi2:0.818181818182	C1_19,C2_9	C1_8,C2_2	Yes
ENSG00000117523	PRRC2C	chr1:171481308-171482167	+	altA	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	171481339,171482134	No	No	No	bcc_55531|Cycle_0|Type_1	31,28	171481339,171482140	psi1:0.882352941176,psi2:1.0	C1_30,C2_4	C1_4,C2_0	Yes
ENSG00000005483	KMT2E	chr7:104750785-104750953	-	IR	108	No	Yes	protein_coding	no_known_ss	168	-	No	Yes	No	bcc_2285|Cycle_6|Type_1	30,30	104750815,104750924	psi1:0.866666666667,psi2:1.0	C1_26,C2_3	C1_4,C2_0	(AG:104750924,GT:104750815)
ENSG00000186787	SPIN2B	chrX:57146506-57146868	-	IR	303	No	Yes	protein_coding	no_known_ss	362	-	No	No	No	bcc_15806|Cycle_1|Type_1	28,31	57146534,57146838	psi1:0.90625,psi2:1.0	C1_58,C2_10	C1_6,C2_0	Yes
ENSG00000071054	MAP4K4	chr2:102481467-102482920	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	102481498,102482890	No	No	No	bcc_13169|Cycle_0|Type_1	31,28	102481498,102482893	psi1:0.852941176471,psi2:1.0	C1_29,C2_3	C1_5,C2_0	Yes
ENSG00000081154	PCNP	chr3:101293092-101304311	+	ES	163	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,163,31	101293123,101298686,101298848,101304281	No	Yes	No	bcc_6225|Cycle_2|Type_1	31,31	101293123,101304281	psi1:0.916299559471,psi2:1.0	C1_416,C2_82	C1_38,C2_0	Yes
ENSG00000082701	GSK3B	chr3:119595327-119666145	-	ES_MULTI	447	No	Yes	protein_coding	all_splice_sites_known_(10_ss)	28,98,107,131,111,31	119595355,119624602,119624699,119631551,119631657,119634891,119635021,119642220,119642330,119666115	No	No	No	bcc_24237|Cycle_0|Type_1	28,31	119595355,119666115	psi1:0.967032967033,psi2:1.0	C1_88,C2_63	C1_3,C2_0	Yes
ENSG00000135047	CTSL	chr9:90341139-90342537	+	altD	55	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	84,29	90341223,90342509	No	Yes	No	bcc_52159|Cycle_7|Type_1	29,29	90341168,90342509	psi1:0.307692307692,psi2:0.2	C1_4,C2_6	C1_9,C2_24	Yes
ENSG00000134851	TMEM165	chr4:56290779-56291572	+	IR	732	No	Yes	protein_coding	no_known_ss	793	-	No	No	No	bcc_35734|Cycle_0|Type_1	31,30	56290810,56291543	psi1:0.429906542056,psi2:0.25	C1_92,C2_7	C1_122,C2_21	Yes
ENSG00000172785	CBWD1	chr9:152050-156511	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,87,31	152078,154709,154795,156481	Yes	Yes	No	bcc_11223|Cycle_28|Type_1	28,31	152078,156481	psi1:0.885714285714,psi2:0.949152542373	C1_31,C2_56	C1_4,C2_3	Yes
ENSG00000168575	SLC20A2	chr8:42317499-42323325	-	unclassified	67	Yes	Yes	protein_coding	4_ss_annotated_(over_5_ss):42320608,42320523,42317510,42323295	11,86,31	42317510,42320523,42320608,42323295	No	No	No	bcc_40708|Cycle_0|Type_1	11,19,31	42317510,42320523,42320541,42323295	psi1:0.955555555556,psi2:1.0	C1_43,C2_19	C1_2,C2_0	Yes
ENSG00000048162	NOP16	chr5:175811258-175812252	-	altA	88	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	117,31	175811375,175812222	No	Yes	No	bcc_56016|Cycle_1|Type_1	29,31	175811287,175812222	psi1:1.0,psi2:0.90243902439	C1_6,C2_37	C1_0,C2_4	Yes
ENSG00000120992	LYPLA1	chr8:54960649-54963627	-	altD	26	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):54963572,54960678	29,56	54960678,54963572	No	No	No	bcc_32354|Cycle_0|Type_1	29,30	54960678,54963598	psi1:1.0,psi2:0.883333333333	C1_7,C2_53	C1_0,C2_7	Yes
ENSG00000136450	SRSF1	chr17:56082371-56082805	+	IR	372	No	Yes	protein_coding	no_known_ss	434	-	No	Yes	No	bcc_5527|Cycle_2|Type_1	31,31	56082402,56082775	psi1:0.977011494253,psi2:1.0	C1_170,C2_245	C1_4,C2_0	(CT:56082402,AC:56082775)
ENSG00000155366,ENSG00000271810	RHOC,RP11-426L16.10	chr1:113246399-113249728	-	ES	69	No	-	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	29,69,29	113246428,113247722,113247790,113249700	No	No	No	bcc_32039|Cycle_0|Type_1	29,29	113246428,113249700	psi1:0.666666666667,psi2:0.809523809524	C1_2,C2_17	C1_1,C2_4	Yes
ENSG00000090060	PAPOLA	chr14:97018928-97022216	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):97022184,97018959	31,33	97018959,97022184	No	No	No	bcc_19809|Cycle_0|Type_1	31,30	97018959,97022187	psi1:1.0,psi2:0.914285714286	C1_6,C2_32	C1_0,C2_3	Yes
ENSG00000141552	ANAPC11	chr17:79849678-79851457	+	altD	8	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	39,30	79849717,79851428	No	Yes	No	bcc_61328|Cycle_4|Type_1	31,30	79849709,79851428	psi1:0.545454545455,psi2:0.428571428571	C1_6,C2_6	C1_5,C2_8	Yes
ENSG00000123562	MORF4L2	chrX:102933498-102940129	-	altA	51	No	-	protein_coding	all_splice_sites_known_(3_ss)	81,31	102933579,102940099	No	Yes	No	bcc_30877|Cycle_7|Type_1	30,31	102933528,102940099	psi1:0.386666666667,psi2:0.274509803922	C1_29,C2_14	C1_46,C2_37	Yes
ENSG00000049769	PPP1R3F	chrX:49137893-49138476	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	49137924,49138444	No	No	No	bcc_72848|Cycle_0|Type_1	31,30	49137924,49138447	psi1:0.730769230769,psi2:1.0	C1_19,C2_1	C1_7,C2_0	Yes
ENSG00000075539	FRYL	chr4:48548257-48549631	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	48548288,48549601	No	No	No	bcc_59159|Cycle_0|Type_1	28,31	48548285,48549601	psi1:0.8125,psi2:1.0	C1_13,C2_1	C1_3,C2_0	Yes
ENSG00000103502	CDIPT	chr16:29873926-29874166	-	altA	85	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	115,31	29874041,29874136	No	Yes	No	bcc_58140|Cycle_2|Type_1	30,31	29873956,29874136	psi1:0.9375,psi2:0.982142857143	C1_45,C2_55	C1_3,C2_1	Yes
ENSG00000106263	EIF3B	chr7:2419117-2420079	+	altA	131	Yes	-	protein_coding	1_ss_annotated_(over_3_ss):2419146	29,161	2419146,2419919	No	Yes	No	bcc_41965|Cycle_2|Type_1	29,30	2419146,2420050	psi1:0.863636363636,psi2:0.939024390244	C1_19,C2_77	C1_3,C2_5	Yes
ENSG00000142230	SAE1	chr19:47673149-47706956	+	ES	145	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,145,29	47673180,47700490,47700634,47706928	No	No	No	bcc_27495|Cycle_0|Type_1	31,29	47673180,47706928	psi1:0.951048951049,psi2:0.883720930233	C1_136,C2_38	C1_7,C2_5	Yes
ENSG00000131381	ZFYVE20	chr3:15127437-15137508	-	ES	141	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,141,29	15127468,15131906,15132046,15137480	No	No	No	bcc_46165|Cycle_0|Type_1	31,29	15127468,15137480	psi1:0.933333333333,psi2:1.0	C1_28,C2_7	C1_2,C2_0	Yes
ENSG00000104067	TJP1	chr15:30053806-30054568	-	altA	137	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):30054538,30053972	166,31	30053972,30054538	No	Yes	No	bcc_14197|Cycle_0|Type_1	29,31	30053835,30054538	psi1:0.942857142857,psi2:1.0	C1_33,C2_10	C1_2,C2_0	Yes
ENSG00000082146	STRADB	chr2:202323557-202337707	+	ES	100	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,100,30	202323587,202334676,202334775,202337678	No	No	No	bcc_44039|Cycle_0|Type_1	30,30	202323587,202337678	psi1:1.0,psi2:0.95652173913	C1_29,C2_66	C1_0,C2_3	Yes
ENSG00000205981	DNAJC19	chr3:180703754-180705841	-	ES	75	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):180703784,180704810,180705811	30,75,31	180703784,180704736,180704810,180705811	No	Yes	No	bcc_18052|Cycle_3|Type_1	30,31	180703784,180705811	psi1:0.642857142857,psi2:0.75	C1_27,C2_48	C1_15,C2_16	Yes
ENSG00000123064	DDX54	chr12:113603491-113607604	-	ES	231	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,231,30	113603522,113603607,113603837,113607575	No	No	No	bcc_61435|Cycle_0|Type_1	31,30	113603522,113607575	psi1:1.0,psi2:0.9375	C1_8,C2_30	C1_0,C2_2	Yes
ENSG00000180233	ZNRF2	chr7:30395418-30405680	+	ES	80	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,80,30	30395449,30401993,30402072,30405651	No	No	No	bcc_40412|Cycle_0|Type_1	31,30	30395449,30405651	psi1:0.826086956522,psi2:0.904761904762	C1_19,C2_38	C1_4,C2_4	Yes
ENSG00000079819	EPB41L2	chr6:131186745-131206265	-	ES_MULTI	687	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,123,564,30	131186774,131188599,131188721,131190703,131191266,131206236	No	Yes	No	bcc_46240|Cycle_36|Type_1	29,30	131186774,131206236	psi1:0.932098765432,psi2:1.0	C1_151,C2_36	C1_11,C2_0	Yes
ENSG00000178149	DALRD3	chr3:49053110-49053266	+	IR	96	No	Yes	protein_coding	no_known_ss	156	-	No	No	No	bcc_45082|Cycle_1|Type_1	30,30	49053140,49053237	psi1:0.779069767442,psi2:0.87037037037	C1_67,C2_47	C1_19,C2_7	(CT:49053140,AC:49053237)
ENSG00000075413	MARK3	chr14:103933497-103934446	+	altA	48	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,77	103933528,103934370	No	No	No	bcc_52427|Cycle_0|Type_1	31,29	103933528,103934418	psi1:0.907407407407,psi2:1.0	C1_49,C2_8	C1_5,C2_0	Yes
ENSG00000115875	SRSF7	chr2:38972300-38973866	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,36,31	38972329,38973286,38973321,38973836	No	No	No	bcc_31546|Cycle_0|Type_1	29,31	38972329,38973836	psi1:0.915492957746,psi2:0.834710743802	C1_65,C2_101	C1_6,C2_20	Yes
ENSG00000090686	USP48	chr1:22056294-22062969	-	altD	16	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,47	22056325,22062923	No	No	No	bcc_52104|Cycle_0|Type_1	31,31	22056325,22062939	psi1:0.142857142857,psi2:0	C1_5,C2_0	C1_30,C2_3	Yes
ENSG00000132300	PTCD3	chr2:86357829-86359471	+	ES	29	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,29,31	86357860,86358201,86358229,86359441	No	No	No	bcc_46028|Cycle_0|Type_1	31,31	86357860,86359441	psi1:0.952380952381,psi2:1.0	C1_40,C2_15	C1_2,C2_0	(GT:86358229,AG:86359441);(GC:86357860,AG:86359441);(GC:86357860,AG:86358201)
ENSG00000010327	STAB1	chr3:52557741-52557920	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):52557772,52557887	31,34	52557772,52557887	No	No	No	bcc_66872|Cycle_0|Type_1	31,31	52557772,52557890	psi1:0.5,psi2:0.695652173913	C1_1,C2_16	C1_1,C2_7	Yes
ENSG00000087274	ADD1	chr4:2910301-2916639	+	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,93,29	2910331,2911066,2911158,2916611	No	No	No	bcc_54280|Cycle_0|Type_1	30,29	2910331,2916611	psi1:0.0746268656716,psi2:0	C1_10,C2_0	C1_124,C2_26	Yes
ENSG00000127837	AAMP	chr2:219134229-219134719	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	219134260,219134689	No	No	No	bcc_55497|Cycle_0|Type_1	28,31	219134257,219134689	psi1:0.0967741935484,psi2:0.0384615384615	C1_3,C2_1	C1_28,C2_25	Yes
ENSG00000105699	LSR	chr19:35749936-35757292	+	ES	147	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,147,31	35749967,35753449,35753595,35757262	No	No	No	bcc_34094|Cycle_0|Type_1	31,31	35749967,35757262	psi1:1.0,psi2:0.770642201835	C1_5,C2_84	C1_0,C2_25	Yes
ENSG00000155659	VSIG4	chrX:65247923-65253346	-	ES	282	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,282,31	65247954,65252310,65252591,65253316	No	No	No	bcc_51415|Cycle_2|Type_1	31,31	65247954,65253316	psi1:0.928571428571,psi2:0.977011494253	C1_26,C2_85	C1_2,C2_2	Yes
ENSG00000117335	CD46	chr1:207958996-207966893	+	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,93,30	207959027,207963598,207963690,207966864	No	No	No	bcc_44290|Cycle_0|Type_1	31,30	207959027,207966864	psi1:0.666666666667,psi2:0.5375	C1_18,C2_43	C1_9,C2_37	Yes
ENSG00000163625	WDFY3	chr4:85645717-85654565	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,51,31	85645747,85648014,85648064,85654535	No	No	No	bcc_57320|Cycle_0|Type_1	30,31	85645747,85654535	psi1:0.666666666667,psi2:0.555555555556	C1_8,C2_5	C1_4,C2_4	Yes
ENSG00000103194	USP10	chr16:84733689-84767069	+	ES	53	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,53,29	84733717,84766659,84766711,84767041	Yes	No	No	bcc_23747|Cycle_0|Type_1	28,29	84733717,84767041	psi1:0.153846153846,psi2:0	C1_6,C2_0	C1_33,C2_3	Yes
ENSG00000133816	MICAL2	chr11:12183935-12229600	+	ES	208	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,208,31	12183966,12225797,12226004,12229570	No	No	No	bcc_19736|Cycle_1|Type_1	31,31	12183966,12229570	psi1:0.942857142857,psi2:1.0	C1_66,C2_19	C1_4,C2_0	Yes
ENSG00000155330	C16orf87	chr16:46836953-46858327	-	ES	183	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,183,30	46836982,46843515,46843697,46858298	No	No	No	bcc_33013|Cycle_0|Type_1	29,30	46836982,46858298	psi1:0.857142857143,psi2:0.75	C1_6,C2_15	C1_1,C2_5	Yes
ENSG00000054267	ARID4B	chr1:235359400-235383137	-	ES	258	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,258,30	235359430,235377084,235377341,235383108	No	No	No	bcc_16631|Cycle_0|Type_1	30,30	235359430,235383108	psi1:0.895833333333,psi2:1.0	C1_43,C2_6	C1_5,C2_0	Yes
ENSG00000145912	NHP2	chr5:177576809-177580520	-	ES	106	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,106,29	177576839,177577889,177577994,177580492	No	No	No	bcc_56434|Cycle_0|Type_1	30,29	177576839,177580492	psi1:0.961538461538,psi2:0.993788819876	C1_125,C2_160	C1_5,C2_1	Yes
ENSG00000114956	DGUOK	chr2:74154148-74185303	+	ES_MULTI	565	Yes	Yes	protein_coding	all_splice_sites_known_(10_ss)	31,113,188,148,116,31	74154179,74166037,74166149,74173846,74174033,74177712,74177859,74184252,74184367,74185273	No	Yes	No	bcc_58675|Cycle_23|Type_1	31,31	74154179,74185273	psi1:0.939130434783,psi2:0.98275862069	C1_108,C2_114	C1_7,C2_2	Yes
ENSG00000136463	TACO1	chr17:61678691-61681924	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):61678722,61681894	31,31	61678722,61681894	No	No	No	bcc_63456|Cycle_0|Type_1	31,28	61678722,61681897	psi1:1.0,psi2:0.938775510204	C1_12,C2_46	C1_0,C2_3	Yes
ENSG00000079819	EPB41L2	chr6:131186745-131206266	-	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,123,31	131186774,131188599,131188721,131206236	No	Yes	No	bcc_46240|Cycle_1|Type_1	29,31	131186774,131206236	psi1:0.8625,psi2:1.0	C1_69,C2_7	C1_11,C2_0	Yes
ENSG00000111678	C12orf57	chr12:7053699-7054963	+	altD	87	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	116,30	7053815,7054934	No	No	No	bcc_63479|Cycle_0|Type_1	29,30	7053728,7054934	psi1:0.891666666667,psi2:0.951219512195	C1_107,C2_156	C1_13,C2_8	Yes
ENSG00000121964	GTDC1	chr2:144709610-144764779	-	ES_MULTI	326	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	30,71,145,110,31	144709640,144710340,144710410,144714762,144714906,144728220,144728329,144764749	No	No	No	bcc_53337|Cycle_0|Type_1	30,31	144709640,144764749	psi1:0.944444444444,psi2:1.0	C1_51,C2_15	C1_3,C2_0	Yes
ENSG00000071054	MAP4K4	chr2:102475513-102476227	+	altA	93	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,123	102475544,102476105	No	No	No	bcc_13168|Cycle_0|Type_1	31,30	102475544,102476198	psi1:0.617647058824,psi2:0.428571428571	C1_42,C2_3	C1_26,C2_4	Yes
ENSG00000040341,ENSG00000258677	STAU2,RP11-463D19.2	chr8:74601019-74659047	-	ES_MULTI	179	Yes	-	protein_coding,protein_coding	all_splice_sites_known_(6_ss)	29,66,113,30	74601048,74650519,74650584,74651991,74652103,74659018	No	Yes	No	bcc_19663|Cycle_4|Type_1	29,30	74601048,74659018	psi1:0.909090909091,psi2:1.0	C1_50,C2_8	C1_5,C2_0	Yes
ENSG00000105698	USF2	chr19:35760572-35761379	+	ES	201	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,201,30	35760602,35760706,35760906,35761350	No	No	No	bcc_21573|Cycle_0|Type_1	30,30	35760602,35761350	psi1:0.938775510204,psi2:0.981818181818	C1_46,C2_54	C1_3,C2_1	Yes
ENSG00000165006	UBAP1	chr9:34220915-34241212	+	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,125,30	34220946,34234214,34234338,34241183	No	Yes	No	bcc_56045|Cycle_1|Type_1	31,30	34220946,34241183	psi1:0.945945945946,psi2:1.0	C1_70,C2_21	C1_4,C2_0	Yes
ENSG00000182628	SKA2	chr17:57189676-57232522	-	ES_MULTI	264	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,177,87,31	57189706,57196680,57196856,57208642,57208728,57232492	No	Yes	No	bcc_27646|Cycle_5|Type_1	30,31	57189706,57232492	psi1:0.906976744186,psi2:0.971428571429	C1_78,C2_34	C1_8,C2_1	Yes
ENSG00000155659	VSIG4	chrX:65242224-65244875	-	altA	91	Yes	Yes	protein_coding	4_ss_annotated_(over_5_ss):65242704,65244867,65242683,65242342	118,22,9	65242342,65242683,65242704,65244867	No	No	No	bcc_51413|Cycle_0|Type_1	27,22,9	65242251,65242683,65242704,65244867	psi1:1.0,psi2:0.906976744186	C1_6,C2_39	C1_0,C2_4	Yes
ENSG00000157827	FMNL2	chr2:153501963-153504339	+	altD	47	Yes	Yes	protein_coding	1_ss_annotated_(over_3_ss):153504310	78,30	153502041,153504310	No	Yes	No	bcc_40062|Cycle_1|Type_1	31,30	153501994,153504310	psi1:0.833333333333,psi2:1.0	C1_25,C2_2	C1_5,C2_0	(GT:153501994,AG:153504310);(GC:153502041,AG:153504310)
ENSG00000143436	MRPL9	chr1:151733344-151734619	-	ES_altD	110	Yes	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,102,39	151733375,151733927,151734028,151734581	No	Yes	No	bcc_13597|Cycle_3|Type_1	31,31	151733375,151734589	psi1:1.0,psi2:0.975609756098	C1_41,C2_40	C1_0,C2_1	Yes
ENSG00000148925	BTBD10	chr11:13443354-13484669	-	ES	158	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,158,31	13443385,13466571,13466728,13484639	No	No	No	bcc_24868|Cycle_0|Type_1	31,31	13443385,13484639	psi1:0.810810810811,psi2:0.7	C1_30,C2_7	C1_7,C2_3	Yes
ENSG00000058262	SEC61A1	chr3:127779473-127783892	+	ES	62	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,62,29	127779504,127783720,127783781,127783864	No	No	No	bcc_43814|Cycle_0|Type_1	31,29	127779504,127783864	psi1:1.0,psi2:0.921875	C1_11,C2_59	C1_0,C2_5	Yes
ENSG00000076053,ENSG00000255663	RBM7,RP11-212D19.4	chr11:114271458-114276455	+	ES_MULTI	251	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(6_ss)	31,163,88,28	114271489,114272420,114272582,114273550,114273637,114276428	No	Yes	No	bcc_51949|Cycle_2|Type_1	31,28	114271489,114276428	psi1:0.963636363636,psi2:1.0	C1_53,C2_27	C1_2,C2_0	Yes
ENSG00000085415	SEH1L	chr18:12984158-12986888	+	altA	1622	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,1650	12984189,12985239	No	Yes	No	bcc_31322|Cycle_65|Type_1	31,28	12984189,12986861	psi1:0.968309859155,psi2:1.0	C1_275,C2_173	C1_9,C2_0	Yes
ENSG00000215301	DDX3X	chrX:41206234-41206596	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):41206265,41206565	31,32	41206265,41206565	No	No	No	bcc_29738|Cycle_0|Type_1	31,29	41206265,41206568	psi1:0.65625,psi2:0.769230769231	C1_42,C2_20	C1_22,C2_6	Yes
ENSG00000171735	CAMTA1	chr1:6845605-6885178	+	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,70,27	6845635,6880241,6880310,6885152	No	No	No	bcc_48739|Cycle_0|Type_1	30,27	6845635,6885152	psi1:0.9,psi2:0.822222222222	C1_81,C2_37	C1_9,C2_8	Yes
ENSG00000254870,ENSG00000198563	ATP6V1G2-DDX39B,DDX39B	chr6:31508282-31509757	-	altA	130	Yes	-	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	159,31	31508441,31509727	No	No	No	bcc_39749|Cycle_0|Type_1	29,31	31508311,31509727	psi1:0.75,psi2:0.645161290323	C1_15,C2_20	C1_5,C2_11	Yes
ENSG00000106263	EIF3B	chr7:2419115-2420079	+	altA	211	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):2419146,2419839	31,241	2419146,2419839	No	Yes	No	bcc_41965|Cycle_0|Type_1	31,30	2419146,2420050	psi1:0.894736842105,psi2:0.954954954955	C1_34,C2_106	C1_4,C2_5	Yes
ENSG00000145020	AMT	chr3:49454761-49455077	-	IR	257	Yes	Yes	protein_coding	no_known_ss	316	-	No	No	No	bcc_40853|Cycle_0|Type_1	29,30	49454790,49455048	psi1:1.0,psi2:0.95652173913	C1_17,C2_44	C1_0,C2_2	Yes
ENSG00000168389	MFSD2A	chr1:40421020-40422787	+	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	37,29	40421057,40422759	No	No	No	bcc_25772|Cycle_0|Type_1	31,29	40421051,40422759	psi1:1.0,psi2:0.875	C1_3,C2_28	C1_0,C2_4	Yes
ENSG00000146063	TRIM41	chr5:180661964-180662384	+	altD	84	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	115,31	180662079,180662354	No	Yes	No	bcc_52637|Cycle_1|Type_1	31,31	180661995,180662354	psi1:0.647058823529,psi2:0.538461538462	C1_11,C2_7	C1_6,C2_6	Yes
ENSG00000116871	MAP7D1	chr1:36639048-36641829	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,111,30	36639079,36640499,36640609,36641800	No	No	No	bcc_55337|Cycle_0|Type_1	31,30	36639079,36641800	psi1:0.934426229508,psi2:0.833333333333	C1_57,C2_5	C1_4,C2_1	Yes
ENSG00000115540	MOB4	chr2:198380839-198400281	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,28	198380870,198388348,198388410,198400254	No	No	No	bcc_38189|Cycle_0|Type_1	31,28	198380870,198400254	psi1:0.916666666667,psi2:1.0	C1_77,C2_13	C1_7,C2_0	Yes
ENSG00000164548	TRA2A	chr7:23561428-23561769	-	IR	280	Yes	-	protein_coding	no_known_ss	341	-	No	Yes	No	bcc_14513|Cycle_2|Type_1	31,30	23561459,23561740	psi1:0.91935483871,psi2:1.0	C1_57,C2_10	C1_5,C2_0	Yes
ENSG00000231389	HLA-DPA1	chr6:33033094-33036826	-	ES	167	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,167,31	33033124,33036415,33036581,33036796	No	Yes	Yes	bcc_57031|Cycle_7|Type_1	30,31	33033124,33036796	psi1:0.965517241379,psi2:1.0	C1_56,C2_30	C1_2,C2_0	Yes
ENSG00000132423	COQ3	chr6:99819432-99823894	-	altD	48	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):99823816,99819463	31,79	99819463,99823816	No	Yes	No	bcc_15225|Cycle_2|Type_1	31,31	99819463,99823864	psi1:0.945945945946,psi2:1.0	C1_35,C2_10	C1_2,C2_0	Yes
ENSG00000158869	FCER1G	chr1:161185129-161188059	+	ES	92	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,92,29	161185160,161187776,161187867,161188031	No	No	No	bcc_58716|Cycle_0|Type_1	31,29	161185160,161188031	psi1:0.933333333333,psi2:0.978494623656	C1_28,C2_91	C1_2,C2_2	Yes
ENSG00000115414	FN1	chr2:216244009-216246965	-	ES	270	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,270,31	216244040,216245534,216245803,216246935	No	No	No	bcc_27752|Cycle_0|Type_1	31,31	216244040,216246935	psi1:0.625,psi2:0.404255319149	C1_20,C2_190	C1_12,C2_280	Yes
ENSG00000092421	SEMA6A	chr5:115783477-115811250	-	ES_MULTI	216	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	30,165,51,21,10	115783507,115803279,115803443,115808581,115808631,115808769,115808789,115811241	No	Yes	No	bcc_42955|Cycle_1|Type_1	30,21,10	115783507,115808769,115808789,115811241	psi1:0.86301369863,psi2:1.0	C1_63,C2_6	C1_10,C2_0	Yes
ENSG00000167721	TSR1	chr17:2226608-2226977	-	IR	309	No	Yes	protein_coding	no_known_ss	369	-	No	No	No	bcc_27114|Cycle_0|Type_1	31,29	2226639,2226949	psi1:0.904761904762,psi2:0.960784313725	C1_57,C2_49	C1_6,C2_2	(AG:2226949,GT:2226639)
ENSG00000110321	EIF4G2	chr11:10822605-10823626	-	ES	114	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,114,31	10822634,10823208,10823321,10823596	No	No	No	bcc_6443|Cycle_0|Type_1	29,31	10822634,10823596	psi1:0.897435897436,psi2:0.822429906542	C1_245,C2_176	C1_28,C2_38	Yes
ENSG00000079819	EPB41L2	chr6:131186745-131206265	-	ES_MULTI	438	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,123,315,30	131186774,131188599,131188721,131190952,131191266,131206236	No	Yes	No	bcc_46240|Cycle_35|Type_1	29,30	131186774,131206236	psi1:0.912698412698,psi2:1.0	C1_115,C2_18	C1_11,C2_0	Yes
ENSG00000141002	TCF25	chr16:89960235-89961520	+	altA	45	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,75	89960266,89961446	No	No	No	bcc_36118|Cycle_0|Type_1	31,30	89960266,89961491	psi1:0.916666666667,psi2:0.846153846154	C1_33,C2_33	C1_3,C2_6	Yes
ENSG00000105701	FKBP8	chr19:18649216-18650211	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,31	18649246,18650181	No	No	No	bcc_22788|Cycle_0|Type_1	27,31	18649243,18650181	psi1:0.573964497041,psi2:0.694915254237	C1_97,C2_41	C1_72,C2_18	Yes
ENSG00000182827	ACBD3	chr1:226342503-226349256	-	ES	175	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,175,25	226342534,226346885,226347059,226349232	No	No	No	bcc_34257|Cycle_0|Type_1	31,25	226342534,226349232	psi1:0.976377952756,psi2:0.925925925926	C1_124,C2_25	C1_3,C2_2	Yes
ENSG00000185222	WBP5	chrX:102611503-102612570	+	ES	79	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,79,28	102611534,102612011,102612089,102612543	No	No	No	bcc_49074|Cycle_0|Type_1	31,28	102611534,102612543	psi1:0.924528301887,psi2:1.0	C1_49,C2_9	C1_4,C2_0	Yes
ENSG00000038002	AGA	chr4:178355605-178357481	-	altAD	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	38,52	178355643,178357430	No	No	No	bcc_48102|Cycle_0|Type_1	30,30	178355635,178357452	psi1:1.0,psi2:0.891891891892	C1_4,C2_33	C1_0,C2_4	Yes
ENSG00000196305	IARS	chr9:95048091-95050103	-	ES	83	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,83,31	95048121,95048818,95048900,95050073	No	No	No	bcc_42477|Cycle_0|Type_1	30,31	95048121,95050073	psi1:0.952380952381,psi2:1.0	C1_40,C2_13	C1_2,C2_0	Yes
ENSG00000109790	KLHL5	chr4:39098468-39109218	+	ES	225	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,225,30	39098498,39104907,39105131,39109189	No	No	No	bcc_47028|Cycle_0|Type_1	30,30	39098498,39109189	psi1:1.0,psi2:0.973913043478	C1_90,C2_112	C1_0,C2_3	Yes
ENSG00000069535	MAOB	chrX:43628636-43637959	-	ES	98	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,98,31	43628665,43634422,43634519,43637929	No	No	No	bcc_44149|Cycle_0|Type_1	29,31	43628665,43637929	psi1:0.957746478873,psi2:0.990476190476	C1_68,C2_104	C1_3,C2_1	Yes
ENSG00000135473	PAN2	chr12:56717668-56717863	-	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,43	56717697,56717821	No	No	No	bcc_55155|Cycle_0|Type_1	29,31	56717697,56717833	psi1:0.2,psi2:0.307692307692	C1_1,C2_4	C1_4,C2_9	Yes
ENSG00000135250	SRPK2	chr7:104758440-104766725	-	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,93,31	104758469,104766229,104766321,104766695	No	No	No	bcc_31286|Cycle_0|Type_1	29,31	104758469,104766695	psi1:0.282608695652,psi2:0.428571428571	C1_13,C2_3	C1_33,C2_4	Yes
ENSG00000135108	FBXO21	chr12:117595841-117603320	-	altA	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	48,31	117595889,117603290	No	No	No	bcc_10778|Cycle_0|Type_1	27,31	117595868,117603290	psi1:0.40350877193,psi2:0	C1_23,C2_0	C1_34,C2_1	Yes
ENSG00000197580	BCO2	chr11:112085553-112086973	+	altD	85	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	114,31	112085667,112086943	No	No	No	bcc_46363|Cycle_0|Type_1	29,31	112085582,112086943	psi1:1.0,psi2:0.928571428571	C1_5,C2_26	C1_0,C2_2	Yes
ENSG00000060237	WNK1	chr12:999645-1003757	+	altD	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,30	999679,1003728	No	No	No	bcc_37118|Cycle_0|Type_1	31,30	999676,1003728	psi1:0.916666666667,psi2:1.0	C1_44,C2_7	C1_4,C2_0	Yes
ENSG00000086232	EIF2AK1	chr7:6082592-6084223	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):6082624,6084193	32,31	6082624,6084193	No	No	No	bcc_40768|Cycle_0|Type_1	29,31	6082621,6084193	psi1:0.92,psi2:0.851851851852	C1_23,C2_23	C1_2,C2_4	Yes
ENSG00000106263	EIF3B	chr7:2419116-2420079	+	altA	136	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):2419146,2419914	30,166	2419146,2419914	No	Yes	No	bcc_41965|Cycle_1|Type_1	30,30	2419146,2420050	psi1:0.888888888889,psi2:0.951923076923	C1_24,C2_99	C1_3,C2_5	Yes
ENSG00000125835	SNRPB	chr20:2442410-2443311	-	altA	146	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	175,30	2442585,2443282	No	No	No	bcc_9095|Cycle_0|Type_1	29,30	2442439,2443282	psi1:0.966666666667,psi2:0.901234567901	C1_29,C2_73	C1_1,C2_8	Yes
ENSG00000196470	SIAH1	chr16:48395639-48395794	+	IR	94	Yes	Yes	protein_coding	no_known_ss	155	-	No	No	No	bcc_11446|Cycle_0|Type_1	31,30	48395670,48395765	psi1:0.852941176471,psi2:0.92	C1_29,C2_46	C1_5,C2_4	Yes
ENSG00000151923	TIAL1	chr10:121342040-121347692	-	altA	51	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	80,29	121342120,121347664	No	No	No	bcc_29750|Cycle_0|Type_1	29,29	121342069,121347664	psi1:0.5,psi2:0.391304347826	C1_7,C2_9	C1_7,C2_14	Yes
ENSG00000113312	TTC1	chr5:159436166-159437537	+	altD	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	34,31	159436200,159437507	No	No	No	bcc_42622|Cycle_0|Type_1	31,31	159436197,159437507	psi1:0.847457627119,psi2:1.0	C1_50,C2_4	C1_9,C2_0	Yes
ENSG00000085788	DDHD2	chr8:38103438-38105259	+	ES	68	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,68,29	38103468,38103751,38103818,38105231	No	No	No	bcc_44252|Cycle_0|Type_1	30,29	38103468,38105231	psi1:0.934782608696,psi2:1.0	C1_43,C2_9	C1_3,C2_0	Yes
ENSG00000132463	GRSF1	chr4:71693723-71698054	-	ES	136	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,136,31	71693753,71697256,71697391,71698024	No	No	No	bcc_34774|Cycle_0|Type_1	30,31	71693753,71698024	psi1:0.968992248062,psi2:1.0	C1_125,C2_71	C1_4,C2_0	Yes
ENSG00000102181	CD99L2	chrX:149963928-149999732	-	ES_MULTI	147	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,75,72,29	149963959,149983335,149983409,149984480,149984551,149999704	No	No	No	bcc_53604|Cycle_0|Type_1	31,29	149963959,149999704	psi1:0.927710843373,psi2:0.983333333333	C1_154,C2_59	C1_12,C2_1	Yes
ENSG00000130723	PRRC2B	chr9:134334712-134340181	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):134340150,134334743	31,32	134334743,134340150	No	No	No	bcc_55150|Cycle_0|Type_1	31,29	134334743,134340153	psi1:0.894736842105,psi2:1.0	C1_17,C2_2	C1_2,C2_0	Yes
ENSG00000182902	SLC25A18	chr22:18062701-18063268	+	IR	509	Yes	-	protein_coding	no_known_ss	567	-	No	Yes	Yes	bcc_52201|Cycle_6|Type_1	29,29	18062730,18063240	psi1:1.0,psi2:0.935483870968	C1_12,C2_58	C1_0,C2_4	Yes
ENSG00000205981	DNAJC19	chr3:180703753-180705841	-	ES	80	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,80,31	180703784,180704731,180704810,180705811	No	Yes	No	bcc_18052|Cycle_1|Type_1	31,31	180703784,180705811	psi1:0.761904761905,psi2:0.846153846154	C1_48,C2_88	C1_15,C2_16	Yes
ENSG00000182944	EWSR1	chr22:29692328-29694752	+	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,123,30	29692358,29693817,29693939,29694723	No	No	No	bcc_31872|Cycle_0|Type_1	30,30	29692358,29694723	psi1:0.935064935065,psi2:0.980392156863	C1_72,C2_50	C1_5,C2_1	Yes
ENSG00000130731	C16orf13	chr16:684767-685311	-	ES	68	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,68,31	684797,684889,684956,685281	No	Yes	No	bcc_62804|Cycle_1|Type_1	30,31	684797,685281	psi1:0.645161290323,psi2:0.741935483871	C1_20,C2_23	C1_11,C2_8	Yes
ENSG00000107745	MICU1	chr10:74267998-74293533	-	ES	6	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,6,30	74268027,74288511,74288516,74293504	No	Yes	No	bcc_10031|Cycle_1|Type_1	29,30	74268027,74293504	psi1:0.396551724138,psi2:0	C1_23,C2_0	C1_35,C2_1	Yes
ENSG00000231312	AC007246.3	chr2:39743651-39826536	+	ES	128	Yes	-	antisense	all_splice_sites_known_(4_ss)	31,128,31	39743682,39745724,39745851,39826506	No	No	No	bcc_2303|Cycle_0|Type_1	31,31	39743682,39826506	psi1:0.857142857143,psi2:1.0	C1_24,C2_2	C1_4,C2_0	Yes
ENSG00000166770	ZNF667-AS1	chr19:56989614-57005560	+	altD	105	No	-	lincRNA	all_splice_sites_known_(3_ss)	136,29	56989750,57005532	No	No	No	bcc_15620|Cycle_0|Type_1	31,29	56989645,57005532	psi1:0.916666666667,psi2:1.0	C1_33,C2_5	C1_3,C2_0	Yes
ENSG00000272369	RP11-446N19.1	chr12:46781725-47046201	+	ES	130	Yes	-	lincRNA	all_splice_sites_known_(4_ss)	30,130,29	46781755,46848795,46848924,47046173	No	Yes	No	bcc_64641|Cycle_3|Type_1	30,29	46781755,47046173	psi1:0.5,psi2:0.7	C1_1,C2_21	C1_1,C2_9	Yes
ENSG00000111269	CREBL2	chr12:12788877-12794958	+	ES	145	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,145,31	12788908,12790504,12790648,12794928	No	No	No	bcc_39691|Cycle_0|Type_1	31,31	12788908,12794928	psi1:0.967479674797,psi2:1.0	C1_119,C2_60	C1_4,C2_0	Yes
ENSG00000143384	MCL1	chr1:150549937-150551348	-	ES	248	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,248,30	150549967,150550720,150550967,150551319	No	No	No	bcc_36305|Cycle_2|Type_1	30,30	150549967,150551319	psi1:1.0,psi2:0.9765625	C1_107,C2_125	C1_0,C2_3	Yes
ENSG00000136754	ABI1	chr10:27048136-27054176	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,30	27048167,27054147	No	Yes	No	bcc_35435|Cycle_3|Type_1	28,30	27048164,27054147	psi1:0.636363636364,psi2:0.733333333333	C1_7,C2_11	C1_4,C2_4	Yes
ENSG00000116455	WDR77	chr1:111983981-111984677	-	ES	106	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,106,31	111984011,111984121,111984226,111984647	No	No	No	bcc_40735|Cycle_0|Type_1	30,31	111984011,111984647	psi1:0.333333333333,psi2:0.516129032258	C1_1,C2_16	C1_2,C2_15	Yes
ENSG00000155666	KDM8	chr16:27230338-27231743	+	altD	64	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	93,30	27230431,27231714	No	No	No	bcc_28306|Cycle_0|Type_1	29,30	27230367,27231714	psi1:1.0,psi2:0.888888888889	C1_6,C2_56	C1_0,C2_7	Yes
ENSG00000023287	RB1CC1	chr8:53536258-53537307	-	altA	132	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	161,31	53536419,53537277	No	No	No	bcc_32944|Cycle_0|Type_1	29,31	53536287,53537277	psi1:0.931818181818,psi2:1.0	C1_123,C2_23	C1_9,C2_0	Yes
ENSG00000125814	NAPB	chr20:23356115-23356175	+	deletion	3	No	-	protein_coding	no_known_ss	60	23356115	No	No	No	bcc_38026|Cycle_0|Type_1	26,31	23356141,23356145	psi1:0.559829059829,psi2:0.3	C1_131,C2_3	C1_103,C2_7	-
ENSG00000101844	ATG4A	chrX:107395057-107396900	+	ES	109	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,109,29	107395088,107396209,107396317,107396872	No	No	No	bcc_8465|Cycle_0|Type_1	31,29	107395088,107396872	psi1:1.0,psi2:0.896551724138	C1_3,C2_26	C1_0,C2_3	Yes
ENSG00000115414	FN1	chr2:216236709-216238075	-	ES	192	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,192,31	216236738,216236832,216237023,216238045	No	Yes	No	bcc_27754|Cycle_2|Type_1	29,31	216236738,216238045	psi1:0.783333333333,psi2:0.919866444073	C1_47,C2_1102	C1_13,C2_96	Yes
ENSG00000065809	FAM107B	chr10:14572483-14613953	-	ES_altD	227	Yes	-	protein_coding	all_splice_sites_known_(5_ss)	31,66,192	14572514,14595321,14595386,14613762	No	Yes	No	bcc_33718|Cycle_1|Type_1	31,31	14572514,14613923	psi1:0.920634920635,psi2:1.0	C1_58,C2_9	C1_5,C2_0	Yes
ENSG00000168765	GSTM4	chr1:110199870-110200423	+	ES	82	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,82,30	110199901,110200212,110200293,110200394	No	Yes	Yes	bcc_59354|Cycle_1|Type_1	31,30	110199901,110200394	psi1:0.908256880734,psi2:1.0	C1_99,C2_13	C1_10,C2_0	Yes
ENSG00000136527	TRA2B	chr3:185643384-185655642	-	ES	134	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,134,30	185643414,185644389,185644522,185655613	No	No	No	bcc_26430|Cycle_0|Type_1	30,30	185643414,185655613	psi1:0.942307692308,psi2:0.981481481481	C1_49,C2_53	C1_3,C2_1	Yes
ENSG00000116005	PCYOX1	chr2:70486668-70502120	+	ES	175	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,175,30	70486698,70488344,70488518,70502091	No	No	No	bcc_17070|Cycle_0|Type_1	30,30	70486698,70502091	psi1:0.972602739726,psi2:1.0	C1_71,C2_44	C1_2,C2_0	Yes
ENSG00000165516	KLHDC2	chr14:50246363-50246496	+	IR	72	No	Yes	protein_coding	no_known_ss	133	-	No	No	No	bcc_16448|Cycle_0|Type_1	30,31	50246393,50246466	psi1:0.155844155844,psi2:0.0851063829787	C1_12,C2_4	C1_65,C2_43	Yes
ENSG00000165006	UBAP1	chr9:34179208-34234243	+	ES	41	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,41,30	34179238,34220906,34220946,34234214	No	Yes	No	bcc_56045|Cycle_0|Type_1	30,30	34179238,34234214	psi1:0.860465116279,psi2:1.0	C1_37,C2_3	C1_6,C2_0	Yes
ENSG00000148481	FAM188A	chr10:15879286-15883455	-	ES	52	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,52,31	15879317,15880227,15880278,15883425	No	Yes	No	bcc_49511|Cycle_2|Type_1	31,31	15879317,15883425	psi1:0.857142857143,psi2:0.777777777778	C1_12,C2_7	C1_2,C2_2	Yes
ENSG00000102103	PQBP1	chrX:48755268-48755804	+	altD	79	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	108,30	48755376,48755775	No	Yes	No	bcc_55570|Cycle_0|Type_1	29,30	48755297,48755775	psi1:0.833333333333,psi2:0.904761904762	C1_25,C2_19	C1_5,C2_2	Yes
ENSG00000068438	FTSJ1	chrX:48341151-48341402	+	IR	191	Yes	Yes	protein_coding	no_known_ss	251	-	No	No	No	bcc_63961|Cycle_0|Type_1	31,29	48341182,48341374	psi1:0.5,psi2:0.625	C1_4,C2_20	C1_4,C2_12	Yes
ENSG00000168906	MAT2A	chr2:85769466-85769714	+	IR	191	Yes	Yes	protein_coding	no_known_ss	248	-	No	No	No	bcc_24586|Cycle_0|Type_1	30,27	85769496,85769688	psi1:0.416666666667,psi2:0.52	C1_30,C2_26	C1_42,C2_24	Yes
ENSG00000135447	PPP1R1A	chr12:54974803-54976545	-	ES	156	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,156,30	54974834,54975760,54975915,54976516	No	Yes	No	bcc_6806|Cycle_2|Type_1	31,30	54974834,54976516	psi1:0.983606557377,psi2:0.920668058455	C1_120,C2_441	C1_2,C2_38	Yes
ENSG00000117151	CTBS	chr1:85031666-85036294	-	ES	209	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,209,30	85031695,85035614,85035822,85036265	No	No	No	bcc_11914|Cycle_1|Type_1	29,30	85031695,85036265	psi1:0.933333333333,psi2:0.819047619048	C1_14,C2_86	C1_1,C2_19	Yes
ENSG00000081041	CXCL2	chr4:74963457-74964348	+	IR	829	Yes	Yes	protein_coding	no_known_ss	891	-	No	Yes	No	bcc_17531|Cycle_0|Type_1	31,31	74963488,74964318	psi1:1.0,psi2:0.529585798817	C1_4,C2_179	C1_0,C2_159	(CT:74963488,AC:74964318)
ENSG00000111906	HDDC2	chr6:125621774-125623209	-	altD	184	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):125622995,125621805	31,215	125621805,125622995	No	No	No	bcc_55399|Cycle_0|Type_1	31,31	125621805,125623179	psi1:0.728571428571,psi2:1.0	C1_102,C2_4	C1_38,C2_0	Yes
ENSG00000163584	RPL22L1	chr3:170585892-170586116	-	altA	67	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	98,30	170585990,170586087	No	No	No	bcc_55952|Cycle_0|Type_1	31,30	170585923,170586087	psi1:0.5,psi2:0.363636363636	C1_6,C2_24	C1_6,C2_42	Yes
ENSG00000102471	NDFIP2	chr13:80113880-80122493	+	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,125,31	80113910,80117693,80117817,80122463	No	No	No	bcc_8844|Cycle_0|Type_1	30,31	80113910,80122463	psi1:0.965034965035,psi2:1.0	C1_138,C2_57	C1_5,C2_0	Yes
ENSG00000058799	YIPF1	chr1:54348905-54354610	-	altA	15	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):54354580,54348949	44,31	54348949,54354580	No	No	No	bcc_50691|Cycle_0|Type_1	29,31	54348934,54354580	psi1:1.0,psi2:0.925925925926	C1_4,C2_25	C1_0,C2_2	Yes
ENSG00000033011	ALG1	chr16:5129778-5132588	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,111,29	5129808,5130947,5131057,5132560	No	No	No	bcc_28902|Cycle_0|Type_1	30,29	5129808,5132560	psi1:1.0,psi2:0.925925925926	C1_4,C2_25	C1_0,C2_2	Yes
ENSG00000113328	CCNG1	chr5:162869118-162870709	+	ES	195	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,195,30	162869149,162869380,162869574,162870680	No	No	No	bcc_29862|Cycle_2|Type_1	31,30	162869149,162870680	psi1:1.0,psi2:0.972222222222	C1_61,C2_105	C1_0,C2_3	Yes
ENSG00000196914	ARHGEF12	chr11:120300195-120302507	+	ES	120	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,120,28	120300226,120300421,120300540,120302480	No	No	No	bcc_11343|Cycle_0|Type_1	31,28	120300226,120302480	psi1:0.857142857143,psi2:0.769230769231	C1_36,C2_10	C1_6,C2_3	Yes
ENSG00000106772	PRUNE2	chr9:79253175-79259683	-	ES	9	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,9,29	79253204,79256888,79256896,79259655	No	No	No	bcc_41012|Cycle_0|Type_1	29,29	79253204,79259655	psi1:0.326086956522,psi2:0	C1_15,C2_0	C1_31,C2_1	Yes
ENSG00000118785	SPP1	chr4:88901248-88902655	+	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,42,29	88901278,88901545,88901586,88902627	No	No	No	bcc_43507|Cycle_0|Type_1	30,29	88901278,88902627	psi1:0.90520694259,psi2:0.763157894737	C1_678,C2_29	C1_71,C2_9	Yes
ENSG00000110619	CARS	chr11:3022449-3023229	-	altD	8	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,38	3022478,3023192	No	No	No	bcc_54236|Cycle_0|Type_1	29,30	3022478,3023200	psi1:0.529411764706,psi2:0.423076923077	C1_27,C2_11	C1_24,C2_15	Yes
ENSG00000108848	LUC7L3	chr17:48827972-48828113	+	IR	82	Yes	Yes	protein_coding	no_known_ss	141	-	No	Yes	No	bcc_31020|Cycle_4|Type_1	30,29	48828002,48828085	psi1:0.938461538462,psi2:1.0	C1_61,C2_12	C1_4,C2_0	Yes
ENSG00000204463	BAG6	chr6:31611721-31611889	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	31611754,31611859	No	No	No	bcc_59261|Cycle_0|Type_1	30,31	31611751,31611859	psi1:0.666666666667,psi2:0.545454545455	C1_2,C2_6	C1_1,C2_5	Yes
ENSG00000060237	WNK1	chr12:971405-987410	+	ES_altA	87	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,84,33	971436,980431,980514,987378	No	Yes	No	bcc_37125|Cycle_3|Type_1	31,30	971436,987381	psi1:0.727272727273,psi2:0.833333333333	C1_16,C2_5	C1_6,C2_1	Yes
ENSG00000153827	TRIP12	chr2:230670568-230672453	-	altD	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):230672424,230670599	31,33	230670599,230672421	No	Yes	No	bcc_16468|Cycle_0|Type_1	31,30	230670599,230672424	psi1:0.25,psi2:0.166666666667	C1_2,C2_1	C1_6,C2_5	Yes
ENSG00000090097	PCBP4	chr3:51992138-51992836	-	altA	197	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	227,31	51992365,51992806	No	No	No	bcc_66076|Cycle_0|Type_1	30,31	51992168,51992806	psi1:0.911764705882,psi2:1.0	C1_31,C2_4	C1_3,C2_0	Yes
ENSG00000141030	COPS3	chr17:17158231-17165310	-	ES	174	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,174,31	17158259,17163615,17163788,17165280	No	No	No	bcc_54885|Cycle_0|Type_1	28,31	17158259,17165280	psi1:0.952054794521,psi2:0.989130434783	C1_139,C2_91	C1_7,C2_1	Yes
ENSG00000160194	NDUFV3	chr21:44313461-44329004	+	ES	121	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,121,31	44313491,44317037,44317157,44328974	No	Yes	No	bcc_22826|Cycle_0|Type_1	30,31	44313491,44328974	psi1:1.0,psi2:0.967741935484	C1_54,C2_120	C1_0,C2_4	Yes
ENSG00000245573	BDNF-AS	chr11:27661522-27680747	+	ES	222	No	-	antisense	all_splice_sites_known_(4_ss)	30,222,30	27661552,27679788,27680009,27680718	No	Yes	No	bcc_70028|Cycle_0|Type_1	30,30	27661552,27680718	psi1:0.916666666667,psi2:1.0	C1_22,C2_3	C1_2,C2_0	Yes
ENSG00000155903	RASA2	chr3:141305564-141326550	+	altD	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	141305597,141326520	No	No	No	bcc_63788|Cycle_1|Type_1	30,31	141305594,141326520	psi1:0.5,psi2:0.4	C1_2,C2_2	C1_2,C2_3	Yes
ENSG00000215695	RSC1A1	chr1:15988103-15988168	+	deletion	3	No	Yes	protein_coding	no_known_ss	65	15988103	No	No	No	bcc_46254|Cycle_0|Type_1	31,31	15988134,15988138	psi1:1.0,psi2:0.9	C1_2,C2_18	C1_0,C2_2	-
ENSG00000136754	ABI1	chr10:27040681-27054175	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,87,29	27040712,27044584,27044670,27054147	No	Yes	No	bcc_35435|Cycle_10|Type_1	31,29	27040712,27054147	psi1:0.9,psi2:1.0	C1_18,C2_2	C1_2,C2_0	Yes
ENSG00000151150	ANK3	chr10:61802485-61815446	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):61815416,61802517	32,31	61802517,61815416	No	No	No	bcc_17099|Cycle_0|Type_1	29,31	61802514,61815416	psi1:0.8,psi2:1.0	C1_76,C2_4	C1_19,C2_0	Yes
ENSG00000188976	NOC2L	chr1:880151-880467	-	altD	15	No	-	protein_coding	all_splice_sites_known_(3_ss)	29,46	880180,880422	No	No	No	bcc_54959|Cycle_0|Type_1	29,31	880180,880437	psi1:0.354838709677,psi2:0.461538461538	C1_11,C2_6	C1_20,C2_7	Yes
ENSG00000183474	GTF2H2C	chr5:68862849-68868300	+	ES_MULTI	106	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,51,55,29	68862880,68863554,68863604,68863980,68864034,68868272	Yes	No	No	bcc_24679|Cycle_0|Type_1	31,29	68862880,68868272	psi1:0.972972972973,psi2:0.931034482759	C1_36,C2_27	C1_1,C2_2	Yes
ENSG00000071054	MAP4K4	chr2:102503668-102504270	+	altD	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	55,31	102503723,102504240	No	No	No	bcc_13173|Cycle_0|Type_1	31,31	102503699,102504240	psi1:0.119658119658,psi2:0.214285714286	C1_28,C2_9	C1_206,C2_33	Yes
ENSG00000115414	FN1	chr2:216236711-216238075	-	altA	285	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	312,31	216237023,216238045	No	Yes	No	bcc_27754|Cycle_4|Type_1	27,31	216236738,216238045	psi1:0.75,psi2:0.887961859356	C1_39,C2_745	C1_13,C2_94	Yes
ENSG00000105393	BABAM1	chr19:17378305-17379631	+	altA	38	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,67	17378336,17379565	No	No	No	bcc_15359|Cycle_0|Type_1	31,29	17378336,17379603	psi1:0.318181818182,psi2:0.428571428571	C1_7,C2_3	C1_15,C2_4	Yes
ENSG00000135241	PNPLA8	chr7:108119792-108131874	-	unclassified	186	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,195,21	108119823,108128203,108128397,108131854	No	No	No	bcc_36071|Cycle_1|Type_1	31,9,21	108119823,108128389,108128397,108131854	psi1:0.974025974026,psi2:1.0	C1_75,C2_46	C1_2,C2_0	Yes
ENSG00000213995	CARKD	chr13:111286912-111287048	-	IR	76	Yes	Yes	protein_coding	no_known_ss	136	-	No	No	No	bcc_54008|Cycle_0|Type_1	30,30	111286942,111287019	psi1:0.448275862069,psi2:0.333333333333	C1_13,C2_3	C1_16,C2_6	(AG:111287019,GT:111286942)
ENSG00000108587	GOSR1	chr17:28808244-28811260	+	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	37,29	28808281,28811232	No	No	No	bcc_58499|Cycle_0|Type_1	31,29	28808275,28811232	psi1:0.636363636364,psi2:0.538461538462	C1_7,C2_7	C1_4,C2_6	Yes
ENSG00000164403	SHROOM1	chr5:132159425-132160001	-	altD	431	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,460	132159456,132159542	No	No	No	bcc_21109|Cycle_0|Type_1	31,29	132159456,132159973	psi1:0.95652173913,psi2:0.988888888889	C1_22,C2_89	C1_1,C2_1	Yes
ENSG00000205531	NAP1L4	chr11:2966847-2972519	-	ES	38	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,38,31	2966876,2970457,2970494,2972489	No	No	No	bcc_31590|Cycle_0|Type_1	29,31	2966876,2972489	psi1:0.422222222222,psi2:0.3125	C1_19,C2_5	C1_26,C2_11	Yes
ENSG00000084764	MAPRE3	chr2:27247089-27248478	+	altD	45	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	76,28	27247165,27248451	No	No	No	bcc_46327|Cycle_0|Type_1	31,28	27247120,27248451	psi1:0.877419354839,psi2:0.714285714286	C1_136,C2_5	C1_19,C2_2	Yes
ENSG00000066455	GOLGA5	chr14:93301978-93305740	+	ES	64	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,64,30	93302009,93303731,93303794,93305711	No	No	No	bcc_40145|Cycle_0|Type_1	31,30	93302009,93305711	psi1:1.0,psi2:0.964912280702	C1_42,C2_110	C1_0,C2_4	Yes
ENSG00000138434	SSFA2	chr2:182787108-182794316	+	ES	118	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,118,29	182787139,182792888,182793005,182794288	No	Yes	Yes	bcc_39375|Cycle_1|Type_1	31,29	182787139,182794288	psi1:0.946808510638,psi2:0.893617021277	C1_89,C2_42	C1_5,C2_5	Yes
ENSG00000100116	GCAT	chr22:38204140-38206062	+	altA	78	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,107	38204170,38205956	No	No	No	bcc_69121|Cycle_0|Type_1	30,29	38204170,38206034	psi1:0.571428571429,psi2:0.666666666667	C1_4,C2_4	C1_3,C2_2	Yes
ENSG00000143442	POGZ	chr1:151403287-151414587	-	ES	159	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,159,31	151403317,151413404,151413562,151414557	No	No	No	bcc_65750|Cycle_0|Type_1	30,31	151403317,151414557	psi1:0.866666666667,psi2:1.0	C1_13,C2_1	C1_2,C2_0	Yes
ENSG00000013364	MVP	chr16:29831800-29841866	+	altA	41	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,72	29831831,29841795	No	No	No	bcc_57561|Cycle_0|Type_1	31,31	29831831,29841836	psi1:0.230769230769,psi2:0.153846153846	C1_3,C2_2	C1_10,C2_11	Yes
ENSG00000038002	AGA	chr4:178352932-178354397	-	altAD	7	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):178354368,178352962	36,31	178352968,178354367	No	No	No	bcc_48103|Cycle_0|Type_1	30,30	178352962,178354368	psi1:0,psi2:0.0666666666667	C1_0,C2_3	C1_7,C2_42	(TA:178354367,CC:178352968);(AC:178354368,CT:178352962)
ENSG00000159322	ADPGK	chr15:73045205-73047927	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	73045236,73047897	No	No	No	bcc_45940|Cycle_0|Type_1	28,31	73045233,73047897	psi1:0.4,psi2:0.5	C1_4,C2_3	C1_6,C2_3	Yes
ENSG00000163291	PAQR3	chr4:79836411-79836516	+	deletion	47	Yes	-	protein_coding	no_known_ss	105	79836411	No	No	No	bcc_32177|Cycle_0|Type_1	27,31	79836438,79836486	psi1:0.846153846154,psi2:0.769230769231	C1_11,C2_10	C1_2,C2_3	-
ENSG00000164494	PDSS2	chr6:107531746-107566782	-	ES	174	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,174,31	107531774,107533313,107533486,107566752	No	No	No	bcc_59659|Cycle_0|Type_1	28,31	107531774,107566752	psi1:1.0,psi2:0.935483870968	C1_5,C2_29	C1_0,C2_2	Yes
ENSG00000120688	WBP4	chr13:41646962-41654810	+	ES	194	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,194,29	41646993,41650180,41650373,41654782	No	No	No	bcc_40286|Cycle_0|Type_1	31,29	41646993,41654782	psi1:0.967741935484,psi2:1.0	C1_60,C2_25	C1_2,C2_0	Yes
ENSG00000062598	ELMO2	chr20:45021752-45022718	-	ES	73	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,73,31	45021782,45022168,45022240,45022688	No	No	No	bcc_57172|Cycle_0|Type_1	30,31	45021782,45022688	psi1:0.829268292683,psi2:1.0	C1_34,C2_2	C1_7,C2_0	Yes
ENSG00000188554	NBR1	chr17:41348577-41352214	+	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,165,31	41348608,41348959,41349123,41352184	No	No	No	bcc_23070|Cycle_2|Type_1	31,31	41348608,41352184	psi1:0.950704225352,psi2:1.0	C1_135,C2_32	C1_7,C2_0	Yes
ENSG00000111906	HDDC2	chr6:125598355-125614016	-	altD	13	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):125598386,125613987	31,43	125598386,125613974	No	No	No	bcc_55401|Cycle_0|Type_1	31,30	125598386,125613987	psi1:0.0860927152318,psi2:0	C1_13,C2_0	C1_138,C2_17	Yes
ENSG00000170088	TMEM192	chr4:166006810-166021810	-	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,135,31	166006840,166009620,166009754,166021780	No	No	No	bcc_12936|Cycle_0|Type_1	30,31	166006840,166021780	psi1:1.0,psi2:0.966101694915	C1_22,C2_57	C1_0,C2_2	Yes
ENSG00000105854	PON2	chr7:95041025-95041653	-	altA	36	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	66,30	95041091,95041624	No	No	No	bcc_41717|Cycle_0|Type_1	30,30	95041055,95041624	psi1:0.885245901639,psi2:0.941605839416	C1_162,C2_129	C1_21,C2_8	Yes
ENSG00000164985	PSIP1	chr9:15471278-15472660	-	altA	1237	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):15471309,15472630	1268,31	15472546,15472630	No	Yes	No	bcc_9325|Cycle_9|Type_1	31,31	15471309,15472630	psi1:0.77545691906,psi2:1.0	C1_297,C2_13	C1_86,C2_0	Yes
ENSG00000134184	GSTM1	chr1:110231328-110231876	+	ES	82	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,82,30	110231359,110231670,110231751,110231847	No	Yes	No	bcc_59354|Cycle_4|Type_1	31,30	110231359,110231847	psi1:0.927536231884,psi2:1.0	C1_128,C2_19	C1_10,C2_0	Yes
ENSG00000036257	CUL3	chr2:225400328-225449691	-	ES	198	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,198,31	225400358,225422376,225422573,225449661	No	Yes	No	bcc_50374|Cycle_1|Type_1	30,31	225400358,225449661	psi1:0.979166666667,psi2:0.941176470588	C1_94,C2_32	C1_2,C2_2	Yes
ENSG00000069275	NUCKS1	chr1:205688770-205689658	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):205688804,205689629	34,30	205688804,205689629	No	No	No	bcc_17209|Cycle_0|Type_1	31,30	205688801,205689629	psi1:0.826203208556,psi2:0.913978494624	C1_309,C2_85	C1_65,C2_8	Yes
ENSG00000174628	IQCK	chr16:19745118-19775200	+	ES	98	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,98,31	19745149,19746675,19746772,19775170	No	No	No	bcc_54256|Cycle_0|Type_1	31,31	19745149,19775170	psi1:0.842105263158,psi2:1.0	C1_16,C2_1	C1_3,C2_0	Yes
ENSG00000111676	ATN1	chr12:7043710-7044741	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):7043741,7044710	31,32	7043741,7044710	No	No	No	bcc_15972|Cycle_0|Type_1	31,29	7043741,7044713	psi1:0.842105263158,psi2:1.0	C1_64,C2_4	C1_12,C2_0	Yes
ENSG00000176101	SSNA1	chr9:140083572-140084287	+	altD	114	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	145,29	140083717,140084259	No	No	No	bcc_73322|Cycle_0|Type_1	31,29	140083603,140084259	psi1:0.973333333333,psi2:1.0	C1_73,C2_39	C1_2,C2_0	Yes
ENSG00000132676	DAP3	chr1:155679584-155691337	+	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,123,30	155679615,155686797,155686919,155691308	No	Yes	No	bcc_19045|Cycle_1|Type_1	31,30	155679615,155691308	psi1:1.0,psi2:0.959459459459	C1_21,C2_71	C1_0,C2_3	Yes
ENSG00000139116	KIF21A	chr12:39735898-39745609	-	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,39,31	39735926,39740268,39740306,39745579	No	No	No	bcc_28653|Cycle_0|Type_1	28,31	39735926,39745579	psi1:0.295454545455,psi2:0	C1_13,C2_0	C1_31,C2_1	Yes
ENSG00000155465	SLC7A7	chr14:23248115-23282138	-	ES	126	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,126,30	23248146,23249135,23249260,23282109	No	No	No	bcc_67498|Cycle_0|Type_1	31,30	23248146,23282109	psi1:1.0,psi2:0.92	C1_3,C2_23	C1_0,C2_2	Yes
ENSG00000115841	RMDN2	chr2:38224626-38231306	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,28	38224657,38231134,38231187,38231279	No	No	No	bcc_49114|Cycle_0|Type_1	31,28	38224657,38231279	psi1:1.0,psi2:0.884615384615	C1_2,C2_23	C1_0,C2_3	Yes
ENSG00000254999	BRK1	chr3:10157472-10167340	+	ES	65	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):10167310,10157503	31,65,31	10157503,10160590,10160654,10167310	No	No	No	bcc_11956|Cycle_0|Type_1	31,31	10157503,10167310	psi1:0.148148148148,psi2:0.0813953488372	C1_24,C2_7	C1_138,C2_79	Yes
ENSG00000118518	RNF146	chr6:127601454-127607225	+	ES	141	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,141,31	127601485,127606353,127606493,127607195	No	No	No	bcc_42897|Cycle_0|Type_1	31,31	127601485,127607195	psi1:0.581395348837,psi2:0.75	C1_25,C2_3	C1_18,C2_1	Yes
ENSG00000132716	DCAF8	chr1:160194309-160195411	-	ES	58	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,58,31	160194339,160194852,160194909,160195381	No	No	No	bcc_43387|Cycle_0|Type_1	30,31	160194339,160195381	psi1:0.945652173913,psi2:0.983606557377	C1_87,C2_60	C1_5,C2_1	Yes
ENSG00000155508	CNOT8	chr5:154244914-154251320	+	ES	162	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,162,31	154244945,154250221,154250382,154251290	No	No	No	bcc_47644|Cycle_0|Type_1	31,31	154244945,154251290	psi1:0.952380952381,psi2:1.0	C1_80,C2_19	C1_4,C2_0	Yes
ENSG00000139116	KIF21A	chr12:39705324-39713738	-	ES_MULTI	168	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,39,129,31	39705355,39709734,39709772,39711875,39712003,39713708	No	Yes	No	bcc_28641|Cycle_1|Type_1	31,31	39705355,39713708	psi1:0.872340425532,psi2:0.75	C1_41,C2_3	C1_6,C2_1	Yes
ENSG00000139116	KIF21A	chr12:39705324-39713738	-	ES_MULTI	180	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,12,39,129,31	39705355,39709031,39709042,39709734,39709772,39711875,39712003,39713708	No	Yes	No	bcc_28641|Cycle_13|Type_1	31,31	39705355,39713708	psi1:0.872340425532,psi2:0.75	C1_41,C2_3	C1_6,C2_1	Yes
ENSG00000131375	CAPN7	chr3:15282329-15283713	+	ES	136	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,136,29	15282360,15282960,15283095,15283685	No	No	No	bcc_50157|Cycle_0|Type_1	31,29	15282360,15283685	psi1:0.625,psi2:0.71875	C1_10,C2_23	C1_6,C2_9	Yes
ENSG00000189077	TMEM120A	chr7:75616512-75616707	-	altA	62	Yes	Yes	polymorphic_pseudogene	all_splice_sites_known_(3_ss)	91,30	75616603,75616678	No	No	No	bcc_60299|Cycle_0|Type_1	29,30	75616541,75616678	psi1:1.0,psi2:0.922580645161	C1_19,C2_143	C1_0,C2_12	Yes
ENSG00000099834	CDHR5	chr11:618083-619336	-	ES	156	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):618599,619306,618111	28,156,31	618111,618599,618754,619306	No	Yes	Yes	bcc_62344|Cycle_92|Type_1	28,31	618111,619306	psi1:1.0,psi2:0.736842105263	C1_1,C2_28	C1_0,C2_10	Yes
ENSG00000130726	TRIM28	chr19:59060112-59060260	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):59060229,59060143	31,32	59060143,59060229	No	No	No	bcc_51438|Cycle_0|Type_1	31,29	59060143,59060232	psi1:0.884615384615,psi2:0.941176470588	C1_23,C2_16	C1_3,C2_1	Yes
ENSG00000165119	HNRNPK	chr9:86588283-86589462	-	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,72,31	86588314,86588817,86588888,86589432	No	No	No	bcc_30398|Cycle_0|Type_1	31,31	86588314,86589432	psi1:0.948103792415,psi2:0.985915492958	C1_475,C2_280	C1_26,C2_4	Yes
ENSG00000025772	TOMM34	chr20:43572191-43580504	-	ES	148	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,148,31	43572220,43577371,43577518,43580474	No	No	No	bcc_56522|Cycle_0|Type_1	29,31	43572220,43580474	psi1:0.967741935484,psi2:1.0	C1_60,C2_23	C1_2,C2_0	Yes
ENSG00000091527	CDV3	chr3:133293928-133302877	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	133293959,133302846	No	No	No	bcc_33120|Cycle_0|Type_1	31,29	133293959,133302849	psi1:0.964285714286,psi2:0.921052631579	C1_54,C2_35	C1_2,C2_3	Yes
ENSG00000157538	DSCR3	chr21:38604721-38610791	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,81,31	38604752,38605663,38605743,38610761	No	No	No	bcc_17200|Cycle_0|Type_1	31,31	38604752,38610761	psi1:0.9375,psi2:0.88	C1_15,C2_22	C1_1,C2_3	Yes
ENSG00000104529	EEF1D	chr8:144668988-144679548	-	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	34,31	144669022,144679518	No	No	No	bcc_53756|Cycle_0|Type_1	31,31	144669019,144679518	psi1:1.0,psi2:0.865979381443	C1_6,C2_84	C1_0,C2_13	Yes
ENSG00000157654,ENSG00000241978	PALM2-AKAP2,AKAP2	chr9:112900789-112930709	+	ES	179	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,179,31	112900819,112918599,112918777,112930679	No	No	No	bcc_28020|Cycle_0|Type_1	30,31	112900819,112930679	psi1:0.727272727273,psi2:0.809523809524	C1_8,C2_17	C1_3,C2_4	Yes
ENSG00000125503	PPP1R12C	chr19:55606938-55607264	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,30	55606971,55607235	No	No	No	bcc_58437|Cycle_0|Type_1	30,30	55606968,55607235	psi1:0.375,psi2:0.285714285714	C1_3,C2_2	C1_5,C2_5	Yes
ENSG00000168036	CTNNB1	chr3:41280814-41281179	-	IR	305	Yes	-	protein_coding	no_known_ss	365	-	No	Yes	No	bcc_6775|Cycle_2|Type_1	31,29	41280845,41281151	psi1:0.925925925926,psi2:0.867647058824	C1_375,C2_177	C1_30,C2_27	(AG:41281151,GT:41280845)
ENSG00000072778	ACADVL	chr17:7125369-7125523	+	IR	95	Yes	Yes	protein_coding	no_known_ss	154	-	No	No	No	bcc_42976|Cycle_0|Type_1	31,28	7125400,7125496	psi1:0.428571428571,psi2:0.170454545455	C1_3,C2_60	C1_4,C2_292	(GC:7125400,AG:7125496)
ENSG00000168994	PXDC1	chr6:3737399-3738321	-	ES	114	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):3738291,3737430	31,114,31	3737430,3737851,3737964,3738291	No	No	No	bcc_25292|Cycle_0|Type_1	31,31	3737430,3738291	psi1:0.315789473684,psi2:0.21897810219	C1_12,C2_30	C1_26,C2_107	Yes
ENSG00000128463	EMC4	chr15:34520016-34521984	+	ES	161	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,161,31	34520047,34520630,34520790,34521954	No	No	No	bcc_42519|Cycle_0|Type_1	31,31	34520047,34521954	psi1:0.947826086957,psi2:0.897058823529	C1_109,C2_122	C1_6,C2_14	Yes
ENSG00000140479	PCSK6	chr15:101924596-101929698	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):101929669,101924630	34,30	101924630,101929669	No	No	No	bcc_25324|Cycle_0|Type_1	31,30	101924627,101929669	psi1:1.0,psi2:0.916666666667	C1_9,C2_77	C1_0,C2_7	Yes
ENSG00000253729	PRKDC	chr8:48691625-48694969	-	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,93,31	48691654,48694723,48694815,48694939	No	No	No	bcc_34922|Cycle_1|Type_1	29,31	48691654,48694939	psi1:0.823529411765,psi2:0.888888888889	C1_14,C2_16	C1_3,C2_2	Yes
ENSG00000198732	SMOC1	chr14:70444651-70459162	+	altA	33	No	-	protein_coding	2_ss_annotated_(over_3_ss):70444682,70459134	31,62	70444682,70459101	No	No	No	bcc_50647|Cycle_0|Type_1	31,29	70444682,70459134	psi1:0.25,psi2:0.164179104478	C1_5,C2_11	C1_15,C2_56	Yes
ENSG00000174938	SEZ6L2	chr16:29883819-29884590	-	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,39,30	29883847,29884026,29884064,29884561	No	No	No	bcc_24467|Cycle_0|Type_1	28,30	29883847,29884561	psi1:0.731707317073,psi2:1.0	C1_30,C2_1	C1_11,C2_0	Yes
ENSG00000115204	MPV17	chr2:27535610-27545343	-	ES	116	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,116,29	27535639,27535861,27535976,27545315	No	No	No	bcc_60048|Cycle_0|Type_1	29,29	27535639,27545315	psi1:0.958333333333,psi2:1.0	C1_46,C2_12	C1_2,C2_0	Yes
ENSG00000033627	ATP6V0A1	chr17:40665965-40673075	+	ES	172	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,172,31	40665996,40666307,40666478,40673045	No	No	No	bcc_26458|Cycle_0|Type_1	31,31	40665996,40673045	psi1:0.943502824859,psi2:1.0	C1_167,C2_30	C1_10,C2_0	Yes
ENSG00000168036	CTNNB1	chr3:41280815-41281338	-	IR	464	Yes	-	protein_coding	no_known_ss	523	-	No	Yes	No	bcc_6775|Cycle_1|Type_1	30,29	41280845,41281310	psi1:0.959488272921,psi2:0.915204678363	C1_450,C2_313	C1_19,C2_29	(AG:41281310,GT:41280845)
ENSG00000079819	EPB41L2	chr6:131188692-131191498	-	ES	564	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,564,31	131188721,131190703,131191266,131191468	No	Yes	No	bcc_46240|Cycle_31|Type_1	29,31	131188721,131191468	psi1:0.967032967033,psi2:1.0	C1_88,C2_31	C1_3,C2_0	Yes
ENSG00000081154	PCNP	chr3:101293092-101298714	+	altA	52	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,81	101293123,101298634	No	Yes	No	bcc_6225|Cycle_0|Type_1	31,29	101293123,101298686	psi1:0.522522522523,psi2:0.657142857143	C1_116,C2_23	C1_106,C2_12	Yes
ENSG00000137575	SDCBP	chr8:59484842-59488491	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	59484873,59488459	No	No	No	bcc_35301|Cycle_0|Type_1	31,30	59484873,59488462	psi1:0.75,psi2:0.826086956522	C1_39,C2_38	C1_13,C2_8	Yes
ENSG00000108639	SYNGR2	chr17:76167104-76167849	+	ES	140	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,140,30	76167135,76167591,76167730,76167820	No	No	No	bcc_55590|Cycle_0|Type_1	31,30	76167135,76167820	psi1:1.0,psi2:0.955056179775	C1_20,C2_85	C1_0,C2_4	Yes
ENSG00000115966	ATF2	chr2:175983067-175994896	-	ES	97	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,97,31	175983097,175986172,175986268,175994866	No	No	No	bcc_2957|Cycle_0|Type_1	30,31	175983097,175994866	psi1:0.82,psi2:0.909090909091	C1_41,C2_10	C1_9,C2_1	Yes
ENSG00000213619,ENSG00000110536	NDUFS3,PTPMT1	chr11:47587508-47593050	+	ES	192	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,192,28	47587538,47591252,47591443,47593023	No	No	No	bcc_53116|Cycle_0|Type_1	30,28	47587538,47593023	psi1:0.927536231884,psi2:0.872340425532	C1_64,C2_41	C1_5,C2_6	Yes
ENSG00000163660	CCNL1	chr3:156870914-156876685	-	ES	73	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,73,31	156870945,156874800,156874872,156876655	No	No	No	bcc_14954|Cycle_0|Type_1	31,31	156870945,156876655	psi1:0.545454545455,psi2:0.636363636364	C1_6,C2_7	C1_5,C2_4	Yes
ENSG00000169062	UPF3A	chr13:115048387-115052023	+	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,99,30	115048418,115051777,115051875,115051994	No	No	No	bcc_35702|Cycle_0|Type_1	31,30	115048418,115051994	psi1:0.869565217391,psi2:0.8	C1_40,C2_20	C1_6,C2_5	Yes
ENSG00000185627	PSMD13	chr11:250836-252533	+	ES_MULTI	198	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,81,117,29	250865,251546,251626,251820,251936,252505	No	No	No	bcc_56069|Cycle_0|Type_1	29,29	250865,252505	psi1:0.94495412844,psi2:0.979423868313	C1_103,C2_238	C1_6,C2_5	Yes
ENSG00000105699	LSR	chr19:35757610-35757771	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	35757641,35757739	No	No	No	bcc_34095|Cycle_0|Type_1	31,30	35757641,35757742	psi1:1.0,psi2:0.811320754717	C1_2,C2_43	C1_0,C2_10	Yes
ENSG00000154262	ABCA6	chr17:67084330-67085636	-	altA	38	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):67085606,67084399	69,31	67084399,67085606	No	No	No	bcc_24269|Cycle_0|Type_1	31,31	67084361,67085606	psi1:1.0,psi2:0.924050632911	C1_9,C2_73	C1_0,C2_6	Yes
ENSG00000149474	CSRP2BP	chr20:18139879-18142495	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,32	18139909,18142464	No	No	No	bcc_37012|Cycle_0|Type_1	30,29	18139909,18142467	psi1:0.5,psi2:0.6	C1_6,C2_3	C1_6,C2_2	Yes
ENSG00000100393	EP300	chr22:41574941-41575003	-	deletion	3	No	Yes	protein_coding	no_known_ss	62	41574941	No	No	No	bcc_3487|Cycle_0|Type_1	28,31	41574969,41574973	psi1:0.4,psi2:0.5	C1_4,C2_12	C1_6,C2_12	-
ENSG00000123983	ACSL3	chr2:223752577-223773480	+	ES	107	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	29,107,30	223752606,223765392,223765498,223773451	No	No	No	bcc_14263|Cycle_1|Type_1	29,30	223752606,223773451	psi1:0.625,psi2:0.75	C1_30,C2_6	C1_18,C2_2	Yes
ENSG00000153037	SRP19	chr5:112200398-112203131	+	altA	32	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,63	112200429,112203069	No	No	No	bcc_31481|Cycle_0|Type_1	31,31	112200429,112203101	psi1:0.233333333333,psi2:0.155844155844	C1_7,C2_12	C1_23,C2_65	Yes
ENSG00000187325	TAF9B	chrX:77385193-77387140	-	IR	1886	Yes	Yes	protein_coding	no_known_AS	1947	-	No	No	No	bcc_19827|Cycle_1|Type_1	31,30	77385224,77387111	psi1:1.0,psi2:0.988764044944	C1_496,C2_176	C1_0,C2_2	Yes
ENSG00000130813	C19orf66	chr19:10201999-10202181	+	IR	122	Yes	Yes	protein_coding	no_known_ss	182	-	No	Yes	No	bcc_16490|Cycle_0|Type_1	30,30	10202029,10202152	psi1:0.666666666667,psi2:0.52	C1_2,C2_13	C1_1,C2_12	Yes
ENSG00000170004	CHD3	chr17:7812116-7812489	+	altAD	9	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):7812147,7812461	30,39	7812146,7812451	No	No	No	bcc_26039|Cycle_0|Type_1	31,29	7812147,7812461	psi1:0.0909090909091,psi2:0	C1_2,C2_0	C1_20,C2_2	(GT:7812147,AG:7812461);(GG:7812146,CT:7812451)
ENSG00000143845	ETNK2	chr1:204103686-204106261	-	altA	106	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	136,30	204103822,204106232	No	No	No	bcc_56451|Cycle_0|Type_1	30,30	204103716,204106232	psi1:0,psi2:0.137724550898	C1_0,C2_23	C1_9,C2_144	Yes
ENSG00000268790,ENSG00000214046	CTC-429P9.4,SMIM7	chr19:16758041-16770235	-	ES	91	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,91,30	16758072,16764846,16764936,16770206	No	No	No	bcc_45319|Cycle_0|Type_1	31,30	16758072,16770206	psi1:0.932432432432,psi2:0.971223021583	C1_138,C2_135	C1_10,C2_4	Yes
ENSG00000197343	ZNF655	chr7:99158287-99161497	+	ES_MULTI	213	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,86,127,12	99158318,99159511,99159596,99159991,99160117,99161486	No	No	No	bcc_56445|Cycle_1|Type_1	31,12	99158318,99161486	psi1:1.0,psi2:0.921052631579	C1_4,C2_35	C1_0,C2_3	Yes
ENSG00000113742	CPEB4	chr5:173317027-173317263	+	IR	175	Yes	Yes	protein_coding	no_known_ss	236	-	No	No	No	bcc_5907|Cycle_0|Type_1	31,30	173317058,173317234	psi1:0.95652173913,psi2:1.0	C1_44,C2_10	C1_2,C2_0	(CT:173317058,AC:173317234)
ENSG00000154608	CEP170P1	chr4:119459081-119461404	+	altD	51	No	-	pseudogene	all_splice_sites_known_(3_ss)	82,31	119459163,119461374	Yes	Yes	No	bcc_34845|Cycle_4|Type_1	31,31	119459112,119461374	psi1:0.814814814815,psi2:1.0	C1_22,C2_1	C1_5,C2_0	Yes
ENSG00000143702	CEP170	chr1:243303378-243305699	-	altD	51	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,82	243303409,243305618	Yes	Yes	No	bcc_34845|Cycle_4|Type_1	31,31	243303409,243305669	psi1:0.814814814815,psi2:1.0	C1_22,C2_1	C1_5,C2_0	Yes
ENSG00000134644	PUM1	chr1:31414092-31418222	-	ES	126	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,126,30	31414119,31414845,31414970,31418193	No	No	No	bcc_1272|Cycle_1|Type_1	27,30	31414119,31418193	psi1:0.970149253731,psi2:1.0	C1_65,C2_24	C1_2,C2_0	Yes
ENSG00000113712	CSNK1A1	chr5:148876394-148885075	-	altD	36	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,66	148876423,148885010	No	No	No	bcc_1707|Cycle_0|Type_1	29,30	148876423,148885046	psi1:0.5,psi2:0.4	C1_39,C2_12	C1_39,C2_18	(AC:148885010,CT:148876423);(GC:148885046,CT:148876423)
ENSG00000081189	MEF2C	chr5:88119713-88178802	-	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	34,31	88119747,88178772	No	No	No	bcc_32514|Cycle_0|Type_1	31,31	88119744,88178772	psi1:0.59756097561,psi2:1.0	C1_49,C2_1	C1_33,C2_0	Yes
ENSG00000005483	KMT2E	chr7:104746419-104746996	+	IR	518	Yes	Yes	protein_coding	no_known_ss	577	-	No	No	No	bcc_2279|Cycle_0|Type_1	31,28	104746450,104746969	psi1:0.804597701149,psi2:1.0	C1_70,C2_3	C1_17,C2_0	Yes
ENSG00000256500,ENSG00000256053	RP11-73M18.2,APOPT1	chr14:104038127-104053639	+	ES	64	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,64,29	104038157,104040444,104040507,104053611	No	No	No	bcc_12866|Cycle_0|Type_1	30,29	104038157,104053611	psi1:0.826086956522,psi2:0.888888888889	C1_19,C2_32	C1_4,C2_4	Yes
ENSG00000164985	PSIP1	chr9:15471278-15472660	+	IR	1320	No	Yes	protein_coding	no_known_ss	1382	-	No	Yes	No	bcc_9325|Cycle_29|Type_1	31,31	15471309,15472630	psi1:0.784461152882,psi2:1.0	C1_313,C2_12	C1_86,C2_0	(CT:15471309,AC:15472630)
ENSG00000170871	KIAA0232	chr4:6873378-6882543	+	ES	98	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,98,30	6873409,6878387,6878484,6882514	No	No	No	bcc_8406|Cycle_0|Type_1	31,30	6873409,6882514	psi1:0.866666666667,psi2:0.941176470588	C1_65,C2_16	C1_10,C2_1	Yes
ENSG00000135336	ORC3	chr6:88317512-88318845	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):88318814,88317542	30,32	88317542,88318814	No	No	No	bcc_50327|Cycle_2|Type_1	30,29	88317542,88318817	psi1:0.833333333333,psi2:1.0	C1_20,C2_1	C1_4,C2_0	Yes
ENSG00000060237	WNK1	chr12:971408-987410	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,33	971436,987378	No	Yes	No	bcc_37125|Cycle_0|Type_1	28,30	971436,987381	psi1:0.7,psi2:0.8	C1_14,C2_4	C1_6,C2_1	Yes
ENSG00000139116	KIF21A	chr12:39705324-39713738	-	ES_MULTI	183	No	Yes	protein_coding	7_ss_annotated_(over_8_ss):39711875,39709734,39709031,39713708,39705355,39709772,39712003	31,15,39,129,31	39705355,39709031,39709045,39709734,39709772,39711875,39712003,39713708	No	Yes	No	bcc_28641|Cycle_12|Type_1	31,31	39705355,39713708	psi1:0.863636363636,psi2:0.75	C1_38,C2_3	C1_6,C2_1	Yes
ENSG00000139613	SMARCC2	chr12:56566458-56567510	-	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,93,31	56566488,56566721,56566813,56567480	No	No	No	bcc_53659|Cycle_0|Type_1	30,31	56566488,56567480	psi1:0.853658536585,psi2:1.0	C1_35,C2_2	C1_6,C2_0	Yes
ENSG00000145730	PAM	chr5:102355517-102363917	+	ES	198	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	30,201,29	102355547,102360838,102361038,102363889	No	Yes	No	bcc_49320|Cycle_2|Type_1	30,32	102355547,102363886	psi1:0.883720930233,psi2:0.8	C1_76,C2_12	C1_10,C2_3	(GC:102361038,AG:102363889);(GT:102355547,AG:102363886);(GT:102355547,AG:102360838)
ENSG00000187109	NAP1L1	chr12:76441467-76442230	-	ES_altAD	700	Yes	-	protein_coding	2_ss_annotated_(over_6_ss):76442201,76441498	269,118,374	76441736,76441738,76441855,76441857	No	Yes	No	bcc_14511|Cycle_40|Type_1	31,30	76441498,76442201	psi1:0.969837587007,psi2:0.923076923077	C1_418,C2_72	C1_13,C2_6	-;-;(AC:76442201,CT:76441498)
ENSG00000116754	SRSF11	chr1:70697628-70697978	-	IR	292	Yes	Yes	protein_coding	no_known_ss	350	-	No	No	No	bcc_35881|Cycle_0|Type_1	30,28	70697658,70697951	psi1:0.758620689655,psi2:0.666666666667	C1_22,C2_6	C1_7,C2_3	(AG:70697951,GT:70697658)
ENSG00000090863	GLG1	chr16:74486001-74487098	+	IR	1039	Yes	Yes	protein_coding	no_known_ss	1097	-	No	Yes	No	bcc_4140|Cycle_2|Type_1	28,30	74486029,74487069	psi1:0.990697674419,psi2:0.965909090909	C1_426,C2_255	C1_4,C2_9	(CT:74486029,AC:74487069)
ENSG00000186908	ZDHHC17	chr12:77208960-77209706	+	altA	41	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,70	77208990,77209637	No	No	No	bcc_40087|Cycle_1|Type_1	30,29	77208990,77209678	psi1:0.878787878788,psi2:1.0	C1_29,C2_2	C1_4,C2_0	Yes
ENSG00000115993	TRAK2	chr2:202254103-202254554	-	altA	92	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):202254226,202254524	123,31	202254226,202254524	No	No	No	bcc_33862|Cycle_0|Type_1	31,31	202254134,202254524	psi1:0.911764705882,psi2:1.0	C1_31,C2_3	C1_3,C2_0	Yes
ENSG00000258461,ENSG00000092529	RP11-164J13.1,CAPN3	chr15:42697124-42701531	+	ES	114	No	Yes	processed_transcript,protein_coding	all_splice_sites_known_(4_ss)	29,114,31	42697153,42700409,42700522,42701501	No	No	No	bcc_49912|Cycle_0|Type_1	29,31	42697153,42701501	psi1:0.854838709677,psi2:1.0	C1_53,C2_3	C1_9,C2_0	Yes
ENSG00000153113	CAST	chr5:96098045-96100957	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	96098076,96100925	No	No	No	bcc_38167|Cycle_0|Type_1	31,30	96098076,96100928	psi1:0.782608695652,psi2:0.693548387097	C1_18,C2_43	C1_5,C2_19	Yes
ENSG00000083857	FAT1	chr4:187509312-187509375	-	deletion	3	No	-	protein_coding	no_known_ss	63	187509312	No	No	No	bcc_32614|Cycle_0|Type_1	29,31	187509341,187509345	psi1:1.0,psi2:0.923076923077	C1_4,C2_36	C1_0,C2_3	-
ENSG00000019582	CD74	chr5:149782158-149784273	-	ES	192	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,192,31	149782188,149782684,149782875,149784243	No	No	No	bcc_55860|Cycle_0|Type_1	30,31	149782188,149784243	psi1:0.454918032787,psi2:0.35632183908	C1_111,C2_31	C1_133,C2_56	Yes
ENSG00000105223	PLD3	chr19:40854645-40871597	+	altA	109	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,138	40854675,40871460	No	Yes	No	bcc_13852|Cycle_2|Type_1	30,29	40854675,40871569	psi1:0.942857142857,psi2:0.976744186047	C1_33,C2_42	C1_2,C2_1	Yes
ENSG00000168036	CTNNB1	chr3:41280814-41281338	+	altA	159	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,188	41280845,41281151	No	Yes	No	bcc_6775|Cycle_0|Type_1	31,29	41280845,41281310	psi1:0.897849462366,psi2:0.838235294118	C1_167,C2_171	C1_19,C2_33	Yes
ENSG00000115414	FN1	chr2:216236709-216238075	-	ES	267	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,267,31	216236738,216236832,216237098,216238045	No	Yes	No	bcc_27754|Cycle_1|Type_1	29,31	216236738,216238045	psi1:0.828947368421,psi2:0.932346723044	C1_63,C2_1323	C1_13,C2_96	Yes
ENSG00000204231	RXRB	chr6:33163201-33163376	-	altA	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	42,30	33163243,33163347	No	No	No	bcc_52643|Cycle_1|Type_1	30,30	33163231,33163347	psi1:0.642857142857,psi2:0.555555555556	C1_9,C2_5	C1_5,C2_4	Yes
ENSG00000055070	SZRD1	chr1:16693777-16719755	+	ES	50	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	26,50,30	16693803,16717870,16717919,16719726	No	Yes	No	bcc_35632|Cycle_19|Type_1	26,30	16693803,16719726	psi1:0.642857142857,psi2:0.555555555556	C1_9,C2_5	C1_5,C2_4	Yes
ENSG00000143252	SDHC	chr1:161293430-161310414	+	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,102,31	161293460,161298186,161298287,161310384	No	No	No	bcc_36259|Cycle_0|Type_1	30,31	161293460,161310384	psi1:0.9,psi2:0.947368421053	C1_45,C2_108	C1_5,C2_6	Yes
ENSG00000144567	FAM134A	chr2:220047000-220047166	-	IR	105	No	Yes	protein_coding	no_known_ss	166	-	No	No	No	bcc_52369|Cycle_0|Type_1	30,31	220047030,220047136	psi1:0.901960784314,psi2:0.84375	C1_46,C2_27	C1_5,C2_5	(AG:220047136,GT:220047030)
ENSG00000164985	PSIP1	chr9:15471143-15472659	-	altA	55	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	86,30	15471229,15472630	No	Yes	No	bcc_9325|Cycle_6|Type_1	31,30	15471174,15472630	psi1:0.918918918919,psi2:1.0	C1_68,C2_7	C1_6,C2_0	Yes
ENSG00000213465,ENSG00000273003	ARL2,RP11-399J13.3	chr11:64786174-64789220	+	ES	81	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,81,28	64786205,64787891,64787971,64789193	No	No	No	bcc_67158|Cycle_0|Type_1	31,28	64786205,64789193	psi1:0.918918918919,psi2:1.0	C1_68,C2_7	C1_6,C2_0	Yes
ENSG00000005810	MYCBP2	chr13:77825462-77831844	-	altD	9	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):77825490,77831806	28,39	77825490,77831806	No	No	No	bcc_45405|Cycle_0|Type_1	28,30	77825490,77831815	psi1:0.913043478261,psi2:1.0	C1_21,C2_2	C1_2,C2_0	Yes
ENSG00000133983,ENSG00000258644	COX16,SYNJ2BP-COX16	chr14:70795922-70826266	-	ES	72	No	Yes	protein_coding,processed_transcript	all_splice_sites_known_(4_ss)	31,72,31	70795953,70809375,70809446,70826236	No	No	No	bcc_31367|Cycle_0|Type_1	31,31	70795953,70826236	psi1:0.986486486486,psi2:0.947916666667	C1_73,C2_182	C1_1,C2_10	Yes
ENSG00000009307	CSDE1	chr1:115269681-115275254	-	ES_MULTI	306	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,165,141,30	115269711,115272879,115273043,115273129,115273269,115275225	No	No	No	bcc_15874|Cycle_0|Type_1	30,30	115269711,115275225	psi1:0.976833976834,psi2:1.0	C1_759,C2_365	C1_18,C2_0	Yes
ENSG00000133612	AGAP3	chr7:150817201-150819841	+	ES	226	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,226,30	150817232,150817607,150817832,150819812	No	No	No	bcc_25296|Cycle_0|Type_1	31,30	150817232,150819812	psi1:0.69387755102,psi2:0.571428571429	C1_68,C2_8	C1_30,C2_6	Yes
ENSG00000050426	LETMD1	chr12:51442937-51450162	+	ES_MULTI	488	Yes	Yes	protein_coding	all_splice_sites_known_(10_ss)	31,116,83,187,102,30	51442968,51445875,51445990,51447561,51447643,51449618,51449804,51449927,51450028,51450133	No	Yes	No	bcc_42229|Cycle_4|Type_1	31,30	51442968,51450133	psi1:0.978021978022,psi2:1.0	C1_89,C2_46	C1_2,C2_0	Yes
ENSG00000141198	TOM1L1	chr17:52981122-52990057	+	ES	79	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,79,31	52981153,52982850,52982928,52990027	No	No	No	bcc_5417|Cycle_0|Type_1	31,31	52981153,52990027	psi1:1.0,psi2:0.821428571429	C1_1,C2_23	C1_0,C2_5	Yes
ENSG00000110077	MS4A6A	chr11:59940572-59943008	-	altD	104	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,134	59940602,59942875	No	No	No	bcc_23929|Cycle_0|Type_1	30,30	59940602,59942979	psi1:0.933333333333,psi2:0.979452054795	C1_14,C2_143	C1_1,C2_3	Yes
ENSG00000079819	EPB41L2	chr6:131188693-131191498	-	ES	315	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,315,31	131188721,131190952,131191266,131191468	No	Yes	No	bcc_46240|Cycle_28|Type_1	28,31	131188721,131191468	psi1:0.962962962963,psi2:1.0	C1_52,C2_13	C1_2,C2_0	Yes
ENSG00000227232	WASH7P	chr1:18032-24767	-	ES	112	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	29,112,30	18061,18268,18379,24738	Yes	Yes	No	bcc_28878|Cycle_0|Type_1	29,30	18061,24738	psi1:0.918918918919,psi2:0.961538461538	C1_34,C2_25	C1_3,C2_1	Yes
ENSG00000181404	XXyac-YRM2039.2	chr9:18145-24880	-	ES	112	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	29,112,30	18174,18381,18492,24851	Yes	Yes	No	bcc_28878|Cycle_0|Type_1	29,30	18174,24851	psi1:0.918918918919,psi2:0.961538461538	C1_34,C2_25	C1_3,C2_1	Yes
ENSG00000187109	NAP1L1	chr12:76441467-76442230	-	altAD	701	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):76441498,76442201	388,374	76441855,76441857	No	Yes	No	bcc_14511|Cycle_39|Type_1	31,30	76441498,76442201	psi1:0.970319634703,psi2:0.925925925926	C1_425,C2_75	C1_13,C2_6	-;(AC:76442201,CT:76441498)
ENSG00000099849	RASSF7	chr11:563286-563587	+	altD	161	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	192,30	563478,563558	No	No	No	bcc_69766|Cycle_0|Type_1	31,30	563317,563558	psi1:1.0,psi2:0.882352941176	C1_1,C2_15	C1_0,C2_2	Yes
ENSG00000117791	MARC2	chr1:220955244-220957290	+	altD	7	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):220955274,220957261	37,30	220955281,220957261	No	No	No	bcc_43689|Cycle_0|Type_1	30,30	220955274,220957261	psi1:0.206896551724,psi2:0.127659574468	C1_6,C2_18	C1_23,C2_123	Yes
ENSG00000047849	MAP4	chr3:47894399-47896767	-	ES_altA	291	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	130,190,30	47894529,47894653,47894842,47896738	No	Yes	No	bcc_6457|Cycle_1|Type_1	29,30	47894428,47896738	psi1:0.975409836066,psi2:1.0	C1_119,C2_50	C1_3,C2_0	Yes
ENSG00000111676	ATN1	chr12:7037516-7043046	+	altA	16	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):7037547,7043003	31,44	7037547,7043003	No	No	No	bcc_15969|Cycle_0|Type_1	31,28	7037547,7043019	psi1:0.84,psi2:1.0	C1_21,C2_1	C1_4,C2_0	Yes
ENSG00000115875	SRSF7	chr2:38975766-38976699	-	IR	875	Yes	Yes	protein_coding	no_known_ss	933	-	No	Yes	No	bcc_31545|Cycle_4|Type_1	29,29	38975795,38976671	psi1:0.51724137931,psi2:0.601694915254	C1_60,C2_71	C1_56,C2_47	Yes
ENSG00000017260	ATP2C1	chr3:130720129-130735026	+	altD	30	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	59,31	130720188,130734996	No	Yes	No	bcc_27727|Cycle_2|Type_1	29,31	130720158,130734996	psi1:0.65625,psi2:0.777777777778	C1_42,C2_7	C1_22,C2_2	Yes
ENSG00000114942	EEF1B2	chr2:207024377-207024711	-	IR	274	Yes	-	protein_coding	no_known_ss	334	-	No	Yes	No	bcc_6298|Cycle_0|Type_1	31,29	207024408,207024683	psi1:0.970588235294,psi2:0.923913043478	C1_33,C2_85	C1_1,C2_7	(AG:207024683,GT:207024408)
ENSG00000188690	UROS	chr10:127500827-127505036	-	ES_MULTI	181	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,97,84,31	127500857,127503603,127503699,127504746,127504829,127505006	No	No	No	bcc_49022|Cycle_0|Type_1	30,31	127500857,127505006	psi1:0.975961538462,psi2:1.0	C1_203,C2_87	C1_5,C2_0	Yes
ENSG00000099864	PALM	chr19:736047-746313	+	ES	132	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,132,29	736078,740352,740483,746285	No	No	No	bcc_69810|Cycle_0|Type_1	31,29	736078,746285	psi1:0.783783783784,psi2:1.0	C1_29,C2_1	C1_8,C2_0	Yes
ENSG00000112715	VEGFA	chr6:43748491-43749723	+	altD	18	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	49,31	43748540,43749693	No	Yes	No	bcc_39955|Cycle_0|Type_1	31,31	43748522,43749693	psi1:1.0,psi2:0.783783783784	C1_1,C2_29	C1_0,C2_8	Yes
ENSG00000132466	ANKRD17	chr4:73968237-73984435	-	ES_MULTI	213	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	27,117,96,31	73968264,73979509,73979625,73981538,73981633,73984405	No	No	No	bcc_19446|Cycle_0|Type_1	27,31	73968264,73984405	psi1:0.964705882353,psi2:1.0	C1_82,C2_21	C1_3,C2_0	Yes
ENSG00000140374	ETFA	chr15:76585011-76603720	-	ES	147	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,147,30	76585041,76587932,76588078,76603691	No	No	No	bcc_48749|Cycle_0|Type_1	30,30	76585041,76603691	psi1:0.939393939394,psi2:0.982558139535	C1_31,C2_338	C1_2,C2_6	Yes
ENSG00000154723	ATP5J	chr21:27102082-27107194	-	ES	43	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,43,31	27102112,27106644,27106686,27107164	No	Yes	No	bcc_51547|Cycle_2|Type_1	30,31	27102112,27107164	psi1:0.0513698630137,psi2:0.018779342723	C1_15,C2_4	C1_277,C2_209	Yes
ENSG00000064115	TM7SF3	chr12:27129260-27133529	-	ES	153	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,153,31	27129290,27132717,27132869,27133499	No	No	No	bcc_22106|Cycle_0|Type_1	30,31	27129290,27133499	psi1:1.0,psi2:0.978260869565	C1_22,C2_45	C1_0,C2_1	Yes
ENSG00000187109	NAP1L1	chr12:76441467-76442230	-	altAD	701	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):76442201,76441498	269,493	76441736,76441738	No	Yes	No	bcc_14511|Cycle_38|Type_1	31,30	76441498,76442201	psi1:0.970319634703,psi2:0.926829268293	C1_425,C2_76	C1_13,C2_6	-;(AC:76442201,CT:76441498)
ENSG00000105819	PMPCB	chr7:102953061-102953423	-	IR	303	No	Yes	protein_coding	no_known_ss	362	-	No	No	No	bcc_48574|Cycle_1|Type_1	29,30	102953090,102953394	psi1:0.837209302326,psi2:0.764705882353	C1_36,C2_13	C1_7,C2_4	Yes
ENSG00000183044	ABAT	chr16:8768538-8839887	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,111,30	8768568,8829556,8829666,8839858	No	No	No	bcc_29390|Cycle_0|Type_1	30,30	8768568,8839858	psi1:1.0,psi2:0.960526315789	C1_16,C2_73	C1_0,C2_3	Yes
ENSG00000086205	FOLH1	chr11:49214415-49227649	-	ES	187	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,187,31	49214446,49221807,49221993,49227619	No	No	No	bcc_17538|Cycle_2|Type_1	31,31	49214446,49227619	psi1:0.95867768595,psi2:1.0	C1_116,C2_24	C1_5,C2_0	Yes
ENSG00000132716,ENSG00000162735	DCAF8,PEX19	chr1:160252871-160254874	-	ES	110	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	28,110,30	160252899,160253320,160253429,160254845	No	No	No	bcc_23814|Cycle_1|Type_1	28,30	160252899,160254845	psi1:0.903225806452,psi2:0.947368421053	C1_56,C2_54	C1_6,C2_3	Yes
ENSG00000182149	IST1	chr16:71957254-71961540	+	unclassified	38	Yes	Yes	protein_coding	4_ss_annotated_(over_5_ss):71958720,71957283,71958676,71961517	29,45,24	71957283,71958676,71958720,71961517	No	Yes	No	bcc_12724|Cycle_2|Type_1	29,7,24	71957283,71958714,71958720,71961517	psi1:0.851851851852,psi2:0.785714285714	C1_23,C2_11	C1_4,C2_3	Yes
ENSG00000181191	PJA1	chrX:68382947-68385245	-	altA	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	36,31	68382983,68385215	No	No	No	bcc_56229|Cycle_0|Type_1	30,31	68382977,68385215	psi1:0.8125,psi2:1.0	C1_26,C2_1	C1_6,C2_0	Yes
ENSG00000138698	RAP1GDS1	chr4:99341264-99342437	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	99341295,99342406	No	No	No	bcc_3422|Cycle_0|Type_1	31,29	99341295,99342409	psi1:0.894736842105,psi2:1.0	C1_85,C2_6	C1_10,C2_0	Yes
ENSG00000115414	FN1	chr2:216236711-216238075	-	altA	360	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	387,31	216237098,216238045	No	Yes	No	bcc_27754|Cycle_3|Type_1	27,31	216236738,216238045	psi1:0.808823529412,psi2:0.911320754717	C1_55,C2_966	C1_13,C2_94	Yes
ENSG00000143303	RRNAD1	chr1:156705670-156706453	+	altA	13	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):156706424,156705701	31,43	156705701,156706411	No	No	No	bcc_57368|Cycle_1|Type_1	31,30	156705701,156706424	psi1:0.272727272727,psi2:0.2	C1_3,C2_4	C1_8,C2_16	Yes
ENSG00000111011	RSRC2	chr12:123003547-123005962	-	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,78,31	123003576,123005051,123005128,123005932	No	Yes	No	bcc_41940|Cycle_0|Type_1	29,31	123003576,123005932	psi1:0.162790697674,psi2:0.25	C1_7,C2_2	C1_36,C2_6	Yes
ENSG00000251562	MALAT1	chr11:65267192-65267288	+	deletion	39	No	-	lincRNA	no_known_ss	96	65267192	No	No	No	bcc_15087|Cycle_4|Type_1	26,31	65267218,65267258	psi1:0.998161201348,psi2:0.980158730159	C1_3257,C2_247	C1_6,C2_5	-
ENSG00000187109	NAP1L1	chr12:76441467-76442230	-	ES_altAD	700	Yes	-	protein_coding	2_ss_annotated_(over_6_ss):76442201,76441498	269,144,348	76441736,76441738,76441881,76441883	No	Yes	No	bcc_14511|Cycle_9|Type_1	31,30	76441498,76442201	psi1:0.970251716247,psi2:0.927710843373	C1_424,C2_77	C1_13,C2_6	-;-;(AC:76442201,CT:76441498)
ENSG00000031823	RANBP3	chr19:5928071-5931459	-	altD	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	27,45	5928098,5931415	No	No	No	bcc_49443|Cycle_0|Type_1	27,30	5928098,5931430	psi1:0.714285714286,psi2:0.636363636364	C1_10,C2_7	C1_4,C2_4	Yes
ENSG00000101972	STAG2	chrX:123224583-123227898	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,111,31	123224614,123224704,123224814,123227868	No	No	No	bcc_31405|Cycle_0|Type_1	31,31	123224614,123227868	psi1:0.314285714286,psi2:0.4	C1_11,C2_6	C1_24,C2_9	Yes
ENSG00000130723	PRRC2B	chr9:134353305-134357143	+	ES_MULTI	288	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,146,142,31	134353336,134353861,134354006,134354639,134354780,134357113	No	No	No	bcc_19645|Cycle_0|Type_1	31,31	134353336,134357113	psi1:0.974025974026,psi2:1.0	C1_75,C2_27	C1_2,C2_0	Yes
ENSG00000143569	UBAP2L	chr1:154239013-154241263	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	154239044,154241233	No	No	No	bcc_55507|Cycle_0|Type_1	31,28	154239044,154241236	psi1:0.75,psi2:0.818181818182	C1_9,C2_9	C1_3,C2_2	Yes
ENSG00000108381	ASPA	chr17:3397722-3402220	+	altA	7	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):3397753,3402185	31,36	3397753,3402185	No	No	No	bcc_48962|Cycle_0|Type_1	31,29	3397753,3402192	psi1:0.863636363636,psi2:1.0	C1_19,C2_1	C1_3,C2_0	Yes
ENSG00000258289,ENSG00000257365,ENSG00000125954	CHURC1,FNTB,CHURC1-FNTB	chr14:65390813-65398886	+	ES	74	Yes	Yes	protein_coding,protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,74,31	65390844,65392725,65392798,65398856	No	Yes	No	bcc_5737|Cycle_1|Type_1	31,31	65390844,65398856	psi1:0.925373134328,psi2:0.872727272727	C1_62,C2_96	C1_5,C2_14	Yes
ENSG00000125844	RRBP1	chr20:17641142-17662703	-	ES	77	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,77,31	17641173,17660644,17660720,17662673	No	Yes	Yes	bcc_45156|Cycle_2|Type_1	31,31	17641173,17662673	psi1:0.636363636364,psi2:0.533333333333	C1_7,C2_24	C1_4,C2_21	Yes
ENSG00000068796	KIF2A	chr5:61648449-61649132	+	altD	57	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	88,31	61648537,61649102	No	No	No	bcc_9631|Cycle_0|Type_1	31,31	61648480,61649102	psi1:0.84,psi2:0.75	C1_21,C2_3	C1_4,C2_1	Yes
ENSG00000006625	GGCT	chr7:30538523-30544214	-	ES	146	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,146,30	30538554,30540152,30540297,30544185	No	No	No	bcc_56116|Cycle_0|Type_1	31,30	30538554,30544185	psi1:0.914285714286,psi2:0.954545454545	C1_32,C2_42	C1_3,C2_2	Yes
ENSG00000075292	ZNF638	chr2:71645738-71658484	+	ES_MULTI	2351	Yes	Yes	protein_coding	all_splice_sites_known_(10_ss)	31,1225,66,955,105,28	71645769,71649944,71651168,71651780,71651845,71653590,71654544,71655677,71655781,71658457	No	Yes	No	bcc_42111|Cycle_3|Type_1	31,28	71645769,71658457	psi1:0.997876857749,psi2:0.983402489627	C1_470,C2_237	C1_1,C2_4	Yes
ENSG00000187109	NAP1L1	chr12:76441468-76442230	-	altD	28	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,58	76441498,76442173	No	Yes	No	bcc_14511|Cycle_49|Type_1	30,30	76441498,76442201	psi1:0.910344827586,psi2:0.85	C1_132,C2_34	C1_13,C2_6	Yes
ENSG00000056586	RC3H2	chr9:125612070-125613408	-	altD	19	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,49	125612101,125613360	No	No	No	bcc_46044|Cycle_0|Type_1	31,30	125612101,125613379	psi1:0.846153846154,psi2:1.0	C1_22,C2_1	C1_4,C2_0	Yes
ENSG00000104093	DMXL2	chr15:51757043-51758411	-	ES	86	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,86,31	51757073,51757763,51757848,51758381	No	No	No	bcc_42031|Cycle_0|Type_1	30,31	51757073,51758381	psi1:0.846153846154,psi2:1.0	C1_22,C2_1	C1_4,C2_0	Yes
ENSG00000187109	NAP1L1	chr12:76441467-76442230	-	IR	702	No	-	protein_coding	no_known_ss	763	-	No	Yes	No	bcc_14511|Cycle_2|Type_1	31,30	76441498,76442201	psi1:0.970786516854,psi2:0.929411764706	C1_432,C2_79	C1_13,C2_6	Yes
ENSG00000067955	CBFB	chr16:67116181-67132642	+	altD	31	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	61,30	67116242,67132613	No	No	No	bcc_48410|Cycle_0|Type_1	30,30	67116211,67132613	psi1:0.783783783784,psi2:0.7	C1_29,C2_7	C1_8,C2_3	Yes
ENSG00000166783	KIAA0430	chr16:15716924-15718656	-	altA	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	56,31	15716980,15718626	No	No	No	bcc_44338|Cycle_0|Type_1	29,31	15716953,15718626	psi1:0.888888888889,psi2:1.0	C1_16,C2_1	C1_2,C2_0	Yes
ENSG00000115602	IL1RL1	chr2:102958724-102959567	+	altA	42	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,72	102958754,102959496	No	No	No	bcc_28765|Cycle_0|Type_1	30,30	102958754,102959538	psi1:0.962962962963,psi2:0.925925925926	C1_26,C2_25	C1_1,C2_2	Yes
ENSG00000082146	STRADB	chr2:202342883-202343314	+	altA	206	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,235	202342914,202343080	No	No	No	bcc_44041|Cycle_0|Type_1	31,29	202342914,202343286	psi1:0.983870967742,psi2:0.951219512195	C1_61,C2_117	C1_1,C2_6	Yes
ENSG00000180488	FAM73A	chr1:78325040-78326937	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,87,29	78325071,78325725,78325811,78326909	No	No	No	bcc_2432|Cycle_0|Type_1	31,29	78325071,78326909	psi1:0.936170212766,psi2:1.0	C1_44,C2_5	C1_3,C2_0	Yes
ENSG00000175662	TOM1L2	chr17:17783029-17797005	-	ES_MULTI	294	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	28,159,135,31	17783057,17786019,17786177,17787948,17788082,17796975	No	Yes	No	bcc_5714|Cycle_3|Type_1	28,31	17783057,17796975	psi1:0.943820224719,psi2:1.0	C1_84,C2_11	C1_5,C2_0	Yes
ENSG00000092330	TINF2	chr14:24709505-24709654	-	IR	88	Yes	Yes	protein_coding	no_known_ss	149	-	No	No	No	bcc_61450|Cycle_0|Type_1	31,30	24709536,24709625	psi1:0.909090909091,psi2:0.952380952381	C1_30,C2_20	C1_3,C2_1	Yes
ENSG00000187109	NAP1L1	chr12:76441467-76442230	-	altAD	701	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):76441498,76442201	414,348	76441881,76441883	No	Yes	No	bcc_14511|Cycle_1|Type_1	31,30	76441498,76442201	psi1:0.970720720721,psi2:0.93023255814	C1_431,C2_80	C1_13,C2_6	-;(AC:76442201,CT:76441498)
ENSG00000231840	AC073342.12	chr7:142962154-142962383	+	IR	168	No	Yes	antisense	no_known_ss	229	-	No	No	No	bcc_41698|Cycle_0|Type_1	31,30	142962185,142962354	psi1:0.24,psi2:0.156028368794	C1_6,C2_22	C1_19,C2_119	Yes
ENSG00000169902	TPST1	chr7:65751665-65821841	+	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,51,30	65751696,65817492,65817542,65821812	No	No	No	bcc_26665|Cycle_0|Type_1	31,30	65751696,65821812	psi1:0.951219512195,psi2:0.909090909091	C1_39,C2_50	C1_2,C2_5	Yes
ENSG00000131236	CAP1	chr1:40506442-40525037	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,32	40506473,40525006	No	Yes	No	bcc_22511|Cycle_7|Type_1	31,29	40506473,40525009	psi1:0.369565217391,psi2:0.272727272727	C1_17,C2_3	C1_29,C2_8	Yes
ENSG00000103024	NME3	chr16:1820736-1820919	-	altD	8	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,38	1820767,1820882	No	No	No	bcc_69565|Cycle_0|Type_1	31,30	1820767,1820890	psi1:0.833333333333,psi2:0.769230769231	C1_10,C2_10	C1_2,C2_3	Yes
ENSG00000129484	PARP2	chr14:20813215-20813581	+	altD	39	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	70,29	20813285,20813553	No	No	No	bcc_31747|Cycle_0|Type_1	31,29	20813246,20813553	psi1:0.5,psi2:0.666666666667	C1_23,C2_2	C1_23,C2_1	Yes
ENSG00000005483	KMT2E	chr7:104751018-104751246	+	IR	168	No	Yes	protein_coding	no_known_ss	228	-	No	Yes	No	bcc_2285|Cycle_4|Type_1	31,29	104751049,104751218	psi1:0.567567567568,psi2:0.666666666667	C1_21,C2_6	C1_16,C2_3	Yes
ENSG00000158545	ZC3H18	chr16:88653061-88664612	+	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,72,27	88653092,88653950,88654021,88664586	No	No	No	bcc_54201|Cycle_0|Type_1	31,27	88653092,88664586	psi1:0.368421052632,psi2:0.5	C1_7,C2_1	C1_12,C2_1	Yes
ENSG00000145919	BOD1	chr5:173035264-173040164	-	ES	197	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,197,31	173035295,173036241,173036437,173040134	No	No	No	bcc_51504|Cycle_0|Type_1	31,31	173035295,173040134	psi1:0.92,psi2:0.961538461538	C1_46,C2_25	C1_4,C2_1	Yes
ENSG00000122545	SEPT7	chr7:35840851-35872444	+	IR	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):35840880,35872408	31,37	-	No	Yes	No	bcc_5294|Cycle_3|Type_1	29,1,32	35840880,35872408,35872408,35872413	psi1:0.585585585586,psi2:1.0	C1_65,C2_1	C1_46,C2_0	(AA:35872408,CA:35872413);(GT:35840880,AG:35872408)
ENSG00000175287	PHYHD1	chr9:131702746-131703754	+	ES	117	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,117,31	131702776,131702878,131702994,131703724	No	No	No	bcc_57727|Cycle_0|Type_1	30,31	131702776,131703724	psi1:0.96875,psi2:0.928571428571	C1_31,C2_65	C1_1,C2_5	Yes
ENSG00000148737	TCF7L2	chr10:114905825-114910785	+	altA	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,44	114905856,114910742	No	No	No	bcc_9227|Cycle_0|Type_1	31,29	114905856,114910757	psi1:0.416666666667,psi2:0.5	C1_5,C2_3	C1_7,C2_3	Yes
ENSG00000133794	ARNTL	chr11:13391283-13393741	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	13391314,13393710	No	No	No	bcc_53112|Cycle_0|Type_1	31,29	13391314,13393713	psi1:0.7,psi2:0.625	C1_7,C2_5	C1_3,C2_3	Yes
ENSG00000104714	ERICH1	chr8:618752-623319	-	altA	10	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):618792,623289	40,31	618792,623289	No	No	No	bcc_58080|Cycle_0|Type_1	30,31	618782,623289	psi1:0.869565217391,psi2:1.0	C1_20,C2_1	C1_3,C2_0	Yes
ENSG00000102316	MAGED2	chrX:54842092-54842342	-	IR	190	Yes	-	protein_coding	no_known_ss	250	-	No	No	No	bcc_24839|Cycle_0|Type_1	31,29	54842123,54842314	psi1:0.290322580645,psi2:0.367346938776	C1_27,C2_18	C1_66,C2_31	(AG:54842314,GT:54842123)
ENSG00000179912	R3HDM2	chr12:57690303-57691903	-	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,60,31	57690334,57691111,57691170,57691873	No	No	No	bcc_22797|Cycle_0|Type_1	31,31	57690334,57691873	psi1:0.977777777778,psi2:1.0	C1_44,C2_17	C1_1,C2_0	Yes
ENSG00000167797	CDK2AP2	chr11:67275129-67275501	-	altD	141	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,171	67275160,67275331	No	No	No	bcc_60482|Cycle_0|Type_1	31,30	67275160,67275472	psi1:0.25,psi2:0.366666666667	C1_1,C2_11	C1_3,C2_19	Yes
ENSG00000165688	PMPCA	chr9:139313341-139316313	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,63,30	139313370,139313496,139313558,139316284	No	No	No	bcc_16573|Cycle_0|Type_1	29,30	139313370,139316284	psi1:1.0,psi2:0.962264150943	C1_10,C2_51	C1_0,C2_2	Yes
ENSG00000105429	MEGF8	chr19:42874952-42879689	+	ES	133	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,133,31	42874983,42875502,42875634,42879659	No	No	No	bcc_70555|Cycle_0|Type_1	31,31	42874983,42879659	psi1:0.555555555556,psi2:0.666666666667	C1_10,C2_2	C1_8,C2_1	Yes
ENSG00000112249	ASCC3	chr6:100960651-100964086	-	altA	115	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):100964056,100960794	143,31	100960794,100964056	No	No	No	bcc_45191|Cycle_0|Type_1	28,31	100960679,100964056	psi1:0.923076923077,psi2:0.96	C1_12,C2_24	C1_1,C2_1	Yes
ENSG00000157954	WIPI2	chr7:5269305-5270495	+	altD	33	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	64,30	5269369,5270466	No	No	No	bcc_32578|Cycle_0|Type_1	31,30	5269336,5270466	psi1:0.62962962963,psi2:0.705882352941	C1_17,C2_12	C1_10,C2_5	Yes
ENSG00000196369	SRGAP2B	chr1:143916279-144094388	+	ES_MULTI	356	Yes	-	pseudogene	all_splice_sites_known_(6_ss)	29,193,163,27	143916308,144013901,144014093,144053506,144053668,144094362	No	No	No	bcc_102|Cycle_2|Type_1	29,27	143916308,144094362	psi1:0.959595959596,psi2:1.0	C1_95,C2_17	C1_4,C2_0	Yes
ENSG00000177575	CD163	chr12:7632480-7633787	-	altA	83	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	112,31	7632592,7633757	No	No	No	bcc_53167|Cycle_0|Type_1	29,31	7632509,7633757	psi1:0.451612903226,psi2:0.550387596899	C1_14,C2_71	C1_17,C2_58	Yes
ENSG00000122490	PQLC1	chr18:77664154-77703358	-	ES_MULTI	355	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	29,217,84,54,30	77664183,77679184,77679400,77690228,77690311,77693969,77694022,77703329	No	Yes	No	bcc_20391|Cycle_4|Type_1	29,30	77664183,77703329	psi1:1.0,psi2:0.957746478873	C1_23,C2_136	C1_0,C2_6	Yes
ENSG00000144283	PKP4	chr2:159477903-159481664	+	altA	247	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,275	159477933,159481390	No	Yes	No	bcc_62110|Cycle_2|Type_1	30,28	159477933,159481637	psi1:0.96,psi2:1.0	C1_96,C2_17	C1_4,C2_0	Yes
ENSG00000164683	HEY1	chr8:80678936-80679273	-	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,42	80678967,80679232	No	No	No	bcc_69007|Cycle_0|Type_1	31,30	80678967,80679244	psi1:0.161290322581,psi2:0	C1_5,C2_0	C1_26,C2_1	Yes
ENSG00000115355	CCDC88A	chr2:55529177-55535975	-	ES	84	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,84,31	55529208,55530205,55530288,55535945	No	No	No	bcc_39705|Cycle_0|Type_1	31,31	55529208,55535945	psi1:0.838709677419,psi2:1.0	C1_26,C2_1	C1_5,C2_0	Yes
ENSG00000145730	PAM	chr5:102355516-102360865	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	102355547,102360835	No	Yes	No	bcc_49320|Cycle_8|Type_1	31,28	102355547,102360838	psi1:0.9,psi2:1.0	C1_63,C2_4	C1_7,C2_0	Yes
ENSG00000132640	BTBD3	chr20:11899218-11900396	+	ES	91	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,91,31	11899249,11899734,11899824,11900366	No	No	No	bcc_44460|Cycle_0|Type_1	31,31	11899249,11900366	psi1:0.934579439252,psi2:1.0	C1_100,C2_10	C1_7,C2_0	Yes
ENSG00000136100	VPS36	chr13:52992160-53000097	-	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,66,31	52992191,52997709,52997774,53000067	No	No	No	bcc_36988|Cycle_1|Type_1	31,31	52992191,53000067	psi1:0.916666666667,psi2:0.954545454545	C1_22,C2_21	C1_2,C2_1	Yes
ENSG00000117155	SSX2IP	chr1:85116179-85121545	-	ES	115	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,115,31	85116210,85117566,85117680,85121515	No	No	No	bcc_47252|Cycle_0|Type_1	31,31	85116210,85121515	psi1:0.961538461538,psi2:1.0	C1_50,C2_9	C1_2,C2_0	Yes
ENSG00000072736	NFATC3	chr16:68225647-68260282	+	ES	104	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,104,30	68225678,68248232,68248335,68260253	No	No	No	bcc_21580|Cycle_0|Type_1	31,30	68225678,68260253	psi1:0.333333333333,psi2:0.21875	C1_1,C2_7	C1_2,C2_25	Yes
ENSG00000016864	GLT8D1	chr3:52729021-52729234	-	IR	154	Yes	Yes	protein_coding	no_known_ss	213	-	No	No	No	bcc_34195|Cycle_0|Type_1	30,29	52729051,52729206	psi1:0.333333333333,psi2:0.25	C1_8,C2_23	C1_16,C2_69	Yes
ENSG00000017260	ATP2C1	chr3:130718472-130735026	+	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,125,31	130718503,130720064,130720188,130734996	No	Yes	No	bcc_27727|Cycle_0|Type_1	31,31	130718503,130734996	psi1:0.964285714286,psi2:0.93023255814	C1_81,C2_40	C1_3,C2_3	Yes
ENSG00000168958	MFF	chr2:228205065-228211972	+	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,75,31	228205096,228207461,228207535,228211942	No	Yes	No	bcc_45905|Cycle_12|Type_1	31,31	228205096,228211942	psi1:0.271186440678,psi2:0.346153846154	C1_16,C2_9	C1_43,C2_17	Yes
ENSG00000115504	EHBP1	chr2:63221072-63223808	+	altD	9	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):63221112,63223778	40,31	63221112,63223778	No	No	No	bcc_45999|Cycle_0|Type_1	31,31	63221103,63223778	psi1:0.88679245283,psi2:0.933333333333	C1_47,C2_28	C1_6,C2_2	Yes
ENSG00000104419	NDRG1	chr8:134266809-134269050	-	altD	51	No	-	protein_coding	2_ss_annotated_(over_3_ss):134269020,134266838	29,82	134266838,134268969	No	No	No	bcc_51454|Cycle_0|Type_1	29,31	134266838,134269020	psi1:0.121951219512,psi2:0.0588235294118	C1_10,C2_1	C1_72,C2_16	Yes
ENSG00000168894	RNF181	chr2:85823741-85824009	+	altA	35	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,65	85823772,85823945	No	No	No	bcc_56081|Cycle_0|Type_1	31,30	85823772,85823980	psi1:0.940298507463,psi2:0.972222222222	C1_63,C2_175	C1_4,C2_5	Yes
ENSG00000135535	CD164	chr6:109690192-109697307	-	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,57,31	109690220,109691614,109691670,109697277	No	No	No	bcc_40482|Cycle_0|Type_1	28,31	109690220,109697277	psi1:0.9,psi2:0.947643979058	C1_36,C2_181	C1_4,C2_10	Yes
ENSG00000102882	MAPK3	chr16:30128294-30129021	-	ES	132	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,132,31	30128324,30128475,30128606,30128991	No	No	No	bcc_64622|Cycle_0|Type_1	30,31	30128324,30128991	psi1:0.972222222222,psi2:1.0	C1_175,C2_45	C1_5,C2_0	Yes
ENSG00000182979	MTA1	chr14:105930453-105930830	+	altA	47	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,78	105930484,105930753	No	No	No	bcc_58420|Cycle_0|Type_1	31,31	105930484,105930800	psi1:0.818181818182,psi2:0.75	C1_9,C2_3	C1_2,C2_1	Yes
ENSG00000137693	YAP1	chr11:102076775-102094380	+	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	42,28	102076817,102094353	No	Yes	No	bcc_39903|Cycle_0|Type_1	30,28	102076805,102094353	psi1:0.25,psi2:0.333333333333	C1_3,C2_1	C1_9,C2_2	Yes
ENSG00000116209	TMEM59	chr1:54506479-54507427	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):54507397,54506510	34,31	54506513,54507397	No	No	No	bcc_39598|Cycle_0|Type_1	31,31	54506510,54507397	psi1:0.234782608696,psi2:0.313782991202	C1_27,C2_107	C1_88,C2_234	Yes
ENSG00000188529	SRSF10	chr1:24298082-24298370	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,31	24298116,24298340	No	No	No	bcc_17436|Cycle_0|Type_1	31,31	24298113,24298340	psi1:0.658536585366,psi2:0.583333333333	C1_27,C2_14	C1_14,C2_10	Yes
ENSG00000033627	ATP6V0A1	chr17:40622205-40629706	+	altA	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,50	40622236,40629657	No	No	No	bcc_26453|Cycle_0|Type_1	31,29	40622236,40629678	psi1:0.22972972973,psi2:0.125	C1_17,C2_1	C1_57,C2_7	Yes
ENSG00000169241	SLC50A1	chr1:155108822-155110067	+	ES	124	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,124,31	155108852,155109304,155109427,155110037	No	No	No	bcc_25435|Cycle_0|Type_1	30,31	155108852,155110037	psi1:0.714285714286,psi2:0.793103448276	C1_5,C2_23	C1_2,C2_6	Yes
ENSG00000136521	NDUFB5	chr3:179322696-179334799	+	ES_MULTI	156	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,89,67,29	179322727,179332759,179332847,179333771,179333837,179334771	No	No	No	bcc_17784|Cycle_0|Type_1	31,29	179322727,179334771	psi1:0.950920245399,psi2:0.978873239437	C1_155,C2_139	C1_8,C2_3	Yes
ENSG00000266086	RP11-159D12.5	chr17:56081332-56082312	-	IR	921	No	Yes	protein_coding	no_known_ss	980	-	No	No	No	bcc_5528|Cycle_0|Type_1	30,29	56081362,56082284	psi1:0.980716253444,psi2:0.99604743083	C1_356,C2_504	C1_7,C2_2	Yes
ENSG00000157637	SLC38A10	chr17:79219939-79220715	-	altA	504	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):79220473,79220685	534,31	79220473,79220685	No	No	No	bcc_56913|Cycle_2|Type_1	30,31	79219969,79220685	psi1:1.0,psi2:0.965811965812	C1_22,C2_113	C1_0,C2_4	Yes
ENSG00000122566	HNRNPA2B1	chr7:26231928-26232144	-	altAD	155	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):26232115,26231958	53,162	26231981,26231983	No	Yes	No	bcc_6802|Cycle_2|Type_1	30,30	26231958,26232115	psi1:0.108490566038,psi2:0.064	C1_69,C2_24	C1_567,C2_351	(AC:26232115,CT:26231958);-
ENSG00000132716	DCAF8	chr1:160210130-160231104	-	ES	75	No	-	protein_coding	all_splice_sites_known_(4_ss)	30,75,30	160210160,160213750,160213824,160231075	No	No	No	bcc_43384|Cycle_0|Type_1	30,30	160210160,160231075	psi1:0.857142857143,psi2:0.8	C1_30,C2_16	C1_5,C2_4	Yes
ENSG00000047849	MAP4	chr3:47969810-48019384	-	ES	36	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):47969840,48019355	30,36,30	47969840,47981989,47982024,48019355	No	No	No	bcc_6468|Cycle_0|Type_1	30,30	47969840,48019355	psi1:0.0660377358491,psi2:0	C1_7,C2_0	C1_99,C2_9	Yes
ENSG00000091409	ITGA6	chr2:173362802-173368848	+	ES	130	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	26,130,30	173362828,173366500,173366629,173368819	No	No	No	bcc_35792|Cycle_0|Type_1	26,30	173362828,173368819	psi1:0.96875,psi2:0.9375	C1_31,C2_15	C1_1,C2_1	Yes
ENSG00000116754	SRSF11	chr1:70716155-70716324	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	70716186,70716291	No	No	No	bcc_35875|Cycle_1|Type_1	31,31	70716186,70716294	psi1:0.645454545455,psi2:0.777777777778	C1_142,C2_14	C1_78,C2_4	Yes
ENSG00000085832	EPS15	chr1:51912746-51926793	-	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,31	51912777,51913718,51913807,51926763	No	No	No	bcc_28874|Cycle_0|Type_1	31,31	51912777,51926763	psi1:0.96875,psi2:1.0	C1_62,C2_13	C1_2,C2_0	Yes
ENSG00000076864	RAP1GAP	chr1:21924507-21924923	-	altA	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	50,31	21924557,21924893	No	No	No	bcc_58879|Cycle_0|Type_1	26,31	21924533,21924893	psi1:0.823529411765,psi2:0.75	C1_14,C2_3	C1_3,C2_1	Yes
ENSG00000214855	APOC1P1	chr19:45430260-45434286	+	ES	136	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	30,136,30	45430290,45431052,45431187,45434257	No	No	No	bcc_68878|Cycle_0|Type_1	30,30	45430290,45434257	psi1:1.0,psi2:0.77358490566	C1_1,C2_41	C1_0,C2_12	Yes
ENSG00000106565	TMEM176B	chr7:150493634-150497415	-	ES_altAD	8	Yes	-	protein_coding	4_ss_annotated_(over_6_ss):150493665,150497379,150497386,150493662	31,4,31	150493665,150497379,150497382,150497385	No	No	No	bcc_10599|Cycle_0|Type_1	28,30	150493662,150497386	psi1:0,psi2:0.111940298507	C1_0,C2_15	C1_6,C2_119	(AC:150497386,CT:150493662);(CT:150497379,CC:150493665);(CA:150497385,CA:150497382)
ENSG00000141576	RNF157	chr17:74169841-74236264	-	ES	119	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,119,31	74169871,74208445,74208563,74236234	No	No	No	bcc_14185|Cycle_0|Type_1	30,31	74169871,74236234	psi1:0.926829268293,psi2:1.0	C1_38,C2_3	C1_3,C2_0	Yes
ENSG00000112715	VEGFA	chr6:43746624-43749723	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,31	43746655,43748469,43748522,43749693	No	Yes	No	bcc_39955|Cycle_3|Type_1	31,31	43746655,43749693	psi1:0.25,psi2:0.333333333333	C1_2,C2_10	C1_6,C2_20	Yes
ENSG00000160691	SHC1	chr1:154938525-154938668	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	154938556,154938638	No	No	No	bcc_52016|Cycle_0|Type_1	28,31	154938553,154938638	psi1:0.666666666667,psi2:0.769230769231	C1_4,C2_40	C1_2,C2_12	Yes
ENSG00000088986	DYNLL1	chr12:120933989-120934248	+	altA	14	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,44	120934019,120934205	No	No	No	bcc_50979|Cycle_0|Type_1	30,30	120934019,120934219	psi1:0.0344827586207,psi2:0.0769230769231	C1_1,C2_7	C1_28,C2_84	Yes
ENSG00000129691	ASH2L	chr8:37968321-37976816	+	ES_MULTI	286	Yes	Yes	protein_coding	9_ss_annotated_(over_10_ss):37974243,37972518,37972423,37976788,37974168,37974970,37971805,37971710,37968351	30,96,96,76,18,29	37968351,37971710,37971805,37972423,37972518,37974168,37974243,37974970,37974987,37976788	No	Yes	No	bcc_36186|Cycle_3|Type_1	30,29	37968351,37976788	psi1:0.978260869565,psi2:1.0	C1_90,C2_29	C1_2,C2_0	Yes
ENSG00000132305	IMMT	chr2:86397935-86398358	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,28	86397967,86398331	No	No	No	bcc_50912|Cycle_0|Type_1	29,28	86397964,86398331	psi1:0.733333333333,psi2:0.666666666667	C1_11,C2_10	C1_4,C2_5	Yes
ENSG00000086102	NFX1	chr9:33332469-33338536	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):33338508,33332500	31,32	33332500,33338505	No	No	No	bcc_27306|Cycle_0|Type_1	31,29	33332500,33338508	psi1:0.285714285714,psi2:0.222222222222	C1_2,C2_2	C1_5,C2_7	Yes
ENSG00000104325	DECR1	chr8:91013759-91031166	+	ES	203	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,203,30	91013789,91029352,91029554,91031137	No	Yes	Yes	bcc_51383|Cycle_1|Type_1	30,30	91013789,91031137	psi1:0.986842105263,psi2:0.950331125828	C1_75,C2_287	C1_1,C2_15	Yes
ENSG00000047849	MAP4	chr3:47894397-47896767	-	ES	190	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,190,30	47894428,47894653,47894842,47896738	No	Yes	No	bcc_6457|Cycle_2|Type_1	31,30	47894428,47896738	psi1:0.967479674797,psi2:1.0	C1_119,C2_23	C1_4,C2_0	Yes
ENSG00000186577	C6orf1	chr6:34214923-34215546	-	altD	60	No	-	protein_coding	all_splice_sites_known_(5_ss)	3,26,89	34214926,34215244,34215269,34215458	No	No	No	bcc_67832|Cycle_0|Type_1	3,26,29	34214926,34215244,34215269,34215518	psi1:0.9,psi2:1.0	C1_18,C2_1	C1_2,C2_0	Yes
ENSG00000114439	BBX	chr3:107510115-107517476	+	altA	78	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,107	107510146,107517370	No	No	No	bcc_49359|Cycle_0|Type_1	31,29	107510146,107517448	psi1:0.9,psi2:1.0	C1_18,C2_1	C1_2,C2_0	Yes
ENSG00000164327	RICTOR	chr5:38945702-38947396	-	ES_altA	181	Yes	Yes	protein_coding	4_ss_annotated_(over_5_ss):38945826,38947366,38946570,38946654	124,85,31	38945826,38946570,38946654,38947366	No	No	No	bcc_46231|Cycle_0|Type_1	28,31	38945730,38947366	psi1:0.947368421053,psi2:1.0	C1_36,C2_4	C1_2,C2_0	Yes
ENSG00000163930	BAP1	chr3:52442063-52443599	-	ES	133	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,133,30	52442093,52442490,52442622,52443570	No	No	No	bcc_58468|Cycle_0|Type_1	30,30	52442093,52443570	psi1:0.967391304348,psi2:1.0	C1_89,C2_17	C1_3,C2_0	Yes
ENSG00000125970	RALY	chr20:32661410-32663706	+	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,48,27	32661441,32661625,32661672,32663680	No	No	No	bcc_8703|Cycle_0|Type_1	31,27	32661441,32663680	psi1:0.785714285714,psi2:0.842105263158	C1_11,C2_16	C1_3,C2_3	Yes
ENSG00000114416	FXR1	chr3:180688115-180693939	+	ES	92	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,92,30	180688146,180693101,180693192,180693910	No	No	No	bcc_46120|Cycle_0|Type_1	31,30	180688146,180693910	psi1:0.3,psi2:0.368421052632	C1_15,C2_21	C1_35,C2_36	Yes
ENSG00000158985	CDC42SE2	chr5:130599829-130694931	+	ES	169	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,169,30	130599859,130651669,130651837,130694902	No	No	No	bcc_16722|Cycle_0|Type_1	30,30	130599859,130694902	psi1:0.95652173913,psi2:1.0	C1_110,C2_15	C1_5,C2_0	Yes
ENSG00000171067	C11orf24	chr11:68029162-68030228	-	IR	1005	No	Yes	protein_coding	no_known_ss	1066	-	No	No	No	bcc_7859|Cycle_3|Type_1	31,30	68029193,68030199	psi1:0.896551724138,psi2:0.942148760331	C1_52,C2_228	C1_6,C2_14	Yes
ENSG00000117114	LPHN2	chr1:82451011-82456103	+	ES	53	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,53,29	82451039,82452973,82453025,82456075	No	No	No	bcc_41656|Cycle_0|Type_1	28,29	82451039,82456075	psi1:0.5,psi2:0.657894736842	C1_1,C2_25	C1_1,C2_13	Yes
ENSG00000166197	NOLC1	chr10:103916800-103916976	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	103916831,103916943	No	No	No	bcc_7133|Cycle_0|Type_1	31,31	103916831,103916946	psi1:0.653846153846,psi2:0.727272727273	C1_17,C2_8	C1_9,C2_3	Yes
ENSG00000108669	CYTH1	chr17:76698295-76704308	-	ES	67	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,67,30	76698322,76698620,76698686,76704279	No	No	No	bcc_34128|Cycle_0|Type_1	27,30	76698322,76704279	psi1:0.948051948052,psi2:1.0	C1_73,C2_8	C1_4,C2_0	Yes
ENSG00000186480	INSIG1	chr7:155094525-155099980	+	ES	71	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,71,30	155094556,155095535,155095605,155099951	No	No	No	bcc_22804|Cycle_0|Type_1	31,30	155094556,155099951	psi1:0.0888888888889,psi2:0.194594594595	C1_4,C2_108	C1_41,C2_447	Yes
ENSG00000083544	TDRD3	chr13:61141753-61147778	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,32	61141784,61147747	No	No	No	bcc_29340|Cycle_0|Type_1	31,29	61141784,61147750	psi1:0.642857142857,psi2:0.714285714286	C1_9,C2_5	C1_5,C2_2	Yes
ENSG00000123200	ZC3H13	chr13:46539535-46541669	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	46539567,46541639	No	No	No	bcc_39008|Cycle_0|Type_1	29,31	46539564,46541639	psi1:0.595238095238,psi2:0.521739130435	C1_25,C2_12	C1_17,C2_11	Yes
ENSG00000063245	EPN1	chr19:56204132-56204347	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,31	56204162,56204317	No	No	No	bcc_58666|Cycle_0|Type_1	30,28	56204162,56204320	psi1:0.571428571429,psi2:0.652173913043	C1_4,C2_15	C1_3,C2_8	Yes
ENSG00000119487	MAPKAP1	chr9:128420051-128469280	-	ES_MULTI	418	Yes	-	protein_coding	all_splice_sites_known_(6_ss)	27,90,328,31	128420078,128432097,128432186,128434595,128434922,128469250	No	No	No	bcc_40798|Cycle_0|Type_1	27,31	128420078,128469250	psi1:1.0,psi2:0.989361702128	C1_80,C2_93	C1_0,C2_1	Yes
ENSG00000239779	WBP1	chr2:74686648-74686800	+	altD	10	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	41,31	74686689,74686770	No	Yes	No	bcc_63203|Cycle_2|Type_1	31,31	74686679,74686770	psi1:0.647058823529,psi2:0.5	C1_22,C2_1	C1_12,C2_1	Yes
ENSG00000106723	SPIN1	chr9:91063873-91083317	+	ES	254	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,254,31	91063904,91077411,91077664,91083287	No	No	No	bcc_15805|Cycle_0|Type_1	31,31	91063904,91083287	psi1:0.961240310078,psi2:1.0	C1_124,C2_18	C1_5,C2_0	Yes
ENSG00000112877	CEP72	chr5:661370-661464	+	deletion	36	No	-	protein_coding	no_known_ss	94	661370	No	Yes	No	bcc_7779|Cycle_1|Type_1	27,31	661397,661434	psi1:0.614173228346,psi2:1.0	C1_234,C2_3	C1_147,C2_0	-
ENSG00000100897	DCAF11	chr14:24584571-24584779	-	IR	150	No	-	protein_coding	no_known_ss	208	-	No	No	No	bcc_22731|Cycle_0|Type_1	30,28	24584601,24584752	psi1:1.0,psi2:0.949494949495	C1_10,C2_94	C1_0,C2_5	(AG:24584752,GT:24584601)
ENSG00000048162	NOP16	chr5:175811255-175812252	-	altA	91	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	120,31	175811375,175812222	No	Yes	No	bcc_56016|Cycle_3|Type_1	29,31	175811284,175812222	psi1:0.75,psi2:0.826086956522	C1_6,C2_38	C1_2,C2_8	Yes
ENSG00000087884	AAMDC	chr11:77553643-77583249	+	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,96,29	77553674,77580768,77580863,77583221	No	No	No	bcc_9598|Cycle_0|Type_1	31,29	77553674,77583221	psi1:0.892857142857,psi2:0.846153846154	C1_25,C2_22	C1_3,C2_4	Yes
ENSG00000138674	SEC31A	chr4:83778887-83783717	-	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,78,31	83778917,83782784,83782861,83783687	No	Yes	No	bcc_35456|Cycle_1|Type_1	30,31	83778917,83783687	psi1:0.735294117647,psi2:0.8	C1_25,C2_12	C1_9,C2_3	Yes
ENSG00000063241	ISOC2	chr19:55966667-55967746	-	ES	210	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,210,31	55966697,55967003,55967212,55967716	No	No	No	bcc_66054|Cycle_0|Type_1	30,31	55966697,55967716	psi1:1.0,psi2:0.951612903226	C1_13,C2_118	C1_0,C2_6	Yes
ENSG00000133424	LARGE	chr22:33733758-33780207	-	ES	126	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,126,30	33733787,33777905,33778030,33780178	No	No	No	bcc_46929|Cycle_0|Type_1	29,30	33733787,33780178	psi1:0.945454545455,psi2:1.0	C1_52,C2_5	C1_3,C2_0	Yes
ENSG00000057608	GDI2	chr10:5827982-5838755	-	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,135,30	5828013,5836848,5836982,5838726	No	No	No	bcc_1846|Cycle_0|Type_1	31,30	5828013,5838726	psi1:0.987603305785,psi2:0.967567567568	C1_239,C2_179	C1_3,C2_6	Yes
ENSG00000154144	TBRG1	chr11:124495768-124496828	+	altA	91	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,120	124495799,124496709	No	No	No	bcc_16960|Cycle_0|Type_1	31,29	124495799,124496800	psi1:0.666666666667,psi2:0.75	C1_12,C2_3	C1_6,C2_1	Yes
ENSG00000126432	PRDX5	chr11:64085827-64088159	+	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,135,27	64085858,64087206,64087340,64088133	No	Yes	No	bcc_62015|Cycle_0|Type_1	31,27	64085858,64088133	psi1:0.981029810298,psi2:0.957446808511	C1_362,C2_315	C1_7,C2_14	Yes
ENSG00000075790	BCAP29	chr7:107253846-107258801	+	ES	79	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,79,29	107253877,107254099,107254177,107258773	No	No	No	bcc_35927|Cycle_0|Type_1	31,29	107253877,107258773	psi1:0.166666666667,psi2:0.222222222222	C1_10,C2_8	C1_50,C2_28	Yes
ENSG00000100897	DCAF11	chr14:24584904-24586208	+	altA	55	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,83	24584935,24586126	No	Yes	No	bcc_22732|Cycle_0|Type_1	31,28	24584935,24586181	psi1:0.95652173913,psi2:0.916666666667	C1_22,C2_55	C1_1,C2_5	Yes
ENSG00000126524	SBDS	chr7:66458373-66459237	-	altD	8	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,39	66458404,66459199	No	Yes	No	bcc_44738|Cycle_1|Type_1	31,31	66458404,66459207	psi1:0.916398713826,psi2:0.961538461538	C1_285,C2_75	C1_26,C2_3	Yes
ENSG00000177410	ZFAS1	chr20:47895714-47905612	+	ES_MULTI	148	Yes	-	antisense	all_splice_sites_known_(6_ss)	31,86,62,31	47895745,47897022,47897107,47897440,47897501,47905582	No	Yes	No	bcc_56508|Cycle_1|Type_1	31,31	47895745,47905582	psi1:0.906542056075,psi2:0.854545454545	C1_194,C2_47	C1_20,C2_8	Yes
ENSG00000135847	ACBD6	chr1:180283829-180471209	-	ES_MULTI	441	No	Yes	protein_coding	all_splice_sites_known_(12_ss)	28,90,106,83,97,65,30	180283857,180366651,180366740,180382501,180382606,180399315,180399397,180461404,180461500,180464596,180464660,180471180	No	No	No	bcc_56884|Cycle_0|Type_1	28,30	180283857,180471180	psi1:0.985815602837,psi2:1.0	C1_139,C2_69	C1_2,C2_0	Yes
ENSG00000085760	MTIF2	chr2:55494740-55495816	-	altD	72	No	-	protein_coding	2_ss_annotated_(over_3_ss):55495714,55494771	31,103	55494771,55495714	No	No	No	bcc_7936|Cycle_0|Type_1	31,31	55494771,55495786	psi1:0.9,psi2:0.9375	C1_9,C2_15	C1_1,C2_1	Yes
ENSG00000111142	METAP2	chr12:95868075-95869876	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,30	95868106,95869847	No	No	No	bcc_44969|Cycle_0|Type_1	31,27	95868106,95869850	psi1:0.9,psi2:0.9375	C1_18,C2_30	C1_2,C2_2	Yes
ENSG00000075413	MARK3	chr14:103946796-103969247	+	ES	258	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,258,29	103946827,103958114,103958371,103969219	No	No	No	bcc_52424|Cycle_1|Type_1	31,29	103946827,103969219	psi1:0.981481481481,psi2:0.958333333333	C1_53,C2_46	C1_1,C2_2	Yes
ENSG00000100029	PES1	chr22:30974955-30975154	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,31	30974985,30975124	No	No	No	bcc_54369|Cycle_0|Type_1	27,31	30974982,30975124	psi1:0.875,psi2:0.92	C1_42,C2_23	C1_6,C2_2	Yes
ENSG00000134283	PPHLN1	chr12:42729749-42748993	+	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,165,31	42729776,42745687,42745851,42748963	No	No	No	bcc_11615|Cycle_0|Type_1	27,31	42729776,42748963	psi1:0.666666666667,psi2:0.588235294118	C1_40,C2_10	C1_20,C2_7	Yes
ENSG00000122490	PQLC1	chr18:77664154-77703358	-	ES_MULTI	271	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,217,54,30	77664183,77679184,77679400,77693969,77694022,77703329	No	Yes	No	bcc_20391|Cycle_3|Type_1	29,30	77664183,77703329	psi1:1.0,psi2:0.961038961039	C1_20,C2_148	C1_0,C2_6	Yes
ENSG00000161939,ENSG00000258315	RNASEK-C17orf49,C17orf49	chr17:6919974-6920605	+	ES	105	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,105,30	6920004,6920229,6920333,6920576	No	No	No	bcc_62306|Cycle_1|Type_1	30,30	6920004,6920576	psi1:0.916666666667,psi2:0.875	C1_33,C2_21	C1_3,C2_3	Yes
ENSG00000170581	STAT2	chr12:56749547-56749946	-	altA	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	40,31	56749587,56749916	No	No	No	bcc_14476|Cycle_0|Type_1	28,31	56749575,56749916	psi1:0.785714285714,psi2:0.84	C1_11,C2_21	C1_3,C2_4	Yes
ENSG00000085415	SEH1L	chr18:12951873-12963188	+	ES	147	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,147,30	12951904,12955462,12955608,12963159	No	No	No	bcc_31321|Cycle_0|Type_1	31,30	12951904,12963159	psi1:0.932203389831,psi2:0.965517241379	C1_55,C2_28	C1_4,C2_1	Yes
ENSG00000115875	SRSF7	chr2:38975766-38976699	-	altA	693	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	722,29	38976488,38976671	No	Yes	No	bcc_31545|Cycle_3|Type_1	29,29	38975795,38976671	psi1:0.471698113208,psi2:0.539215686275	C1_50,C2_55	C1_56,C2_47	Yes
ENSG00000188690	UROS	chr10:127484726-127496010	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,81,29	127484757,127486634,127486714,127495982	No	No	No	bcc_49023|Cycle_0|Type_1	31,29	127484757,127495982	psi1:0.951310861423,psi2:0.906976744186	C1_254,C2_39	C1_13,C2_4	(AC:127495982,CT:127484757);(GC:127486634,CT:127484757);(AC:127495982,CT:127486714)
ENSG00000166352	C11orf74	chr11:36616111-36631659	+	altD	49	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	80,29	36616191,36631631	No	No	No	bcc_53682|Cycle_0|Type_1	31,29	36616142,36631631	psi1:0.416666666667,psi2:0.5	C1_10,C2_3	C1_14,C2_3	Yes
ENSG00000131089	ARHGEF9	chrX:62926299-63005024	-	ES	180	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,180,29	62926329,62944412,62944591,63004996	No	Yes	No	bcc_9777|Cycle_0|Type_1	30,29	62926329,63004996	psi1:0.918918918919,psi2:1.0	C1_34,C2_2	C1_3,C2_0	Yes
ENSG00000175061	FAM211A-AS1	chr17:16342697-16343003	+	altA	132	No	-	processed_transcript	all_splice_sites_known_(3_ss)	31,162	16342728,16342842	No	Yes	No	bcc_27470|Cycle_5|Type_1	31,30	16342728,16342974	psi1:0.969696969697,psi2:0.938461538462	C1_32,C2_61	C1_1,C2_4	Yes
ENSG00000071994	PDCD2	chr6:170888028-170892175	-	ES	104	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,104,31	170888058,170889090,170889193,170892145	No	No	No	bcc_57785|Cycle_0|Type_1	30,31	170888058,170892145	psi1:0.916666666667,psi2:0.951612903226	C1_22,C2_59	C1_2,C2_3	Yes
ENSG00000155096	AZIN1	chr8:103842132-103845314	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):103845284,103842164	32,31	103842164,103845284	No	No	No	bcc_42857|Cycle_0|Type_1	29,31	103842161,103845284	psi1:0.920454545455,psi2:0.953846153846	C1_81,C2_62	C1_7,C2_3	Yes
ENSG00000129691	ASH2L	chr8:37968321-37976817	+	ES_MULTI	268	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	30,96,96,76,30	37968351,37971710,37971805,37972423,37972518,37974168,37974243,37976788	No	Yes	No	bcc_36186|Cycle_0|Type_1	30,30	37968351,37976788	psi1:0.983193277311,psi2:1.0	C1_117,C2_42	C1_2,C2_0	Yes
ENSG00000116750	UCHL5	chr1:192992138-192993002	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,29	192992169,192992974	No	No	No	bcc_11049|Cycle_0|Type_1	28,29	192992166,192992974	psi1:0.571428571429,psi2:0.5	C1_28,C2_11	C1_21,C2_11	Yes
ENSG00000167986	DDB1	chr11:61094336-61099044	-	ES_MULTI	339	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,222,117,30	61094365,61096835,61097056,61097430,61097546,61099015	No	No	No	bcc_27006|Cycle_0|Type_1	29,30	61094365,61099015	psi1:0.982352941176,psi2:1.0	C1_167,C2_55	C1_3,C2_0	Yes
ENSG00000073921	PICALM	chr11:85693001-85694938	-	altA	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	45,30	85693046,85694909	No	No	No	bcc_13924|Cycle_0|Type_1	30,30	85693031,85694909	psi1:0.674418604651,psi2:0.610169491525	C1_58,C2_36	C1_28,C2_23	Yes
ENSG00000164062	APEH	chr3:49719207-49719810	+	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,81,30	49719238,49719320,49719400,49719781	No	No	No	bcc_55381|Cycle_0|Type_1	31,30	49719238,49719781	psi1:1.0,psi2:0.960526315789	C1_9,C2_73	C1_0,C2_3	Yes
ENSG00000143633	C1orf131	chr1:231364923-231374633	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	231364955,231374603	No	No	No	bcc_52820|Cycle_0|Type_1	29,31	231364952,231374603	psi1:0.727272727273,psi2:0.666666666667	C1_8,C2_8	C1_3,C2_4	Yes
ENSG00000026652	AGPAT4	chr6:161574500-161587310	-	ES	162	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,162,31	161574531,161575181,161575342,161587280	No	No	No	bcc_36609|Cycle_0|Type_1	31,31	161574531,161587280	psi1:0.909090909091,psi2:1.0	C1_20,C2_1	C1_2,C2_0	Yes
ENSG00000144231	POLR2D	chr2:128608230-128615632	-	ES	181	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,181,31	128608259,128610499,128610679,128615602	No	No	No	bcc_30407|Cycle_0|Type_1	29,31	128608259,128615602	psi1:0.9,psi2:0.857142857143	C1_27,C2_24	C1_3,C2_4	Yes
ENSG00000175061	FAM211A-AS1	chr17:16343539-16344710	+	ES	57	No	-	processed_transcript	all_splice_sites_known_(4_ss)	28,57,29	16343567,16344388,16344444,16344682	No	No	No	bcc_27471|Cycle_0|Type_1	28,29	16343567,16344682	psi1:0.975609756098,psi2:0.95041322314	C1_200,C2_230	C1_5,C2_12	Yes
ENSG00000129657	SEC14L1	chr17:75210070-75212658	+	altAD	1882	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):75212631,75210101	1791,150	75211861,75212509	No	Yes	No	bcc_33961|Cycle_140|Type_1	31,28	75210101,75212631	psi1:0.973262032086,psi2:0.991769547325	C1_364,C2_241	C1_10,C2_2	Yes
ENSG00000125814	NAPB	chr20:23355424-23355488	+	deletion	3	No	-	protein_coding	no_known_ss	64	23355424	No	No	No	bcc_38029|Cycle_0|Type_1	30,31	23355454,23355458	psi1:0.582608695652,psi2:0.333333333333	C1_201,C2_2	C1_144,C2_4	-
ENSG00000129657	SEC14L1	chr17:75210070-75212658	+	ES_altAD	1882	Yes	-	protein_coding	2_ss_annotated_(over_6_ss):75210101,75212631	1739,52,150	75211809,75212132,75212183,75212509	No	Yes	No	bcc_33961|Cycle_365|Type_1	31,28	75210101,75212631	psi1:0.972826086957,psi2:0.991525423729	C1_358,C2_234	C1_10,C2_2	Yes
ENSG00000143157	POGK	chr1:166810294-166818204	+	ES_MULTI	226	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,127,99,30	166810325,166815849,166815975,166816731,166816829,166818175	No	No	No	bcc_63901|Cycle_0|Type_1	31,30	166810325,166818175	psi1:0.826923076923,psi2:0.882352941176	C1_43,C2_15	C1_9,C2_2	Yes
ENSG00000165478	HEPACAM	chr11:124792326-124792671	-	altD	156	No	-	protein_coding	2_ss_annotated_(over_3_ss):124792641,124792354	28,187	124792354,124792485	No	Yes	No	bcc_57201|Cycle_1|Type_1	28,31	124792354,124792641	psi1:0.259259259259,psi2:0	C1_21,C2_0	C1_60,C2_1	Yes
ENSG00000017260	ATP2C1	chr3:130718472-130735026	+	ES	95	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,95,31	130718503,130720064,130720158,130734996	No	Yes	No	bcc_27727|Cycle_1|Type_1	31,31	130718503,130734996	psi1:0.955882352941,psi2:0.925	C1_65,C2_37	C1_3,C2_3	Yes
ENSG00000164985	PSIP1	chr9:15471198-15472660	-	IR	1400	Yes	Yes	protein_coding	no_known_ss	1462	-	No	Yes	No	bcc_9325|Cycle_40|Type_1	31,31	15471229,15472630	psi1:0.947867298578,psi2:0.866666666667	C1_400,C2_13	C1_22,C2_2	Yes
ENSG00000118418	HMGN3	chr6:79911414-79912022	+	IR	549	No	Yes	protein_coding	no_known_ss	608	-	No	Yes	Yes	bcc_33987|Cycle_17|Type_1	29,30	79911443,79911993	psi1:0.63829787234,psi2:0.571428571429	C1_90,C2_40	C1_51,C2_30	(CT:79911443,AC:79911993)
ENSG00000129657	SEC14L1	chr17:75210070-75212658	+	ES_MULTI	1895	Yes	-	protein_coding	2_ss_annotated_(over_8_ss):75210101,75212631	1739,26,39,150	75211809,75212275,75212300,75212327,75212365,75212509	No	Yes	No	bcc_33961|Cycle_103|Type_1	31,28	75210101,75212631	psi1:0.972972972973,psi2:0.991489361702	C1_360,C2_233	C1_10,C2_2	Yes
ENSG00000129657	SEC14L1	chr17:75210070-75212658	+	altAD	1869	No	-	protein_coding	2_ss_annotated_(over_4_ss):75212631,75210101	1778,150	75211848,75212509	No	Yes	No	bcc_33961|Cycle_131|Type_1	31,28	75210101,75212631	psi1:0.973045822102,psi2:0.991525423729	C1_361,C2_234	C1_10,C2_2	Yes
ENSG00000129657	SEC14L1	chr17:75210070-75212658	+	altAD	1895	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):75212631,75210101	1791,163	75211861,75212496	No	Yes	No	bcc_33961|Cycle_142|Type_1	31,28	75210101,75212631	psi1:0.97375328084,psi2:0.991836734694	C1_371,C2_243	C1_10,C2_2	Yes
ENSG00000159884	CCDC107	chr9:35660613-35660797	+	altA	25	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):35660644,35660743	31,55	35660644,35660743	No	No	No	bcc_60920|Cycle_0|Type_1	31,30	35660644,35660768	psi1:0.928571428571,psi2:0.958333333333	C1_13,C2_23	C1_1,C2_1	Yes
ENSG00000122490	PQLC1	chr18:77664154-77703359	-	ES	217	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,217,31	77664183,77679184,77679400,77703329	No	Yes	No	bcc_20391|Cycle_2|Type_1	29,31	77664183,77703329	psi1:1.0,psi2:0.955223880597	C1_13,C2_128	C1_0,C2_6	Yes
ENSG00000123562	MORF4L2	chrX:102933518-102940127	-	altA	31	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	61,29	102933579,102940099	No	Yes	No	bcc_30877|Cycle_21|Type_1	30,29	102933548,102940099	psi1:0.931034482759,psi2:0.894736842105	C1_27,C2_17	C1_2,C2_2	Yes
ENSG00000116584	ARHGEF2	chr1:155936239-155938976	-	ES	68	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,68,30	155936270,155936611,155936678,155938947	No	No	No	bcc_61041|Cycle_0|Type_1	31,30	155936270,155938947	psi1:0.892857142857,psi2:1.0	C1_25,C2_1	C1_3,C2_0	Yes
ENSG00000102038	SMARCA1	chrX:128581180-128582340	-	altA	68	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):128581210,128581278	98,31	128581278,128582310	No	No	No	bcc_33302|Cycle_0|Type_1	30,31	128581210,128582310	psi1:0.313725490196,psi2:0.375	C1_16,C2_15	C1_35,C2_25	Yes
ENSG00000129657	SEC14L1	chr17:75210070-75212658	+	ES_altAD	1921	Yes	-	protein_coding	2_ss_annotated_(over_6_ss):75210101,75212631	1791,39,150	75211861,75212327,75212365,75212509	Yes	Yes	No	bcc_33961|Cycle_383|Type_1	31,28	75210101,75212631	psi1:0.973890339426,psi2:0.991869918699	C1_373,C2_244	C1_10,C2_2	Yes
ENSG00000129657	SEC14L1	chr17:75210070-75212658	+	ES_altAD	1908	No	-	protein_coding	2_ss_annotated_(over_6_ss):75210101,75212631	1739,65,163	75211809,75212145,75212209,75212496	No	Yes	No	bcc_33961|Cycle_133|Type_1	31,28	75210101,75212631	psi1:0.973544973545,psi2:0.991596638655	C1_368,C2_236	C1_10,C2_2	Yes
ENSG00000176894,ENSG00000256632	PXMP2,RP13-672B3.2	chr12:133272601-133281233	+	ES	120	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,120,29	133272632,133277836,133277955,133281205	No	No	No	bcc_44758|Cycle_0|Type_1	31,29	133272632,133281205	psi1:1.0,psi2:0.949367088608	C1_13,C2_150	C1_0,C2_8	Yes
ENSG00000120860	CCDC53	chr12:102433725-102437913	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	102433756,102437883	No	No	No	bcc_8079|Cycle_0|Type_1	28,31	102433753,102437883	psi1:0.848484848485,psi2:0.891304347826	C1_28,C2_41	C1_5,C2_5	Yes
ENSG00000062194	GPBP1	chr5:56531828-56542156	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,60,30	56531859,56532940,56532999,56542127	No	No	No	bcc_16021|Cycle_0|Type_1	31,30	56531859,56542127	psi1:0.318181818182,psi2:0.230769230769	C1_28,C2_3	C1_60,C2_10	Yes
ENSG00000129657	SEC14L1	chr17:75210070-75212658	+	altAD	1882	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):75210101,75212631	1778,163	75211848,75212496	No	Yes	No	bcc_33961|Cycle_134|Type_1	31,28	75210101,75212631	psi1:0.973544973545,psi2:0.991561181435	C1_368,C2_235	C1_10,C2_2	Yes
ENSG00000005194	CIAPIN1	chr16:57473176-57474714	-	altA	39	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	70,31	57473246,57474684	No	No	No	bcc_42721|Cycle_0|Type_1	31,31	57473207,57474684	psi1:0.897435897436,psi2:0.9375	C1_35,C2_15	C1_4,C2_1	Yes
ENSG00000119844	AFTPH	chr2:64812648-64819050	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	64812679,64819019	No	No	No	bcc_2223|Cycle_0|Type_1	31,29	64812679,64819022	psi1:0.692307692308,psi2:0.75	C1_9,C2_15	C1_4,C2_5	Yes
ENSG00000130988	RGN	chrX:46943968-46951489	+	ES	132	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,132,30	46943999,46951077,46951208,46951460	No	Yes	No	bcc_50212|Cycle_2|Type_1	31,30	46943999,46951460	psi1:0.933333333333,psi2:0.87898089172	C1_28,C2_138	C1_2,C2_19	Yes
ENSG00000167920	TMEM99	chr17:38990740-38991201	-	IR	400	Yes	Yes	protein_coding	no_known_ss	461	-	No	No	No	bcc_58835|Cycle_1|Type_1	31,30	38990771,38991172	psi1:1.0,psi2:0.971428571429	C1_11,C2_68	C1_0,C2_2	(AG:38991172,GT:38990771)
ENSG00000129657	SEC14L1	chr17:75210070-75212658	+	ES_altAD	1921	Yes	-	protein_coding	2_ss_annotated_(over_6_ss):75210101,75212631	1739,78,163	75211809,75212132,75212209,75212496	No	Yes	No	bcc_33961|Cycle_335|Type_1	31,28	75210101,75212631	psi1:0.973890339426,psi2:0.991666666667	C1_373,C2_238	C1_10,C2_2	Yes
ENSG00000167515	TRAPPC2L	chr16:88926349-88927349	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	88926380,88927319	No	No	No	bcc_5081|Cycle_0|Type_1	31,28	88926380,88927322	psi1:0.382352941176,psi2:0.444444444444	C1_13,C2_12	C1_21,C2_15	Yes
ENSG00000067167	TRAM1	chr8:71510458-71512282	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):71510490,71512254	32,29	71510490,71512254	No	No	No	bcc_40535|Cycle_0|Type_1	29,29	71510487,71512254	psi1:1.0,psi2:0.961240310078	C1_14,C2_124	C1_0,C2_5	Yes
ENSG00000125648	SLC25A23	chr19:6444284-6454022	-	ES	168	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,168,31	6444312,6452323,6452490,6453992	No	No	No	bcc_12850|Cycle_0|Type_1	28,31	6444312,6453992	psi1:0.888888888889,psi2:0.833333333333	C1_56,C2_10	C1_7,C2_2	Yes
ENSG00000158856	DMTN	chr8:21937949-21938652	+	ES	66	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	22,8,66,29	21937971,21938129,21938136,21938316,21938381,21938624	No	No	No	bcc_56677|Cycle_0|Type_1	22,8,29	21937971,21938129,21938136,21938624	psi1:0.664516129032,psi2:0.5625	C1_103,C2_9	C1_52,C2_7	Yes
ENSG00000114316	USP4	chr3:49315853-49318205	-	ES	89	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,89,29	49315884,49316247,49316335,49318177	No	No	No	bcc_2032|Cycle_0|Type_1	31,29	49315884,49318177	psi1:0.961538461538,psi2:0.933333333333	C1_25,C2_28	C1_1,C2_2	Yes
ENSG00000120694	HSPH1	chr13:31711224-31711535	-	IR	250	Yes	Yes	protein_coding	no_known_ss	311	-	No	No	No	bcc_26989|Cycle_0|Type_1	30,31	31711254,31711505	psi1:0.975510204082,psi2:1.0	C1_239,C2_45	C1_6,C2_0	Yes
ENSG00000147140	NONO	chrX:70503540-70510508	+	ES	57	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,57,30	70503571,70504247,70504303,70510479	No	No	No	bcc_480|Cycle_0|Type_1	31,30	70503571,70510479	psi1:0.936170212766,psi2:0.90243902439	C1_44,C2_37	C1_3,C2_4	Yes
ENSG00000143257	NR1I3	chr1:161199532-161200633	-	altA	154	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	184,31	161199716,161200603	No	No	No	bcc_35430|Cycle_0|Type_1	30,31	161199562,161200603	psi1:1.0,psi2:0.955056179775	C1_8,C2_85	C1_0,C2_4	Yes
ENSG00000219626,ENSG00000266118	FAM228B,RP11-507M3.1	chr2:24358026-24387095	+	ES_MULTI	326	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(8_ss)	31,81,88,157,28	24358057,24362240,24362320,24369618,24369705,24369800,24369956,24387068	No	Yes	No	bcc_2779|Cycle_1|Type_1	31,28	24358057,24387068	psi1:0.857142857143,psi2:1.0	C1_36,C2_1	C1_6,C2_0	Yes
ENSG00000099330	OCEL1	chr19:17337977-17339095	+	ES	166	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,166,31	17338008,17338649,17338814,17339065	No	No	No	bcc_60993|Cycle_4|Type_1	31,31	17338008,17339065	psi1:0.8,psi2:0.862068965517	C1_8,C2_50	C1_2,C2_8	Yes
ENSG00000078061	ARAF	chrX:47422332-47424743	+	ES_MULTI	525	No	Yes	protein_coding	8_ss_annotated_(over_10_ss):47424384,47422625,47424196,47422728,47424298,47424651,47424538,47422462	130,104,103,155,93	47422462,47422625,47422728,47424196,47424298,47424384,47424538,47424651	No	No	No	bcc_58991|Cycle_0|Type_1	29,31	47422361,47424713	psi1:1.0,psi2:0.98347107438	C1_36,C2_119	C1_0,C2_2	(GT:47424538,AG:47424651);(GC:47422361,CC:47424713);(GT:47424298,AG:47424384);(GT:47422728,AG:47424196);(GT:47422462,AG:47422625)
ENSG00000138709	LARP1B	chr4:128999086-129012186	+	ES	108	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):129012156,129003460,128999117	31,108,31	128999117,129003353,129003460,129012156	No	Yes	No	bcc_47505|Cycle_1|Type_1	31,31	128999117,129012156	psi1:0.857142857143,psi2:0.809523809524	C1_12,C2_17	C1_2,C2_4	Yes
ENSG00000126106	TMEM53	chr1:45120761-45125876	-	altA	90	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	120,31	45120881,45125846	No	No	No	bcc_49349|Cycle_0|Type_1	30,31	45120791,45125846	psi1:0.8,psi2:0.72131147541	C1_8,C2_44	C1_2,C2_17	Yes
ENSG00000137343	ATAT1	chr6:30608168-30609983	+	ES	69	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,69,31	30608199,30608312,30608380,30609953	No	No	No	bcc_69235|Cycle_0|Type_1	31,31	30608199,30609953	psi1:0.882352941176,psi2:1.0	C1_30,C2_1	C1_4,C2_0	Yes
ENSG00000100031	GGT1	chr22:25006272-25006448	-	IR	118	Yes	-	protein_coding	no_known_ss	176	-	No	Yes	No	bcc_22619|Cycle_1|Type_1	31,27	25006303,25006422	psi1:1.0,psi2:0.882352941176	C1_1,C2_30	C1_0,C2_4	(AG:25006422,GT:25006303)
ENSG00000112531	QKI	chr6:163983071-163984506	+	altA	21	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):163984476,163983101	30,52	163983101,163984455	No	Yes	No	bcc_703|Cycle_2|Type_1	30,31	163983101,163984476	psi1:0.213114754098,psi2:0.333333333333	C1_13,C2_1	C1_48,C2_2	Yes
ENSG00000139428	MMAB	chr12:110006639-110011181	-	ES	62	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,62,30	110006668,110009454,110009515,110011152	No	No	No	bcc_59835|Cycle_0|Type_1	29,30	110006668,110011152	psi1:1.0,psi2:0.981132075472	C1_13,C2_52	C1_0,C2_1	Yes
ENSG00000213563	C8orf82	chr8:145751995-145752374	+	IR	320	Yes	-	protein_coding	no_known_ss	379	-	No	No	No	bcc_66955|Cycle_0|Type_1	28,31	145752023,145752344	psi1:0.888888888889,psi2:0.833333333333	C1_8,C2_30	C1_1,C2_6	(CT:145752023,AC:145752344)
ENSG00000129657	SEC14L1	chr17:75210070-75212658	+	ES_altAD	1908	No	-	protein_coding	2_ss_annotated_(over_6_ss):75210101,75212631	1778,39,150	75211848,75212327,75212365,75212509	No	Yes	No	bcc_33961|Cycle_377|Type_1	31,28	75210101,75212631	psi1:0.974226804124,psi2:0.991561181435	C1_378,C2_235	C1_10,C2_2	Yes
ENSG00000159082	SYNJ1	chr21:34067563-34074300	-	ES	268	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,268,30	34067592,34072148,34072415,34074271	No	No	No	bcc_44096|Cycle_0|Type_1	29,30	34067592,34074271	psi1:0.920454545455,psi2:1.0	C1_81,C2_4	C1_7,C2_0	Yes
ENSG00000100028	SNRPD3	chr22:24953737-24967912	+	ES	193	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,193,29	24953768,24963952,24964144,24967884	No	No	No	bcc_46651|Cycle_0|Type_1	31,29	24953768,24967884	psi1:0.969230769231,psi2:0.98753117207	C1_126,C2_396	C1_4,C2_5	Yes
ENSG00000242616	GNG10	chr9:114429195-114431582	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,34	114429226,114431549	No	No	No	bcc_37519|Cycle_0|Type_1	31,31	114429226,114431552	psi1:0.7,psi2:0.642857142857	C1_21,C2_18	C1_9,C2_10	Yes
ENSG00000160948	VPS28	chr8:145650352-145651095	-	altA	51	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	82,30	145650434,145651066	No	No	No	bcc_9463|Cycle_0|Type_1	31,30	145650383,145651066	psi1:0.964912280702,psi2:0.934959349593	C1_55,C2_115	C1_2,C2_8	Yes
ENSG00000157326	DHRS4	chr14:24429181-24436449	+	ES_MULTI	258	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,71,52,135,30	24429212,24434971,24435041,24435141,24435192,24435492,24435626,24436420	No	Yes	No	bcc_47846|Cycle_2|Type_1	31,30	24429212,24436420	psi1:1.0,psi2:0.949324324324	C1_22,C2_281	C1_0,C2_15	Yes
ENSG00000140157	NIPA2	chr15:23021398-23034176	-	ES	122	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,122,30	23021429,23027801,23027922,23034147	No	No	No	bcc_37392|Cycle_0|Type_1	31,30	23021429,23034147	psi1:0.769230769231,psi2:0.714285714286	C1_10,C2_5	C1_3,C2_2	Yes
ENSG00000163349	HIPK1	chr1:114499776-114500718	+	altD	102	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	132,31	114499908,114500688	No	No	No	bcc_53610|Cycle_0|Type_1	30,31	114499806,114500688	psi1:0.95,psi2:1.0	C1_38,C2_3	C1_2,C2_0	Yes
ENSG00000063046	EIF4B	chr12:53428462-53431223	+	altD	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	46,31	53428508,53431193	No	No	No	bcc_3430|Cycle_0|Type_1	31,31	53428493,53431193	psi1:0.0955056179775,psi2:0.0579710144928	C1_17,C2_4	C1_161,C2_65	Yes
ENSG00000067606	PRKCZ	chr1:2075749-2080341	+	ES	82	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,82,31	2075780,2077466,2077547,2080311	No	No	No	bcc_50406|Cycle_2|Type_1	31,31	2075780,2080311	psi1:0.929292929293,psi2:1.0	C1_92,C2_5	C1_7,C2_0	Yes
ENSG00000151292	CSNK1G3	chr5:122924176-122926135	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,32	122924205,122926104	No	No	No	bcc_30580|Cycle_0|Type_1	29,29	122924205,122926107	psi1:0.578947368421,psi2:0.5	C1_11,C2_2	C1_8,C2_2	Yes
ENSG00000245573	BDNF-AS	chr11:27661521-27680747	+	ES	225	No	-	antisense	3_ss_annotated_(over_4_ss):27661552,27680718,27680009	31,225,30	27661552,27679785,27680009,27680718	No	Yes	No	bcc_70028|Cycle_4|Type_1	31,30	27661552,27680718	psi1:0.916666666667,psi2:1.0	C1_22,C2_1	C1_2,C2_0	Yes
ENSG00000166562	SEC11C	chr18:56823008-56825893	+	ES	58	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,58,30	56823039,56824840,56824897,56825864	No	No	No	bcc_50829|Cycle_0|Type_1	31,30	56823039,56825864	psi1:0.9336492891,psi2:0.960377358491	C1_394,C2_509	C1_28,C2_21	Yes
ENSG00000117020	AKT3	chr1:243828154-244006457	-	ES	126	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,126,31	243828185,243858893,243859018,244006427	No	No	No	bcc_56480|Cycle_3|Type_1	31,31	243828185,244006427	psi1:0.945945945946,psi2:1.0	C1_70,C2_5	C1_4,C2_0	Yes
ENSG00000128513	POT1	chr7:124467329-124475363	-	ES	89	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,89,31	124467359,124469308,124469396,124475333	No	No	No	bcc_57985|Cycle_0|Type_1	30,31	124467359,124475333	psi1:0.866666666667,psi2:0.904761904762	C1_13,C2_19	C1_2,C2_2	Yes
ENSG00000137074	APTX	chr9:32987700-32989787	-	ES_altA	162	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	140,51,31	32987840,32988077,32988127,32989757	No	No	No	bcc_54639|Cycle_1|Type_1	29,31	32987729,32989757	psi1:0.863636363636,psi2:0.818181818182	C1_19,C2_9	C1_3,C2_2	Yes
ENSG00000028203	VEZT	chr12:95660377-95663857	+	altA	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,43	95660408,95663815	No	No	No	bcc_26244|Cycle_0|Type_1	31,31	95660408,95663827	psi1:0.5625,psi2:0.625	C1_9,C2_5	C1_7,C2_3	Yes
ENSG00000168785	TSPAN5	chr4:99399866-99403186	-	altA	64	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	95,31	99399961,99403156	No	No	No	bcc_31388|Cycle_0|Type_1	31,31	99399897,99403156	psi1:0.873417721519,psi2:1.0	C1_69,C2_2	C1_10,C2_0	Yes
ENSG00000092096	SLC22A17	chr14:23816390-23816753	-	altD	54	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,85	23816421,23816669	No	No	No	bcc_12580|Cycle_0|Type_1	31,31	23816421,23816723	psi1:0.244444444444,psi2:0	C1_22,C2_0	C1_68,C2_1	Yes
ENSG00000114942	EEF1B2	chr2:207024378-207024711	+	altA	46	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,75	207024408,207024637	No	Yes	No	bcc_6298|Cycle_1|Type_1	30,29	207024408,207024683	psi1:0.928571428571,psi2:0.881355932203	C1_13,C2_52	C1_1,C2_7	Yes
ENSG00000145623	OSMR	chr5:38935384-38935445	+	deletion	3	No	-	protein_coding	no_known_ss	61	38935384	No	No	No	bcc_170|Cycle_0|Type_1	27,31	38935411,38935415	psi1:0.5,psi2:0.395348837209	C1_2,C2_17	C1_2,C2_26	-
ENSG00000176386	CDC26	chr9:116035661-116037692	-	altA	28	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):116037662,116035718	57,31	116035718,116037662	No	No	No	bcc_61553|Cycle_3|Type_1	29,31	116035690,116037662	psi1:0.904761904762,psi2:0.9375	C1_38,C2_30	C1_4,C2_2	Yes
ENSG00000175662	TOM1L2	chr17:17788051-17801939	-	ES	150	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,150,30	17788082,17796975,17797124,17801910	No	Yes	No	bcc_5714|Cycle_0|Type_1	31,30	17788082,17801910	psi1:0.9625,psi2:1.0	C1_77,C2_8	C1_3,C2_0	Yes
ENSG00000173933,ENSG00000248643	RBM4,RBM14-RBM4	chr11:66407564-66413526	+	ES	691	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,691,29	66407594,66410921,66411611,66413498	No	No	No	bcc_7490|Cycle_1|Type_1	30,29	66407594,66413498	psi1:0.905882352941,psi2:0.867924528302	C1_77,C2_92	C1_8,C2_14	Yes
ENSG00000147576	ADHFE1	chr8:67356952-67359527	+	ES	197	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,197,29	67356983,67357453,67357649,67359499	No	No	No	bcc_46360|Cycle_1|Type_1	31,29	67356983,67359499	psi1:0.96875,psi2:0.944444444444	C1_31,C2_34	C1_1,C2_2	Yes
ENSG00000066468	FGFR2	chr10:123263424-123274665	-	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,35	123263455,123274631	No	No	No	bcc_40057|Cycle_0|Type_1	31,29	123263455,123274637	psi1:0.5625,psi2:0.666666666667	C1_18,C2_2	C1_14,C2_1	(AC:123274637,CT:123263455);(TC:123274631,CT:123263455)
ENSG00000167721	TSR1	chr17:2227843-2228013	-	IR	110	Yes	Yes	protein_coding	no_known_ss	170	-	No	No	No	bcc_27111|Cycle_0|Type_1	29,31	2227872,2227983	psi1:0.5,psi2:0.441176470588	C1_16,C2_15	C1_16,C2_19	Yes
ENSG00000080822,ENSG00000080819	CLDND1,CPOX	chr3:98240256-98241723	-	ES	51	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,51,31	98240286,98240497,98240547,98241693	No	Yes	No	bcc_34239|Cycle_6|Type_1	30,31	98240286,98241693	psi1:0.510779436153,psi2:0	C1_308,C2_0	C1_295,C2_2	Yes
ENSG00000182149	IST1	chr16:71957252-71961540	+	unclassified	42	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):71958672,71958720,71957283,71961517	31,49,24	71957283,71958672,71958720,71961517	No	Yes	No	bcc_12724|Cycle_1|Type_1	31,7,24	71957283,71958714,71958720,71961517	psi1:0.904761904762,psi2:0.863636363636	C1_57,C2_19	C1_6,C2_3	Yes
ENSG00000111011	RSRC2	chr12:122992967-122995685	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,30	122992997,122995656	No	No	No	bcc_41942|Cycle_1|Type_1	27,30	122992994,122995656	psi1:0.5,psi2:0.428571428571	C1_26,C2_6	C1_26,C2_8	Yes
ENSG00000164985	PSIP1	chr9:15471198-15472660	-	altA	1317	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):15471229,15472630	1348,31	15472546,15472630	No	Yes	No	bcc_9325|Cycle_42|Type_1	31,31	15471229,15472630	psi1:0.945812807882,psi2:0.875	C1_384,C2_14	C1_22,C2_2	Yes
ENSG00000148337	CIZ1	chr9:130929414-130931383	-	altD	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,53	130929443,130931331	No	No	No	bcc_54822|Cycle_1|Type_1	29,29	130929443,130931355	psi1:0.884615384615,psi2:0.928571428571	C1_46,C2_13	C1_6,C2_1	Yes
ENSG00000257379,ENSG00000197111	RP11-793H13.8,PCBP2	chr12:53856320-53861035	+	ES	42	No	Yes	processed_transcript,protein_coding	all_splice_sites_known_(4_ss)	31,42,31	53856351,53859716,53859757,53861005	No	Yes	No	bcc_11408|Cycle_3|Type_1	31,31	53856351,53861005	psi1:0.901840490798,psi2:0.933884297521	C1_147,C2_226	C1_16,C2_16	Yes
ENSG00000105323	HNRNPUL1	chr19:41770566-41774158	+	altD	106	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	137,31	41770703,41774128	No	No	No	bcc_12459|Cycle_0|Type_1	31,31	41770597,41774128	psi1:0.810810810811,psi2:0.75	C1_30,C2_6	C1_7,C2_2	Yes
ENSG00000134717	BTF3L4	chr1:52530579-52551812	+	ES	202	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,202,29	52530610,52549012,52549213,52551784	Yes	No	No	bcc_17713|Cycle_0|Type_1	31,29	52530610,52551784	psi1:0.985781990521,psi2:0.968421052632	C1_208,C2_92	C1_3,C2_3	Yes
ENSG00000151929	BAG3	chr10:121437005-121437065	-	deletion	3	No	-	protein_coding	no_known_ss	60	121437005	No	No	No	bcc_49177|Cycle_0|Type_1	26,31	121437031,121437035	psi1:0.543859649123,psi2:0.611111111111	C1_31,C2_11	C1_26,C2_7	-
ENSG00000099256	PRTFDC1	chr10:25138790-25144277	-	ES	77	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,77,31	25138820,25140317,25140393,25144247	No	Yes	No	bcc_52581|Cycle_1|Type_1	30,31	25138820,25144247	psi1:0.92,psi2:1.0	C1_46,C2_2	C1_4,C2_0	Yes
ENSG00000048740	CELF2	chr10:11371029-11372448	-	IR	1358	Yes	-	protein_coding	no_known_ss	1419	-	No	No	No	bcc_29011|Cycle_0|Type_1	31,30	11371060,11372419	psi1:0.963636363636,psi2:1.0	C1_159,C2_16	C1_6,C2_0	(AG:11372419,GT:11371060)
ENSG00000111907	TPD52L1	chr6:125574870-125584008	+	ES	61	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,61,29	125574901,125578244,125578304,125583980	No	Yes	No	bcc_51882|Cycle_15|Type_1	31,29	125574901,125583980	psi1:0.744680851064,psi2:0.794117647059	C1_35,C2_27	C1_12,C2_7	Yes
ENSG00000077380	DYNC1I2	chr2:172602406-172604317	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	172602437,172604286	No	No	No	bcc_37334|Cycle_0|Type_1	31,29	172602437,172604289	psi1:0.955414012739,psi2:1.0	C1_150,C2_12	C1_7,C2_0	Yes
ENSG00000163539	CLASP2	chr3:33626381-33633917	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,31	33626412,33633705,33633731,33633887	No	No	No	bcc_23695|Cycle_0|Type_1	31,31	33626412,33633887	psi1:0.121951219512,psi2:0	C1_5,C2_0	C1_36,C2_1	Yes
ENSG00000167110	GOLGA2	chr9:131028574-131029766	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,81,30	131028604,131029473,131029553,131029737	No	No	No	bcc_60814|Cycle_0|Type_1	30,30	131028604,131029737	psi1:0.777777777778,psi2:0.823529411765	C1_14,C2_14	C1_4,C2_3	Yes
ENSG00000174827	PDZK1	chr1:145756582-145761207	+	ES_MULTI	113	Yes	Yes	protein_coding	2_ss_annotated_(over_6_ss):145756613,145761178	31,56,57,30	145756613,145758846,145758901,145760733,145760789,145761178	Yes	Yes	No	bcc_43945|Cycle_0|Type_1	31,30	145756613,145761178	psi1:0,psi2:0.166666666667	C1_0,C2_10	C1_1,C2_50	Yes
ENSG00000137806	NDUFAF1	chr15:41689308-41694485	-	altD	116	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,144	41689338,41694342	No	No	No	bcc_51083|Cycle_0|Type_1	30,28	41689338,41694458	psi1:0.923076923077,psi2:0.888888888889	C1_12,C2_16	C1_1,C2_2	Yes
ENSG00000162929	KIAA1841	chr2:61372300-61390006	+	ES	151	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,151,30	61372331,61384997,61385147,61389977	No	No	No	bcc_49452|Cycle_1|Type_1	31,30	61372331,61389977	psi1:0.571428571429,psi2:0.666666666667	C1_16,C2_2	C1_12,C2_1	Yes
ENSG00000183172	SMDT1	chr22:42475878-42477959	+	altD	49	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	80,31	42475958,42477929	No	No	No	bcc_60066|Cycle_0|Type_1	31,31	42475909,42477929	psi1:0.913793103448,psi2:0.943181818182	C1_53,C2_83	C1_5,C2_5	Yes
ENSG00000137955	RABGGTB	chr1:76255712-76256998	+	ES_MULTI	195	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,123,72,29	76255742,76255837,76255959,76256131,76256202,76256970	No	No	No	bcc_54267|Cycle_1|Type_1	30,29	76255742,76256970	psi1:0.219512195122,psi2:0.269841269841	C1_9,C2_17	C1_32,C2_46	Yes
ENSG00000137764	MAP2K5	chr15:67855657-67878258	+	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,70,31	67855688,67873092,67873161,67878228	No	No	No	bcc_47731|Cycle_0|Type_1	31,31	67855688,67878228	psi1:0.875,psi2:0.833333333333	C1_21,C2_10	C1_3,C2_2	Yes
ENSG00000115307	AUP1	chr2:74754157-74754405	-	altA	62	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	91,31	74754248,74754375	No	No	No	bcc_54907|Cycle_0|Type_1	29,31	74754186,74754375	psi1:0.148148148148,psi2:0.096256684492	C1_4,C2_18	C1_23,C2_169	Yes
ENSG00000115226	FNDC4	chr2:27715315-27716286	-	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,125,31	27715345,27715533,27715657,27716256	No	No	No	bcc_53630|Cycle_0|Type_1	30,31	27715345,27716256	psi1:0.93137254902,psi2:0.960784313725	C1_95,C2_392	C1_7,C2_16	Yes
ENSG00000080822,ENSG00000080819	CLDND1,CPOX	chr3:98240256-98241723	-	ES	66	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,66,31	98240286,98240497,98240562,98241693	No	Yes	No	bcc_34239|Cycle_5|Type_1	30,31	98240286,98241693	psi1:0.47695035461,psi2:0	C1_269,C2_0	C1_295,C2_2	Yes
ENSG00000069974	RAB27A	chr15:55527125-55581944	-	ES	120	No	-	protein_coding	all_splice_sites_known_(4_ss)	29,120,31	55527154,55562363,55562482,55581914	No	No	No	bcc_57424|Cycle_0|Type_1	29,31	55527154,55581914	psi1:1.0,psi2:0.959183673469	C1_4,C2_47	C1_0,C2_2	Yes
ENSG00000129657	SEC14L1	chr17:75210070-75212658	+	ES_altAD	1931	Yes	-	protein_coding	2_ss_annotated_(over_6_ss):75210101,75212631	1726,114,150	75211796,75211966,75212079,75212509	No	Yes	No	bcc_33961|Cycle_359|Type_1	31,28	75210101,75212631	psi1:0.976470588235,psi2:0.991967871486	C1_415,C2_247	C1_10,C2_2	Yes
ENSG00000100852	ARHGAP5	chr14:32563561-32586377	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	32563592,32586346	No	No	No	bcc_33000|Cycle_0|Type_1	31,29	32563592,32586349	psi1:0.645161290323,psi2:0.714285714286	C1_20,C2_5	C1_11,C2_2	Yes
ENSG00000143436	MRPL9	chr1:151733344-151734611	-	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,102,31	151733375,151733927,151734028,151734581	No	Yes	No	bcc_13597|Cycle_1|Type_1	31,31	151733375,151734581	psi1:0.957446808511,psi2:0.931818181818	C1_45,C2_41	C1_2,C2_3	Yes
ENSG00000160271	RALGDS	chr9:135985043-135985713	-	altA	36	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	65,31	135985108,135985683	No	No	No	bcc_26964|Cycle_0|Type_1	29,31	135985072,135985683	psi1:0.224137931034,psi2:0.333333333333	C1_13,C2_1	C1_45,C2_2	Yes
ENSG00000081041	CXCL2	chr4:74964370-74964546	+	IR	114	No	Yes	protein_coding	no_known_ss	176	-	No	No	No	bcc_17530|Cycle_0|Type_1	31,31	74964401,74964516	psi1:0,psi2:0.193333333333	C1_0,C2_29	C1_2,C2_121	(CT:74964401,AC:74964516)
ENSG00000134910	STT3A	chr11:125478108-125479358	+	altD	46	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	76,30	125478184,125479329	No	No	No	bcc_25988|Cycle_1|Type_1	30,30	125478138,125479329	psi1:1.0,psi2:0.961904761905	C1_9,C2_101	C1_0,C2_4	Yes
ENSG00000170502	NUDT9	chr4:88356320-88359456	+	altD	21	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):88356372,88359429	52,28	88356372,88359429	No	No	No	bcc_54651|Cycle_0|Type_1	31,28	88356351,88359429	psi1:0.941176470588,psi2:0.906976744186	C1_16,C2_39	C1_1,C2_4	Yes
ENSG00000093144	ECHDC1	chr6:127636013-127648177	-	ES	53	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,53,31	127636041,127637595,127637647,127648147	No	No	No	bcc_28235|Cycle_0|Type_1	28,31	127636041,127648147	psi1:0.829787234043,psi2:0.870588235294	C1_39,C2_74	C1_8,C2_11	(GC:127648147,CT:127636041);(GC:127648147,CT:127637647);(AC:127637595,CT:127636041)
ENSG00000165949	IFI27	chr14:94577113-94578034	+	altA	34	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,64	94577143,94577971	No	Yes	No	bcc_56639|Cycle_0|Type_1	30,30	94577143,94578005	psi1:0.555555555556,psi2:0.5	C1_10,C2_9	C1_8,C2_9	Yes
ENSG00000224078	SNHG14	chr15:25339090-25342497	+	ES	202	Yes	-	processed_transcript	3_ss_annotated_(over_4_ss):25339121,25342468,25340774	31,202,30	25339121,25340774,25340975,25342468	No	Yes	No	bcc_55215|Cycle_5|Type_1	31,30	25339121,25342468	psi1:0.96,psi2:1.0	C1_24,C2_2	C1_1,C2_0	Yes
ENSG00000100211	CBY1	chr22:39066963-39069193	+	ES	119	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,119,30	39066994,39067075,39067193,39069164	No	No	No	bcc_65910|Cycle_0|Type_1	31,30	39066994,39069164	psi1:0.88,psi2:0.916666666667	C1_22,C2_11	C1_3,C2_1	Yes
ENSG00000137133	HINT2	chr9:35813112-35813293	-	altA	11	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):35813142,35813263	41,31	35813153,35813263	No	No	No	bcc_53711|Cycle_0|Type_1	30,31	35813142,35813263	psi1:0.037037037037,psi2:0.078313253012	C1_1,C2_13	C1_26,C2_153	Yes
ENSG00000075234	TTC38	chr22:46685765-46688717	+	ES	126	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,126,30	46685796,46688100,46688225,46688688	No	No	No	bcc_20422|Cycle_2|Type_1	31,30	46685796,46688688	psi1:0.5,psi2:0.358490566038	C1_1,C2_19	C1_1,C2_34	Yes
ENSG00000198728	LDB1	chr10:103868049-103868821	-	altD	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):103868080,103868786	31,36	103868080,103868786	No	No	No	bcc_1751|Cycle_0|Type_1	31,30	103868080,103868792	psi1:0.727272727273,psi2:0.666666666667	C1_8,C2_2	C1_3,C2_1	Yes
ENSG00000100600	LGMN	chr14:93170675-93176046	-	ES_MULTI	239	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,68,171,30	93170706,93170985,93171052,93172828,93172998,93176017	No	No	No	bcc_28157|Cycle_0|Type_1	31,30	93170706,93176017	psi1:1.0,psi2:0.975903614458	C1_23,C2_162	C1_0,C2_4	Yes
ENSG00000183077	AFMID	chr17:76200950-76202057	+	ES_MULTI	313	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,98,79,136,31	76200981,76201174,76201271,76201521,76201599,76201684,76201819,76202027	No	Yes	No	bcc_3143|Cycle_108|Type_1	31,31	76200981,76202027	psi1:1.0,psi2:0.908163265306	C1_3,C2_89	C1_0,C2_9	Yes
ENSG00000257379,ENSG00000197111	RP11-793H13.8,PCBP2	chr12:53858605-53861035	+	ES	42	No	Yes	processed_transcript,protein_coding	all_splice_sites_known_(4_ss)	31,42,31	53858636,53859716,53859757,53861005	No	Yes	No	bcc_11408|Cycle_2|Type_1	31,31	53858636,53861005	psi1:0.980769230769,psi2:0.961089494163	C1_153,C2_247	C1_3,C2_10	Yes
ENSG00000015479	MATR3	chr5:138658625-138661156	+	altA	144	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,172	138658656,138660985	No	No	No	bcc_25202|Cycle_0|Type_1	31,28	138658656,138661129	psi1:0.163716814159,psi2:0.234042553191	C1_74,C2_11	C1_378,C2_36	Yes
ENSG00000065054	SLC9A3R2	chr16:2087572-2087888	+	altA	33	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,62	2087601,2087827	No	No	No	bcc_770|Cycle_0|Type_1	29,29	2087601,2087860	psi1:0.913043478261,psi2:0.864864864865	C1_21,C2_96	C1_2,C2_15	Yes
ENSG00000257103	LSM14A	chr19:34699925-34706527	+	ES	177	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,177,27	34699956,34706029,34706205,34706501	No	Yes	Yes	bcc_27707|Cycle_1|Type_1	31,27	34699956,34706501	psi1:0.971428571429,psi2:0.95	C1_34,C2_38	C1_1,C2_2	Yes
ENSG00000022840	RNF10	chr12:121000842-121001178	+	altA	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,44	121000873,121001135	No	No	No	bcc_33176|Cycle_0|Type_1	31,29	121000873,121001150	psi1:0.0777777777778,psi2:0.112903225806	C1_14,C2_7	C1_166,C2_55	Yes
ENSG00000157184	CPT2	chr1:53676892-53678965	+	altD	69	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):53678936,53676991	99,30	53676991,53678936	No	No	No	bcc_1579|Cycle_0|Type_1	30,30	53676922,53678936	psi1:1.0,psi2:0.955056179775	C1_6,C2_85	C1_0,C2_4	Yes
ENSG00000023330	ALAS1	chr3:52232241-52233256	+	ES	177	No	-	protein_coding	all_splice_sites_known_(4_ss)	30,177,31	52232271,52232688,52232864,52233226	No	No	No	bcc_11038|Cycle_0|Type_1	30,31	52232271,52233226	psi1:0.416666666667,psi2:0.50495049505	C1_5,C2_51	C1_7,C2_50	Yes
ENSG00000165475	CRYL1	chr13:21006404-21063538	-	ES	162	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,162,30	21006435,21013732,21013893,21063509	No	No	No	bcc_51969|Cycle_0|Type_1	31,30	21006435,21063509	psi1:0.939024390244,psi2:0.962546816479	C1_154,C2_257	C1_10,C2_10	Yes
ENSG00000107371	EXOSC3	chr9:37780846-37783940	-	ES	152	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,152,30	37780877,37781983,37782134,37783911	No	Yes	Yes	bcc_51447|Cycle_4|Type_1	31,30	37780877,37783911	psi1:0.733333333333,psi2:0.783783783784	C1_11,C2_29	C1_4,C2_8	Yes
ENSG00000131236	CAP1	chr1:40506427-40525036	+	altD	18	No	-	protein_coding	all_splice_sites_known_(3_ss)	46,28	40506473,40525009	No	Yes	No	bcc_22511|Cycle_1|Type_1	28,28	40506455,40525009	psi1:0.684210526316,psi2:0.75	C1_26,C2_6	C1_12,C2_2	Yes
ENSG00000114395,ENSG00000272104	CYB561D2,XXcos-LUCA11.5	chr3:50388384-50388867	+	altA	66	No	-	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	31,94	50388415,50388774	No	No	No	bcc_61536|Cycle_0|Type_1	31,28	50388415,50388840	psi1:0.833333333333,psi2:0.875	C1_5,C2_14	C1_1,C2_2	(GC:50388415,AG:50388774);(GC:50388415,AG:50388840)
ENSG00000175662	TOM1L2	chr17:17786147-17797005	-	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,135,31	17786177,17787948,17788082,17796975	No	Yes	No	bcc_5714|Cycle_2|Type_1	30,31	17786177,17796975	psi1:0.957746478873,psi2:1.0	C1_68,C2_5	C1_3,C2_0	Yes
ENSG00000066468	FGFR2	chr10:123310942-123353253	-	ES_MULTI	345	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,78,267,31	123310973,123324016,123324093,123324952,123325218,123353223	No	Yes	No	bcc_40054|Cycle_1|Type_1	31,31	123310973,123353223	psi1:0.978417266187,psi2:1.0	C1_136,C2_21	C1_3,C2_0	Yes
ENSG00000131795	RBM8A	chr1:145508045-145508239	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,33	145508075,145508207	No	No	No	bcc_2433|Cycle_0|Type_1	30,30	145508075,145508210	psi1:0.86301369863,psi2:0.9	C1_63,C2_36	C1_10,C2_4	Yes
ENSG00000106829	TLE4	chr9:82191061-82242317	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,29	82191092,82227571,82227633,82242289	No	Yes	No	bcc_56361|Cycle_2|Type_1	31,29	82191092,82242289	psi1:0.925925925926,psi2:1.0	C1_25,C2_1	C1_2,C2_0	Yes
ENSG00000165802	NSMF	chr9:140348864-140350886	-	ES	69	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,69,6,24	140348895,140349691,140349759,140350081,140350086,140350863	No	Yes	No	bcc_19204|Cycle_2|Type_1	31,6,24	140348895,140350081,140350086,140350863	psi1:0.886363636364,psi2:1.0	C1_39,C2_1	C1_5,C2_0	Yes
ENSG00000143702	CEP170	chr1:243336117-243349591	-	ES	294	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,294,31	243336148,243349081,243349374,243349561	No	Yes	No	bcc_37717|Cycle_0|Type_1	31,31	243336148,243349561	psi1:0.918032786885,psi2:1.0	C1_56,C2_2	C1_5,C2_0	Yes
ENSG00000166200	COPS2	chr15:49429606-49431754	-	altA	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	49,30	49429655,49431725	No	No	No	bcc_38958|Cycle_0|Type_1	28,30	49429634,49431725	psi1:0.333333333333,psi2:0.384615384615	C1_7,C2_10	C1_14,C2_16	Yes
ENSG00000005471	ABCB4	chr7:87038677-87042962	-	ES	141	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,141,30	87038708,87041209,87041349,87042933	No	No	No	bcc_6263|Cycle_8|Type_1	31,30	87038708,87042933	psi1:1.0,psi2:0.911764705882	C1_4,C2_124	C1_0,C2_12	Yes
ENSG00000082397	EPB41L3	chr18:5393448-5395095	-	ES	117	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,117,30	5393477,5394676,5394792,5395066	No	Yes	No	bcc_40309|Cycle_1|Type_1	29,30	5393477,5395066	psi1:0.923295454545,psi2:1.0	C1_325,C2_12	C1_27,C2_0	Yes
ENSG00000123179	EBPL	chr13:50235314-50265419	-	ES	139	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,139,30	50235344,50237193,50237331,50265390	No	Yes	No	bcc_37651|Cycle_2|Type_1	30,30	50235344,50265390	psi1:1.0,psi2:0.958333333333	C1_8,C2_115	C1_0,C2_5	Yes
ENSG00000144852	NR1I2	chr3:119530542-119531673	+	altA	111	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,141	119530573,119531533	No	No	No	bcc_52613|Cycle_1|Type_1	31,30	119530573,119531644	psi1:1.0,psi2:0.9	C1_1,C2_36	C1_0,C2_4	Yes
ENSG00000111653	ING4	chr12:6761902-6762132	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,31	6761936,6762102	No	No	No	bcc_60152|Cycle_0|Type_1	31,31	6761933,6762102	psi1:0.41935483871,psi2:0.5	C1_13,C2_2	C1_18,C2_2	Yes
ENSG00000147586,ENSG00000076554	MRPS28,TPD52	chr8:80915385-80942300	-	altD	15	No	Yes	protein_coding,protein_coding	2_ss_annotated_(over_3_ss):80942271,80915415	30,45	80915415,80942256	No	Yes	No	bcc_42573|Cycle_0|Type_1	30,30	80915415,80942271	psi1:0.307692307692,psi2:0.260869565217	C1_8,C2_6	C1_18,C2_17	Yes
ENSG00000119487	MAPKAP1	chr9:128246831-128305367	-	ES	108	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,108,30	128246862,128268589,128268696,128305338	No	No	No	bcc_40801|Cycle_0|Type_1	31,30	128246862,128305338	psi1:0.710526315789,psi2:0.757575757576	C1_27,C2_50	C1_11,C2_16	Yes
ENSG00000029364	SLC39A9	chr14:69890888-69919987	+	ES	198	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,198,30	69890919,69908786,69908983,69919958	No	No	No	bcc_12443|Cycle_0|Type_1	31,30	69890919,69919958	psi1:0.964285714286,psi2:0.981132075472	C1_27,C2_52	C1_1,C2_1	Yes
ENSG00000080503	SMARCA2	chr9:2186197-2192734	+	ES	143	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,143,31	2186228,2191266,2191408,2192704	No	No	No	bcc_33891|Cycle_0|Type_1	31,31	2186228,2192704	psi1:0.979094076655,psi2:1.0	C1_281,C2_41	C1_6,C2_0	Yes
ENSG00000197586	ENTPD6	chr20:25187196-25187742	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,31	25187226,25187712	No	No	No	bcc_59625|Cycle_0|Type_1	30,28	25187226,25187715	psi1:0.714285714286,psi2:0.666666666667	C1_5,C2_4	C1_2,C2_2	Yes
ENSG00000154380	ENAH	chr1:225702572-225706930	-	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,111,31	225702602,225704898,225705008,225706900	No	No	No	bcc_57108|Cycle_0|Type_1	30,31	225702602,225706900	psi1:0.948717948718,psi2:1.0	C1_37,C2_2	C1_2,C2_0	Yes
ENSG00000009950	MLXIPL	chr7:73010216-73010513	-	altA	54	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):73010483,73010299	83,31	73010299,73010483	No	No	No	bcc_56541|Cycle_0|Type_1	29,31	73010245,73010483	psi1:1.0,psi2:0.96	C1_5,C2_72	C1_0,C2_3	Yes
ENSG00000168306	ACOX2	chr3:58516334-58517048	-	altD	42	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,71	58516365,58516978	No	No	No	bcc_55766|Cycle_1|Type_1	31,29	58516365,58517020	psi1:1.0,psi2:0.969696969697	C1_3,C2_32	C1_0,C2_1	Yes
ENSG00000108523	RNF167	chr17:4843990-4844247	-	IR	196	Yes	Yes	protein_coding	no_known_ss	257	-	No	No	No	bcc_50992|Cycle_0|Type_1	31,30	4844021,4844218	psi1:0.958333333333,psi2:0.933333333333	C1_23,C2_42	C1_1,C2_3	(AG:4844218,GT:4844021)
ENSG00000143164	DCAF6	chr1:167974002-168007638	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,60,30	167974031,167992226,167992285,168007609	No	No	No	bcc_43587|Cycle_0|Type_1	29,30	167974031,168007609	psi1:0.347826086957,psi2:0.296296296296	C1_8,C2_16	C1_15,C2_38	Yes
ENSG00000061918	GUCY1B3	chr4:156680264-156696150	+	ES	74	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,74,31	156680295,156680939,156681012,156696120	No	No	No	bcc_44852|Cycle_0|Type_1	31,31	156680295,156696120	psi1:0.891304347826,psi2:1.0	C1_41,C2_1	C1_5,C2_0	Yes
ENSG00000116791	CRYZ	chr1:75172647-75175812	-	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,102,31	75172678,75172787,75172888,75175782	No	No	No	bcc_43670|Cycle_0|Type_1	31,31	75172678,75175782	psi1:1.0,psi2:0.967391304348	C1_23,C2_267	C1_0,C2_9	Yes
ENSG00000112531	QKI	chr6:163983072-163984506	+	altA	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,55	163983101,163984452	No	Yes	No	bcc_703|Cycle_3|Type_1	29,31	163983101,163984476	psi1:0.756345177665,psi2:0.846153846154	C1_149,C2_11	C1_48,C2_2	Yes
ENSG00000225921	NOL7	chr6:13621057-13632655	+	ES_altAD	1771	Yes	Yes	protein_coding	2_ss_annotated_(over_6_ss):13621088,13632625	1667,112,54	13622724,13625885,13625996,13632602	No	Yes	No	bcc_26252|Cycle_0|Type_1	31,31	13621088,13632625	psi1:0.990595611285,psi2:1.0	C1_948,C2_356	C1_9,C2_0	(CT:13625996,AC:13632602);(GT:13621088,AG:13632625);(CT:13622724,AC:13625885)
ENSG00000130254	SAFB2	chr19:5610670-5613478	-	ES	511	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,511,28,3	5610699,5611131,5611641,5612551,5612578,5613476	No	Yes	No	bcc_14988|Cycle_2|Type_1	29,28,3	5610699,5612551,5612578,5613476	psi1:0.983108108108,psi2:0.963636363636	C1_291,C2_53	C1_5,C2_2	Yes
ENSG00000092199	HNRNPC	chr14:21702357-21737486	-	ES	26	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,26,30	21702388,21731470,21731495,21737457	No	Yes	No	bcc_9563|Cycle_1|Type_1	31,30	21702388,21737457	psi1:0.857142857143,psi2:0.89247311828	C1_36,C2_83	C1_6,C2_10	Yes
ENSG00000059758	CDK17	chr12:96674028-96674615	+	IR	528	No	Yes	protein_coding	no_known_ss	587	-	No	No	No	bcc_47489|Cycle_0|Type_1	29,30	96674057,96674586	psi1:0.876923076923,psi2:0.833333333333	C1_114,C2_25	C1_16,C2_5	(CT:96674057,AC:96674586)
ENSG00000182768	NGRN	chr15:90809077-90809548	+	IR	411	No	Yes	protein_coding	no_known_ss	471	-	No	Yes	No	bcc_50092|Cycle_6|Type_1	31,29	90809108,90809520	psi1:0.99460916442,psi2:0.982142857143	C1_369,C2_55	C1_2,C2_1	Yes
ENSG00000257379,ENSG00000197111	RP11-793H13.8,PCBP2	chr12:53856320-53861033	+	ES	93	No	Yes	processed_transcript,protein_coding	all_splice_sites_known_(4_ss)	31,93,29	53856351,53858544,53858636,53861005	No	Yes	No	bcc_11408|Cycle_5|Type_1	31,29	53856351,53861005	psi1:0.903614457831,psi2:0.872	C1_150,C2_109	C1_16,C2_16	Yes
ENSG00000129518	EAPP	chr14:34993983-35002679	-	ES	118	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,118,30	34994013,34998564,34998681,35002650	No	No	No	bcc_30670|Cycle_0|Type_1	30,30	34994013,35002650	psi1:0.945205479452,psi2:0.966101694915	C1_69,C2_57	C1_4,C2_2	Yes
ENSG00000174446	SNAPC5	chr15:66786859-66790010	-	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,31	66786890,66787668,66787757,66789980	No	No	No	bcc_4593|Cycle_0|Type_1	31,31	66786890,66789980	psi1:0.933333333333,psi2:0.90625	C1_42,C2_29	C1_3,C2_3	Yes
ENSG00000099797	TECR	chr19:14673356-14674046	+	altA	32	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,61	14673387,14673986	No	No	No	bcc_61970|Cycle_0|Type_1	31,29	14673387,14674018	psi1:0.0659340659341,psi2:0.0377358490566	C1_12,C2_2	C1_170,C2_51	Yes
ENSG00000258289,ENSG00000125954	CHURC1,CHURC1-FNTB	chr14:65390813-65392758	+	altA	3	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	31,34	65390844,65392725	No	Yes	No	bcc_5737|Cycle_4|Type_1	31,31	65390844,65392728	psi1:0.147058823529,psi2:0.195652173913	C1_5,C2_27	C1_29,C2_111	Yes
ENSG00000169718	DUS1L	chr17:80016255-80016687	-	altA	8	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	37,31	80016292,80016657	No	No	No	bcc_58951|Cycle_0|Type_1	29,31	80016284,80016657	psi1:0.8,psi2:0.873563218391	C1_4,C2_76	C1_1,C2_11	Yes
ENSG00000204463	BAG6	chr6:31619523-31620231	-	altD	24	No	-	protein_coding	all_splice_sites_known_(3_ss)	30,55	31619553,31620177	No	No	No	bcc_59266|Cycle_2|Type_1	30,31	31619553,31620201	psi1:0.48,psi2:0.428571428571	C1_12,C2_6	C1_13,C2_8	Yes
ENSG00000087302	C14orf166	chr14:52468554-52471105	+	unclassified	46	Yes	Yes	protein_coding	all_splice_sites_known_(5_ss)	30,49,26	52468584,52470912,52470960,52471080	No	No	No	bcc_53568|Cycle_0|Type_1	30,3,26	52468584,52470958,52470960,52471080	psi1:0.977777777778,psi2:0.96	C1_88,C2_120	C1_2,C2_5	Yes
ENSG00000028528	SNX1	chr15:64404852-64415730	+	ES_MULTI	195	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,128,67,29	64404883,64410316,64410443,64410987,64411053,64415702	No	No	No	bcc_48666|Cycle_0|Type_1	31,29	64404883,64415702	psi1:0.97619047619,psi2:0.989010989011	C1_82,C2_90	C1_2,C2_1	(GC:64404883,AG:64410316);(GT:64410443,AG:64410987);(GT:64411053,AG:64415702);(GC:64404883,AG:64415702)
ENSG00000124214	STAU1	chr20:47741095-47752400	-	altA	18	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	47,31	47741142,47752370	No	No	No	bcc_18487|Cycle_0|Type_1	29,31	47741124,47752370	psi1:0.131578947368,psi2:0.1	C1_5,C2_5	C1_33,C2_45	Yes
ENSG00000138758	SEPT11	chr4:77952092-77960926	+	ES_MULTI	2340	No	Yes	protein_coding	4_ss_annotated_(over_6_ss):77960896,77955650,77957990,77952123	31,2153,187,31	77952123,77955650,77957802,77957804,77957990,77960896	No	Yes	No	bcc_17063|Cycle_2|Type_1	31,31	77952123,77960896	psi1:0.994202898551,psi2:1.0	C1_343,C2_243	C1_2,C2_0	-;(GT:77957990,AG:77960896);(GT:77952123,AG:77960896);(GT:77952123,AG:77955650)
ENSG00000163904	SENP2	chr3:185327107-185329476	+	altA	9	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):185327138,185329439	31,38	185327138,185329439	No	No	No	bcc_40513|Cycle_0|Type_1	31,29	185327138,185329448	psi1:0.914893617021,psi2:0.875	C1_43,C2_7	C1_4,C2_1	Yes
ENSG00000034677	RNF19A	chr8:101271443-101276291	-	ES_MULTI	358	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,144,214,30	101271474,101272082,101272225,101273770,101273983,101276262	No	No	No	bcc_41148|Cycle_0|Type_1	31,30	101271474,101276262	psi1:0.983050847458,psi2:1.0	C1_116,C2_19	C1_2,C2_0	Yes
ENSG00000164985	PSIP1	chr9:15471143-15472660	-	altA	162	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):15471174,15472630	193,31	15471336,15472630	No	Yes	No	bcc_9325|Cycle_50|Type_1	31,31	15471174,15472630	psi1:0.951219512195,psi2:1.0	C1_117,C2_6	C1_6,C2_0	(AC:15472630,CA:15471336);(AC:15472630,CT:15471174)
ENSG00000138758	SEPT11	chr4:77952092-77960926	+	ES	2341	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,2341,31	77952123,77955650,77957990,77960896	No	Yes	No	bcc_17063|Cycle_0|Type_1	31,31	77952123,77960896	psi1:0.994252873563,psi2:1.0	C1_346,C2_243	C1_2,C2_0	Yes
ENSG00000189046	ALKBH2	chr12:109526290-109530341	-	ES	199	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,199,30	109526317,109527814,109528012,109530312	No	No	No	bcc_58327|Cycle_0|Type_1	27,30	109526317,109530312	psi1:0.810810810811,psi2:0.848484848485	C1_30,C2_56	C1_7,C2_10	Yes
ENSG00000112531	QKI	chr6:163983071-163984485	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):163984452,163983101	30,34	163983101,163984452	No	Yes	No	bcc_703|Cycle_1|Type_1	30,31	163983101,163984455	psi1:0.959302325581,psi2:1.0	C1_165,C2_10	C1_7,C2_0	Yes
ENSG00000205403	CFI	chr4:110673630-110681456	-	ES_MULTI	45	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,21,24,31	110673659,110678919,110678939,110679092,110679115,110681426	No	Yes	No	bcc_28100|Cycle_2|Type_1	29,31	110673659,110681426	psi1:1.0,psi2:0.883928571429	C1_4,C2_198	C1_0,C2_26	Yes
ENSG00000120341,ENSG00000254154	SEC16B,RP4-798P15.3	chr1:177901912-177902379	-	altA	3	No	Yes	protein_coding,processed_transcript	all_splice_sites_known_(3_ss)	32,31	177901944,177902349	No	No	No	bcc_41252|Cycle_0|Type_1	29,31	177901941,177902349	psi1:0.333333333333,psi2:0.413793103448	C1_1,C2_12	C1_2,C2_17	Yes
ENSG00000135597	REPS1	chr6:139238732-139241382	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	139238764,139241352	No	No	No	bcc_50959|Cycle_0|Type_1	29,31	139238761,139241352	psi1:0.666666666667,psi2:0.620689655172	C1_16,C2_18	C1_8,C2_11	Yes
ENSG00000114021	NIT2	chr3:100064491-100065055	+	IR	502	Yes	Yes	protein_coding	no_known_ss	564	-	No	No	No	bcc_52279|Cycle_1|Type_1	31,31	100064522,100065025	psi1:0.25,psi2:0.312056737589	C1_6,C2_44	C1_18,C2_97	Yes
ENSG00000184203	PPP1R2	chr3:195245951-195251646	-	ES	95	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,95,30	195245982,195250490,195250584,195251617	No	No	No	bcc_30880|Cycle_0|Type_1	31,30	195245982,195251617	psi1:0.976744186047,psi2:1.0	C1_84,C2_9	C1_2,C2_0	Yes
ENSG00000184205	TSPYL2	chrX:53112456-53113757	+	altA	13	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,44	53112487,53113714	No	No	No	bcc_52321|Cycle_0|Type_1	31,31	53112487,53113727	psi1:0.0592592592593,psi2:0	C1_8,C2_0	C1_127,C2_5	(GT:53112487,AG:53113727);(GT:53112487,TG:53113714)
ENSG00000177410	ZFAS1	chr20:47895714-47905612	+	ES	86	Yes	-	antisense	all_splice_sites_known_(4_ss)	31,86,31	47895745,47897022,47897107,47905582	No	Yes	No	bcc_56508|Cycle_0|Type_1	31,31	47895745,47905582	psi1:0.81981981982,psi2:0.857142857143	C1_91,C2_48	C1_20,C2_8	Yes
ENSG00000187514	PTMA	chr2:232576099-232576630	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,34	232576129,232576597	Yes	Yes	Yes	bcc_16133|Cycle_0|Type_1	30,31	232576129,232576600	psi1:0.1,psi2:0.0736196319018	C1_16,C2_12	C1_144,C2_151	Yes
ENSG00000140107	SLC25A47	chr14:100792138-100792522	+	altA	61	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,90	100792168,100792433	No	No	No	bcc_61392|Cycle_0|Type_1	30,29	100792168,100792494	psi1:0,psi2:0.125	C1_0,C2_8	C1_1,C2_56	Yes
ENSG00000137135	ARHGEF39	chr9:35660824-35660964	-	IR	81	No	Yes	protein_coding	no_known_ss	140	-	No	No	No	bcc_60919|Cycle_1|Type_1	31,28	35660855,35660937	psi1:0.789473684211,psi2:0.75	C1_15,C2_15	C1_4,C2_5	(AG:35660937,GT:35660855)
ENSG00000187243	MAGED4B	chrX:51805103-51805359	-	altD	12	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,42	51805134,51805318	Yes	No	No	bcc_45197|Cycle_0|Type_1	31,30	51805134,51805330	psi1:0.0789473684211,psi2:0	C1_3,C2_0	C1_35,C2_1	Yes
ENSG00000154545	MAGED4	chrX:51934927-51935183	+	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	42,31	51934969,51935153	Yes	No	No	bcc_45197|Cycle_0|Type_1	30,31	51934957,51935153	psi1:0.0789473684211,psi2:0	C1_3,C2_0	C1_35,C2_1	Yes
ENSG00000163374	YY1AP1	chr1:155640225-155642381	-	altD	39	No	-	protein_coding	all_splice_sites_known_(3_ss)	30,70	155640255,155642312	No	No	No	bcc_2485|Cycle_2|Type_1	30,31	155640255,155642351	psi1:0.25,psi2:0.210526315789	C1_4,C2_4	C1_12,C2_15	Yes
ENSG00000088448	ANKRD10	chr13:111532428-111536075	-	altD	145	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,176	111532459,111535900	No	No	No	bcc_41392|Cycle_0|Type_1	31,31	111532459,111536045	psi1:0.6875,psi2:0.733333333333	C1_22,C2_11	C1_10,C2_4	Yes
ENSG00000100897	DCAF11	chr14:24584905-24586208	+	altAD	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	53,83	24584958,24586126	No	Yes	No	bcc_22732|Cycle_3|Type_1	30,28	24584935,24586181	psi1:0.962962962963,psi2:0.938271604938	C1_26,C2_76	C1_1,C2_5	Yes
ENSG00000072803	FBXW11	chr5:171337771-171433491	-	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,63,30	171337801,171341347,171341409,171433462	No	No	No	bcc_36972|Cycle_0|Type_1	30,30	171337801,171433462	psi1:0.833333333333,psi2:0.875	C1_25,C2_7	C1_5,C2_1	Yes
-	unknown_gene	chr5:139501961-139502025	0	deletion	3	No	-	-	no_ss	64	139501961	No	No	No	bcc_47223|Cycle_0|Type_1	30,31	139501991,139501995	psi1:0.935483870968,psi2:1.0	C1_29,C2_1	C1_2,C2_0	-
ENSG00000132155	RAF1	chr3:12645757-12650295	-	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,99,31	12645788,12647700,12647798,12650265	No	No	No	bcc_49851|Cycle_0|Type_1	31,31	12645788,12650265	psi1:0.928571428571,psi2:0.9	C1_26,C2_54	C1_2,C2_6	Yes
ENSG00000092203	TOX4	chr14:21966483-21967198	+	IR	655	Yes	Yes	protein_coding	no_known_ss	715	-	No	No	No	bcc_776|Cycle_1|Type_1	30,30	21966513,21967169	psi1:0.96644295302,psi2:0.947368421053	C1_144,C2_72	C1_5,C2_4	(CT:21966513,AC:21967169)
ENSG00000119929	CUTC	chr10:101507117-101514313	+	ES	28	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,28,28	101507147,101510126,101510153,101514286	No	No	No	bcc_48070|Cycle_0|Type_1	30,28	101507147,101514286	psi1:0.857142857143,psi2:0.888888888889	C1_12,C2_24	C1_2,C2_3	Yes
ENSG00000108061	SHOC2	chr10:112679385-112745415	+	ES	937	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,937,30	112679415,112723883,112724819,112745386	No	No	No	bcc_23554|Cycle_0|Type_1	30,30	112679415,112745386	psi1:0.98916967509,psi2:1.0	C1_274,C2_66	C1_3,C2_0	Yes
ENSG00000085063	CD59	chr11:33743978-33757958	-	ES	45	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,45,31	33744009,33752970,33753014,33757928	No	Yes	Yes	bcc_27032|Cycle_1|Type_1	31,31	33744009,33757928	psi1:0.356435643564,psi2:0.404761904762	C1_36,C2_17	C1_65,C2_25	Yes
ENSG00000048540	LMO3	chr12:16713444-16753677	-	altD	59	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,89	16713472,16753589	No	No	No	bcc_42308|Cycle_0|Type_1	28,30	16713472,16753648	psi1:0.871428571429,psi2:1.0	C1_61,C2_1	C1_9,C2_0	Yes
ENSG00000091527	CDV3	chr3:133305535-133307227	+	altA	1191	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,1222	133305566,133306006	No	Yes	No	bcc_33121|Cycle_18|Type_1	31,31	133305566,133307197	psi1:0.948339483395,psi2:0.966573816156	C1_257,C2_347	C1_14,C2_12	Yes
ENSG00000165478	HEPACAM	chr11:124792322-124792671	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):124792641,124792354	32,31	124792354,124792641	No	Yes	No	bcc_57201|Cycle_0|Type_1	29,31	124792351,124792641	psi1:0.866666666667,psi2:1.0	C1_65,C2_1	C1_10,C2_0	Yes
ENSG00000175061	FAM211A-AS1	chr17:16342698-16343528	+	altA	126	No	-	processed_transcript	2_ss_annotated_(over_3_ss):16342728,16343499	30,156	16342728,16343373	No	Yes	No	bcc_27470|Cycle_6|Type_1	30,30	16342728,16343499	psi1:0.222222222222,psi2:0.181818181818	C1_6,C2_14	C1_21,C2_63	Yes
ENSG00000163517	HDAC11	chr3:13525034-13543396	+	ES_MULTI	237	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	30,117,43,77,26	13525064,13538236,13538352,13540013,13540055,13542213,13542289,13543371	No	No	No	bcc_66103|Cycle_0|Type_1	30,26	13525064,13543371	psi1:0.887096774194,psi2:1.0	C1_55,C2_1	C1_7,C2_0	Yes
ENSG00000153291	SLC25A27	chr6:46638934-46644316	+	altA	167	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):46644120,46638965	31,197	46638965,46644120	No	No	No	bcc_47537|Cycle_0|Type_1	31,30	46638965,46644287	psi1:0.9375,psi2:1.0	C1_30,C2_1	C1_2,C2_0	Yes
ENSG00000132837	DMGDH	chr5:78317320-78320123	-	altA	156	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):78317504,78320094	184,30	78317504,78320094	No	No	No	bcc_46278|Cycle_0|Type_1	28,30	78317348,78320094	psi1:1.0,psi2:0.9375	C1_1,C2_30	C1_0,C2_2	Yes
ENSG00000198732	SMOC1	chr14:70490133-70496990	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	70490164,70496959	No	No	No	bcc_50649|Cycle_0|Type_1	31,29	70490164,70496962	psi1:0.666666666667,psi2:0.612903225806	C1_16,C2_57	C1_8,C2_36	Yes
ENSG00000154473	BUB3	chr10:124922316-124924593	+	altA	1227	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,1258	124922344,124923336	No	Yes	No	bcc_26109|Cycle_7|Type_1	28,31	124922344,124924563	psi1:0.981012658228,psi2:0.96644295302	C1_310,C2_144	C1_6,C2_5	Yes
ENSG00000123684	LPGAT1	chr1:211919304-211920575	-	IR	1213	Yes	-	protein_coding	no_known_ss	1271	-	No	Yes	Yes	bcc_13046|Cycle_1|Type_1	27,31	211919331,211920545	psi1:0.993527508091,psi2:0.98431372549	C1_307,C2_251	C1_2,C2_4	Yes
ENSG00000160200	CBS	chr21:44473727-44474001	-	IR	214	Yes	-	protein_coding	no_known_ss	274	-	No	Yes	No	bcc_16920|Cycle_0|Type_1	30,30	44473757,44473972	psi1:0.968253968254,psi2:0.985148514851	C1_61,C2_398	C1_2,C2_6	Yes
ENSG00000154473	BUB3	chr10:124922316-124924593	+	ES_altA	1226	Yes	-	protein_coding	3_ss_annotated_(over_5_ss):124922344,124923336,124924563	28,1162,95	124922344,124923336,124924497,124924499	No	Yes	No	bcc_26109|Cycle_6|Type_1	28,31	124922344,124924563	psi1:0.981072555205,psi2:0.966666666667	C1_311,C2_145	C1_6,C2_5	-;(GT:124922344,AG:124923336);(GT:124922344,AG:124924563)
ENSG00000182326	C1S	chr12:7168151-7169171	+	altA	87	No	-	protein_coding	all_splice_sites_known_(3_ss)	30,116	7168181,7169056	No	No	No	bcc_42140|Cycle_0|Type_1	30,29	7168181,7169143	psi1:1.0,psi2:0.890688259109	C1_8,C2_440	C1_0,C2_54	Yes
ENSG00000105894	PTN	chr7:136912790-136936007	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):136935977,136912822	32,31	136912822,136935977	No	No	No	bcc_32863|Cycle_0|Type_1	29,31	136912819,136935977	psi1:0.833333333333,psi2:1.0	C1_85,C2_1	C1_17,C2_0	Yes
ENSG00000174996	KLC2	chr11:66033931-66034668	+	altA	298	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):66034344,66033961	30,325	66033961,66034344	No	No	No	bcc_63409|Cycle_0|Type_1	30,27	66033961,66034642	psi1:0.978494623656,psi2:1.0	C1_91,C2_9	C1_2,C2_0	Yes
ENSG00000081189	MEF2C	chr5:88018614-88024339	-	altA	98	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):88024310,88018742	128,30	88018742,88024310	No	Yes	No	bcc_32516|Cycle_2|Type_1	30,30	88018644,88024310	psi1:0.905660377358,psi2:1.0	C1_48,C2_1	C1_5,C2_0	Yes
ENSG00000179950	PUF60	chr8:144904052-144911480	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,87,31	144904083,144906483,144906569,144911450	No	No	No	bcc_57179|Cycle_0|Type_1	31,31	144904083,144911450	psi1:0.888888888889,psi2:0.857142857143	C1_16,C2_6	C1_2,C2_1	Yes
ENSG00000182768	NGRN	chr15:90809077-90809548	+	altAD	410	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):90809520,90809108	200,270	90809277,90809279	No	Yes	No	bcc_50092|Cycle_5|Type_1	31,29	90809108,90809520	psi1:0.994459833795,psi2:0.984126984127	C1_359,C2_62	C1_2,C2_1	-;(GT:90809108,AG:90809520)
ENSG00000123636	BAZ2B	chr2:160206838-160229644	-	altD	59	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):160229556,160206868	30,89	160206868,160229556	No	No	No	bcc_45531|Cycle_2|Type_1	30,30	160206868,160229615	psi1:0.95652173913,psi2:1.0	C1_44,C2_2	C1_2,C2_0	Yes
ENSG00000141552	ANAPC11	chr17:79849678-79852372	+	ES	63	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,63,30	79849709,79851428,79851490,79852343	No	Yes	No	bcc_61328|Cycle_1|Type_1	31,30	79849709,79852343	psi1:0.928571428571,psi2:0.897959183673	C1_13,C2_44	C1_1,C2_5	Yes
ENSG00000166348	USP54	chr10:75335403-75335923	-	altD	341	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,371	75335433,75335553	No	Yes	No	bcc_44637|Cycle_1|Type_1	30,30	75335433,75335894	psi1:0.921348314607,psi2:1.0	C1_82,C2_2	C1_7,C2_0	Yes
ENSG00000077782	FGFR1	chr8:38285581-38285900	-	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,37	38285611,38285864	No	No	No	bcc_8393|Cycle_0|Type_1	30,31	38285611,38285870	psi1:0.444444444444,psi2:0.4	C1_4,C2_2	C1_5,C2_3	Yes
ENSG00000131504	DIAPH1	chr5:140966733-140998395	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,31	140966764,140967791,140967817,140998365	No	No	No	bcc_60451|Cycle_0|Type_1	31,31	140966764,140998365	psi1:0.5,psi2:0.555555555556	C1_1,C2_5	C1_1,C2_4	Yes
ENSG00000105402	NAPA	chr19:47991031-47991145	+	IR	54	No	-	protein_coding	no_known_ss	114	-	No	No	No	bcc_44374|Cycle_0|Type_1	29,31	47991060,47991115	psi1:0.873417721519,psi2:0.903765690377	C1_69,C2_216	C1_10,C2_23	(GG:47991060,CA:47991115)
ENSG00000142494	SLC47A1	chr17:19470511-19476122	+	ES	95	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,95,30	19470541,19474791,19474885,19476093	No	No	No	bcc_14931|Cycle_0|Type_1	30,30	19470541,19476093	psi1:1.0,psi2:0.940298507463	C1_2,C2_63	C1_0,C2_4	Yes
ENSG00000198780	FAM169A	chr5:74109816-74134819	-	ES	172	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,172,30	74109844,74130251,74130422,74134790	No	No	No	bcc_54387|Cycle_0|Type_1	28,30	74109844,74134790	psi1:0.957446808511,psi2:1.0	C1_45,C2_2	C1_2,C2_0	Yes
ENSG00000166348	USP54	chr10:75335403-75335923	-	altD	338	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,368	75335433,75335556	No	Yes	No	bcc_44637|Cycle_2|Type_1	30,30	75335433,75335894	psi1:0.923076923077,psi2:1.0	C1_84,C2_2	C1_7,C2_0	Yes
ENSG00000135423	GLS2	chr12:56869730-56872866	-	ES_MULTI	303	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,59,164,80,31	56869761,56871444,56871502,56871717,56871880,56871967,56872046,56872836	No	No	No	bcc_56390|Cycle_0|Type_1	31,31	56869761,56872836	psi1:1.0,psi2:0.982456140351	C1_19,C2_168	C1_0,C2_3	Yes
ENSG00000121310	ECHDC2	chr1:53362240-53364876	-	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,48,31	53362269,53363109,53363156,53364846	No	No	No	bcc_11268|Cycle_0|Type_1	29,31	53362269,53364846	psi1:1.0,psi2:0.936936936937	C1_3,C2_104	C1_0,C2_7	Yes
ENSG00000163001	CCDC104	chr2:55750928-55761038	+	ES	115	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,115,30	55750958,55756014,55756128,55761009	No	No	No	bcc_46441|Cycle_0|Type_1	30,30	55750958,55761009	psi1:0.982558139535,psi2:1.0	C1_169,C2_19	C1_3,C2_0	Yes
ENSG00000091527	CDV3	chr3:133305535-133307227	+	altA	1194	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,1225	133305566,133306003	No	Yes	No	bcc_33121|Cycle_56|Type_1	31,31	133305566,133307197	psi1:0.950877192982,psi2:0.967391304348	C1_271,C2_356	C1_14,C2_12	Yes
ENSG00000170791	CHCHD7	chr8:57124366-57127185	+	ES	148	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,148,29	57124396,57125321,57125468,57127157	No	No	No	bcc_56567|Cycle_0|Type_1	30,29	57124396,57127157	psi1:0.4,psi2:0.444444444444	C1_16,C2_8	C1_24,C2_10	Yes
ENSG00000155096	AZIN1	chr8:103855944-103870271	-	ES	146	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,146,31	103855975,103862227,103862372,103870241	No	No	No	bcc_42854|Cycle_0|Type_1	31,31	103855975,103870241	psi1:0.647058823529,psi2:0.606557377049	C1_33,C2_37	C1_18,C2_24	Yes
ENSG00000168297	PXK	chr3:58368396-58380753	+	ES_MULTI	227	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,78,74,75,29	58368427,58376309,58376386,58376874,58376947,58377500,58377574,58380725	No	No	No	bcc_47686|Cycle_0|Type_1	31,29	58368427,58380725	psi1:0.982300884956,psi2:1.0	C1_111,C2_12	C1_2,C2_0	Yes
ENSG00000154473	BUB3	chr10:124922316-124924593	+	ES_altA	1225	Yes	-	protein_coding	3_ss_annotated_(over_5_ss):124922344,124923336,124924563	28,1149,107	124922344,124923336,124924484,124924487	No	Yes	No	bcc_26109|Cycle_5|Type_1	28,31	124922344,124924563	psi1:0.981012658228,psi2:0.967741935484	C1_310,C2_150	C1_6,C2_5	(TT:124924484,TT:124924487);(GT:124922344,AG:124923336);(GT:124922344,AG:124924563)
ENSG00000093217	XYLB	chr3:38437025-38442411	+	ES	88	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,88,30	38437054,38438563,38438650,38442382	No	No	No	bcc_61645|Cycle_0|Type_1	29,30	38437054,38442382	psi1:1.0,psi2:0.93023255814	C1_1,C2_40	C1_0,C2_3	Yes
ENSG00000126432	PRDX5	chr11:64085829-64088363	+	ES_MULTI	267	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,135,132,27	64085858,64087206,64087340,64088133,64088264,64088337	No	Yes	No	bcc_62015|Cycle_3|Type_1	29,27	64085858,64088337	psi1:0.977707006369,psi2:0.988527724665	C1_614,C2_517	C1_14,C2_6	Yes
ENSG00000176903	PNMA1	chr14:74179020-74179088	+	deletion	7	Yes	-	protein_coding	no_known_ss	68	74179020	No	No	No	bcc_46218|Cycle_0|Type_1	30,31	74179050,74179058	psi1:0.516339869281,psi2:0.4	C1_79,C2_2	C1_74,C2_3	-
ENSG00000182902	SLC25A18	chr22:18050020-18062670	+	altA	132	No	-	protein_coding	2_ss_annotated_(over_3_ss):18050051,18062511	31,160	18050051,18062511	No	Yes	No	bcc_52202|Cycle_0|Type_1	31,28	18050051,18062643	psi1:0.936507936508,psi2:0.915254237288	C1_59,C2_54	C1_4,C2_5	Yes
ENSG00000166164	BRD7	chr16:50354656-50355923	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	50354688,50355893	No	No	No	bcc_53945|Cycle_0|Type_1	29,31	50354685,50355893	psi1:0.304347826087,psi2:0.266666666667	C1_7,C2_4	C1_16,C2_11	Yes
ENSG00000105518	TMEM205	chr19:11456274-11456913	-	altD	81	No	-	protein_coding	all_splice_sites_known_(3_ss)	30,111	11456304,11456803	No	Yes	No	bcc_63141|Cycle_13|Type_1	30,30	11456304,11456884	psi1:0.971428571429,psi2:0.983606557377	C1_68,C2_60	C1_2,C2_1	Yes
ENSG00000126432	PRDX5	chr11:64085827-64088363	+	ES	132	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,132,27	64085858,64088133,64088264,64088337	No	Yes	No	bcc_62015|Cycle_1|Type_1	31,27	64085858,64088337	psi1:0.962732919255,psi2:0.976833976834	C1_310,C2_253	C1_12,C2_6	Yes
ENSG00000100445	SDR39U1	chr14:24909669-24910018	-	IR	290	Yes	Yes	protein_coding	no_known_ss	349	-	No	No	No	bcc_61107|Cycle_1|Type_1	29,30	24909698,24909989	psi1:0.8,psi2:0.763636363636	C1_20,C2_42	C1_5,C2_13	Yes
ENSG00000138709	LARP1B	chr4:128999086-129012186	+	ES	141	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,141,31	128999117,129003320,129003460,129012156	No	Yes	No	bcc_47505|Cycle_0|Type_1	31,31	128999117,129012156	psi1:0.933333333333,psi2:0.911111111111	C1_28,C2_41	C1_2,C2_4	Yes
ENSG00000197568	HHLA3	chr1:70832190-70833329	+	ES	52	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,52,30	70832220,70832616,70832667,70833300	No	No	No	bcc_3609|Cycle_0|Type_1	30,30	70832220,70833300	psi1:0.571428571429,psi2:0.611111111111	C1_8,C2_11	C1_6,C2_7	Yes
ENSG00000172660	TAF15	chr17:34147214-34147366	+	altD	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	38,31	34147252,34147336	No	No	No	bcc_51762|Cycle_0|Type_1	29,31	34147243,34147336	psi1:0.892561983471,psi2:0.865671641791	C1_108,C2_58	C1_13,C2_9	Yes
ENSG00000110911	SLC11A2	chr12:51375556-51382195	-	altD	82	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):51375586,51382165	30,113	51375586,51382083	No	No	No	bcc_35493|Cycle_0|Type_1	30,31	51375586,51382165	psi1:0.9375,psi2:0.916666666667	C1_15,C2_11	C1_1,C2_1	Yes
ENSG00000065534	MYLK	chr3:123337587-123339083	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,30	123337617,123339054	No	No	No	bcc_30326|Cycle_0|Type_1	27,30	123337614,123339054	psi1:0.719298245614,psi2:0.754385964912	C1_41,C2_43	C1_16,C2_14	Yes
ENSG00000159256	MORC3	chr21:37732311-37732511	+	altD	33	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):37732482,37732375	64,30	37732375,37732482	No	No	No	bcc_54098|Cycle_0|Type_1	31,30	37732342,37732482	psi1:0.9,psi2:0.875	C1_9,C2_7	C1_1,C2_1	Yes
ENSG00000138036	DYNC2LI1	chr2:44021751-44023059	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,34	44021782,44023026	No	No	No	bcc_40879|Cycle_4|Type_1	31,31	44021782,44023029	psi1:0.4375,psi2:0.5	C1_7,C2_1	C1_9,C2_1	Yes
ENSG00000154723	ATP5J	chr21:27102082-27107194	-	ES	66	No	-	protein_coding	3_ss_annotated_(over_4_ss):27102112,27107164,27106644	30,66,31	27102112,27106644,27106709,27107164	No	Yes	No	bcc_51547|Cycle_3|Type_1	30,31	27102112,27107164	psi1:0.0314685314685,psi2:0.018779342723	C1_9,C2_4	C1_277,C2_209	Yes
ENSG00000025423	HSD17B6	chr12:57157167-57167647	+	altD	8	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):57167618,57157198	39,30	57157206,57167618	No	No	No	bcc_27715|Cycle_0|Type_1	31,30	57157198,57167618	psi1:0,psi2:0.0600706713781	C1_0,C2_17	C1_7,C2_266	Yes
ENSG00000151500	THYN1	chr11:134118348-134119091	-	ES	151	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,151,31	134118378,134118703,134118853,134119061	No	No	No	bcc_49910|Cycle_1|Type_1	30,31	134118378,134119061	psi1:0.915662650602,psi2:0.936170212766	C1_76,C2_88	C1_7,C2_6	Yes
ENSG00000112715	VEGFA	chr6:43746625-43752308	+	ES_MULTI	204	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,72,132,31	43746655,43748469,43748540,43749693,43749824,43752278	No	Yes	No	bcc_39955|Cycle_4|Type_1	30,31	43746655,43752278	psi1:0.857142857143,psi2:0.893617021277	C1_12,C2_84	C1_2,C2_10	Yes
ENSG00000008517	IL32	chr16:3117385-3118183	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,60,27,3	3117416,3117555,3117614,3117985,3118011,3118181	No	No	No	bcc_25857|Cycle_0|Type_1	31,27,3	3117416,3117985,3118011,3118181	psi1:1.0,psi2:0.95530726257	C1_6,C2_171	C1_0,C2_8	Yes
ENSG00000132702	HAPLN2	chr1:156593337-156593733	+	altA	109	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):156593599,156593367	30,135	156593367,156593599	No	No	No	bcc_56690|Cycle_0|Type_1	30,26	156593367,156593708	psi1:0.924528301887,psi2:1.0	C1_49,C2_1	C1_4,C2_0	Yes
ENSG00000112715	VEGFA	chr6:43746625-43752308	+	ES_MULTI	186	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,54,132,31	43746655,43748469,43748522,43749693,43749824,43752278	No	Yes	No	bcc_39955|Cycle_5|Type_1	30,31	43746655,43752278	psi1:0.833333333333,psi2:0.871794871795	C1_10,C2_68	C1_2,C2_10	Yes
ENSG00000169714	CNBP	chr3:128890322-128890507	-	altA	30	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	59,31	128890381,128890477	No	Yes	No	bcc_14249|Cycle_0|Type_1	29,31	128890351,128890477	psi1:0.932432432432,psi2:0.950980392157	C1_138,C2_97	C1_10,C2_5	Yes
ENSG00000128283	CDC42EP1	chr22:37964381-37964460	+	deletion	21	No	Yes	protein_coding	no_known_ss	79	37964381	No	Yes	No	bcc_21420|Cycle_1|Type_1	33,25	37964414,37964436	psi1:0.666666666667,psi2:0.608695652174	C1_2,C2_14	C1_1,C2_9	-
ENSG00000110921	MVK	chr12:110017721-110023855	+	ES	156	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,156,29	110017751,110019200,110019355,110023827	No	Yes	No	bcc_62477|Cycle_2|Type_1	30,29	110017751,110023827	psi1:0.888888888889,psi2:0.918367346939	C1_8,C2_45	C1_1,C2_4	Yes
ENSG00000197694	SPTAN1	chr9:131353873-131356484	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,60,31	131353904,131355262,131355321,131356454	No	No	No	bcc_46315|Cycle_0|Type_1	31,31	131353904,131356454	psi1:0.789473684211,psi2:0.727272727273	C1_120,C2_8	C1_32,C2_3	Yes
ENSG00000196998,ENSG00000250232	WDR45,AF196779.12	chrX:48933292-48933555	-	altA	90	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	120,31	48933412,48933525	No	No	No	bcc_61137|Cycle_0|Type_1	30,31	48933322,48933525	psi1:0.958333333333,psi2:0.94	C1_23,C2_47	C1_1,C2_3	Yes
ENSG00000149428	HYOU1	chr11:118916513-118917159	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):118917129,118916543	33,31	118916546,118917129	No	No	No	bcc_26020|Cycle_0|Type_1	30,31	118916543,118917129	psi1:0.166666666667,psi2:0.252459016393	C1_2,C2_77	C1_10,C2_228	Yes
ENSG00000112851	ERBB2IP	chr5:65350750-65372172	+	ES	207	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,207,29	65350779,65370852,65371058,65372144	No	No	No	bcc_31203|Cycle_4|Type_1	29,29	65350779,65372144	psi1:0.914893617021,psi2:0.934782608696	C1_43,C2_43	C1_4,C2_3	Yes
ENSG00000149658	YTHDF1	chr20:61828057-61845246	-	ES	1521	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,1521,31	61828086,61833639,61835159,61845216	No	No	No	bcc_18809|Cycle_1|Type_1	29,31	61828086,61845216	psi1:0.985915492958,psi2:0.99375	C1_210,C2_159	C1_3,C2_1	Yes
ENSG00000136560	TANK	chr2:162081226-162091882	+	ES	581	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,581,30	162081257,162087482,162088062,162091853	No	No	No	bcc_46662|Cycle_0|Type_1	31,30	162081257,162091853	psi1:0.978260869565,psi2:0.987951807229	C1_90,C2_164	C1_2,C2_2	Yes
ENSG00000130177	CDC16	chr13:115030685-115037782	+	altA	94	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):115030715,115037659	30,124	115030715,115037659	No	No	No	bcc_47794|Cycle_3|Type_1	30,30	115030715,115037753	psi1:0.972972972973,psi2:0.956989247312	C1_36,C2_89	C1_1,C2_4	Yes
ENSG00000143801	PSEN2	chr1:227079035-227079476	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	27,33	227079062,227079444	No	No	No	bcc_64022|Cycle_0|Type_1	27,30	227079062,227079447	psi1:0.714285714286,psi2:0.75	C1_5,C2_12	C1_2,C2_4	Yes
ENSG00000003147	ICA1	chr7:8272352-8275570	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	8272385,8275540	No	No	No	bcc_40164|Cycle_0|Type_1	30,31	8272382,8275540	psi1:0.666666666667,psi2:0.705882352941	C1_4,C2_12	C1_2,C2_5	Yes
ENSG00000132670	PTPRA	chr20:2998528-3005148	+	ES_MULTI	423	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,120,167,136,31	2998559,3001955,3002074,3002700,3002866,3003335,3003470,3005118	No	No	No	bcc_37464|Cycle_5|Type_1	31,31	2998559,3005118	psi1:0.987179487179,psi2:1.0	C1_231,C2_28	C1_3,C2_0	Yes
ENSG00000141759	TXNL4A	chr18:77733826-77737628	-	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,70,31	77733856,77736718,77736787,77737598	No	No	No	bcc_55866|Cycle_1|Type_1	30,31	77733856,77737598	psi1:0.151515151515,psi2:0.179104477612	C1_10,C2_12	C1_56,C2_55	Yes
ENSG00000141002	TCF25	chr16:89952343-89958629	+	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,66,29	89952374,89954060,89954125,89958601	No	No	No	bcc_36119|Cycle_0|Type_1	31,29	89952374,89958601	psi1:0.96174863388,psi2:0.945205479452	C1_176,C2_69	C1_7,C2_4	Yes
ENSG00000172809	RPL38	chr17:72199820-72200087	+	altD	35	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	64,31	72199884,72200057	No	No	No	bcc_47623|Cycle_0|Type_1	29,31	72199849,72200057	psi1:0.954545454545,psi2:0.936363636364	C1_105,C2_206	C1_5,C2_14	Yes
ENSG00000126522	ASL	chr7:65551618-65552348	+	ES	78	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,78,28	65551649,65551731,65551808,65552321	No	No	No	bcc_9823|Cycle_0|Type_1	31,28	65551649,65552321	psi1:1.0,psi2:0.952054794521	C1_4,C2_139	C1_0,C2_7	Yes
ENSG00000160679	CHTOP	chr1:153610894-153614750	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,32	153610924,153614719	No	No	No	bcc_44874|Cycle_2|Type_1	30,29	153610924,153614722	psi1:0.421052631579,psi2:0.384615384615	C1_8,C2_5	C1_11,C2_8	Yes
ENSG00000143702	CEP170	chr1:243336117-243349589	-	altD	480	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,509	243336148,243349081	No	Yes	No	bcc_37717|Cycle_1|Type_1	31,29	243336148,243349561	psi1:0.955882352941,psi2:1.0	C1_65,C2_2	C1_3,C2_0	Yes
ENSG00000164733	CTSB	chr8:11710957-11725539	-	ES	88	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,88,30	11710988,11721885,11721972,11725510	No	No	No	bcc_21115|Cycle_0|Type_1	31,30	11710988,11725510	psi1:0.25,psi2:0.304347826087	C1_2,C2_21	C1_6,C2_48	Yes
ENSG00000108179	PPIF	chr10:81112119-81113492	+	altA	62	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,92	81112148,81113401	No	No	No	bcc_14082|Cycle_0|Type_1	29,30	81112148,81113463	psi1:0.151515151515,psi2:0.125	C1_5,C2_9	C1_28,C2_63	Yes
ENSG00000002933	TMEM176A	chr7:150501529-150501944	+	altD	13	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	44,30	150501573,150501915	No	No	No	bcc_52945|Cycle_0|Type_1	31,30	150501560,150501915	psi1:0.04,psi2:0.133663366337	C1_1,C2_189	C1_24,C2_1225	Yes
ENSG00000164985	PSIP1	chr9:15471143-15472660	-	altA	135	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	166,31	15471309,15472630	No	Yes	No	bcc_9325|Cycle_49|Type_1	31,31	15471174,15472630	psi1:0.963855421687,psi2:1.0	C1_160,C2_6	C1_6,C2_0	Yes
ENSG00000113360	DROSHA	chr5:31466361-31468098	-	altD	24	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):31466388,31468046	27,53	31466388,31468046	No	No	No	bcc_52124|Cycle_0|Type_1	27,29	31466388,31468070	psi1:0.818181818182,psi2:0.846153846154	C1_18,C2_11	C1_4,C2_2	Yes
ENSG00000118960	HS1BP3	chr2:20792524-20792895	-	IR	314	Yes	-	protein_coding	no_known_ss	371	-	No	Yes	No	bcc_49787|Cycle_1|Type_1	30,27	20792554,20792869	psi1:1.0,psi2:0.974358974359	C1_4,C2_76	C1_0,C2_2	Yes
ENSG00000156735	BAG4	chr8:38034626-38065056	+	ES	108	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,108,27	38034657,38050206,38050313,38065030	No	No	No	bcc_41977|Cycle_0|Type_1	31,27	38034657,38065030	psi1:0.785714285714,psi2:0.75	C1_11,C2_3	C1_3,C2_1	Yes
ENSG00000100722	ZC3H14	chr14:89044453-89073616	+	ES_MULTI	468	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,75,160,233,30	89044484,89063078,89063152,89068268,89068427,89069172,89069404,89073587	No	Yes	No	bcc_24966|Cycle_1|Type_1	31,30	89044484,89073587	psi1:0.974358974359,psi2:0.961538461538	C1_38,C2_50	C1_1,C2_2	Yes
ENSG00000153310	FAM49B	chr8:130883711-130915588	-	ES	83	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,83,31	130883742,130891635,130891717,130915558	No	Yes	No	bcc_40732|Cycle_0|Type_1	31,31	130883742,130915558	psi1:0.728571428571,psi2:0.777777777778	C1_51,C2_7	C1_19,C2_2	Yes
ENSG00000112110	MRPL18	chr6:160218370-160219114	+	altD	149	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):160219084,160218550	180,31	160218550,160219084	No	No	No	bcc_42637|Cycle_0|Type_1	31,31	160218401,160219084	psi1:0.971830985915,psi2:0.957746478873	C1_69,C2_136	C1_2,C2_6	Yes
ENSG00000163539	CLASP2	chr3:33650088-33661125	-	ES	71	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,71,31	33650118,33653493,33653563,33661095	No	No	No	bcc_23697|Cycle_0|Type_1	30,31	33650118,33661095	psi1:0.987804878049,psi2:1.0	C1_81,C2_9	C1_1,C2_0	Yes
ENSG00000164615	CAMLG	chr5:134074451-134079706	+	ES	461	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,461,30	134074482,134076753,134077213,134079677	No	Yes	No	bcc_32091|Cycle_0|Type_1	31,30	134074482,134079677	psi1:0.953051643192,psi2:0.972972972973	C1_203,C2_36	C1_10,C2_1	Yes
ENSG00000083642	PDS5B	chr13:33344667-33344820	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):33344792,33344698	31,32	33344698,33344789	No	No	No	bcc_30629|Cycle_0|Type_1	31,29	33344698,33344792	psi1:0.206896551724,psi2:0.25	C1_6,C2_1	C1_23,C2_3	Yes
ENSG00000141469	SLC14A1	chr18:43304948-43314269	+	ES_MULTI	362	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,172,190,31	43304978,43310265,43310436,43310980,43311169,43314239	No	No	No	bcc_39116|Cycle_0|Type_1	30,31	43304978,43314239	psi1:0.941747572816,psi2:1.0	C1_97,C2_2	C1_6,C2_0	Yes
ENSG00000055955	ITIH4	chr3:52852536-52853438	-	altA	286	Yes	Yes	protein_coding	1_ss_annotated_(over_3_ss):52853409	317,30	52852853,52853409	No	Yes	No	bcc_22408|Cycle_15|Type_1	31,30	52852567,52853409	psi1:1.0,psi2:0.822580645161	C1_1,C2_153	C1_0,C2_33	(AC:52853409,CT:52852853);(AC:52853409,CC:52852567)
ENSG00000198646	NCOA6	chr20:33302772-33302834	-	deletion	3	No	-	protein_coding	no_known_ss	62	33302772	No	No	No	bcc_50062|Cycle_0|Type_1	28,31	33302800,33302804	psi1:0.607142857143,psi2:0.64	C1_17,C2_16	C1_11,C2_9	-
ENSG00000123179	EBPL	chr13:50235314-50265419	-	ES_MULTI	209	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,139,70,30	50235344,50237193,50237331,50243913,50243982,50265390	No	Yes	No	bcc_37651|Cycle_3|Type_1	30,30	50235344,50265390	psi1:1.0,psi2:0.969135802469	C1_6,C2_157	C1_0,C2_5	Yes
ENSG00000029363	BCLAF1	chr6:136597098-136599033	-	altA	519	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	548,31	136597646,136599003	No	No	No	bcc_33671|Cycle_1|Type_1	29,31	136597127,136599003	psi1:0.990353697749,psi2:1.0	C1_308,C2_41	C1_3,C2_0	Yes
ENSG00000183291	SEP15	chr1:87329261-87346375	-	ES	50	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,50,31	87329288,87333736,87333785,87346345	No	No	No	bcc_48855|Cycle_0|Type_1	27,31	87329288,87346345	psi1:0.940298507463,psi2:0.923444976077	C1_189,C2_193	C1_12,C2_16	Yes
ENSG00000073169	SELO	chr22:50644862-50646994	+	altD	58	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):50644949,50646965	87,30	50644949,50646965	No	No	No	bcc_61444|Cycle_0|Type_1	29,30	50644891,50646965	psi1:1.0,psi2:0.953488372093	C1_1,C2_41	C1_0,C2_2	Yes
ENSG00000143409	FAM63A	chr1:150975153-150978817	-	altA	262	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	291,30	150975444,150978788	No	No	No	bcc_62024|Cycle_0|Type_1	29,30	150975182,150978788	psi1:0.935483870968,psi2:0.916666666667	C1_29,C2_11	C1_2,C2_1	Yes
ENSG00000010165	METTL13	chr1:171757039-171761185	+	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,165,29	171757070,171759592,171759756,171761157	No	No	No	bcc_55795|Cycle_0|Type_1	31,29	171757070,171761157	psi1:0.916666666667,psi2:0.935483870968	C1_11,C2_29	C1_1,C2_2	Yes
ENSG00000143845	ETNK2	chr1:204110557-204118861	-	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,123,31	204110585,204115770,204115892,204118831	No	No	No	bcc_56449|Cycle_0|Type_1	28,31	204110585,204118831	psi1:1.0,psi2:0.964071856287	C1_5,C2_161	C1_0,C2_6	Yes
ENSG00000124588	NQO2	chr6:3012877-3017145	+	ES	114	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,114,28	3012908,3015764,3015877,3017118	No	No	No	bcc_61579|Cycle_1|Type_1	31,28	3012908,3017118	psi1:0.90625,psi2:0.930481283422	C1_29,C2_174	C1_3,C2_13	Yes
ENSG00000147647	DPYS	chr8:105392041-105393438	-	IR	1340	Yes	-	protein_coding	no_known_ss	1397	-	No	No	No	bcc_43864|Cycle_1|Type_1	30,27	105392071,105393412	psi1:1.0,psi2:0.672605790646	C1_1,C2_302	C1_0,C2_147	Yes
ENSG00000268975,ENSG00000167578,ENSG00000171570	MIA-RAB4B,RAB4B,RAB4B-EGLN2	chr19:41286373-41289855	+	ES	63	No	Yes	protein_coding,protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,63,30	41286404,41289683,41289745,41289826	No	No	No	bcc_61965|Cycle_0|Type_1	31,30	41286404,41289826	psi1:0.866666666667,psi2:0.888888888889	C1_13,C2_8	C1_2,C2_1	Yes
ENSG00000131236	CAP1	chr1:40506427-40525037	+	altAD	21	No	-	protein_coding	all_splice_sites_known_(4_ss)	46,32	40506473,40525006	No	Yes	No	bcc_22511|Cycle_9|Type_1	28,29	40506455,40525009	psi1:0.555555555556,psi2:0.6	C1_15,C2_3	C1_12,C2_2	Yes
ENSG00000215908	CROCCP2	chr1:16944951-16945012	-	deletion	3	No	-	lincRNA	no_known_ss	61	16944951	No	No	No	bcc_56253|Cycle_0|Type_1	27,31	16944978,16944982	psi1:0.794117647059,psi2:0.765625	C1_27,C2_49	C1_7,C2_15	-
ENSG00000140479	PCSK6	chr15:101866653-101872087	-	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,39,31	101866684,101871856,101871894,101872057	No	No	No	bcc_25322|Cycle_0|Type_1	31,31	101866684,101872057	psi1:0.851851851852,psi2:0.879310344828	C1_23,C2_102	C1_4,C2_14	Yes
ENSG00000160200	CBS	chr21:44473727-44474001	-	altAD	209	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):44473972,44473757	155,114	44473882,44473888	No	Yes	No	bcc_16920|Cycle_1|Type_1	30,30	44473757,44473972	psi1:0.967213114754,psi2:0.979865771812	C1_59,C2_292	C1_2,C2_6	(AG:44473888,GC:44473882);(AC:44473972,CT:44473757)
ENSG00000082438	COBLL1	chr2:165552313-165555944	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,30	165552346,165555915	No	No	No	bcc_35718|Cycle_0|Type_1	30,30	165552343,165555915	psi1:0.6,psi2:0.636363636364	C1_6,C2_21	C1_4,C2_12	Yes
ENSG00000131089	ARHGEF9	chrX:62917027-62944482	-	ES_altAD	359	Yes	Yes	protein_coding	4_ss_annotated_(over_6_ss):62917184,62926329,62926138,62944412	157,192,71	62917184,62926138,62926329,62944412	No	Yes	No	bcc_9777|Cycle_3|Type_1	30,31	62917057,62944452	psi1:0.985401459854,psi2:1.0	C1_135,C2_10	C1_2,C2_0	(CG:62944452,AC:62917057);(AC:62926138,CT:62917184);(AC:62944412,CT:62926329)
ENSG00000142864	SERBP1	chr1:67890611-67890795	-	altA	18	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	49,30	67890660,67890766	No	No	No	bcc_34576|Cycle_0|Type_1	31,30	67890642,67890766	psi1:0.566951566952,psi2:0.6	C1_199,C2_108	C1_152,C2_72	Yes
ENSG00000170004	CHD3	chr17:7810775-7811240	+	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,102,29	7810806,7810919,7811020,7811212	No	No	No	bcc_26040|Cycle_4|Type_1	31,29	7810806,7811212	psi1:0.785714285714,psi2:0.75	C1_33,C2_6	C1_9,C2_2	Yes
ENSG00000148660	CAMK2G	chr10:75597240-75601957	-	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,63,31	75597269,75599297,75599359,75601927	No	No	No	bcc_56142|Cycle_0|Type_1	29,31	75597269,75601927	psi1:0.271844660194,psi2:0.333333333333	C1_28,C2_2	C1_75,C2_4	Yes
ENSG00000148719	DNAJB12	chr10:74094344-74095622	-	altD	54	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,85	74094375,74095538	No	No	No	bcc_60162|Cycle_0|Type_1	31,31	74094375,74095592	psi1:0.8,psi2:0.827586206897	C1_8,C2_24	C1_2,C2_5	Yes
ENSG00000106976	DNM1	chr9:131015386-131016962	+	altA	648	No	-	protein_coding	2_ss_annotated_(over_3_ss):131015416,131016933	30,678	131015416,131016285	No	Yes	No	bcc_57439|Cycle_1|Type_1	30,30	131015416,131016933	psi1:0.91,psi2:1.0	C1_91,C2_1	C1_9,C2_0	Yes
ENSG00000106976	DNM1	chr9:131015385-131016962	+	altA	645	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,675	131015416,131016288	No	Yes	No	bcc_57439|Cycle_5|Type_1	31,30	131015416,131016933	psi1:0.915789473684,psi2:1.0	C1_87,C2_1	C1_8,C2_0	Yes
ENSG00000196776	CD47	chr3:107766109-107770814	-	ES	25	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,25,29	107766139,107769425,107769449,107770786	No	Yes	No	bcc_1040|Cycle_1|Type_1	30,29	107766139,107770786	psi1:0.45,psi2:0.417721518987	C1_18,C2_33	C1_22,C2_46	Yes
ENSG00000135047	CTSL	chr9:90341135-90342539	+	altD	149	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):90341313,90342509	178,31	90341313,90342509	No	Yes	No	bcc_52159|Cycle_0|Type_1	29,31	90341164,90342509	psi1:0.8,psi2:0.837209302326	C1_4,C2_36	C1_1,C2_7	Yes
ENSG00000226742	HSBP1L1	chr18:77726647-77728125	+	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):77728089,77726678	31,37	77726678,77728089	No	No	No	bcc_18709|Cycle_0|Type_1	31,31	77726678,77728095	psi1:1.0,psi2:0.969696969697	C1_1,C2_32	C1_0,C2_1	(AT:77726678,AC:77728089);(AT:77726678,AG:77728095)
ENSG00000117525	F3	chr1:94996123-94998673	-	ES	160	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,160,28	94996152,94997877,94998036,94998646	No	No	No	bcc_26673|Cycle_0|Type_1	29,28	94996152,94998646	psi1:0.914332784185,psi2:1.0	C1_555,C2_6	C1_52,C2_0	Yes
ENSG00000182670	TTC3	chr21:38529178-38532031	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,54,31	38529208,38529463,38529516,38532001	No	No	No	bcc_38885|Cycle_0|Type_1	30,31	38529208,38532001	psi1:0.166666666667,psi2:0.190476190476	C1_6,C2_4	C1_30,C2_17	Yes
ENSG00000169714	CNBP	chr3:128890090-128890319	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	128890123,128890289	No	No	No	bcc_14250|Cycle_0|Type_1	30,31	128890120,128890289	psi1:0.28,psi2:0.253164556962	C1_49,C2_60	C1_126,C2_177	(AC:128890289,CT:128890120);(AC:128890289,CA:128890123)
ENSG00000009724	MASP2	chr1:11086875-11090263	-	altA	800	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):11087705,11090233	830,31	11087705,11090233	No	No	No	bcc_28423|Cycle_3|Type_1	30,31	11086905,11090233	psi1:1.0,psi2:0.975083056478	C1_22,C2_587	C1_0,C2_15	Yes
ENSG00000013561	RNF14	chr5:141353276-141357897	+	ES	152	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,152,30	141353307,141354369,141354520,141357868	No	Yes	No	bcc_50866|Cycle_9|Type_1	31,30	141353307,141357868	psi1:0.949152542373,psi2:0.961538461538	C1_56,C2_50	C1_3,C2_2	Yes
ENSG00000138074	SLC5A6	chr2:27427396-27427689	-	altA	31	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):27427458,27427659	62,31	27427458,27427659	No	No	No	bcc_46395|Cycle_1|Type_1	31,31	27427427,27427659	psi1:1.0,psi2:0.958333333333	C1_1,C2_46	C1_0,C2_2	Yes
ENSG00000131051	RBM39	chr20:34326911-34328776	-	ES	73	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,73,31	34326939,34328447,34328519,34328746	No	No	No	bcc_15917|Cycle_0|Type_1	28,31	34326939,34328746	psi1:0.740740740741,psi2:0.714285714286	C1_20,C2_15	C1_7,C2_6	Yes
ENSG00000064651	SLC12A2	chr5:127510327-127514285	+	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,48,27	127510358,127512797,127512844,127514259	No	No	No	bcc_14461|Cycle_0|Type_1	31,27	127510358,127514259	psi1:0.540540540541,psi2:0.6	C1_40,C2_3	C1_34,C2_2	(GC:127512844,AG:127514259);(GT:127510358,AG:127512797);(GT:127510358,AG:127514259)
ENSG00000116791	CRYZ	chr1:75180285-75188832	-	ES	164	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,164,31	75180314,75184893,75185056,75188802	No	No	No	bcc_43669|Cycle_0|Type_1	29,31	75180314,75188802	psi1:1.0,psi2:0.973333333333	C1_7,C2_219	C1_0,C2_6	Yes
ENSG00000060656	PTPRU	chr1:29638028-29638184	+	altD	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	37,30	29638065,29638155	No	No	No	bcc_65824|Cycle_0|Type_1	28,30	29638056,29638155	psi1:0.6,psi2:0.571428571429	C1_3,C2_4	C1_2,C2_3	Yes
ENSG00000171307	ZDHHC16	chr10:99213390-99214499	+	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,48,29	99213420,99213556,99213603,99214471	No	Yes	No	bcc_42497|Cycle_0|Type_1	30,29	99213420,99214471	psi1:0.75,psi2:0.785714285714	C1_3,C2_22	C1_1,C2_6	Yes
ENSG00000112335	SNX3	chr6:108544218-108582060	-	altD	66	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,97	108544249,108581964	No	No	No	bcc_45290|Cycle_0|Type_1	31,31	108544249,108582030	psi1:0.934210526316,psi2:0.919191919192	C1_71,C2_91	C1_5,C2_8	Yes
ENSG00000099834	CDHR5	chr11:618082-619502	-	ES_MULTI	241	Yes	Yes	protein_coding	5_ss_annotated_(over_6_ss):618599,619306,619474,619390,618111	29,156,85,29	618111,618599,618754,619306,619390,619474	No	Yes	Yes	bcc_62344|Cycle_122|Type_1	29,29	618111,619474	psi1:1.0,psi2:0.938271604938	C1_1,C2_76	C1_0,C2_5	Yes
ENSG00000089597	GANAB	chr11:62400955-62402323	-	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,66,31	62400986,62401782,62401847,62402293	No	No	No	bcc_7830|Cycle_0|Type_1	31,31	62400986,62402293	psi1:0.294117647059,psi2:0.265306122449	C1_5,C2_13	C1_12,C2_36	Yes
ENSG00000168309	FAM107A	chr3:58555561-58563066	-	ES	98	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,98,31	58555592,58556053,58556150,58563036	No	No	No	bcc_26092|Cycle_0|Type_1	31,31	58555592,58563036	psi1:0.112852664577,psi2:0	C1_36,C2_0	C1_283,C2_2	Yes
ENSG00000087152	ATXN7L3	chr17:42273418-42274304	-	altA	21	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	50,23,8	42273468,42273764,42273786,42274297	No	Yes	No	bcc_10094|Cycle_7|Type_1	29,23,8	42273447,42273764,42273786,42274297	psi1:0.302325581395,psi2:0.333333333333	C1_13,C2_4	C1_30,C2_8	Yes
ENSG00000135506	OS9	chr12:58109722-58109904	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	58109753,58109872	No	No	No	bcc_45815|Cycle_0|Type_1	31,30	58109753,58109875	psi1:0.315789473684,psi2:0.279661016949	C1_6,C2_33	C1_13,C2_85	Yes
ENSG00000264672	RP11-112H10.4	chr17:56597817-56598134	-	IR	257	Yes	Yes	antisense	no_known_ss	317	-	No	No	No	bcc_5696|Cycle_0|Type_1	29,31	56597846,56598104	psi1:0.177419354839,psi2:0.125	C1_66,C2_2	C1_306,C2_14	Yes
ENSG00000126214	KLC1	chr14:104145824-104152005	+	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,51,31	104145855,104151323,104151373,104151975	No	Yes	No	bcc_42941|Cycle_0|Type_1	31,31	104145855,104151975	psi1:0.930348258706,psi2:1.0	C1_187,C2_2	C1_14,C2_0	Yes
ENSG00000107902	LHPP	chr10:126186669-126301860	+	ES	92	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,92,28	126186697,126205749,126205840,126301833	No	No	No	bcc_1471|Cycle_0|Type_1	28,28	126186697,126301833	psi1:0.916666666667,psi2:0.931034482759	C1_22,C2_27	C1_2,C2_2	Yes
ENSG00000122566	HNRNPA2B1	chr7:26230051-26230705	-	IR	595	Yes	-	protein_coding	no_known_ss	654	-	No	Yes	No	bcc_6799|Cycle_2|Type_1	29,30	26230080,26230676	psi1:0.945652173913,psi2:0.957264957265	C1_87,C2_112	C1_5,C2_5	(GC:26230676,CT:26230080)
ENSG00000182196	ARL6IP4	chr12:123465782-123466147	+	altD	33	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	64,30	123465846,123466118	No	Yes	No	bcc_899|Cycle_13|Type_1	31,30	123465813,123466118	psi1:0.833333333333,psi2:0.8125	C1_10,C2_13	C1_2,C2_3	Yes
ENSG00000123240	OPTN	chr10:13158310-13160936	+	altA	18	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,49	13158340,13160888	No	No	No	bcc_10105|Cycle_0|Type_1	30,31	13158340,13160906	psi1:0.824561403509,psi2:0.848484848485	C1_94,C2_28	C1_20,C2_5	Yes
ENSG00000103876	FAH	chr15:80460629-80464533	+	altA	13	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):80460658,80464491	29,43	80460658,80464491	No	Yes	No	bcc_45211|Cycle_1|Type_1	29,30	80460658,80464504	psi1:1.0,psi2:0.962962962963	C1_2,C2_104	C1_0,C2_4	Yes
ENSG00000143612	C1orf43	chr1:154185069-154186963	-	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,31	154185100,154186369,154186422,154186933	No	No	No	bcc_49729|Cycle_0|Type_1	31,31	154185100,154186933	psi1:0.942857142857,psi2:0.929648241206	C1_132,C2_185	C1_8,C2_14	Yes
ENSG00000198848	CES1	chr16:55844889-55846845	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	55844922,55846815	No	No	No	bcc_51344|Cycle_0|Type_1	30,31	55844919,55846815	psi1:1.0,psi2:0.732824427481	C1_2,C2_768	C1_0,C2_280	Yes
ENSG00000071537	SEL1L	chr14:81972493-81993107	-	altA	63	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	92,31	81972585,81993077	No	No	No	bcc_8811|Cycle_0|Type_1	29,31	81972522,81993077	psi1:0.952380952381,psi2:0.962962962963	C1_20,C2_26	C1_1,C2_1	Yes
ENSG00000105518	TMEM205	chr19:11456275-11456913	+	IR	579	No	-	protein_coding	no_known_ss	638	-	No	Yes	No	bcc_63141|Cycle_16|Type_1	29,30	11456304,11456884	psi1:0.985915492958,psi2:0.978260869565	C1_140,C2_45	C1_2,C2_1	(CT:11456304,AC:11456884)
ENSG00000164985	PSIP1	chr9:15471143-15472660	-	altA	1372	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):15471174,15472630	1403,31	15472546,15472630	No	Yes	No	bcc_9325|Cycle_28|Type_1	31,31	15471174,15472630	psi1:0.985111662531,psi2:1.0	C1_397,C2_19	C1_6,C2_0	Yes
ENSG00000007392	LUC7L	chr16:258156-270677	-	ES	64	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,64,30	258187,258600,258663,270648	No	No	No	bcc_53701|Cycle_0|Type_1	31,30	258187,270648	psi1:0.8,psi2:0.777777777778	C1_4,C2_7	C1_1,C2_2	Yes
ENSG00000145730	PAM	chr5:102355516-102363914	+	ES	204	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,204,29	102355547,102360835,102361038,102363886	No	Yes	No	bcc_49320|Cycle_0|Type_1	31,29	102355547,102363886	psi1:0.920634920635,psi2:0.9	C1_116,C2_18	C1_10,C2_2	(GT:102355547,AG:102360835);(GT:102355547,AG:102363886);(GC:102361038,AG:102363886)
ENSG00000104938	CLEC4M	chr19:7833898-7834289	+	IR	329	Yes	-	protein_coding	no_known_ss	391	-	No	No	No	bcc_59120|Cycle_6|Type_1	31,31	7833929,7834259	psi1:1.0,psi2:0.92531120332	C1_2,C2_223	C1_0,C2_18	Yes
ENSG00000156976	EIF4A2	chr3:186502454-186503700	+	ES	140	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,140,29	186502485,186502751,186502890,186503672	No	No	No	bcc_31116|Cycle_0|Type_1	31,29	186502485,186503672	psi1:0.949484536082,psi2:0.931818181818	C1_921,C2_123	C1_49,C2_9	Yes
ENSG00000134243	SORT1	chr1:109888469-109890135	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,31	109888503,109890105	No	No	No	bcc_3574|Cycle_0|Type_1	31,31	109888500,109890105	psi1:0.739495798319,psi2:0.666666666667	C1_88,C2_2	C1_31,C2_1	Yes
ENSG00000081189	MEF2C	chr5:88047829-88100445	-	ES	144	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,144,31	88047860,88057002,88057145,88100415	No	No	No	bcc_32515|Cycle_0|Type_1	31,31	88047860,88100415	psi1:0.977142857143,psi2:1.0	C1_171,C2_5	C1_4,C2_0	Yes
ENSG00000099256	PRTFDC1	chr10:25140362-25160956	-	ES_MULTI	148	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,47,83,18,30	25140393,25144247,25144293,25145842,25145924,25147321,25147338,25160927	No	Yes	No	bcc_52581|Cycle_0|Type_1	31,30	25140393,25160927	psi1:0.95652173913,psi2:1.0	C1_66,C2_1	C1_3,C2_0	Yes
ENSG00000240771	ARHGEF25	chr12:58007512-58008144	+	ES	104	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,104,31	58007543,58007799,58007902,58008114	No	No	No	bcc_7670|Cycle_0|Type_1	31,31	58007543,58008114	psi1:0.957142857143,psi2:1.0	C1_67,C2_1	C1_3,C2_0	Yes
ENSG00000196504	PRPF40A	chr2:153533288-153535896	-	ES	54	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	5,25,54,31	153533293,153533965,153533989,153535570,153535623,153535866	No	No	No	bcc_15934|Cycle_0|Type_1	5,25,31	153533293,153533965,153533989,153535866	psi1:0.838709677419,psi2:0.857142857143	C1_26,C2_18	C1_5,C2_3	Yes
ENSG00000155506	LARP1	chr5:154173430-154173689	+	altD	99	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):154173560,154173660	130,30	154173560,154173660	No	No	No	bcc_12425|Cycle_0|Type_1	31,30	154173461,154173660	psi1:0.857142857143,psi2:0.875	C1_12,C2_7	C1_2,C2_1	Yes
ENSG00000111652	COPS7A	chr12:6833956-6837417	+	ES	76	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,76,29	6833984,6837092,6837167,6837389	No	No	No	bcc_6512|Cycle_0|Type_1	28,29	6833984,6837389	psi1:0.898305084746,psi2:0.913043478261	C1_53,C2_42	C1_6,C2_4	Yes
ENSG00000138668	HNRNPD	chr4:83276523-83277979	-	ES	147	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,147,31	83276554,83277690,83277836,83277949	No	No	No	bcc_44264|Cycle_0|Type_1	31,31	83276554,83277949	psi1:0.660980810235,psi2:0.632	C1_310,C2_79	C1_159,C2_46	Yes
ENSG00000100554	ATP6V1D	chr14:67817376-67826405	-	ES	118	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,118,31	67817407,67819640,67819757,67826375	No	No	No	bcc_48243|Cycle_0|Type_1	31,31	67817407,67826375	psi1:0.975609756098,psi2:0.983333333333	C1_120,C2_59	C1_3,C2_1	Yes
ENSG00000164615	CAMLG	chr5:134074451-134086478	+	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,66,30	134074482,134079677,134079742,134086449	No	Yes	No	bcc_32091|Cycle_1|Type_1	31,30	134074482,134086449	psi1:0.858974358974,psi2:0.833333333333	C1_67,C2_10	C1_11,C2_2	Yes
ENSG00000204130	RUFY2	chr10:70139250-70143584	-	ES	168	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,168,30	70139278,70140989,70141156,70143555	No	No	No	bcc_36869|Cycle_0|Type_1	28,30	70139278,70143555	psi1:0.979797979798,psi2:1.0	C1_97,C2_3	C1_2,C2_0	Yes
ENSG00000164985	PSIP1	chr9:15471143-15472660	-	IR	1455	No	Yes	protein_coding	no_known_ss	1517	-	No	Yes	No	bcc_9325|Cycle_51|Type_1	31,31	15471174,15472630	psi1:0.985680190931,psi2:1.0	C1_413,C2_18	C1_6,C2_0	Yes
ENSG00000174827	PDZK1	chr1:145762300-145763824	+	altA	225	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,255	145762329,145763570	No	No	No	bcc_43947|Cycle_1|Type_1	29,30	145762329,145763795	psi1:1.0,psi2:0.960784313725	C1_3,C2_196	C1_0,C2_8	Yes
ENSG00000272794	PCDHA9	chr5:140389282-140389780	-	IR	437	Yes	Yes	protein_coding	no_known_ss	498	-	No	No	No	bcc_40205|Cycle_0|Type_1	31,30	140389313,140389751	psi1:0.946808510638,psi2:1.0	C1_89,C2_1	C1_5,C2_0	(AG:140389751,GT:140389313)
ENSG00000146416	AIG1	chr6:143486289-143654446	+	ES	116	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,116,28	143486320,143605247,143605362,143654419	No	No	No	bcc_13711|Cycle_0|Type_1	31,28	143486320,143654419	psi1:0.971830985915,psi2:0.960784313725	C1_69,C2_245	C1_2,C2_10	Yes
ENSG00000242797	GLYCTK-AS1	chr3:52326555-52327090	+	IR	476	Yes	Yes	processed_transcript	no_known_ss	535	-	No	No	No	bcc_56072|Cycle_0|Type_1	30,29	52326585,52327062	psi1:1.0,psi2:0.909090909091	C1_1,C2_160	C1_0,C2_16	Yes
ENSG00000165669	FAM204A	chr10:120095904-120101812	-	ES	201	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,201,31	120095935,120101239,120101439,120101782	No	No	No	bcc_31255|Cycle_0|Type_1	31,31	120095935,120101782	psi1:0.846153846154,psi2:0.863636363636	C1_33,C2_19	C1_6,C2_3	Yes
ENSG00000139793	MBNL2	chr13:97999290-98009764	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,29	97999321,98009050,98009103,98009736	No	No	No	bcc_38901|Cycle_0|Type_1	31,29	97999321,98009736	psi1:0.257142857143,psi2:0.235294117647	C1_9,C2_4	C1_26,C2_13	Yes
ENSG00000123737	EXOSC9	chr4:122735172-122737552	+	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,51,29	122735202,122737299,122737349,122737524	No	No	No	bcc_40346|Cycle_0|Type_1	30,29	122735202,122737524	psi1:0.3,psi2:0.277777777778	C1_3,C2_5	C1_7,C2_13	Yes
ENSG00000172500	FIBP	chr11:65652627-65653031	-	altD	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,52	65652657,65652980	No	No	No	bcc_47214|Cycle_0|Type_1	30,31	65652657,65653001	psi1:0.0520833333333,psi2:0.0645161290323	C1_5,C2_2	C1_91,C2_29	Yes
ENSG00000134744	ZCCHC11	chr1:52889556-52891051	-	altA	89	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	118,31	52889674,52891021	No	No	No	bcc_69729|Cycle_0|Type_1	29,31	52889585,52891021	psi1:0.875,psi2:0.857142857143	C1_7,C2_18	C1_1,C2_3	Yes
ENSG00000204438	GPANK1	chr6:31632324-31632648	-	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	33,31	31632357,31632618	No	No	No	bcc_58732|Cycle_0|Type_1	30,31	31632354,31632618	psi1:0.181818181818,psi2:0.2	C1_2,C2_2	C1_9,C2_8	Yes
ENSG00000141485	SLC13A5	chr17:6589630-6594128	-	ES	138	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,138,31	6589657,6590848,6590985,6594098	No	No	No	bcc_48118|Cycle_0|Type_1	27,31	6589657,6594098	psi1:1.0,psi2:0.888185654008	C1_2,C2_421	C1_0,C2_53	Yes
ENSG00000008441	NFIX	chr19:13192639-13201143	+	ES	148	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,148,31	13192669,13198803,13198950,13201113	No	No	No	bcc_35209|Cycle_0|Type_1	30,31	13192669,13201113	psi1:0.130081300813,psi2:0.166666666667	C1_16,C2_1	C1_107,C2_5	Yes
ENSG00000078140	UBE2K	chr4:39699979-39747400	+	ES	94	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,94,29	39700010,39739040,39739133,39747372	No	No	No	bcc_22884|Cycle_0|Type_1	31,29	39700010,39747372	psi1:0.972067039106,psi2:0.979166666667	C1_174,C2_141	C1_5,C2_3	(GT:39700010,AG:39747372);(GT:39700010,AG:39739040);(GC:39739133,AG:39747372)
ENSG00000162385	MAGOH	chr1:53694597-53701278	-	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,111,30	53694626,53699214,53699324,53701249	No	No	No	bcc_41027|Cycle_0|Type_1	29,30	53694626,53701249	psi1:0.870588235294,psi2:0.854838709677	C1_74,C2_53	C1_11,C2_9	Yes
ENSG00000102882	MAPK3	chr16:30125999-30127985	-	ES	51	No	-	protein_coding	all_splice_sites_known_(4_ss)	30,51,29	30126029,30126916,30126966,30127957	No	No	No	bcc_64621|Cycle_0|Type_1	30,29	30126029,30127957	psi1:0.169811320755,psi2:0.2	C1_9,C2_1	C1_44,C2_4	Yes
ENSG00000118960	HS1BP3	chr2:20792214-20792899	-	altA	310	Yes	-	protein_coding	1_ss_annotated_(over_3_ss):20792554	340,31	20792554,20792869	No	Yes	No	bcc_49787|Cycle_4|Type_1	30,31	20792244,20792869	psi1:1.0,psi2:0.956043956044	C1_1,C2_87	C1_0,C2_4	Yes
ENSG00000099308	MAST3	chr19:18257797-18258281	+	altD	27	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):18257827,18258253	57,29	18257854,18258253	No	No	No	bcc_73731|Cycle_0|Type_1	30,29	18257827,18258253	psi1:0.458333333333,psi2:0.5	C1_11,C2_1	C1_13,C2_1	Yes
ENSG00000154813	DPH3	chr3:16302305-16306304	-	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,75,29	16302336,16305662,16305736,16306276	No	No	No	bcc_19074|Cycle_1|Type_1	31,29	16302336,16306276	psi1:0.714285714286,psi2:0.6875	C1_5,C2_22	C1_2,C2_10	Yes
ENSG00000005175	RPAP3	chr12:48064097-48073517	-	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,102,31	48064128,48073276,48073377,48073487	No	No	No	bcc_49515|Cycle_0|Type_1	31,31	48064128,48073487	psi1:0.85,psi2:0.833333333333	C1_17,C2_10	C1_3,C2_2	Yes
ENSG00000118960	HS1BP3	chr2:20792214-20792899	-	IR	624	No	-	protein_coding	no_known_ss	685	-	No	Yes	No	bcc_49787|Cycle_3|Type_1	30,31	20792244,20792869	psi1:1.0,psi2:0.974683544304	C1_3,C2_154	C1_0,C2_4	Yes
ENSG00000258289,ENSG00000257365,ENSG00000125954	CHURC1,FNTB,CHURC1-FNTB	chr14:65390813-65398886	+	ES	71	Yes	Yes	protein_coding,protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,71,31	65390844,65392728,65392798,65398856	No	Yes	No	bcc_5737|Cycle_0|Type_1	31,31	65390844,65398856	psi1:0.943181818182,psi2:0.93137254902	C1_83,C2_190	C1_5,C2_14	Yes
ENSG00000137700	SLC37A4	chr11:118896761-118897676	-	ES	86	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,86,30	118896790,118897313,118897398,118897647	No	No	No	bcc_56524|Cycle_0|Type_1	29,30	118896790,118897647	psi1:1.0,psi2:0.959537572254	C1_2,C2_166	C1_0,C2_7	Yes
ENSG00000204568	MRPS18B	chr6:30587735-30592689	+	ES	67	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,67,30	30587766,30590609,30590675,30592660	No	No	No	bcc_27204|Cycle_0|Type_1	31,30	30587766,30592660	psi1:0.942307692308,psi2:0.952755905512	C1_49,C2_121	C1_3,C2_6	Yes
ENSG00000066084	DIP2B	chr12:51069200-51072492	+	altD	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):51072462,51069231	34,31	51069234,51072462	No	No	No	bcc_61801|Cycle_0|Type_1	31,31	51069231,51072462	psi1:0.125,psi2:0.111111111111	C1_1,C2_1	C1_7,C2_8	Yes
ENSG00000054118	THRAP3	chr1:36766654-36767187	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):36767154,36766685	31,34	36766685,36767154	No	No	No	bcc_8870|Cycle_1|Type_1	31,31	36766685,36767157	psi1:0.556962025316,psi2:0.533333333333	C1_44,C2_16	C1_35,C2_14	Yes
ENSG00000164985	PSIP1	chr9:15471305-15472660	-	altA	1210	Yes	Yes	protein_coding	1_ss_annotated_(over_3_ss):15472630	1241,31	15472546,15472630	No	Yes	No	bcc_9325|Cycle_34|Type_1	31,31	15471336,15472630	psi1:0.98976109215,psi2:1.0	C1_290,C2_13	C1_3,C2_0	(AC:15472630,CA:15471336);(AC:15472630,CT:15472546)
ENSG00000179526	SHARPIN	chr8:145153870-145154210	-	ES	119	Yes	Yes	protein_coding	3_ss_annotated_(over_4_ss):145153984,145153897,145154180	27,119,31	145153897,145153984,145154102,145154180	No	Yes	No	bcc_61871|Cycle_3|Type_1	27,31	145153897,145154180	psi1:0.9,psi2:0.914285714286	C1_9,C2_32	C1_1,C2_3	Yes
ENSG00000115977	AAK1	chr2:69702604-69704041	-	altA	462	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):69704012,69703095	491,30	69703095,69704012	No	No	No	bcc_55281|Cycle_0|Type_1	29,30	69702633,69704012	psi1:0.979166666667,psi2:1.0	C1_94,C2_2	C1_2,C2_0	Yes
ENSG00000115685	PPP1R7	chr2:242089931-242097251	+	ES	129	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,129,30	242089962,242092891,242093019,242097222	No	No	No	bcc_46974|Cycle_0|Type_1	31,30	242089962,242097222	psi1:0.934426229508,psi2:0.923076923077	C1_114,C2_48	C1_8,C2_4	Yes
ENSG00000123349	PFDN5	chr12:53689392-53691664	+	ES_MULTI	135	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,103,32,31	53689423,53689623,53689725,53690028,53690059,53691634	No	No	No	bcc_12773|Cycle_0|Type_1	31,31	53689423,53691634	psi1:0.972299168975,psi2:0.978586723769	C1_351,C2_457	C1_10,C2_10	Yes
ENSG00000131724	IL13RA1	chrX:117875088-117883648	+	ES	139	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,139,28	117875119,117880917,117881055,117883621	No	No	No	bcc_8422|Cycle_0|Type_1	31,28	117875119,117883621	psi1:0.965517241379,psi2:0.956043956044	C1_28,C2_87	C1_1,C2_4	Yes
ENSG00000145730	PAM	chr5:102361007-102363917	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	102361038,102363886	No	Yes	No	bcc_49320|Cycle_4|Type_1	31,29	102361038,102363889	psi1:0.475,psi2:0.5	C1_19,C2_5	C1_21,C2_5	(GC:102361038,AG:102363889);(GC:102361038,AG:102363886)
ENSG00000062716	VMP1	chr17:57812803-57816228	+	ES	91	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,91,31	57812834,57814814,57814904,57816198	No	No	No	bcc_45420|Cycle_0|Type_1	31,31	57812834,57816198	psi1:0.986486486486,psi2:0.981481481481	C1_73,C2_53	C1_1,C2_1	Yes
ENSG00000080822,ENSG00000080819	CLDND1,CPOX	chr3:98240256-98241723	-	ES	44	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,44,31	98240286,98240497,98240540,98241693	No	Yes	No	bcc_34239|Cycle_4|Type_1	30,31	98240286,98241693	psi1:0.492254733219,psi2:0.6	C1_286,C2_3	C1_295,C2_2	Yes
ENSG00000257379,ENSG00000197111	RP11-793H13.8,PCBP2	chr12:53856320-53861035	+	ES_MULTI	135	No	Yes	processed_transcript,protein_coding	all_splice_sites_known_(6_ss)	31,93,42,31	53856351,53858544,53858636,53859716,53859757,53861005	No	Yes	No	bcc_11408|Cycle_4|Type_1	31,31	53856351,53861005	psi1:0.946127946128,psi2:0.954674220963	C1_281,C2_337	C1_16,C2_16	Yes
ENSG00000186298	PPP1CC	chr12:111157979-111158940	-	altAD	898	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):111158009,111158910	304,655	111158283,111158286	No	Yes	No	bcc_28369|Cycle_3|Type_1	30,31	111158009,111158910	psi1:0.985743380855,psi2:0.980544747082	C1_484,C2_252	C1_7,C2_5	(AA:111158286,AA:111158283);(AC:111158910,CT:111158009)
ENSG00000106258	CYP3A5	chr7:99270508-99272186	-	IR	1617	No	Yes	protein_coding	no_known_ss	1678	-	No	Yes	No	bcc_19960|Cycle_7|Type_1	30,31	99270538,99272156	psi1:1.0,psi2:0.9343832021	C1_2,C2_356	C1_0,C2_25	Yes
ENSG00000164985	PSIP1	chr9:15471305-15472660	+	IR	1293	No	Yes	protein_coding	no_known_ss	1355	-	No	Yes	No	bcc_9325|Cycle_11|Type_1	31,31	15471336,15472630	psi1:0.990291262136,psi2:1.0	C1_306,C2_12	C1_3,C2_0	(CA:15471336,AC:15472630)
ENSG00000111011	RSRC2	chr12:123003547-123005962	-	ES_altA	100	Yes	Yes	protein_coding	all_splice_sites_known_(5_ss)	51,78,31	123003598,123005051,123005128,123005932	No	Yes	No	bcc_41940|Cycle_1|Type_1	29,31	123003576,123005932	psi1:0.162790697674,psi2:0.142857142857	C1_7,C2_1	C1_36,C2_6	Yes
ENSG00000162882	HAAO	chr2:42995038-42997313	-	ES	146	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,146,31	42995068,42996853,42996998,42997283	No	No	No	bcc_68063|Cycle_0|Type_1	30,31	42995068,42997283	psi1:1.0,psi2:0.955223880597	C1_1,C2_128	C1_0,C2_6	Yes
ENSG00000100519	PSMC6	chr14:53187878-53190711	+	altA	160	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):53190683,53187908	30,189	53187908,53190523	No	No	No	bcc_53154|Cycle_0|Type_1	30,29	53187908,53190683	psi1:0.16049382716,psi2:0.147058823529	C1_13,C2_15	C1_68,C2_87	Yes
ENSG00000109113	RAB34	chr17:27042110-27042267	-	altD	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,55	27042140,27042213	No	No	No	bcc_65901|Cycle_0|Type_1	30,31	27042140,27042237	psi1:0.842105263158,psi2:0.857142857143	C1_16,C2_6	C1_3,C2_1	Yes
ENSG00000205403	CFI	chr4:110673630-110681456	-	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,21,31	110673659,110678919,110678939,110681426	No	Yes	No	bcc_28100|Cycle_4|Type_1	29,31	110673659,110681426	psi1:1.0,psi2:0.948	C1_3,C2_474	C1_0,C2_26	Yes
ENSG00000179526	SHARPIN	chr8:145153870-145154208	-	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,125,29	145153897,145153984,145154108,145154180	No	Yes	No	bcc_61871|Cycle_1|Type_1	27,29	145153897,145154180	psi1:0.923076923077,psi2:0.911111111111	C1_12,C2_41	C1_1,C2_4	Yes
ENSG00000143258	USP21	chr1:161134011-161134354	+	IR	283	Yes	Yes	protein_coding	no_known_ss	343	-	No	No	No	bcc_67334|Cycle_0|Type_1	29,31	161134040,161134324	psi1:0.625,psi2:0.6	C1_20,C2_3	C1_12,C2_2	Yes
ENSG00000122566	HNRNPA2B1	chr7:26231928-26232144	-	IR	156	No	-	protein_coding	no_known_ss	216	-	No	Yes	No	bcc_6802|Cycle_4|Type_1	30,30	26231958,26232115	psi1:0.127692307692,psi2:0.115869017632	C1_83,C2_46	C1_567,C2_351	Yes
ENSG00000121022	COPS5	chr8:67971649-67974119	-	altD	8	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):67971680,67974089	31,39	67971680,67974081	No	No	No	bcc_56213|Cycle_0|Type_1	31,31	67971680,67974089	psi1:0.103448275862,psi2:0.114285714286	C1_3,C2_4	C1_26,C2_31	Yes
ENSG00000109846	CRYAB	chr11:111781145-111781388	-	IR	184	Yes	-	protein_coding	no_known_ss	243	-	No	No	No	bcc_48210|Cycle_0|Type_1	28,31	111781173,111781358	psi1:0.975757575758,psi2:1.0	C1_161,C2_2	C1_4,C2_0	Yes
ENSG00000087087	SRRT	chr7:100485449-100485705	+	altA	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,43	100485480,100485663	No	No	No	bcc_53234|Cycle_0|Type_1	31,31	100485480,100485675	psi1:0.761904761905,psi2:0.777777777778	C1_16,C2_7	C1_5,C2_2	(GT:100485480,TG:100485663);(GT:100485480,AG:100485675)
ENSG00000040341,ENSG00000258677	STAU2,RP11-463D19.2	chr8:74601019-74650549	-	ES	131	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	29,131,31	74601048,74621267,74621397,74650519	No	Yes	No	bcc_19663|Cycle_1|Type_1	29,31	74601048,74650519	psi1:0.349206349206,psi2:0.375	C1_22,C2_3	C1_41,C2_5	Yes
ENSG00000145362	ANK2	chr4:114294299-114302641	+	ES_MULTI	348	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,165,183,29	114294329,114294441,114294605,114295920,114296102,114302613	No	Yes	Yes	bcc_29784|Cycle_9|Type_1	30,29	114294329,114302613	psi1:0.93253968254,psi2:1.0	C1_235,C2_1	C1_17,C2_0	Yes
ENSG00000114378	HYAL1	chr3:50339607-50340927	-	altA	775	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	804,31	50340411,50340897	No	No	No	bcc_57730|Cycle_0|Type_1	29,31	50339636,50340897	psi1:1.0,psi2:0.983263598326	C1_4,C2_235	C1_0,C2_4	Yes
ENSG00000164038	SLC9B2	chr4:103971510-103987514	-	ES	171	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,171,31	103971539,103978958,103979128,103987484	No	No	No	bcc_12100|Cycle_0|Type_1	29,31	103971539,103987484	psi1:0.941176470588,psi2:0.95	C1_112,C2_38	C1_7,C2_2	Yes
ENSG00000104852	SNRNP70	chr19:49610939-49611107	+	altA	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,56	49610969,49611052	No	No	No	bcc_52303|Cycle_0|Type_1	30,29	49610969,49611079	psi1:0.583333333333,psi2:0.6	C1_14,C2_9	C1_10,C2_6	Yes
ENSG00000105426	PTPRS	chr19:5218512-5219351	-	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,12,31	5218543,5218798,5218809,5219321	No	No	No	bcc_17991|Cycle_0|Type_1	31,31	5218543,5219321	psi1:0.6875,psi2:0.666666666667	C1_11,C2_2	C1_5,C2_1	Yes
ENSG00000249915	PDCD6	chr5:306839-311437	+	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	36,30	306875,311408	No	No	No	bcc_48190|Cycle_0|Type_1	30,30	306869,311408	psi1:0.780487804878,psi2:0.766666666667	C1_32,C2_23	C1_9,C2_7	Yes
ENSG00000109466	KLHL2	chr4:166239090-166243214	+	ES	64	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,64,31	166239121,166242464,166242527,166243184	No	No	No	bcc_48298|Cycle_0|Type_1	31,31	166239121,166243184	psi1:0.171875,psi2:0.157894736842	C1_11,C2_3	C1_53,C2_16	Yes
ENSG00000130988	RGN	chrX:46943969-46951489	+	ES_MULTI	348	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,216,132,30	46943999,46949175,46949390,46951077,46951208,46951460	No	Yes	No	bcc_50212|Cycle_0|Type_1	30,30	46943999,46951460	psi1:0.9375,psi2:0.924603174603	C1_30,C2_233	C1_2,C2_19	Yes
ENSG00000162959,ENSG00000162961	MEMO1,DPY30	chr2:32108501-32143025	-	ES	143	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	30,143,31	32108531,32117061,32117203,32142995	No	Yes	No	bcc_49522|Cycle_6|Type_1	30,31	32108531,32142995	psi1:0.947368421053,psi2:0.954545454545	C1_18,C2_42	C1_1,C2_2	Yes
ENSG00000162819	BROX	chr1:222903488-222905999	+	ES	160	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,160,30	222903519,222904699,222904858,222905970	No	No	No	bcc_24048|Cycle_0|Type_1	31,30	222903519,222905970	psi1:0.954545454545,psi2:0.947368421053	C1_42,C2_18	C1_2,C2_1	Yes
ENSG00000102081	FMR1	chrX:147024815-147026492	+	altA	39	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,68	147024846,147026425	No	Yes	No	bcc_34664|Cycle_2|Type_1	31,29	147024846,147026464	psi1:0.769230769231,psi2:0.75	C1_20,C2_3	C1_6,C2_1	Yes
ENSG00000005810	MYCBP2	chr13:77644815-77650924	-	altD	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,39	77644846,77650886	No	No	No	bcc_31678|Cycle_0|Type_1	31,30	77644846,77650895	psi1:0.478260869565,psi2:0.5	C1_11,C2_2	C1_12,C2_2	Yes
ENSG00000003756	RBM5	chr3:50154574-50154713	-	IR	78	No	Yes	protein_coding	no_known_ss	139	-	No	No	No	bcc_33790|Cycle_0|Type_1	30,31	50154604,50154683	psi1:0.178571428571,psi2:0.166666666667	C1_5,C2_3	C1_23,C2_15	(AG:50154683,GT:50154604)
ENSG00000159479	MED8	chr1:43850193-43850746	+	IR	493	Yes	Yes	protein_coding	no_known_ss	553	-	No	Yes	Yes	bcc_38762|Cycle_1|Type_1	30,30	43850223,43850717	psi1:0.973333333333,psi2:0.968	C1_73,C2_121	C1_2,C2_4	(CT:43850223,AC:43850717)
ENSG00000106976	DNM1	chr9:131013188-131016959	+	ES_altA	685	Yes	-	protein_coding	4_ss_annotated_(over_5_ss):131015416,131013219,131015380,131016933	31,37,675	131013219,131015380,131015416,131016285	No	Yes	No	bcc_57439|Cycle_4|Type_1	31,27	131013219,131016933	psi1:0.978947368421,psi2:1.0	C1_93,C2_1	C1_2,C2_0	Yes
ENSG00000106976	DNM1	chr9:131013188-131016959	+	ES_altA	682	Yes	-	protein_coding	all_splice_sites_known_(5_ss)	31,37,672	131013219,131015380,131015416,131016288	No	Yes	No	bcc_57439|Cycle_3|Type_1	31,27	131013219,131016933	psi1:0.978947368421,psi2:1.0	C1_93,C2_1	C1_2,C2_0	Yes
ENSG00000164896	FASTK	chr7:150773889-150774218	-	ES	115	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,115,31	150773919,150774000,150774114,150774188	No	No	No	bcc_50778|Cycle_0|Type_1	30,31	150773919,150774188	psi1:0.923076923077,psi2:0.913043478261	C1_12,C2_42	C1_1,C2_4	Yes
ENSG00000145362	ANK2	chr4:114294299-114302641	+	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,165,29	114294329,114294441,114294605,114302613	No	Yes	Yes	bcc_29784|Cycle_8|Type_1	30,29	114294329,114302613	psi1:0.940350877193,psi2:1.0	C1_268,C2_1	C1_17,C2_0	Yes
ENSG00000257379,ENSG00000197111	RP11-793H13.8,PCBP2	chr12:53856321-53859744	+	ES	93	No	Yes	processed_transcript,protein_coding	all_splice_sites_known_(4_ss)	30,93,29	53856351,53858544,53858636,53859716	No	Yes	No	bcc_11408|Cycle_0|Type_1	30,29	53856351,53859716	psi1:0.743772241993,psi2:0.756653992395	C1_209,C2_199	C1_72,C2_64	Yes
ENSG00000214078,ENSG00000244462	CPNE1,RBM12	chr20:34246874-34252712	-	altA	32	Yes	-	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	62,31	34246936,34252682	No	Yes	No	bcc_6829|Cycle_5|Type_1	30,31	34246904,34252682	psi1:0.65,psi2:0.666666666667	C1_13,C2_4	C1_7,C2_2	Yes
ENSG00000186298	PPP1CC	chr12:111157979-111158940	-	IR	900	No	Yes	protein_coding	no_known_ss	961	-	No	Yes	No	bcc_28369|Cycle_2|Type_1	30,31	111158009,111158910	psi1:0.985858585859,psi2:0.982078853047	C1_488,C2_274	C1_7,C2_5	Yes
ENSG00000134138	MEIS2	chr15:37184629-37187381	-	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,96,30	37184660,37186918,37187013,37187352	No	No	No	bcc_35640|Cycle_0|Type_1	31,30	37184660,37187352	psi1:0.647058823529,psi2:0.666666666667	C1_11,C2_2	C1_6,C2_1	Yes
ENSG00000113282	CLINT1	chr5:157216493-157218741	-	altA	54	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	82,31	157216575,157218711	No	No	No	bcc_35242|Cycle_4|Type_1	28,31	157216521,157218711	psi1:0.4,psi2:0.416666666667	C1_6,C2_20	C1_9,C2_28	Yes
ENSG00000112715	VEGFA	chr6:43746624-43752308	+	ES	132	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,132,31	43746655,43749693,43749824,43752278	No	Yes	No	bcc_39955|Cycle_6|Type_1	31,31	43746655,43752278	psi1:0.875,psi2:0.887640449438	C1_14,C2_79	C1_2,C2_10	Yes
ENSG00000141552	ANAPC11	chr17:79849686-79852372	+	ES	63	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,63,30	79849717,79851428,79851490,79852343	No	Yes	No	bcc_61328|Cycle_0|Type_1	31,30	79849717,79852343	psi1:0.916666666667,psi2:0.906976744186	C1_11,C2_39	C1_1,C2_4	Yes
ENSG00000060237	WNK1	chr12:971405-987407	+	ES	84	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,84,30	971436,980431,980514,987378	No	Yes	No	bcc_37125|Cycle_5|Type_1	31,30	971436,987378	psi1:0.571428571429,psi2:0.555555555556	C1_16,C2_5	C1_12,C2_4	Yes
ENSG00000106258	CYP3A5	chr7:99270274-99272186	-	altD	1749	No	-	protein_coding	all_splice_sites_known_(3_ss)	28,1780	99270302,99270407	No	Yes	No	bcc_19960|Cycle_1|Type_1	28,31	99270302,99272156	psi1:1.0,psi2:0.961904761905	C1_2,C2_404	C1_0,C2_16	Yes
ENSG00000198492	YTHDF2	chr1:29064819-29095471	+	ES	1584	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,1584,31	29064850,29068915,29070498,29095441	No	No	No	bcc_3169|Cycle_1|Type_1	31,31	29064850,29095441	psi1:0.97507788162,psi2:0.979166666667	C1_313,C2_329	C1_8,C2_7	Yes
ENSG00000148308	GTF3C5	chr9:135930166-135931428	+	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,21,30	135930196,135930331,135930351,135931399	No	No	No	bcc_28634|Cycle_0|Type_1	30,30	135930196,135931399	psi1:0.25,psi2:0.238095238095	C1_3,C2_5	C1_9,C2_16	Yes
ENSG00000062194	GPBP1	chr5:56509989-56526703	+	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,21,31	56510020,56517203,56517223,56526673	No	Yes	No	bcc_16024|Cycle_0|Type_1	31,31	56510020,56526673	psi1:0.21875,psi2:0.230769230769	C1_7,C2_3	C1_25,C2_10	Yes
ENSG00000106258	CYP3A5	chr7:99270272-99272186	-	IR	1853	Yes	Yes	protein_coding	no_known_ss	1914	-	No	Yes	No	bcc_19960|Cycle_3|Type_1	30,31	99270302,99272156	psi1:1.0,psi2:0.963553530752	C1_2,C2_423	C1_0,C2_16	Yes
ENSG00000125844	RRBP1	chr20:17623742-17639279	-	altD	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,39	17623772,17639241	No	No	No	bcc_45154|Cycle_0|Type_1	30,30	17623772,17639250	psi1:0.9,psi2:0.888888888889	C1_9,C2_48	C1_1,C2_6	Yes
ENSG00000227232	WASH7P	chr1:18032-24766	-	ES	99	No	-	pseudogene	all_splice_sites_known_(4_ss)	29,99,29	18061,18268,18366,24738	Yes	Yes	No	bcc_28878|Cycle_5|Type_1	29,29	18061,24738	psi1:0.936170212766,psi2:0.928571428571	C1_44,C2_13	C1_3,C2_1	Yes
ENSG00000132356	PRKAA1	chr5:40771935-40775542	-	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,45,31	40771965,40775030,40775074,40775512	No	No	No	bcc_29357|Cycle_0|Type_1	30,31	40771965,40775512	psi1:0.260869565217,psi2:0.272727272727	C1_6,C2_3	C1_17,C2_8	Yes
ENSG00000118418	HMGN3	chr6:79911414-79912023	-	altA	429	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):79911993,79911443	458,31	79911872,79911993	No	Yes	Yes	bcc_33987|Cycle_21|Type_1	29,31	79911443,79911993	psi1:0.536363636364,psi2:0.52380952381	C1_59,C2_33	C1_51,C2_30	Yes
ENSG00000135094	SDS	chr12:113831791-113836350	-	ES	228	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,228,31	113831821,113834970,113835197,113836320	No	No	No	bcc_59324|Cycle_0|Type_1	30,31	113831821,113836320	psi1:1.0,psi2:0.96484375	C1_1,C2_247	C1_0,C2_9	Yes
ENSG00000170632	ARMC10	chr7:102727180-102737751	+	ES	177	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,177,28	102727211,102732924,102733100,102737724	No	No	No	bcc_15429|Cycle_0|Type_1	31,28	102727211,102737724	psi1:0.919540229885,psi2:0.913043478261	C1_80,C2_63	C1_7,C2_6	Yes
ENSG00000029363	BCLAF1	chr6:136582584-136589330	-	ES	147	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,147,31	136582615,136588167,136588313,136589300	No	Yes	No	bcc_33675|Cycle_1|Type_1	31,31	136582615,136589300	psi1:0.922619047619,psi2:0.913043478261	C1_155,C2_21	C1_13,C2_2	Yes
ENSG00000176978	DPP7	chr9:140007545-140007842	-	ES	78	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):140007739,140007658,140007571,140007813	26,82,30	140007571,140007658,140007739,140007813	No	No	No	bcc_69758|Cycle_0|Type_1	26,34	140007571,140007809	psi1:0.952380952381,psi2:0.947368421053	C1_20,C2_18	C1_1,C2_1	Yes
ENSG00000160678	S100A1	chr1:153603108-153604204	+	altA	186	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,217	153603138,153603988	No	No	No	bcc_62699|Cycle_0|Type_1	30,31	153603138,153604174	psi1:0.456978967495,psi2:0.4	C1_239,C2_2	C1_284,C2_3	Yes
ENSG00000091527	CDV3	chr3:133305535-133307227	+	altA	457	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,488	133305566,133306740	No	Yes	No	bcc_33121|Cycle_10|Type_1	31,31	133305566,133307197	psi1:0.93137254902,psi2:0.936842105263	C1_190,C2_178	C1_14,C2_12	Yes
ENSG00000124593,ENSG00000214736	PRICKLE4,TOMM6	chr6:41757043-41757334	+	altA	37	Yes	-	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	31,66	41757074,41757269	No	No	No	bcc_46308|Cycle_0|Type_1	31,29	41757074,41757306	psi1:0.352,psi2:0.341708542714	C1_88,C2_68	C1_162,C2_131	Yes
ENSG00000156976	EIF4A2	chr3:186501397-186502248	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	186501428,186502218	No	No	No	bcc_31115|Cycle_0|Type_1	31,28	186501428,186502221	psi1:0.235474006116,psi2:0.217391304348	C1_77,C2_5	C1_250,C2_18	Yes
ENSG00000110422	HIPK3	chr11:33369528-33370097	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,30	33369559,33369712,33369774,33370068	No	No	No	bcc_31055|Cycle_0|Type_1	31,30	33369559,33370068	psi1:0.809523809524,psi2:0.818181818182	C1_17,C2_9	C1_4,C2_2	Yes
ENSG00000251562	MALAT1	chr11:65271646-65271827	+	IR	119	Yes	-	lincRNA	no_known_ss	181	-	No	Yes	No	bcc_15098|Cycle_0|Type_1	31,31	65271677,65271797	psi1:0.965,psi2:0.971830985915	C1_772,C2_69	C1_28,C2_2	Yes
ENSG00000168958	MFF	chr2:228207504-228220423	+	ES_MULTI	219	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,159,60,31	228207535,228211942,228212100,228217230,228217289,228220393	No	Yes	No	bcc_45905|Cycle_4|Type_1	31,31	228207535,228220393	psi1:0.95652173913,psi2:0.960784313725	C1_88,C2_49	C1_4,C2_2	Yes
ENSG00000164402	SEPT8	chr5:132099549-132099946	-	altA	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	35,31	132099584,132099916	No	No	No	bcc_30296|Cycle_0|Type_1	29,31	132099578,132099916	psi1:0.717821782178,psi2:0.75	C1_145,C2_3	C1_57,C2_1	(GC:132099916,CT:132099578);(GC:132099916,CT:132099584)
ENSG00000165156	ZHX1	chr8:124262529-124279543	-	ES	2850	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,2850,31	124262560,124265562,124268411,124279513	No	Yes	No	bcc_5131|Cycle_2|Type_1	31,31	124262560,124279513	psi1:0.982142857143,psi2:0.979472140762	C1_385,C2_334	C1_7,C2_7	Yes
ENSG00000125863	MKKS	chr20:10389423-10401205	-	ES	1402	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	28,1402,30	10389451,10393178,10394579,10401176	No	No	No	bcc_43770|Cycle_0|Type_1	28,30	10389451,10401176	psi1:0.987804878049,psi2:0.989795918367	C1_324,C2_291	C1_4,C2_3	Yes
ENSG00000047849	MAP4	chr3:48019393-48040157	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,51,30	48019423,48028873,48028923,48040128	No	No	No	bcc_6452|Cycle_0|Type_1	30,30	48019423,48040128	psi1:0.12676056338,psi2:0.111111111111	C1_27,C2_1	C1_186,C2_8	Yes
ENSG00000130821	SLC6A8	chrX:152957531-152958746	+	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,135,29	152957562,152958496,152958630,152958718	No	No	No	bcc_36093|Cycle_0|Type_1	31,29	152957562,152958718	psi1:0.990909090909,psi2:1.0	C1_109,C2_1	C1_1,C2_0	Yes
ENSG00000214941	ZSWIM7	chr17:15881198-15881387	+	IR	130	Yes	-	protein_coding	no_known_ss	189	-	No	No	No	bcc_35665|Cycle_0|Type_1	29,30	15881227,15881358	psi1:0.619047619048,psi2:0.609756097561	C1_13,C2_25	C1_8,C2_16	(CT:15881227,AC:15881358)
ENSG00000055070	SZRD1	chr1:16693777-16719755	+	ES_altA	53	Yes	Yes	protein_coding	all_splice_sites_known_(5_ss)	26,50,33	16693803,16717870,16717919,16719723	No	Yes	No	bcc_35632|Cycle_10|Type_1	26,30	16693803,16719726	psi1:0.722222222222,psi2:0.714285714286	C1_13,C2_10	C1_5,C2_4	Yes
ENSG00000126214,ENSG00000256500	KLC1,RP11-73M18.2	chr14:104143829-104145769	+	altA	24	No	Yes	protein_coding,protein_coding	2_ss_annotated_(over_3_ss):104145721,104143860	31,49	104143860,104145721	No	No	No	bcc_42942|Cycle_0|Type_1	31,25	104143860,104145745	psi1:0.889273356401,psi2:0.9	C1_257,C2_18	C1_32,C2_2	Yes
ENSG00000136504	KAT7	chr17:47882777-47888866	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,90,29	47882807,47886481,47886570,47888838	No	No	No	bcc_21370|Cycle_0|Type_1	30,29	47882807,47888838	psi1:0.5625,psi2:0.571428571429	C1_9,C2_4	C1_7,C2_3	Yes
ENSG00000196236,ENSG00000100387	XPNPEP3,RBX1	chr22:41347449-41360081	+	ES	79	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,79,31	41347480,41349559,41349637,41360051	No	No	No	bcc_50768|Cycle_0|Type_1	31,31	41347480,41360051	psi1:0.976331360947,psi2:0.973913043478	C1_165,C2_112	C1_4,C2_3	Yes
ENSG00000259399,ENSG00000101084	TGIF2-C20orf24,C20orf24	chr20:35236372-35240442	+	ES	130	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	31,130,30	35236403,35238004,35238133,35240413	No	Yes	No	bcc_50169|Cycle_1|Type_1	31,30	35236403,35240413	psi1:0.969696969697,psi2:0.972891566265	C1_64,C2_323	C1_2,C2_9	Yes
ENSG00000074071	MRPS34	chr16:1822485-1822635	-	altA	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	50,31	1822535,1822605	No	No	No	bcc_56181|Cycle_0|Type_1	29,31	1822514,1822605	psi1:0.0952380952381,psi2:0.0909090909091	C1_2,C2_1	C1_19,C2_10	Yes
ENSG00000250917	RP4-785G19.5	chr20:32868428-32868860	-	IR	376	Yes	-	sense_overlapping	no_known_ss	432	-	No	No	No	bcc_12741|Cycle_0|Type_1	28,28	32868456,32868833	psi1:0.988235294118,psi2:0.985915492958	C1_84,C2_560	C1_1,C2_8	Yes
ENSG00000107758	PPP3CB	chr10:75206301-75214200	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	75206334,75214170	No	No	No	bcc_11866|Cycle_0|Type_1	30,31	75206331,75214170	psi1:0.586466165414,psi2:0.571428571429	C1_78,C2_4	C1_55,C2_3	Yes
ENSG00000251562	MALAT1	chr11:65271646-65271827	+	altAD	118	Yes	-	lincRNA	no_known_ss	132,48	65271778,65271780	No	Yes	No	bcc_15098|Cycle_3|Type_1	31,31	65271677,65271797	psi1:0.964240102171,psi2:0.96875	C1_755,C2_62	C1_28,C2_2	(GT:65271677,AG:65271797);-
ENSG00000197408	CYP2B6	chr19:41518360-41522579	+	ES	142	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,142,29	41518390,41518579,41518720,41522551	No	Yes	No	bcc_28122|Cycle_7|Type_1	30,29	41518390,41522551	psi1:1.0,psi2:0.97027027027	C1_1,C2_718	C1_0,C2_22	Yes
ENSG00000145293	ENOPH1	chr4:83352007-83369099	+	altD	29	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	59,27	83352066,83369073	No	No	No	bcc_56031|Cycle_0|Type_1	30,27	83352037,83369073	psi1:0.763157894737,psi2:0.769230769231	C1_29,C2_10	C1_9,C2_3	Yes
ENSG00000174748	RPL15	chr3:23958636-23959368	+	altD	66	No	-	protein_coding	all_splice_sites_known_(3_ss)	94,28	23958730,23959341	No	No	No	bcc_36288|Cycle_0|Type_1	28,28	23958664,23959341	psi1:0.120879120879,psi2:0.125	C1_11,C2_7	C1_80,C2_49	Yes
ENSG00000166734	CASC4	chr15:44673143-44705564	+	ES	168	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,168,31	44673174,44695085,44695252,44705534	No	No	No	bcc_25806|Cycle_0|Type_1	31,31	44673174,44705534	psi1:0.831081081081,psi2:0.83606557377	C1_123,C2_51	C1_25,C2_10	Yes
ENSG00000106278	PTPRZ1	chr7:121651332-121652731	+	IR	1338	No	Yes	protein_coding	no_known_ss	1399	-	No	Yes	Yes	bcc_9411|Cycle_0|Type_1	31,30	121651363,121652702	psi1:0.991902834008,psi2:1.0	C1_245,C2_1	C1_2,C2_0	Yes
ENSG00000108309	RUNDC3A	chr17:42394063-42395493	+	ES	454	Yes	Yes	protein_coding	3_ss_annotated_(over_4_ss):42395464,42394093,42394853	30,454,30	42394093,42394853,42395306,42395464	No	Yes	No	bcc_13026|Cycle_1|Type_1	30,30	42394093,42395464	psi1:0.992882562278,psi2:1.0	C1_279,C2_1	C1_2,C2_0	Yes
ENSG00000169714	CNBP	chr3:128890354-128890526	-	altD	21	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	27,50	128890381,128890477	No	Yes	No	bcc_14249|Cycle_1|Type_1	27,29	128890381,128890498	psi1:0.456953642384,psi2:0.461538461538	C1_69,C2_60	C1_82,C2_70	Yes
ENSG00000105518	TMEM205	chr19:11456275-11456913	-	altAD	190	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	138,111	11456413,11456803	No	Yes	No	bcc_63141|Cycle_17|Type_1	29,30	11456304,11456884	psi1:0.976470588235,psi2:0.975	C1_83,C2_39	C1_2,C2_1	Yes
ENSG00000108309	RUNDC3A	chr17:42394063-42395493	+	altA	611	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,641	42394093,42394853	No	Yes	No	bcc_13026|Cycle_2|Type_1	30,30	42394093,42395464	psi1:0.993730407524,psi2:1.0	C1_317,C2_1	C1_2,C2_0	Yes
ENSG00000120533	ENY2	chr8:110346602-110348384	+	altD	72	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	101,28	110346703,110348357	No	No	No	bcc_54763|Cycle_0|Type_1	29,28	110346631,110348357	psi1:0.837837837838,psi2:0.840909090909	C1_31,C2_37	C1_6,C2_7	Yes
ENSG00000198947	DMD	chrX:31140020-31152247	-	ES	32	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,32,29	31140047,31144759,31144790,31152219	No	No	No	bcc_9357|Cycle_0|Type_1	27,29	31140047,31152219	psi1:0.611111111111,psi2:0.607142857143	C1_11,C2_17	C1_7,C2_11	Yes
ENSG00000129103	SUMF2	chr7:56140773-56142307	+	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,29	56140804,56141867,56141911,56142279	No	Yes	No	bcc_15514|Cycle_8|Type_1	31,29	56140804,56142279	psi1:0.958333333333,psi2:0.95652173913	C1_23,C2_66	C1_1,C2_3	Yes
ENSG00000143774	GUK1	chr1:228328035-228333241	+	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,165,30	228328064,228328825,228328989,228333212	No	No	No	bcc_16520|Cycle_0|Type_1	29,30	228328064,228333212	psi1:0.367088607595,psi2:0.363636363636	C1_29,C2_16	C1_50,C2_28	Yes
ENSG00000059728	MXD1	chr2:70131527-70131674	+	IR	86	Yes	-	protein_coding	no_known_ss	147	-	No	No	No	bcc_36913|Cycle_1|Type_1	30,31	70131557,70131644	psi1:0.872727272727,psi2:0.875	C1_48,C2_21	C1_7,C2_3	Yes
ENSG00000070614	NDST1	chr5:149931386-149932805	+	altD	39	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):149931417,149932775	70,31	149931456,149932775	No	No	No	bcc_9653|Cycle_0|Type_1	31,31	149931417,149932775	psi1:0.0512820512821,psi2:0.0526315789474	C1_2,C2_3	C1_37,C2_54	Yes
ENSG00000164615	CAMLG	chr5:134074452-134086478	+	ES_MULTI	527	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,461,66,30	134074482,134076753,134077213,134079677,134079742,134086449	No	Yes	No	bcc_32091|Cycle_2|Type_1	30,30	134074482,134086449	psi1:0.958174904943,psi2:0.95652173913	C1_252,C2_44	C1_11,C2_2	Yes
ENSG00000101940	WDR13	chrX:48456394-48457167	+	altA	34	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,63	48456425,48457105	No	No	No	bcc_55868|Cycle_0|Type_1	31,29	48456425,48457139	psi1:0.894736842105,psi2:0.896551724138	C1_17,C2_26	C1_2,C2_3	Yes
ENSG00000102081	FMR1	chrX:147024815-147026492	+	altA	75	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,104	147024846,147026389	No	Yes	No	bcc_34664|Cycle_1|Type_1	31,29	147024846,147026464	psi1:0.872340425532,psi2:0.875	C1_41,C2_7	C1_6,C2_1	Yes
ENSG00000133226	SRRM1	chr1:24987263-24987833	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	27,33	24987290,24987801	No	No	No	bcc_16712|Cycle_0|Type_1	27,30	24987290,24987804	psi1:0.689655172414,psi2:0.6875	C1_20,C2_11	C1_9,C2_5	Yes
ENSG00000078018	MAP2	chr2:210545521-210565029	+	ES_MULTI	4053	No	Yes	protein_coding	7_ss_annotated_(over_8_ss):210561472,210565001,210561266,210545551,210557361,210561074,210561775	30,3714,207,132,29	210545551,210557361,210561074,210561266,210561472,210561644,210561775,210565001	No	Yes	No	bcc_25521|Cycle_1|Type_1	30,29	210545551,210565001	psi1:0.997204472843,psi2:1.0	C1_2497,C2_4	C1_7,C2_0	Yes
ENSG00000104529	EEF1D	chr8:144663467-144668929	-	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,72,31	144663498,144668389,144668460,144668899	No	No	No	bcc_53759|Cycle_0|Type_1	31,31	144663498,144668899	psi1:0.958333333333,psi2:0.956989247312	C1_23,C2_178	C1_1,C2_8	Yes
ENSG00000078018	MAP2	chr2:210545520-210565029	+	ES_MULTI	4065	No	Yes	protein_coding	7_ss_annotated_(over_8_ss):210561472,210557349,210565001,210561074,210545551,210561266,210561775	31,3726,207,132,29	210545551,210557349,210561074,210561266,210561472,210561644,210561775,210565001	No	Yes	No	bcc_25521|Cycle_9|Type_1	31,29	210545551,210565001	psi1:0.997220015886,psi2:1.0	C1_2511,C2_4	C1_7,C2_0	Yes
ENSG00000078018	MAP2	chr2:210545521-210565029	+	ES_MULTI	4056	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	30,3714,207,135,29	210545551,210557361,210561074,210561266,210561472,210561641,210561775,210565001	No	Yes	No	bcc_25521|Cycle_0|Type_1	30,29	210545551,210565001	psi1:0.997240835633,psi2:1.0	C1_2530,C2_4	C1_7,C2_0	Yes
ENSG00000078018	MAP2	chr2:210545520-210565029	+	ES_MULTI	4068	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,3726,207,135,29	210545551,210557349,210561074,210561266,210561472,210561641,210561775,210565001	No	Yes	No	bcc_25521|Cycle_8|Type_1	31,29	210545551,210565001	psi1:0.997255978048,psi2:1.0	C1_2544,C2_4	C1_7,C2_0	Yes
ENSG00000115414	FN1	chr2:216236996-216238075	-	altA	75	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	102,31	216237098,216238045	No	Yes	No	bcc_27754|Cycle_0|Type_1	27,31	216237023,216238045	psi1:0.731707317073,psi2:0.728395061728	C1_30,C2_413	C1_11,C2_154	Yes
ENSG00000137806	NDUFAF1	chr15:41679749-41680676	-	altA	13	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):41680646,41679791	42,31	41679791,41680646	No	No	No	bcc_51090|Cycle_0|Type_1	29,31	41679778,41680646	psi1:0.923076923077,psi2:0.922077922078	C1_84,C2_71	C1_7,C2_6	Yes
ENSG00000166971	AKTIP	chr16:53526400-53526632	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,28	53526434,53526605	No	No	No	bcc_39571|Cycle_0|Type_1	31,28	53526431,53526605	psi1:0.53125,psi2:0.529411764706	C1_17,C2_9	C1_15,C2_8	Yes
ENSG00000171204	TMEM126B	chr11:85339702-85342761	+	ES	172	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,172,31	85339732,85342189,85342360,85342731	No	No	No	bcc_24938|Cycle_0|Type_1	30,31	85339732,85342731	psi1:0.878571428571,psi2:0.88	C1_123,C2_22	C1_17,C2_3	Yes
ENSG00000117335	CD46	chr1:207940509-207943694	+	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,29	207940540,207941124,207941168,207943666	No	Yes	No	bcc_44291|Cycle_1|Type_1	31,29	207940540,207943666	psi1:0.909090909091,psi2:0.908163265306	C1_10,C2_89	C1_1,C2_9	Yes
ENSG00000123843	C4BPB	chr1:207262903-207263685	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	207262934,207263653	No	No	No	bcc_9857|Cycle_0|Type_1	31,30	207262934,207263656	psi1:0,psi2:0.696202531646	C1_0,C2_165	C1_0,C2_72	Yes
ENSG00000123843	C4BPB	chr1:207262677-207262857	-	IR	120	No	-	protein_coding	no_known_ss	180	-	No	Yes	No	bcc_9856|Cycle_2|Type_1	29,31	207262706,207262827	psi1:0,psi2:0.928774928775	C1_0,C2_326	C1_0,C2_25	(AG:207262827,GT:207262706)
ENSG00000131089	ARHGEF9	chrX:62944560-62974225	-	altD	11	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,42	62944591,62974184	No	Yes	No	bcc_9777|Cycle_1|Type_1	31,31	62944591,62974195	psi1:0.416666666667,psi2:0	C1_10,C2_0	C1_14,C2_0	Yes
ENSG00000182667	NTM	chr11:132184566-132204969	+	ES_MULTI	69	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,36,33,30	132184597,132187549,132187584,132200047,132200079,132204940	No	No	No	bcc_9719|Cycle_0|Type_1	31,30	132184597,132204940	psi1:0.769230769231,psi2:0	C1_20,C2_0	C1_6,C2_0	Yes
ENSG00000106278	PTPRZ1	chr7:121695111-121699837	+	ES	143	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,143,31	121695141,121698854,121698996,121699807	No	No	No	bcc_9404|Cycle_0|Type_1	30,31	121695141,121699807	psi1:0.978378378378,psi2:0	C1_181,C2_0	C1_4,C2_0	Yes
ENSG00000109339	MAPK10	chr4:87080591-87115518	-	altD	27	No	-	protein_coding	all_splice_sites_known_(3_ss)	29,57	87080620,87115462	No	No	No	bcc_9341|Cycle_0|Type_1	29,30	87080620,87115489	psi1:0.489130434783,psi2:0	C1_45,C2_0	C1_47,C2_0	Yes
ENSG00000164985	PSIP1	chr9:15471278-15472658	-	altA	27	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):15471309,15472630	58,29	15471336,15472630	No	Yes	No	bcc_9325|Cycle_37|Type_1	31,29	15471309,15472630	psi1:0.168316831683,psi2:0	C1_17,C2_0	C1_84,C2_0	(AC:15472630,CA:15471336);(AC:15472630,CT:15471309)
ENSG00000153707	PTPRD	chr9:8521517-8524955	-	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,12,31	8521546,8523513,8523524,8524925	No	No	No	bcc_9322|Cycle_0|Type_1	29,31	8521546,8524925	psi1:0.538461538462,psi2:0	C1_7,C2_0	C1_6,C2_0	Yes
ENSG00000153707	PTPRD	chr9:8485293-8504291	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):8485324,8504261	34,31	8485327,8504261	No	No	No	bcc_9319|Cycle_0|Type_1	31,31	8485324,8504261	psi1:0.391304347826,psi2:0	C1_9,C2_0	C1_14,C2_0	Yes
ENSG00000153707	PTPRD	chr9:8436658-8449753	-	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,42,29	8436689,8437198,8437239,8449725	No	No	No	bcc_9316|Cycle_0|Type_1	31,29	8436689,8449725	psi1:0.552631578947,psi2:0	C1_21,C2_0	C1_17,C2_0	Yes
ENSG00000229314	ORM1	chr9:117087084-117087145	+	deletion	3	No	Yes	protein_coding	no_known_ss	61	117087084	No	No	No	bcc_9122|Cycle_0|Type_1	28,30	117087112,117087116	psi1:0,psi2:0.955223880597	C1_0,C2_64	C1_0,C2_3	-
ENSG00000116675	DNAJC6	chr1:65845176-65849904	+	ES	55	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):65849876,65845207	31,55,29	65845207,65847504,65847558,65849876	No	No	No	bcc_8988|Cycle_0|Type_1	31,29	65845207,65849876	psi1:0.162790697674,psi2:0	C1_14,C2_0	C1_72,C2_0	Yes
ENSG00000139910	NOVA1	chr14:26918138-26949213	-	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,72,31	26918169,26941526,26941597,26949183	No	No	No	bcc_8978|Cycle_0|Type_1	31,31	26918169,26949183	psi1:0.855263157895,psi2:0	C1_65,C2_0	C1_11,C2_0	Yes
ENSG00000084731	KIF3C	chr2:26152898-26174688	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,31	26152932,26174658	No	No	No	bcc_8977|Cycle_1|Type_1	31,31	26152929,26174658	psi1:0.826446280992,psi2:0	C1_100,C2_0	C1_21,C2_0	Yes
ENSG00000132718	SYT11	chr1:155850380-155851019	+	altD	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):155850989,155850414	34,31	155850414,155850989	No	Yes	No	bcc_8552|Cycle_2|Type_1	31,31	155850411,155850989	psi1:0.854166666667,psi2:0	C1_164,C2_0	C1_28,C2_0	(GT:155850411,AG:155850989);(GC:155850414,AG:155850989)
ENSG00000171914	TLN2	chr15:63032938-63042629	+	ES	94	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,94,29	63032968,63040550,63040643,63042601	No	No	No	bcc_8519|Cycle_0|Type_1	30,29	63032968,63042601	psi1:0.926829268293,psi2:0	C1_38,C2_0	C1_3,C2_0	Yes
ENSG00000175003	SLC22A1	chr6:160575911-160579577	+	ES	100	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,100,30	160575942,160577007,160577106,160579548	No	No	No	bcc_8286|Cycle_0|Type_1	31,30	160575942,160579548	psi1:0,psi2:0.904008438819	C1_0,C2_857	C1_0,C2_91	Yes
ENSG00000148053	NTRK2	chr9:87283669-87285320	+	ES	89	Yes	-	protein_coding	3_ss_annotated_(over_4_ss):87285292,87283700,87284338	31,89,29	87283700,87284250,87284338,87285292	No	No	No	bcc_8277|Cycle_0|Type_1	31,29	87283700,87285292	psi1:0.947368421053,psi2:0	C1_18,C2_0	C1_1,C2_0	Yes
ENSG00000031081	ARHGAP31	chr3:119128412-119128542	+	IR	71	Yes	Yes	protein_coding	no_known_ss	130	-	No	No	No	bcc_80051|Cycle_0|Type_1	28,31	119128440,119128512	psi1:0.8,psi2:0	C1_8,C2_0	C1_2,C2_0	(GC:119128440,AG:119128512)
ENSG00000165238	WNK2	chr9:96052298-96054620	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	96052329,96054590	No	No	No	bcc_79386|Cycle_0|Type_1	31,28	96052329,96054593	psi1:0.625,psi2:0	C1_5,C2_0	C1_3,C2_0	Yes
ENSG00000067445	TRO	chrX:54947282-54948679	+	altA	15	No	-	protein_coding	all_splice_sites_known_(3_ss)	29,44	54947311,54948636	No	No	No	bcc_79078|Cycle_0|Type_1	29,29	54947311,54948651	psi1:0.2,psi2:0	C1_3,C2_0	C1_12,C2_0	Yes
ENSG00000169914	OTUD3	chr1:20230837-20231413	+	altD	24	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):20231384,20230891	54,30	20230891,20231384	No	No	No	bcc_78769|Cycle_0|Type_1	30,30	20230867,20231384	psi1:0.5,psi2:0	C1_3,C2_0	C1_3,C2_0	Yes
ENSG00000141391	SLMO1	chr18:12429401-12431177	+	altD	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	34,29	12429435,12431149	No	No	No	bcc_78599|Cycle_0|Type_1	31,29	12429432,12431149	psi1:0.5,psi2:0	C1_4,C2_0	C1_4,C2_0	Yes
ENSG00000126561	STAT5A	chr17:40456633-40457656	+	altD	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):40457628,40456670	37,29	40456670,40457628	No	No	No	bcc_78126|Cycle_0|Type_1	31,29	40456664,40457628	psi1:0.8,psi2:0	C1_8,C2_0	C1_2,C2_0	Yes
ENSG00000163581	SLC2A2	chr3:170725022-170732288	-	ES	125	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,125,31	170725052,170727747,170727871,170732258	No	Yes	No	bcc_7771|Cycle_2|Type_1	30,31	170725052,170732258	psi1:0,psi2:0.985221674877	C1_0,C2_200	C1_0,C2_3	Yes
ENSG00000163581	SLC2A2	chr3:170727842-170736350	-	ES	263	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,263,31	170727871,170732258,170732520,170736320	No	Yes	No	bcc_7771|Cycle_0|Type_1	29,31	170727871,170736320	psi1:0,psi2:0.987046632124	C1_0,C2_381	C1_0,C2_5	(GC:170736320,CT:170727871);(GC:170736320,CT:170732520);(AC:170732258,CT:170727871)
ENSG00000246695	RASSF8-AS1	chr12:26109663-26110982	-	altA	3	No	-	antisense	all_splice_sites_known_(3_ss)	34,31	26109697,26110952	No	No	No	bcc_77560|Cycle_0|Type_1	31,31	26109694,26110952	psi1:0.25,psi2:0	C1_2,C2_0	C1_6,C2_0	Yes
ENSG00000184985	SORCS2	chr4:7736070-7738824	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	7736101,7738793	No	No	No	bcc_76020|Cycle_0|Type_1	31,29	7736101,7738796	psi1:0.4375,psi2:0	C1_7,C2_0	C1_9,C2_0	(GC:7736101,AG:7738793);(GC:7736101,AG:7738796)
ENSG00000134775	FHOD3	chr18:34182701-34191945	+	ES	21	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):34191915,34182731	30,21,31	34182731,34188691,34188711,34191915	No	No	No	bcc_75369|Cycle_0|Type_1	30,31	34182731,34191915	psi1:0.545454545455,psi2:0	C1_6,C2_0	C1_5,C2_0	Yes
ENSG00000160469	BRSK1	chr19:55795043-55795164	-	IR	60	No	-	protein_coding	no_known_ss	121	-	No	No	No	bcc_75295|Cycle_0|Type_1	30,31	55795073,55795134	psi1:0.846153846154,psi2:0	C1_11,C2_0	C1_2,C2_0	(GG:55795134,CA:55795073)
ENSG00000023171	GRAMD1B	chr11:123485512-123489431	+	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,12,31	123485543,123489053,123489064,123489401	No	No	No	bcc_75276|Cycle_0|Type_1	31,31	123485543,123489401	psi1:0.538461538462,psi2:0	C1_7,C2_0	C1_6,C2_0	Yes
ENSG00000164112	TMEM155	chr4:122683920-122684947	-	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	33,29	122683953,122684919	No	No	No	bcc_75090|Cycle_0|Type_1	30,29	122683950,122684919	psi1:0.625,psi2:0	C1_5,C2_0	C1_3,C2_0	Yes
ENSG00000169760	NLGN1	chr3:173993260-173996678	+	altD	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	57,28	173993317,173996651	No	No	No	bcc_74461|Cycle_0|Type_1	30,28	173993290,173996651	psi1:0.714285714286,psi2:0	C1_5,C2_0	C1_2,C2_0	Yes
ENSG00000163531	NFASC	chr1:204976063-204976126	-	deletion	3	No	-	protein_coding	no_known_ss	63	204976063	No	No	No	bcc_73597|Cycle_0|Type_1	29,31	204976092,204976096	psi1:0.6,psi2:0	C1_6,C2_0	C1_4,C2_0	-
ENSG00000118194	TNNT2	chr1:201331127-201332454	-	unclassified	3	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	23,9,31	201331150,201331514,201331522,201332424	No	No	No	bcc_73252|Cycle_0|Type_1	23,6,31	201331150,201331514,201331519,201332424	psi1:0.8,psi2:0	C1_12,C2_0	C1_3,C2_0	Yes
ENSG00000204099	NEU4	chr2:242750338-242755708	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	242750369,242755676	No	No	No	bcc_73080|Cycle_0|Type_1	31,30	242750369,242755679	psi1:0,psi2:0.272727272727	C1_0,C2_6	C1_0,C2_16	Yes
ENSG00000181790	BAI1	chr8:143625039-143625609	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):143625069,143625581	30,32	143625069,143625578	No	No	No	bcc_73035|Cycle_0|Type_1	30,29	143625069,143625581	psi1:0.25,psi2:0	C1_3,C2_0	C1_9,C2_0	Yes
ENSG00000073584	SMARCE1	chr17:38782121-38782176	+	deletion	3	No	-	protein_coding	no_known_ss	55	38782121	No	No	No	bcc_72108|Cycle_0|Type_1	29,23	38782150,38782154	psi1:0.428571428571,psi2:0	C1_3,C2_0	C1_4,C2_0	-
ENSG00000085382	HACE1	chr6:105244869-105291128	-	ES_MULTI	215	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,83,132,31	105244900,105259186,105259268,105280917,105281048,105291098	No	No	No	bcc_71872|Cycle_0|Type_1	31,31	105244900,105291098	psi1:0.846153846154,psi2:0	C1_22,C2_0	C1_4,C2_0	Yes
ENSG00000163531	NFASC	chr1:204840167-204913382	+	ES	109	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,109,29	204840198,204889760,204889868,204913354	No	No	No	bcc_71397|Cycle_0|Type_1	31,29	204840198,204913354	psi1:0.896551724138,psi2:0	C1_26,C2_0	C1_3,C2_0	Yes
ENSG00000198753	PLXNB3	chrX:153040829-153041371	+	ES	67	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,67,30	153040858,153041049,153041115,153041342	No	No	No	bcc_70451|Cycle_0|Type_1	29,30	153040858,153041342	psi1:0.789473684211,psi2:0	C1_15,C2_0	C1_4,C2_0	Yes
ENSG00000167645	YIF1B	chr19:38800253-38806393	-	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,37	38800283,38806357	No	No	No	bcc_70373|Cycle_0|Type_1	30,31	38800283,38806363	psi1:0,psi2:0.5	C1_0,C2_2	C1_0,C2_2	Yes
ENSG00000166925	TSC22D4	chr7:100065234-100065347	+	IR	54	No	Yes	protein_coding	no_known_ss	113	-	No	No	No	bcc_70370|Cycle_0|Type_1	29,30	100065263,100065318	psi1:0.8,psi2:0	C1_8,C2_0	C1_2,C2_0	(CT:100065263,AC:100065318)
ENSG00000088538	DOCK3	chr3:51398032-51399381	+	altA	63	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):51399290,51398063	31,92	51398063,51399290	No	No	No	bcc_70261|Cycle_0|Type_1	31,29	51398063,51399353	psi1:0.9,psi2:0	C1_27,C2_0	C1_3,C2_0	Yes
ENSG00000088538	DOCK3	chr3:51400074-51411946	+	altA	18	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):51400105,51411900	31,47	51400105,51411900	No	No	No	bcc_70260|Cycle_0|Type_1	31,29	51400105,51411918	psi1:0.272727272727,psi2:0	C1_3,C2_0	C1_8,C2_0	Yes
ENSG00000142185	TRPM2	chr21:45839415-45839478	-	deletion	3	No	-	protein_coding	no_known_ss	63	45839415	No	No	No	bcc_69223|Cycle_0|Type_1	29,31	45839444,45839448	psi1:0.666666666667,psi2:0	C1_8,C2_0	C1_4,C2_0	-
ENSG00000184381	PLA2G6	chr22:38525553-38536045	-	ES_altD	294	No	Yes	protein_coding	6_ss_annotated_(over_8_ss):38525569,38528838,38531091,38535989,38529020,38530995	16,183,97,57	38525569,38528838,38529020,38530995,38531091,38535989	No	No	No	bcc_69058|Cycle_0|Type_1	16,12,31	38525569,38528838,38528849,38536015	psi1:0.916666666667,psi2:0	C1_22,C2_0	C1_2,C2_0	(AC:38528838,CT:38525569);(GA:38536015,GT:38528849);(AC:38530995,CT:38529020);(AC:38535989,CT:38531091)
ENSG00000011332	DPF1	chr19:38709268-38709601	-	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):38709571,38709302	34,31	38709302,38709571	No	No	No	bcc_68968|Cycle_0|Type_1	28,31	38709296,38709571	psi1:0.942307692308,psi2:0	C1_49,C2_0	C1_3,C2_0	Yes
ENSG00000175573	C11orf68	chr11:65685657-65686411	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	65685689,65686381	No	No	No	bcc_68888|Cycle_0|Type_1	29,31	65685686,65686381	psi1:0.181818181818,psi2:0	C1_2,C2_0	C1_9,C2_0	Yes
ENSG00000213214	ARHGEF35	chr7:143884825-143983389	-	altAD	6	No	Yes	protein_coding	no_known_ss	26,42	143884851,143983348	No	No	No	bcc_68852|Cycle_0|Type_1	37,25	143884862,143983365	psi1:0,psi2:0.666666666667	C1_0,C2_4	C1_0,C2_2	(GC:143983365,CT:143884862);(TG:143983348,CT:143884851)
ENSG00000105642	KCNN1	chr19:18100597-18104320	+	altD	25	Yes	Yes	protein_coding	4_ss_annotated_(over_5_ss):18104299,18103871,18100652,18103863	55,9,22	18100652,18103863,18103871,18104299	No	No	No	bcc_68736|Cycle_0|Type_1	30,9,22	18100627,18103863,18103871,18104299	psi1:0.71875,psi2:0	C1_23,C2_0	C1_9,C2_0	Yes
ENSG00000137872	SEMA6D	chr15:48058348-48058843	+	altA	39	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,70	48058379,48058774	No	No	No	bcc_68614|Cycle_0|Type_1	31,31	48058379,48058813	psi1:0.692307692308,psi2:0	C1_9,C2_0	C1_4,C2_0	Yes
ENSG00000112339	HBS1L	chr6:135352083-135352147	-	deletion	3	No	-	protein_coding	no_known_ss	64	135352083	No	No	No	bcc_67962|Cycle_0|Type_1	30,31	135352113,135352117	psi1:0.5,psi2:0	C1_2,C2_0	C1_2,C2_0	-
ENSG00000164181	ELOVL7	chr5:60063699-60067806	-	altD	46	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,77	60063730,60067730	No	No	No	bcc_67848|Cycle_0|Type_1	31,31	60063730,60067776	psi1:0.818181818182,psi2:0	C1_9,C2_0	C1_2,C2_0	(GC:60067730,CT:60063730);(AC:60067776,CT:60063730)
ENSG00000164181	ELOVL7	chr5:60083228-60139279	-	ES	51	No	-	protein_coding	all_splice_sites_known_(4_ss)	30,51,31	60083258,60095007,60095057,60139249	No	No	No	bcc_67847|Cycle_0|Type_1	30,31	60083258,60139249	psi1:0.777777777778,psi2:0	C1_7,C2_0	C1_2,C2_0	Yes
ENSG00000198315	ZKSCAN8	chr6:28116573-28117291	+	altD	14	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	43,31	28116616,28117261	No	No	No	bcc_67663|Cycle_0|Type_1	29,31	28116602,28117261	psi1:0.5,psi2:0	C1_3,C2_0	C1_3,C2_0	Yes
ENSG00000170390	DCLK2	chr4:151176376-151176475	+	deletion	41	Yes	-	protein_coding	no_known_ss	99	151176376	No	No	No	bcc_67361|Cycle_0|Type_1	27,31	151176403,151176445	psi1:0.7,psi2:0	C1_7,C2_0	C1_3,C2_0	-
ENSG00000183401	CCDC159	chr19:11457272-11460357	+	altD	7	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	38,28	11457310,11460330	No	No	No	bcc_67167|Cycle_0|Type_1	31,28	11457303,11460330	psi1:0.333333333333,psi2:0.333333333333	C1_1,C2_1	C1_2,C2_2	Yes
ENSG00000088538	DOCK3	chr3:50879116-50971441	+	ES	56	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,56,30	50879146,50927457,50927512,50971412	No	No	No	bcc_67150|Cycle_0|Type_1	30,30	50879146,50971412	psi1:0.833333333333,psi2:0	C1_15,C2_0	C1_3,C2_0	Yes
ENSG00000102547	CAB39L	chr13:49975375-49975560	-	IR	124	Yes	-	protein_coding	no_known_ss	185	-	No	No	No	bcc_66566|Cycle_0|Type_1	31,30	49975406,49975531	psi1:0.944444444444,psi2:0	C1_34,C2_0	C1_2,C2_0	Yes
ENSG00000150471	LPHN3	chr4:62679576-62758417	+	altA	15	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):62758374,62679607	31,44	62679607,62758374	No	No	No	bcc_66440|Cycle_0|Type_1	31,29	62679607,62758389	psi1:0.714285714286,psi2:0	C1_5,C2_0	C1_2,C2_0	Yes
ENSG00000149970	CNKSR2	chrX:21550154-21581385	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,90,30	21550185,21579589,21579678,21581356	No	No	No	bcc_6639|Cycle_0|Type_1	31,30	21550185,21581356	psi1:0.894117647059,psi2:0	C1_76,C2_0	C1_9,C2_0	Yes
ENSG00000205702	CYP2D7P	chr22:42537318-42537665	-	altD	91	Yes	Yes	polymorphic_pseudogene	all_splice_sites_known_(3_ss)	31,122	42537349,42537544	No	Yes	Yes	bcc_66314|Cycle_2|Type_1	31,31	42537349,42537635	psi1:0,psi2:0.916666666667	C1_0,C2_88	C1_0,C2_8	Yes
ENSG00000187672	ERC2	chr3:55984559-56026115	-	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,12,31	55984588,56020005,56020016,56026085	No	No	No	bcc_66238|Cycle_0|Type_1	29,31	55984588,56026085	psi1:0.666666666667,psi2:0	C1_12,C2_0	C1_6,C2_0	Yes
ENSG00000033122	LRRC7	chr1:70555474-70573480	+	altA	17	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):70573435,70555502	28,46	70555502,70573435	No	No	No	bcc_66201|Cycle_1|Type_1	28,29	70555502,70573452	psi1:0.666666666667,psi2:0	C1_4,C2_0	C1_2,C2_0	Yes
ENSG00000146592	CREB5	chr7:28857765-28858763	+	ES	29	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,29,31	28857796,28858378,28858406,28858733	No	No	No	bcc_66130|Cycle_1|Type_1	31,31	28857796,28858733	psi1:0.413793103448,psi2:0	C1_12,C2_0	C1_17,C2_0	Yes
ENSG00000166839	ANKDD1A	chr15:65243699-65243760	-	deletion	3	No	-	protein_coding	no_known_ss	61	65243699	No	No	No	bcc_66114|Cycle_0|Type_1	27,31	65243726,65243730	psi1:0.333333333333,psi2:0	C1_2,C2_0	C1_4,C2_0	-
ENSG00000187017	ESPN	chr1:6511400-6517274	+	ES_MULTI	410	Yes	Yes	protein_coding	5_ss_annotated_(over_6_ss):6511808,6512156,6511663,6511893,6517244	30,146,264,31	6511430,6511663,6511808,6511893,6512156,6517244	No	No	No	bcc_65915|Cycle_0|Type_1	30,31	6511430,6517244	psi1:0,psi2:0.942857142857	C1_0,C2_66	C1_0,C2_4	Yes
ENSG00000116584	ARHGEF2	chr1:155934890-155935124	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	155934922,155935094	No	No	No	bcc_65900|Cycle_0|Type_1	29,31	155934919,155935094	psi1:0.647058823529,psi2:0	C1_11,C2_0	C1_6,C2_0	Yes
ENSG00000124772	CPNE5	chr6:36759845-36762397	-	ES	51	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):36759873,36762367	28,51,31	36759873,36760173,36760223,36762367	No	No	No	bcc_65639|Cycle_0|Type_1	28,31	36759873,36762367	psi1:0.8,psi2:0	C1_12,C2_0	C1_3,C2_0	Yes
ENSG00000185737	NRG3	chr10:84498375-84711231	+	unclassified	3	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,27,7	84498406,84625167,84625193,84711225	No	No	No	bcc_65522|Cycle_0|Type_1	31,24,7	84498406,84625170,84625193,84711225	psi1:0.705882352941,psi2:0	C1_12,C2_0	C1_5,C2_0	Yes
ENSG00000171735	CAMTA1	chr1:7797599-7798385	+	altA	339	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):7798019,7797630	31,367	7797630,7798019	No	No	No	bcc_65329|Cycle_0|Type_1	31,28	7797630,7798358	psi1:0.886363636364,psi2:0	C1_39,C2_0	C1_5,C2_0	Yes
ENSG00000134343	ANO3	chr11:26683473-26683533	-	deletion	3	No	-	protein_coding	no_known_ss	60	26683473	No	No	No	bcc_65286|Cycle_0|Type_1	26,31	26683499,26683503	psi1:0.25,psi2:0	C1_4,C2_0	C1_12,C2_0	-
ENSG00000187416	LHFPL3	chr7:104377327-104546664	+	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,48,31	104377358,104485829,104485876,104546634	No	No	No	bcc_65165|Cycle_0|Type_1	31,31	104377358,104546634	psi1:0.481481481481,psi2:0	C1_13,C2_0	C1_14,C2_0	Yes
ENSG00000166091	CMTM5	chr14:23846556-23848538	+	ES_MULTI	246	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,153,93,31	23846586,23847558,23847710,23848240,23848332,23848508	No	No	No	bcc_65033|Cycle_1|Type_1	30,31	23846586,23848508	psi1:0.979166666667,psi2:0	C1_94,C2_0	C1_2,C2_0	Yes
ENSG00000119866	BCL11A	chr2:60679166-60679231	-	deletion	3	No	-	protein_coding	no_known_ss	65	60679166	No	No	No	bcc_65015|Cycle_0|Type_1	31,31	60679197,60679201	psi1:0.571428571429,psi2:0	C1_4,C2_0	C1_3,C2_0	-
-	unknown_gene	chr4:86925953-86926014	0	deletion	3	No	-	-	no_ss	61	86925953	No	No	No	bcc_64690|Cycle_0|Type_1	27,31	86925980,86925984	psi1:0.625,psi2:0	C1_5,C2_0	C1_3,C2_0	-
ENSG00000163755	HPS3	chr3:148858254-148858885	+	altA	53	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):148858804,148858285	31,82	148858285,148858804	No	No	No	bcc_64672|Cycle_0|Type_1	31,29	148858285,148858857	psi1:0.9375,psi2:0	C1_15,C2_0	C1_1,C2_0	Yes
ENSG00000272369	RP11-446N19.1	chr12:46848893-47046202	+	ES	110	Yes	-	lincRNA	2_ss_annotated_(over_4_ss):46848924,47046173	31,110,30	46848924,46863936,46864045,47046173	No	Yes	No	bcc_64641|Cycle_0|Type_1	31,30	46848924,47046173	psi1:0,psi2:0.666666666667	C1_0,C2_16	C1_0,C2_8	Yes
ENSG00000106665	CLIP2	chr7:73778614-73790246	+	ES	105	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,105,30	73778645,73787262,73787366,73790217	No	No	No	bcc_64285|Cycle_0|Type_1	31,30	73778645,73790217	psi1:0.897959183673,psi2:0	C1_44,C2_0	C1_5,C2_0	Yes
ENSG00000263731	RP11-498C9.15	chr17:79836761-79836826	-	deletion	6	No	-	lincRNA	no_known_ss	65	79836761	No	No	No	bcc_64074|Cycle_0|Type_1	28,31	79836789,79836796	psi1:0.4,psi2:0	C1_2,C2_0	C1_3,C2_0	-
ENSG00000182327	GLTPD2	chr17:4692556-4693084	+	ES	167	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,167,31	4692585,4692806,4692972,4693054	No	Yes	Yes	bcc_63995|Cycle_6|Type_1	29,31	4692585,4693054	psi1:0,psi2:0.9375	C1_0,C2_45	C1_0,C2_3	Yes
ENSG00000167614	TTYH1	chr19:54946833-54947298	+	ES_altA	49	Yes	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,46,31	54946864,54947008,54947053,54947268	No	Yes	No	bcc_63921|Cycle_3|Type_1	31,28	54946864,54947271	psi1:0.68,psi2:0	C1_34,C2_0	C1_16,C2_0	Yes
ENSG00000167614	TTYH1	chr19:54946833-54947298	+	ES	46	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,46,28	54946864,54947008,54947053,54947271	No	Yes	No	bcc_63921|Cycle_2|Type_1	31,28	54946864,54947271	psi1:0.807228915663,psi2:0	C1_67,C2_0	C1_16,C2_0	Yes
ENSG00000167614	TTYH1	chr19:54947022-54947298	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	54947053,54947268	No	Yes	No	bcc_63921|Cycle_0|Type_1	31,28	54947053,54947271	psi1:0.173333333333,psi2:0	C1_13,C2_0	C1_62,C2_0	Yes
ENSG00000100095	SEZ6L	chr22:26743848-26761368	+	ES	192	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,192,31	26743879,26747018,26747209,26761338	No	No	No	bcc_63886|Cycle_0|Type_1	31,31	26743879,26761338	psi1:0.885714285714,psi2:0	C1_31,C2_0	C1_4,C2_0	Yes
ENSG00000009950	MLXIPL	chr7:73021320-73021691	-	altD	195	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,226	73021348,73021466	No	No	No	bcc_63522|Cycle_0|Type_1	28,31	73021348,73021661	psi1:0,psi2:0.769230769231	C1_0,C2_20	C1_0,C2_6	Yes
ENSG00000101489	CELF4	chr18:34855172-34901826	-	altD	30	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,61	34855203,34901766	No	No	No	bcc_63440|Cycle_0|Type_1	31,31	34855203,34901796	psi1:0.5,psi2:0	C1_3,C2_0	C1_3,C2_0	Yes
ENSG00000186566	GPATCH8	chr17:42513883-42541870	-	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,45,31	42513913,42516039,42516083,42541840	No	No	No	bcc_63356|Cycle_0|Type_1	30,31	42513913,42541840	psi1:0.285714285714,psi2:0	C1_4,C2_0	C1_10,C2_0	Yes
ENSG00000078699	CBFA2T2	chr20:32224486-32228178	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,32	32224514,32228147	No	No	No	bcc_63343|Cycle_0|Type_1	28,29	32224514,32228150	psi1:0.75,psi2:0	C1_6,C2_0	C1_2,C2_0	Yes
ENSG00000239779	WBP1	chr2:74685767-74686632	+	altA	40	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,68	74685798,74686565	No	Yes	No	bcc_63203|Cycle_9|Type_1	31,28	74685798,74686605	psi1:0.935483870968,psi2:0	C1_29,C2_0	C1_2,C2_0	Yes
ENSG00000115977	AAK1	chr2:69736562-69741633	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):69736592,69741603	33,31	69736595,69741603	No	No	No	bcc_6312|Cycle_0|Type_1	30,31	69736592,69741603	psi1:0.777777777778,psi2:0	C1_7,C2_0	C1_2,C2_0	Yes
ENSG00000115718	PROC	chr2:128179020-128180878	+	ES	138	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	5,25,138,29	128179025,128180493,128180517,128180610,128180747,128180850	No	No	No	bcc_63110|Cycle_0|Type_1	5,25,29	128179025,128180493,128180517,128180850	psi1:0,psi2:0.960784313725	C1_0,C2_49	C1_0,C2_2	Yes
ENSG00000187391	MAGI2	chr7:77814956-77824227	-	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,37	77814987,77824191	No	No	No	bcc_62676|Cycle_0|Type_1	31,31	77814987,77824197	psi1:0.4375,psi2:0	C1_7,C2_0	C1_9,C2_0	Yes
ENSG00000150995	ITPR1	chr3:4716875-4718328	+	altD	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	57,31	4716932,4718298	No	No	No	bcc_62588|Cycle_0|Type_1	30,31	4716905,4718298	psi1:0.545454545455,psi2:0	C1_18,C2_0	C1_15,C2_0	Yes
ENSG00000179152	TCAIM	chr3:44402979-44409053	+	altA	76	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,106	44403010,44408948	No	No	No	bcc_62543|Cycle_0|Type_1	31,30	44403010,44409024	psi1:0.625,psi2:0.625	C1_5,C2_5	C1_3,C2_3	Yes
ENSG00000121753	BAI2	chr1:32198713-32201210	-	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,99,30	32198744,32200784,32200882,32201181	No	No	No	bcc_62419|Cycle_0|Type_1	31,30	32198744,32201181	psi1:0.451612903226,psi2:0	C1_14,C2_0	C1_17,C2_0	Yes
ENSG00000121753	BAI2	chr1:32193849-32194229	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	32193881,32194199	No	No	No	bcc_62416|Cycle_0|Type_1	29,31	32193878,32194199	psi1:0.722222222222,psi2:0	C1_26,C2_0	C1_10,C2_0	Yes
ENSG00000121753	BAI2	chr1:32193175-32193813	-	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,57,31	32193206,32193626,32193682,32193783	No	No	No	bcc_62415|Cycle_1|Type_1	31,31	32193206,32193783	psi1:0.93023255814,psi2:0	C1_40,C2_0	C1_3,C2_0	Yes
ENSG00000099834	CDHR5	chr11:618914-619336	-	altA	240	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):619306,619180	266,31	619180,619306	No	Yes	No	bcc_62344|Cycle_87|Type_1	26,31	618940,619306	psi1:0,psi2:0.846153846154	C1_0,C2_22	C1_0,C2_4	Yes
ENSG00000099834	CDHR5	chr11:618914-619336	-	altA	222	No	Yes	protein_coding	1_ss_annotated_(over_3_ss):619306	248,31	619162,619306	No	Yes	No	bcc_62344|Cycle_78|Type_1	26,31	618940,619306	psi1:0,psi2:0.826086956522	C1_0,C2_19	C1_0,C2_4	Yes
ENSG00000099834	CDHR5	chr11:618082-619502	-	ES	85	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,85,29	618111,619306,619390,619474	No	Yes	No	bcc_62344|Cycle_62|Type_1	29,29	618111,619474	psi1:0,psi2:0.918032786885	C1_0,C2_56	C1_0,C2_5	Yes
ENSG00000099834	CDHR5	chr11:619134-619335	-	altA	18	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):619306,619180	46,30	619180,619306	No	Yes	No	bcc_62344|Cycle_43|Type_1	28,30	619162,619306	psi1:0,psi2:0.666666666667	C1_0,C2_10	C1_0,C2_5	Yes
ENSG00000128596	CCDC136	chr7:128441505-128444732	+	altD	27	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):128444704,128441563	58,29	128441563,128444704	No	Yes	No	bcc_62272|Cycle_2|Type_1	31,29	128441536,128444704	psi1:0.782608695652,psi2:0	C1_36,C2_0	C1_10,C2_0	Yes
ENSG00000128596	CCDC136	chr7:128441496-128444733	+	altD	36	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	67,30	128441563,128444704	No	Yes	No	bcc_62272|Cycle_1|Type_1	31,30	128441527,128444704	psi1:0.764705882353,psi2:0	C1_39,C2_0	C1_12,C2_0	Yes
ENSG00000128596	CCDC136	chr7:128441496-128444733	+	altD	9	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):128444704,128441527	40,30	128441536,128444704	No	Yes	No	bcc_62272|Cycle_0|Type_1	31,30	128441527,128444704	psi1:0.52,psi2:0	C1_13,C2_0	C1_12,C2_0	Yes
-	unknown_gene	chr1:56956848-56956915	0	deletion	8	Yes	-	-	no_ss	67	56956848	No	No	No	bcc_62219|Cycle_0|Type_1	28,31	56956876,56956885	psi1:0,psi2:0.5625	C1_0,C2_9	C1_0,C2_7	-
ENSG00000137161	CNPY3	chr6:42903181-42903341	+	altA	37	Yes	-	protein_coding	1_ss_annotated_(over_3_ss):42903312	30,67	42903211,42903275	No	Yes	No	bcc_62085|Cycle_3|Type_1	30,30	42903211,42903312	psi1:0,psi2:0.333333333333	C1_0,C2_3	C1_0,C2_6	Yes
ENSG00000223572	CKMT1A	chr15:43988531-43990869	+	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,135,31	43988561,43990212,43990346,43990839	Yes	No	No	bcc_62066|Cycle_0|Type_1	30,31	43988561,43990839	psi1:0.962962962963,psi2:0	C1_182,C2_0	C1_7,C2_0	Yes
ENSG00000237289	CKMT1B	chr15:43888699-43891055	+	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,135,31	43888729,43890391,43890525,43891025	Yes	No	No	bcc_62066|Cycle_0|Type_1	30,31	43888729,43891025	psi1:0.962962962963,psi2:0	C1_182,C2_0	C1_7,C2_0	Yes
ENSG00000183036	PCP4	chr21:41239405-41300938	+	ES	52	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,52,30	41239436,41270401,41270452,41300909	No	No	No	bcc_61974|Cycle_0|Type_1	31,30	41239436,41300909	psi1:0.978540772532,psi2:0	C1_228,C2_0	C1_5,C2_0	Yes
ENSG00000166405	RIC3	chr11:8148320-8159849	-	ES	94	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,94,31	8148351,8158925,8159018,8159819	No	No	No	bcc_61792|Cycle_0|Type_1	31,31	8148351,8159819	psi1:0.896551724138,psi2:0	C1_26,C2_0	C1_3,C2_0	Yes
ENSG00000227544	AC018647.3	chr7:35756447-35758707	+	ES	98	Yes	-	lincRNA	all_splice_sites_known_(4_ss)	31,98,28	35756478,35756641,35756738,35758680	No	No	No	bcc_61591|Cycle_0|Type_1	31,28	35756478,35758680	psi1:0.32,psi2:0	C1_8,C2_0	C1_17,C2_0	Yes
ENSG00000157445	CACNA2D3	chr3:55108387-55108452	-	deletion	7	Yes	-	protein_coding	no_known_ss	65	55108387	No	No	No	bcc_61402|Cycle_0|Type_1	27,31	55108414,55108422	psi1:0.692307692308,psi2:0	C1_9,C2_0	C1_4,C2_0	-
ENSG00000005187	ACSM3	chr16:20788871-20792326	+	ES	144	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,144,31	20788902,20792036,20792179,20792296	No	No	No	bcc_60783|Cycle_0|Type_1	31,31	20788902,20792296	psi1:0,psi2:0.948275862069	C1_0,C2_55	C1_0,C2_3	Yes
ENSG00000182732	RGS6	chr14:72945006-72976890	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,111,29	72945037,72961860,72961970,72976862	No	No	No	bcc_60642|Cycle_0|Type_1	31,29	72945037,72976862	psi1:0.842105263158,psi2:0	C1_16,C2_0	C1_3,C2_0	Yes
-	unknown_gene	chr3:16279808-16279867	0	deletion	3	No	-	-	no_ss	59	16279808	No	No	No	bcc_60136|Cycle_0|Type_1	25,31	16279833,16279837	psi1:0.571428571429,psi2:0	C1_4,C2_0	C1_3,C2_0	-
ENSG00000176919	C8G	chr9:139840613-139840946	+	IR	272	Yes	Yes	protein_coding	no_known_ss	333	-	No	No	No	bcc_59718|Cycle_0|Type_1	31,30	139840644,139840917	psi1:0,psi2:0.226277372263	C1_0,C2_31	C1_0,C2_106	Yes
ENSG00000142583	SLC2A5	chr1:9117599-9118241	-	altA	38	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):9118211,9117667	68,31	9117667,9118211	No	No	No	bcc_59693|Cycle_0|Type_1	30,31	9117629,9118211	psi1:0.939393939394,psi2:0	C1_31,C2_0	C1_2,C2_0	Yes
ENSG00000107736	CDH23	chr10:73233015-73233199	-	IR	122	Yes	-	protein_coding	no_known_ss	184	-	No	No	No	bcc_59648|Cycle_0|Type_1	31,31	73233046,73233169	psi1:0,psi2:0.84	C1_0,C2_21	C1_0,C2_4	Yes
ENSG00000171603	CLSTN1	chr1:9815338-9833360	-	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,30,31	9815367,9816539,9816568,9833330	No	No	No	bcc_5944|Cycle_0|Type_1	29,31	9815367,9833330	psi1:0.285714285714,psi2:0	C1_12,C2_0	C1_30,C2_0	Yes
ENSG00000104938	CLEC4M	chr19:7831662-7833751	+	ES	113	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,113,28	7831693,7832402,7832514,7833724	No	No	No	bcc_59118|Cycle_0|Type_1	31,28	7831693,7833724	psi1:0,psi2:0.978947368421	C1_0,C2_93	C1_0,C2_2	Yes
ENSG00000161681	SHANK1	chr19:51190039-51190869	-	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,24,31	51190069,51190274,51190297,51190839	No	No	No	bcc_58968|Cycle_0|Type_1	30,31	51190069,51190839	psi1:0.222222222222,psi2:0	C1_4,C2_0	C1_14,C2_0	Yes
ENSG00000161681	SHANK1	chr19:51192507-51200875	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,27,30	51192536,51200353,51200379,51200846	No	No	No	bcc_58967|Cycle_0|Type_1	29,30	51192536,51200846	psi1:0.5,psi2:0	C1_9,C2_0	C1_9,C2_0	Yes
ENSG00000170579	DLGAP1	chr18:3582216-3729165	-	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,30,31	3582246,3656084,3656113,3729135	No	No	No	bcc_58938|Cycle_0|Type_1	30,31	3582246,3729135	psi1:0.714285714286,psi2:0	C1_20,C2_0	C1_8,C2_0	Yes
ENSG00000170579	DLGAP1	chr18:3814243-3874181	-	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,34	3814273,3874148	No	No	No	bcc_58937|Cycle_0|Type_1	30,28	3814273,3874154	psi1:0.235294117647,psi2:0	C1_4,C2_0	C1_13,C2_0	Yes
ENSG00000118160	SLC8A2	chr19:47941201-47944624	-	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,18,31	47941230,47944426,47944443,47944594	No	No	No	bcc_58658|Cycle_0|Type_1	29,31	47941230,47944594	psi1:0.9,psi2:0	C1_36,C2_0	C1_4,C2_0	Yes
ENSG00000187672	ERC2	chr3:56026247-56041239	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,36,31	56026278,56037127,56037162,56041209	No	No	No	bcc_58610|Cycle_0|Type_1	31,31	56026278,56041209	psi1:0.692307692308,psi2:0	C1_9,C2_0	C1_4,C2_0	Yes
ENSG00000132692	BCAN	chr1:156627518-156628364	+	ES	145	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,145,30	156627549,156627919,156628063,156628335	No	No	No	bcc_58594|Cycle_0|Type_1	31,30	156627549,156628335	psi1:0.969230769231,psi2:0	C1_63,C2_0	C1_2,C2_0	Yes
ENSG00000163281	GNPDA2	chr4:44720397-44728520	-	ES	159	No	-	protein_coding	all_splice_sites_known_(4_ss)	30,159,30	44720427,44724101,44724259,44728491	No	No	No	bcc_58276|Cycle_0|Type_1	30,30	44720427,44728491	psi1:0.916666666667,psi2:0	C1_22,C2_0	C1_2,C2_0	Yes
ENSG00000263085	C17orf58	chr17:65987480-65987543	-	deletion	3	No	-	protein_coding	no_known_ss	63	65987480	No	No	No	bcc_58077|Cycle_0|Type_1	29,31	65987509,65987513	psi1:0.375,psi2:0.375	C1_6,C2_6	C1_10,C2_10	-
ENSG00000182504	CEP97	chr3:101487831-101487896	-	deletion	3	No	-	protein_coding	no_known_ss	65	101487831	No	No	No	bcc_57956|Cycle_0|Type_1	31,31	101487862,101487866	psi1:0.75,psi2:0	C1_9,C2_0	C1_3,C2_0	-
ENSG00000187546	AGMO	chr7:15430346-15433767	-	ES	66	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,66,30	15430375,15430465,15430530,15433738	No	No	No	bcc_57484|Cycle_0|Type_1	29,30	15430375,15433738	psi1:0,psi2:0.965517241379	C1_0,C2_56	C1_0,C2_2	Yes
ENSG00000106976	DNM1	chr9:131013188-131016962	+	ES	37	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,37,30	131013219,131015380,131015416,131016933	No	Yes	No	bcc_57439|Cycle_2|Type_1	31,30	131013219,131016933	psi1:0.857142857143,psi2:0	C1_12,C2_0	C1_2,C2_0	Yes
ENSG00000106976	DNM1	chr9:131015385-131016317	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):131015416,131016288	31,33	131015416,131016285	No	Yes	No	bcc_57439|Cycle_0|Type_1	31,30	131015416,131016288	psi1:0.75,psi2:0	C1_6,C2_0	C1_2,C2_0	Yes
ENSG00000077157	PPP1R12B	chr1:202533644-202536936	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	202533675,202536906	No	No	No	bcc_57222|Cycle_0|Type_1	31,28	202533675,202536909	psi1:0.5,psi2:0	C1_6,C2_0	C1_6,C2_0	Yes
ENSG00000165478	HEPACAM	chr11:124792685-124793266	-	altA	21	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):124792714,124793236	50,31	124792735,124793236	No	No	No	bcc_57203|Cycle_0|Type_1	29,31	124792714,124793236	psi1:0.19801980198,psi2:0	C1_20,C2_0	C1_81,C2_0	Yes
ENSG00000165478	HEPACAM	chr11:124792322-124792671	-	altAD	159	No	-	protein_coding	2_ss_annotated_(over_4_ss):124792641,124792354	32,187	124792354,124792485	No	Yes	No	bcc_57201|Cycle_2|Type_1	29,31	124792351,124792641	psi1:0.69696969697,psi2:0	C1_23,C2_0	C1_10,C2_0	Yes
ENSG00000138075	ABCG5	chr2:44052126-44055152	-	ES	140	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,140,31	44052157,44053521,44053660,44055122	No	No	No	bcc_57190|Cycle_0|Type_1	31,31	44052157,44055122	psi1:0,psi2:0.791666666667	C1_0,C2_19	C1_0,C2_5	Yes
ENSG00000184368	MAP7D2	chrX:20073887-20074826	-	altA	33	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	63,29	20073950,20074798	No	No	No	bcc_57112|Cycle_0|Type_1	30,29	20073917,20074798	psi1:0.733333333333,psi2:0	C1_11,C2_0	C1_4,C2_0	Yes
ENSG00000095203	EPB41L4B	chr9:111956646-111962545	-	altA	9	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):111962516,111956677	40,30	111956686,111962516	No	No	No	bcc_57045|Cycle_0|Type_1	31,30	111956677,111962516	psi1:0.5,psi2:0	C1_3,C2_0	C1_3,C2_0	Yes
ENSG00000198055	GRK6	chr5:176831635-176831841	+	IR	145	Yes	Yes	protein_coding	no_known_ss	206	-	No	No	No	bcc_56942|Cycle_0|Type_1	30,31	176831665,176831811	psi1:0,psi2:0.138888888889	C1_0,C2_15	C1_0,C2_93	(CT:176831665,AC:176831811)
ENSG00000055813	CCDC85A	chr2:56420544-56611430	+	ES	77	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,77,30	56420575,56570014,56570090,56611401	No	No	No	bcc_56885|Cycle_0|Type_1	31,30	56420575,56611401	psi1:0.833333333333,psi2:0	C1_15,C2_0	C1_3,C2_0	Yes
ENSG00000008086	CDKL5	chrX:18616651-18622050	+	altD	51	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):18616733,18622022	82,29	18616733,18622022	No	No	No	bcc_56799|Cycle_0|Type_1	31,29	18616682,18622022	psi1:0.636363636364,psi2:0	C1_7,C2_0	C1_4,C2_0	Yes
ENSG00000129214	SHBG	chr17:7535302-7536552	+	ES	208	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,208,31	7535333,7536070,7536277,7536522	No	No	No	bcc_56770|Cycle_0|Type_1	31,31	7535333,7536522	psi1:0,psi2:0.943661971831	C1_0,C2_67	C1_0,C2_4	Yes
ENSG00000157445	CACNA2D3	chr3:54913085-54914852	+	ES	62	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,62,30	54913116,54913377,54913438,54914823	No	No	No	bcc_56711|Cycle_0|Type_1	31,30	54913116,54914823	psi1:0.965517241379,psi2:0	C1_28,C2_0	C1_1,C2_0	Yes
ENSG00000132702	HAPLN2	chr1:156589297-156589838	+	altA	49	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,78	156589327,156589761	No	No	No	bcc_56693|Cycle_0|Type_1	30,29	156589327,156589810	psi1:0.54,psi2:0	C1_27,C2_0	C1_23,C2_0	Yes
ENSG00000158856	DMTN	chr8:21924373-21925067	+	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,75,30	21924404,21924596,21924670,21925038	No	No	No	bcc_56675|Cycle_0|Type_1	31,30	21924404,21925038	psi1:0.379310344828,psi2:0	C1_11,C2_0	C1_18,C2_0	Yes
ENSG00000158856	DMTN	chr8:21912487-21924377	+	altA	133	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,162	21912518,21924216	No	No	No	bcc_56674|Cycle_0|Type_1	31,29	21912518,21924349	psi1:0.819672131148,psi2:0	C1_50,C2_0	C1_11,C2_0	Yes
ENSG00000100557	C14orf105	chr14:57948346-57949813	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	32,31	57948378,57949783	No	No	No	bcc_56659|Cycle_0|Type_1	29,31	57948375,57949783	psi1:0,psi2:0.583333333333	C1_0,C2_14	C1_0,C2_10	Yes
ENSG00000100557	C14orf105	chr14:57957754-57960241	-	altA	7	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):57960211,57957789	35,31	57957789,57960211	No	No	No	bcc_56658|Cycle_0|Type_1	28,31	57957782,57960211	psi1:0,psi2:0.866666666667	C1_0,C2_13	C1_0,C2_2	Yes
ENSG00000225485	ARHGAP23	chr17:36654721-36656868	+	ES	23	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,23,30	36654752,36655174,36655196,36656839	No	No	No	bcc_56647|Cycle_0|Type_1	31,30	36654752,36656839	psi1:0.823529411765,psi2:0	C1_14,C2_0	C1_3,C2_0	Yes
ENSG00000073350	LLGL2	chr17:73570718-73570983	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	73570749,73570952	No	No	No	bcc_56602|Cycle_0|Type_1	31,29	73570749,73570955	psi1:0,psi2:0.571428571429	C1_0,C2_4	C1_0,C2_3	Yes
ENSG00000009950	MLXIPL	chr7:73011086-73011225	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	73011119,73011195	No	No	No	bcc_56539|Cycle_0|Type_1	30,31	73011116,73011195	psi1:0,psi2:0.736842105263	C1_0,C2_14	C1_0,C2_5	Yes
ENSG00000130224	LRCH2	chrX:114358538-114364748	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,51,31	114358565,114361406,114361456,114364718	No	No	No	bcc_56388|Cycle_0|Type_1	27,31	114358565,114364718	psi1:0.625,psi2:0	C1_5,C2_0	C1_3,C2_0	Yes
ENSG00000106829	TLE4	chr9:82227602-82264764	+	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,75,30	82227633,82242289,82242363,82264735	No	Yes	No	bcc_56361|Cycle_0|Type_1	31,30	82227633,82264735	psi1:0.714285714286,psi2:0	C1_10,C2_0	C1_4,C2_0	Yes
ENSG00000241224	RP11-59E19.1	chr3:108855713-108868681	+	ES	134	Yes	-	lincRNA	all_splice_sites_known_(4_ss)	30,134,30	108855743,108867100,108867233,108868652	No	No	No	bcc_56122|Cycle_1|Type_1	30,30	108855743,108868652	psi1:0,psi2:0.926470588235	C1_0,C2_63	C1_0,C2_5	Yes
ENSG00000176884	GRIN1	chr9:140040323-140043486	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,26	140040354,140042604,140042666,140043461	No	No	No	bcc_56104|Cycle_0|Type_1	31,26	140040354,140043461	psi1:0.650793650794,psi2:0	C1_41,C2_0	C1_22,C2_0	Yes
ENSG00000242797	GLYCTK-AS1	chr3:52327177-52327351	+	IR	114	No	-	processed_transcript	no_known_ss	174	-	No	No	No	bcc_56071|Cycle_0|Type_1	31,29	52327208,52327323	psi1:0,psi2:0.78125	C1_0,C2_125	C1_0,C2_35	Yes
ENSG00000166183	ASPG	chr14:104578308-104578891	+	altA	18	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,49	104578337,104578843	No	No	No	bcc_55882|Cycle_0|Type_1	29,31	104578337,104578861	psi1:0,psi2:0.444444444444	C1_0,C2_40	C1_0,C2_50	Yes
ENSG00000166183	ASPG	chr14:104575623-104578287	+	ES	100	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,100,31	104575652,104577839,104577938,104578257	No	No	No	bcc_55881|Cycle_0|Type_1	29,31	104575652,104578257	psi1:0,psi2:0.859154929577	C1_0,C2_61	C1_0,C2_10	Yes
ENSG00000166183	ASPG	chr14:104571757-104573548	+	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,96,30	104571787,104573136,104573231,104573519	No	No	No	bcc_55879|Cycle_0|Type_1	30,30	104571787,104573519	psi1:0,psi2:0.951612903226	C1_0,C2_59	C1_0,C2_3	Yes
ENSG00000166183	ASPG	chr14:104563945-104570670	+	ES_MULTI	240	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,127,113,30	104563974,104565190,104565316,104569900,104570012,104570641	No	No	No	bcc_55878|Cycle_0|Type_1	29,30	104563974,104570641	psi1:0,psi2:0.973214285714	C1_0,C2_109	C1_0,C2_3	Yes
ENSG00000006128	TAC1	chr7:97363100-97365615	+	ES	45	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,45,24,5	97363131,97363560,97363604,97364138,97364161,97365611	No	No	No	bcc_55862|Cycle_0|Type_1	31,24,5	97363131,97364138,97364161,97365611	psi1:0.909090909091,psi2:0	C1_20,C2_0	C1_2,C2_0	Yes
ENSG00000127328	RAB3IP	chr12:70212408-70212471	+	deletion	3	No	-	protein_coding	no_known_ss	63	70212408	No	No	No	bcc_55791|Cycle_0|Type_1	29,31	70212437,70212441	psi1:0.75,psi2:0	C1_12,C2_0	C1_4,C2_0	-
ENSG00000183454	GRIN2A	chr16:9857258-9857658	+	IR	343	Yes	Yes	protein_coding	no_known_ss	400	-	No	No	No	bcc_55787|Cycle_0|Type_1	27,30	9857285,9857629	psi1:0.891891891892,psi2:0	C1_33,C2_0	C1_4,C2_0	(CT:9857285,AC:9857629)
ENSG00000145725	PPIP5K2	chr5:102493986-102494187	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):102494017,102494156	31,32	102494017,102494156	No	No	No	bcc_55775|Cycle_0|Type_1	31,29	102494017,102494159	psi1:0.75,psi2:0.75	C1_3,C2_3	C1_1,C2_1	Yes
ENSG00000173153	ESRRA	chr11:64081809-64082243	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,31	64081839,64082213	No	No	No	bcc_55643|Cycle_0|Type_1	30,28	64081839,64082216	psi1:0.75,psi2:0.75	C1_3,C2_18	C1_1,C2_6	Yes
ENSG00000253729	PRKDC	chr8:48751779-48752607	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):48752577,48751807	31,31	48751810,48752577	No	No	No	bcc_55598|Cycle_0|Type_1	28,31	48751807,48752577	psi1:0.3125,psi2:0	C1_5,C2_0	C1_11,C2_0	Yes
ENSG00000102103	PQBP1	chrX:48759288-48760038	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):48760009,48759319	31,30	48759319,48760009	No	Yes	No	bcc_55569|Cycle_1|Type_1	31,27	48759319,48760012	psi1:0.75,psi2:0	C1_9,C2_0	C1_3,C2_0	Yes
ENSG00000100652	SLC10A1	chr14:70245216-70252843	-	ES	179	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,179,30	70245246,70245899,70246077,70252814	No	No	No	bcc_55536|Cycle_0|Type_1	30,30	70245246,70252814	psi1:0,psi2:0.97619047619	C1_0,C2_82	C1_0,C2_2	Yes
ENSG00000269699,ENSG00000198300	ZIM2,PEG3	chr19:57335767-57347416	-	ES	76	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	28,76,31	57335795,57337756,57337831,57347386	No	No	No	bcc_55521|Cycle_0|Type_1	28,31	57335795,57347386	psi1:0.264705882353,psi2:0	C1_9,C2_0	C1_25,C2_0	Yes
ENSG00000116871	MAP7D1	chr1:36641848-36642067	+	altAD	67	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):36641922,36642019	74,49	36641922,36642019	No	No	No	bcc_55336|Cycle_0|Type_1	25,31	36641873,36642037	psi1:0.842105263158,psi2:0	C1_16,C2_0	C1_3,C2_0	(GC:36641873,GC:36642037);(GT:36641922,AG:36642019)
ENSG00000164659	KIAA1324L	chr7:86574331-86577225	-	altD	152	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):86574362,86577043	31,183	86574362,86577043	No	No	No	bcc_55302|Cycle_0|Type_1	31,31	86574362,86577195	psi1:0.925925925926,psi2:0	C1_25,C2_0	C1_2,C2_0	Yes
ENSG00000224078	SNHG14	chr15:25340844-25342496	+	altD	100	Yes	-	processed_transcript	2_ss_annotated_(over_3_ss):25340875,25342468	131,29	25340975,25342468	No	Yes	No	bcc_55215|Cycle_0|Type_1	31,29	25340875,25342468	psi1:0.875,psi2:0	C1_28,C2_0	C1_4,C2_0	Yes
ENSG00000121410	A1BG	chr19:58863023-58863679	-	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,87,31	58863053,58863464,58863550,58863649	No	No	No	bcc_55178|Cycle_0|Type_1	30,31	58863053,58863649	psi1:0,psi2:0.159817351598	C1_0,C2_70	C1_0,C2_368	Yes
ENSG00000138115	CYP2C8	chr10:96827417-96829022	-	altD	38	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,69	96827448,96828954	No	No	No	bcc_5506|Cycle_0|Type_1	31,31	96827448,96828992	psi1:0,psi2:0.13813229572	C1_0,C2_71	C1_0,C2_443	Yes
ENSG00000184672	RALYL	chr8:85686858-85762244	+	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,33,30	85686889,85717005,85717037,85762215	No	No	No	bcc_54926|Cycle_0|Type_1	31,30	85686889,85762215	psi1:0.857142857143,psi2:0	C1_18,C2_0	C1_3,C2_0	Yes
ENSG00000229807	XIST	chrX:73047732-73048928	-	altA	56	Yes	-	lincRNA	all_splice_sites_known_(3_ss)	87,26	73047819,73048903	No	No	No	bcc_54897|Cycle_0|Type_1	31,26	73047763,73048903	psi1:0.846153846154,psi2:0	C1_22,C2_0	C1_4,C2_0	Yes
ENSG00000122705	CLTA	chr9:36204145-36210652	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,54,31	36204176,36209264,36209317,36210622	No	Yes	No	bcc_54892|Cycle_8|Type_1	31,31	36204176,36210622	psi1:0.916083916084,psi2:0	C1_131,C2_0	C1_12,C2_0	Yes
ENSG00000122705	CLTA	chr9:36209286-36211630	+	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,36,31	36209317,36210622,36210657,36211600	No	Yes	No	bcc_54892|Cycle_3|Type_1	31,31	36209317,36211600	psi1:0.578651685393,psi2:0	C1_103,C2_0	C1_75,C2_0	Yes
ENSG00000114757	PEX5L	chr3:179593235-179605491	-	ES	195	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,195,31	179593265,179597717,179597911,179605461	No	No	No	bcc_54840|Cycle_0|Type_1	30,31	179593265,179605461	psi1:0.970588235294,psi2:0	C1_66,C2_0	C1_2,C2_0	Yes
ENSG00000114757	PEX5L	chr3:179615998-179689411	-	altA	7	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):179616034,179689382	36,30	179616034,179689382	No	No	No	bcc_54839|Cycle_0|Type_1	29,30	179616027,179689382	psi1:0.913043478261,psi2:0	C1_21,C2_0	C1_2,C2_0	Yes
ENSG00000109832	DDX25	chr11:125788654-125792745	+	ES	189	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,189,31	125788685,125791086,125791274,125792715	No	No	No	bcc_54832|Cycle_0|Type_1	31,31	125788685,125792715	psi1:0.846153846154,psi2:0	C1_44,C2_0	C1_8,C2_0	Yes
ENSG00000170390	DCLK2	chr4:151170731-151177201	+	altD	74	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):151177172,151170836	105,30	151170836,151177172	No	No	No	bcc_54577|Cycle_0|Type_1	31,30	151170762,151177172	psi1:0.916666666667,psi2:0	C1_44,C2_0	C1_4,C2_0	Yes
ENSG00000107771	CCSER2	chr10:86259684-86273235	+	ES	40	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,40,31	86259715,86267050,86267089,86273205	No	Yes	No	bcc_54529|Cycle_0|Type_1	31,31	86259715,86273205	psi1:0.291666666667,psi2:0	C1_7,C2_0	C1_17,C2_0	Yes
ENSG00000125462	C1orf61	chr1:156374362-156377664	-	ES	118	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,118,31	156374393,156376872,156376989,156377634	No	Yes	No	bcc_53917|Cycle_8|Type_1	31,31	156374393,156377634	psi1:0.46875,psi2:0	C1_15,C2_0	C1_17,C2_0	Yes
ENSG00000125462	C1orf61	chr1:156374363-156384476	-	ES_MULTI	252	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,118,134,31	156374393,156376872,156376989,156377634,156377767,156384446	No	Yes	No	bcc_53917|Cycle_4|Type_1	30,31	156374393,156384446	psi1:0.378787878788,psi2:0	C1_25,C2_0	C1_41,C2_0	Yes
ENSG00000125462	C1orf61	chr1:156374363-156396620	-	ES	100	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,100,31	156374393,156384446,156384545,156396590	No	Yes	Yes	bcc_53917|Cycle_3|Type_1	30,31	156374393,156396590	psi1:0.438775510204,psi2:0	C1_43,C2_0	C1_55,C2_0	Yes
ENSG00000125462	C1orf61	chr1:156374362-156391377	-	ES	100	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,100,31	156374393,156384446,156384545,156391347	No	Yes	No	bcc_53917|Cycle_25|Type_1	31,31	156374393,156391347	psi1:0.413461538462,psi2:0	C1_43,C2_0	C1_61,C2_0	Yes
ENSG00000125462	C1orf61	chr1:156374363-156396620	-	ES_MULTI	352	Yes	Yes	protein_coding	all_splice_sites_known_(8_ss)	30,118,134,100,31	156374393,156376872,156376989,156377634,156377767,156384446,156384545,156396590	No	Yes	Yes	bcc_53917|Cycle_1|Type_1	30,31	156374393,156396590	psi1:0.360465116279,psi2:0	C1_31,C2_0	C1_55,C2_0	Yes
ENSG00000125462	C1orf61	chr1:156374362-156396620	-	ES_MULTI	234	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,134,100,31	156374393,156377634,156377767,156384446,156384545,156396590	No	Yes	Yes	bcc_53917|Cycle_17|Type_1	31,31	156374393,156396590	psi1:0.379310344828,psi2:0	C1_33,C2_0	C1_54,C2_0	Yes
ENSG00000125462	C1orf61	chr1:156374362-156391377	-	ES_MULTI	352	Yes	-	protein_coding	all_splice_sites_known_(8_ss)	31,118,134,100,31	156374393,156376872,156376989,156377634,156377767,156384446,156384545,156391347	No	Yes	No	bcc_53917|Cycle_13|Type_1	31,31	156374393,156391347	psi1:0.32967032967,psi2:0	C1_30,C2_0	C1_61,C2_0	Yes
ENSG00000125462	C1orf61	chr1:156374362-156391377	-	ES_MULTI	234	No	-	protein_coding	all_splice_sites_known_(6_ss)	31,134,100,31	156374393,156377634,156377767,156384446,156384545,156391347	No	Yes	No	bcc_53917|Cycle_12|Type_1	31,31	156374393,156391347	psi1:0.336956521739,psi2:0	C1_31,C2_0	C1_61,C2_0	Yes
ENSG00000125462	C1orf61	chr1:156374362-156384476	-	ES	134	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,134,31	156374393,156377634,156377767,156384446	No	Yes	No	bcc_53917|Cycle_11|Type_1	31,31	156374393,156384446	psi1:0.397058823529,psi2:0	C1_27,C2_0	C1_41,C2_0	Yes
ENSG00000186231	KLHL32	chr6:97489444-97533029	+	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,99,28	97489475,97512504,97512602,97533002	No	Yes	No	bcc_53684|Cycle_1|Type_1	31,28	97489475,97533002	psi1:0.925925925926,psi2:0	C1_25,C2_0	C1_2,C2_0	Yes
ENSG00000186231	KLHL32	chr6:97512571-97561686	+	ES	216	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,216,28	97512602,97533002,97533217,97561659	No	Yes	No	bcc_53684|Cycle_0|Type_1	31,28	97512602,97561659	psi1:0.875,psi2:0	C1_28,C2_0	C1_4,C2_0	Yes
ENSG00000145721	LIX1	chr5:96430687-96432544	-	altA	24	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):96432514,96430739	52,31	96430739,96432514	No	No	No	bcc_53564|Cycle_0|Type_1	28,31	96430715,96432514	psi1:0.692307692308,psi2:0	C1_9,C2_0	C1_4,C2_0	Yes
ENSG00000185565	LSAMP	chr3:115529230-115560722	-	ES_MULTI	69	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,33,36,31	115529261,115535461,115535493,115553409,115553444,115560692	No	No	No	bcc_5321|Cycle_0|Type_1	31,31	115529261,115560692	psi1:0.789473684211,psi2:0	C1_15,C2_0	C1_4,C2_0	Yes
ENSG00000122545	SEPT7	chr7:35840849-35872441	+	unclassified	3	No	Yes	protein_coding	3_ss_annotated_(over_6_ss):35840880,35871102,35872408	31,5,28	35840880,35871102,35871106,35872414	No	Yes	No	bcc_5294|Cycle_2|Type_1	31,1,29	35840880,35872408,35872408,35872413	psi1:0.391891891892,psi2:0	C1_29,C2_0	C1_45,C2_0	(GT:35871106,AG:35872414);(AA:35872408,CA:35872413);(GT:35840880,AG:35871102);(GT:35840880,AG:35872408)
ENSG00000002933	TMEM176A	chr7:150497885-150498651	+	altD	140	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	171,28	150498056,150498624	No	Yes	Yes	bcc_52939|Cycle_3|Type_1	31,28	150497916,150498624	psi1:0,psi2:0.897959183673	C1_0,C2_220	C1_0,C2_25	Yes
ENSG00000161944	ASGR2	chr17:7012179-7017522	-	altD	57	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	28,87	7012207,7017436	No	Yes	No	bcc_52936|Cycle_7|Type_1	28,30	7012207,7017493	psi1:0,psi2:0.552287581699	C1_0,C2_169	C1_0,C2_137	(AC:7017493,CT:7012207);(GC:7017436,CT:7012207)
ENSG00000161944	ASGR2	chr17:7011845-7012118	-	altD	36	No	-	protein_coding	2_ss_annotated_(over_3_ss):7012091,7011876	31,64	7011876,7012055	No	Yes	No	bcc_52936|Cycle_5|Type_1	31,28	7011876,7012091	psi1:0,psi2:0.0790378006873	C1_0,C2_23	C1_0,C2_268	Yes
ENSG00000161944	ASGR2	chr17:7011845-7017520	-	ES_altD	174	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,117,85	7011876,7012091,7012207,7017436	No	Yes	No	bcc_52936|Cycle_4|Type_1	31,28	7011876,7017493	psi1:0,psi2:0.9584	C1_0,C2_599	C1_0,C2_26	(AC:7017493,CT:7011876);(GC:7017436,CT:7012207);(AC:7012091,CT:7011876)
ENSG00000161944	ASGR2	chr17:7011845-7017522	-	ES	117	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,117,30	7011876,7012091,7012207,7017493	No	Yes	No	bcc_52936|Cycle_3|Type_1	31,30	7011876,7017493	psi1:0,psi2:0.957723577236	C1_0,C2_589	C1_0,C2_26	Yes
ENSG00000161944	ASGR2	chr17:7011846-7017520	-	ES_altD	210	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):7017436,7012207,7011876,7017493	30,153,85	7011876,7012055,7012207,7017436	No	Yes	No	bcc_52936|Cycle_1|Type_1	30,28	7011876,7017493	psi1:0,psi2:0.928961748634	C1_0,C2_340	C1_0,C2_26	(AC:7017493,CT:7011876);(GC:7017436,CT:7012207);(AC:7012055,CT:7011876)
ENSG00000161944	ASGR2	chr17:7011846-7017522	-	ES	153	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):7012207,7011876,7017493	30,153,30	7011876,7012055,7012207,7017493	No	Yes	No	bcc_52936|Cycle_0|Type_1	30,30	7011876,7017493	psi1:0,psi2:0.926966292135	C1_0,C2_330	C1_0,C2_26	Yes
ENSG00000008056	SYN1	chrX:47432329-47433431	-	altA	38	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	69,31	47432398,47433401	No	No	No	bcc_52716|Cycle_0|Type_1	31,31	47432360,47433401	psi1:0.611111111111,psi2:0	C1_33,C2_0	C1_21,C2_0	Yes
ENSG00000076770	MBNL3	chrX:131516270-131520719	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,36,31	131516300,131518691,131518726,131520689	No	No	No	bcc_52608|Cycle_0|Type_1	30,31	131516300,131520689	psi1:0,psi2:0.529411764706	C1_0,C2_9	C1_0,C2_8	Yes
ENSG00000099256	PRTFDC1	chr10:25226266-25241486	-	ES	107	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,107,30	25226296,25231259,25231365,25241457	No	No	No	bcc_52580|Cycle_0|Type_1	30,30	25226296,25241457	psi1:0.941176470588,psi2:0	C1_32,C2_0	C1_2,C2_0	Yes
-	unknown_gene	chr8:18244390-18245602	0	alt	126	No	-	-	no_ss	156,28	18244546,18245575	No	No	No	bcc_52512|Cycle_0|Type_1	30,28	18244420,18245575	psi1:0,psi2:0.842105263158	C1_0,C2_16	C1_0,C2_3	-
ENSG00000120341,ENSG00000254154	SEC16B,RP4-798P15.3	chr1:177930044-177930754	-	altA	3	No	Yes	protein_coding,processed_transcript	all_splice_sites_known_(3_ss)	33,30	177930077,177930725	No	No	No	bcc_52443|Cycle_0|Type_1	30,30	177930074,177930725	psi1:0,psi2:0.363636363636	C1_0,C2_4	C1_0,C2_7	Yes
ENSG00000165566	AMER2	chr13:25745828-25746081	+	IR	193	Yes	-	protein_coding	no_known_ss	253	-	No	No	No	bcc_52209|Cycle_0|Type_1	29,31	25745857,25746051	psi1:0.9375,psi2:0	C1_30,C2_0	C1_2,C2_0	(CT:25745857,AC:25746051)
ENSG00000182902	SLC25A18	chr22:18043372-18062541	+	altAD	11	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):18043413,18062511	41,31	18043413,18062511	No	Yes	No	bcc_52202|Cycle_5|Type_1	23,38	18043395,18062504	psi1:0.76,psi2:0	C1_19,C2_0	C1_6,C2_0	(CT:18043395,AC:18062504);(GT:18043413,AG:18062511)
ENSG00000182902	SLC25A18	chr22:18049830-18050018	+	altD	12	No	-	protein_coding	2_ss_annotated_(over_3_ss):18049989,18049861	43,30	18049873,18049989	No	Yes	No	bcc_52202|Cycle_4|Type_1	31,30	18049861,18049989	psi1:0,psi2:0.787878787879	C1_0,C2_26	C1_0,C2_7	Yes
ENSG00000182902	SLC25A18	chr22:18043371-18050019	+	altD	11	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):18043413,18049989	42,31	18043413,18049989	No	Yes	No	bcc_52202|Cycle_1|Type_1	31,31	18043402,18049989	psi1:0.740740740741,psi2:0	C1_60,C2_0	C1_21,C2_0	(GC:18043402,AG:18049989);(GT:18043413,AG:18049989)
ENSG00000158169	FANCC	chr9:97864103-97873775	-	ES	204	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,204,31	97864132,97869348,97869551,97873745	No	No	No	bcc_52153|Cycle_0|Type_1	29,31	97864132,97873745	psi1:0,psi2:0.85	C1_0,C2_17	C1_0,C2_3	Yes
ENSG00000054690	PLEKHH1	chr14:68028721-68028882	+	altAD	100	Yes	-	protein_coding	2_ss_annotated_(over_4_ss):68028752,68028854	98,62	68028819,68028821	No	Yes	No	bcc_52110|Cycle_3|Type_1	31,29	68028752,68028854	psi1:0.285714285714,psi2:0	C1_6,C2_0	C1_15,C2_0	(GT:68028752,AG:68028854);-
ENSG00000054690	PLEKHH1	chr14:68028721-68028882	-	IR	101	Yes	Yes	protein_coding	no_known_ss	161	-	No	Yes	No	bcc_52110|Cycle_2|Type_1	31,29	68028752,68028854	psi1:0.318181818182,psi2:0	C1_7,C2_0	C1_15,C2_0	(AG:68028854,GT:68028752)
ENSG00000082458	DLG3	chrX:69715273-69718399	+	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,42,30	69715303,69717030,69717071,69718370	No	No	No	bcc_5208|Cycle_0|Type_1	30,30	69715303,69718370	psi1:0.666666666667,psi2:0	C1_36,C2_0	C1_18,C2_0	Yes
ENSG00000082458	DLG3	chrX:69718389-69719757	+	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,102,31	69718420,69719026,69719127,69719727	No	No	No	bcc_5207|Cycle_0|Type_1	31,31	69718420,69719727	psi1:0.934782608696,psi2:0	C1_43,C2_0	C1_3,C2_0	Yes
ENSG00000196872	KIAA1211L	chr2:99411104-99412612	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):99411134,99412583	33,30	99411137,99412583	No	No	No	bcc_52074|Cycle_0|Type_1	30,30	99411134,99412583	psi1:0.230769230769,psi2:0	C1_9,C2_0	C1_30,C2_0	Yes
ENSG00000123561	SERPINA7	chrX:105277663-105278256	-	altA	30	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):105278226,105277694	61,31	105277724,105278226	No	Yes	No	bcc_51991|Cycle_2|Type_1	31,31	105277694,105278226	psi1:0,psi2:0.0655172413793	C1_0,C2_19	C1_0,C2_271	Yes
ENSG00000123561	SERPINA7	chrX:105277663-105278256	-	altA	61	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	92,31	105277755,105278226	No	Yes	No	bcc_51991|Cycle_1|Type_1	31,31	105277694,105278226	psi1:0,psi2:0.212209302326	C1_0,C2_73	C1_0,C2_271	Yes
ENSG00000123561	SERPINA7	chrX:105277693-105278255	-	altA	31	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):105278226,105277755	62,30	105277755,105278226	No	Yes	No	bcc_51991|Cycle_0|Type_1	31,30	105277724,105278226	psi1:0,psi2:0.928571428571	C1_0,C2_65	C1_0,C2_5	Yes
ENSG00000131018	SYNE1	chr6:152776698-152779922	-	ES	159	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,159,31	152776725,152777021,152777179,152779892	No	No	No	bcc_51824|Cycle_0|Type_1	27,31	152776725,152779892	psi1:0.846153846154,psi2:0	C1_22,C2_0	C1_4,C2_0	Yes
ENSG00000148482	SLC39A12	chr10:18280201-18284614	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,111,30	18280232,18282110,18282220,18284585	No	No	No	bcc_5178|Cycle_0|Type_1	31,30	18280232,18284585	psi1:0.675675675676,psi2:0	C1_50,C2_0	C1_24,C2_0	Yes
ENSG00000144834	TAGLN3	chr3:111717930-111718298	+	altA	174	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,205	111717961,111718094	No	No	No	bcc_51519|Cycle_0|Type_1	31,31	111717961,111718268	psi1:0.766233766234,psi2:0	C1_59,C2_0	C1_18,C2_0	Yes
ENSG00000198848	CES1	chr16:55862853-55866946	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	55862886,55866916	No	No	No	bcc_51345|Cycle_0|Type_1	30,31	55862883,55866916	psi1:0,psi2:0.440154440154	C1_0,C2_114	C1_0,C2_145	Yes
ENSG00000120158	RCL1	chr9:4839828-4841234	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,33	4839859,4841202	No	No	No	bcc_51148|Cycle_0|Type_1	31,30	4839859,4841205	psi1:0,psi2:0.464285714286	C1_0,C2_13	C1_0,C2_15	Yes
ENSG00000165682	CLEC1B	chr12:10149847-10151666	-	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,99,31	10149878,10150881,10150979,10151636	No	No	No	bcc_50854|Cycle_1|Type_1	31,31	10149878,10151636	psi1:0,psi2:0.974576271186	C1_0,C2_115	C1_0,C2_3	Yes
ENSG00000110651	CD81	chr11:2397556-2411670	+	ES	100	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,100,29	2397587,2398051,2398150,2411642	No	No	No	bcc_50654|Cycle_0|Type_1	31,29	2397587,2411642	psi1:0,psi2:0.448275862069	C1_0,C2_13	C1_0,C2_16	Yes
ENSG00000184221	OLIG1	chr21:34443961-34444385	-	IR	366	No	-	protein_coding	no_known_ss	424	-	No	No	No	bcc_50626|Cycle_0|Type_1	30,28	34443991,34444358	psi1:0.989547038328,psi2:0	C1_284,C2_0	C1_3,C2_0	(AG:34444358,GT:34443991)
ENSG00000134121	CHL1	chr3:383734-386302	+	ES	48	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,48,31	383765,384667,384714,386272	No	No	No	bcc_50582|Cycle_0|Type_1	31,31	383765,386272	psi1:0.294117647059,psi2:0	C1_5,C2_0	C1_12,C2_0	Yes
ENSG00000198546,ENSG00000165828	ZNF511,PRAP1	chr10:135165587-135165779	+	altD	27	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	57,29	135165644,135165751	No	No	No	bcc_5055|Cycle_0|Type_1	30,29	135165617,135165751	psi1:0,psi2:0.873015873016	C1_0,C2_55	C1_0,C2_8	Yes
ENSG00000198546,ENSG00000165828	ZNF511,PRAP1	chr10:135164906-135165541	+	altA	3	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	31,34	135164937,135165508	No	No	No	bcc_5054|Cycle_0|Type_1	31,31	135164937,135165511	psi1:0,psi2:0.152173913043	C1_0,C2_7	C1_0,C2_39	Yes
ENSG00000088926	F11	chr4:187206937-187208866	+	ES	96	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,96,29	187206967,187207569,187207664,187208838	No	No	No	bcc_5041|Cycle_0|Type_1	30,29	187206967,187208838	psi1:0,psi2:0.964169381107	C1_0,C2_296	C1_0,C2_11	Yes
ENSG00000088926	F11	chr4:187201508-187201658	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):187201539,187201628	31,34	187201539,187201625	No	No	No	bcc_5040|Cycle_0|Type_1	31,31	187201539,187201628	psi1:0,psi2:0.263736263736	C1_0,C2_24	C1_0,C2_67	(GT:187201539,AG:187201628);(GT:187201539,TG:187201625)
ENSG00000088926	F11	chr4:187195398-187201195	+	ES_MULTI	270	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,110,160,30	187195429,187196941,187197050,187197385,187197544,187201166	No	No	No	bcc_5039|Cycle_1|Type_1	31,30	187195429,187201166	psi1:0,psi2:0.90625	C1_0,C2_145	C1_0,C2_15	Yes
ENSG00000115808	STRN	chr2:37126753-37129756	-	altA	17	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):37126801,37129727	48,30	37126801,37129727	No	No	No	bcc_49714|Cycle_0|Type_1	31,30	37126784,37129727	psi1:0.875,psi2:0	C1_14,C2_0	C1_2,C2_0	Yes
ENSG00000153086	ACMSD	chr2:135596278-135601959	+	altA	3	No	-	protein_coding	1_ss_annotated_(over_3_ss):135596309	31,31	135596309,135601929	No	Yes	No	bcc_49448|Cycle_2|Type_1	31,28	135596309,135601932	psi1:0,psi2:0.615384615385	C1_0,C2_16	C1_0,C2_10	Yes
ENSG00000153086	ACMSD	chr2:135596278-135602829	+	ES	110	Yes	Yes	protein_coding	3_ss_annotated_(over_4_ss):135602041,135602803,135596309	31,110,27	135596309,135601932,135602041,135602803	No	Yes	No	bcc_49448|Cycle_1|Type_1	31,27	135596309,135602803	psi1:0,psi2:0.677777777778	C1_0,C2_61	C1_0,C2_29	Yes
ENSG00000153086	ACMSD	chr2:135596279-135602829	+	ES	113	Yes	Yes	protein_coding	3_ss_annotated_(over_4_ss):135602803,135596309,135602041	30,113,27	135596309,135601929,135602041,135602803	No	Yes	No	bcc_49448|Cycle_0|Type_1	30,27	135596309,135602803	psi1:0,psi2:0.688172043011	C1_0,C2_64	C1_0,C2_29	Yes
ENSG00000153086	ACMSD	chr2:135616897-135620994	+	ES	50	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,50,30	135616927,135619539,135619588,135620965	No	No	No	bcc_49447|Cycle_0|Type_1	30,30	135616927,135620965	psi1:0,psi2:0.770992366412	C1_0,C2_101	C1_0,C2_30	Yes
ENSG00000138308	PLA2G12B	chr10:74695464-74700956	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):74695496,74700927	32,30	74695496,74700927	No	No	No	bcc_49426|Cycle_0|Type_1	29,30	74695493,74700927	psi1:0,psi2:0.526315789474	C1_0,C2_20	C1_0,C2_18	Yes
ENSG00000145730	PAM	chr5:102355517-102363914	+	ES	201	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,201,29	102355547,102360838,102361038,102363886	No	Yes	No	bcc_49320|Cycle_1|Type_1	30,29	102355547,102363886	psi1:0.875,psi2:0.875	C1_70,C2_14	C1_10,C2_2	(GT:102355547,AG:102363886);(GT:102355547,AG:102360838);(GC:102361038,AG:102363886)
ENSG00000182901	RGS7	chr1:240939484-240966232	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,81,29	240939513,240963941,240964021,240966204	No	No	No	bcc_49191|Cycle_0|Type_1	29,29	240939513,240966204	psi1:0.703703703704,psi2:0	C1_38,C2_0	C1_16,C2_0	Yes
PUTATIVE_ENSG00000171564	PUTATIVE_ENSG00000171564	chr4:155491946-155492005	+	deletion	3	No	-	-	no_known_ss	59	155491946	No	No	No	bcc_49183|Cycle_0|Type_1	27,29	155491973,155491977	psi1:0,psi2:0.833333333333	C1_0,C2_10	C1_0,C2_2	-
ENSG00000140600	SH3GL3	chr15:84228042-84286863	+	ES_MULTI	914	Yes	Yes	protein_coding	all_splice_sites_known_(16_ss)	31,73,137,134,159,104,110,197,30	84228073,84233886,84233958,84237288,84237424,84241317,84241450,84245335,84245493,84255735,84255838,84257414,84257523,84278022,84278218,84286834	No	Yes	No	bcc_49166|Cycle_5|Type_1	31,30	84228073,84286834	psi1:0.993902439024,psi2:0	C1_489,C2_0	C1_3,C2_0	Yes
ENSG00000140600	SH3GL3	chr15:84228042-84286863	+	ES_MULTI	921	No	Yes	protein_coding	all_splice_sites_known_(16_ss)	31,73,144,134,159,104,110,197,30	84228073,84233886,84233958,84237281,84237424,84241317,84241450,84245335,84245493,84255735,84255838,84257414,84257523,84278022,84278218,84286834	No	Yes	No	bcc_49166|Cycle_4|Type_1	31,30	84228073,84286834	psi1:0.994094488189,psi2:0	C1_505,C2_0	C1_3,C2_0	Yes
ENSG00000140600	SH3GL3	chr15:84228042-84286863	+	ES_MULTI	717	No	Yes	protein_coding	all_splice_sites_known_(14_ss)	31,73,137,134,159,104,110,30	84228073,84233886,84233958,84237288,84237424,84241317,84241450,84245335,84245493,84255735,84255838,84257414,84257523,84286834	No	Yes	No	bcc_49166|Cycle_3|Type_1	31,30	84228073,84286834	psi1:0.994186046512,psi2:0	C1_513,C2_0	C1_3,C2_0	Yes
ENSG00000140600	SH3GL3	chr15:84228042-84286863	+	ES_MULTI	724	Yes	Yes	protein_coding	all_splice_sites_known_(14_ss)	31,73,144,134,159,104,110,30	84228073,84233886,84233958,84237281,84237424,84241317,84241450,84245335,84245493,84255735,84255838,84257414,84257523,84286834	No	Yes	No	bcc_49166|Cycle_2|Type_1	31,30	84228073,84286834	psi1:0.994360902256,psi2:0	C1_529,C2_0	C1_3,C2_0	Yes
ENSG00000140600	SH3GL3	chr15:84233927-84237315	+	altA	7	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,35	84233958,84237281	No	Yes	No	bcc_49166|Cycle_1|Type_1	31,28	84233958,84237288	psi1:0.727272727273,psi2:0	C1_48,C2_0	C1_18,C2_0	Yes
ENSG00000140600	SH3GL3	chr15:84257492-84286861	+	ES	197	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,197,28	84257523,84278022,84278218,84286834	No	Yes	No	bcc_49166|Cycle_11|Type_1	31,28	84257523,84286834	psi1:0.178571428571,psi2:0	C1_10,C2_0	C1_46,C2_0	Yes
ENSG00000198513	ATL1	chr14:51095150-51098975	+	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,15,29	51095180,51096713,51096727,51098947	No	No	No	bcc_49071|Cycle_0|Type_1	30,29	51095180,51098947	psi1:0.954128440367,psi2:0	C1_104,C2_0	C1_5,C2_0	Yes
ENSG00000113492	AGXT2	chr5:35026584-35033593	-	ES	94	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,94,29	35026615,35032837,35032930,35033565	No	No	No	bcc_48929|Cycle_1|Type_1	31,29	35026615,35033565	psi1:0,psi2:0.985915492958	C1_0,C2_70	C1_0,C2_1	Yes
ENSG00000113492	AGXT2	chr5:35040734-35047940	-	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):35040768,35047910	34,31	35040768,35047910	No	No	No	bcc_48924|Cycle_0|Type_1	31,31	35040765,35047910	psi1:0,psi2:0.724137931034	C1_0,C2_21	C1_0,C2_8	Yes
ENSG00000155886	SLC24A2	chr9:19576993-19619612	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,51,31	19577020,19597227,19597277,19619582	No	No	No	bcc_48671|Cycle_0|Type_1	27,31	19577020,19619582	psi1:0.473684210526,psi2:0	C1_9,C2_0	C1_10,C2_0	Yes
ENSG00000232667	AC004862.6	chr7:80001580-80003685	-	ES	179	Yes	-	antisense	all_splice_sites_known_(4_ss)	30,179,29	80001610,80003128,80003306,80003657	No	No	No	bcc_48596|Cycle_0|Type_1	30,29	80001610,80003657	psi1:0,psi2:0.85	C1_0,C2_17	C1_0,C2_3	Yes
ENSG00000266086	RP11-159D12.5	chr17:56066597-56067040	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,31	56066630,56067010	No	No	No	bcc_48531|Cycle_0|Type_1	30,31	56066627,56067010	psi1:0.789473684211,psi2:0	C1_15,C2_0	C1_4,C2_0	Yes
ENSG00000231721	LINC-PINT	chr7:130630564-130668842	-	ES	21	No	-	antisense	2_ss_annotated_(over_4_ss):130630594,130668812	30,21,31	130630594,130663267,130663287,130668812	No	No	No	bcc_48317|Cycle_0|Type_1	30,31	130630594,130668812	psi1:0.171428571429,psi2:0	C1_6,C2_0	C1_29,C2_0	Yes
ENSG00000153317	ASAP1	chr8:131172180-131179812	-	ES	9	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,9,31	131172210,131173031,131173039,131179782	No	No	No	bcc_48238|Cycle_2|Type_1	30,31	131172210,131179782	psi1:0.714285714286,psi2:0	C1_5,C2_0	C1_2,C2_0	Yes
ENSG00000109846	CRYAB	chr11:111782617-111783893	-	altD	34	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	29,65	111782646,111783829	No	No	No	bcc_48209|Cycle_0|Type_1	29,31	111782646,111783863	psi1:0.775862068966,psi2:0	C1_45,C2_0	C1_13,C2_0	Yes
ENSG00000168297	PXK	chr3:58398659-58406294	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	58398690,58406263	No	Yes	No	bcc_47691|Cycle_0|Type_1	31,29	58398690,58406266	psi1:0.586206896552,psi2:0	C1_17,C2_0	C1_12,C2_0	Yes
ENSG00000168297	PXK	chr3:58395855-58398658	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	58395886,58398628	No	No	No	bcc_47690|Cycle_0|Type_1	31,28	58395886,58398631	psi1:0.772727272727,psi2:0	C1_34,C2_0	C1_10,C2_0	Yes
ENSG00000156219	ART3	chr4:77022141-77033567	+	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,33,29	77022172,77025090,77025122,77033539	No	No	No	bcc_47663|Cycle_0|Type_1	31,29	77022172,77033539	psi1:0.857142857143,psi2:0	C1_18,C2_0	C1_3,C2_0	Yes
ENSG00000105290	APLP1	chr19:36368696-36369491	+	unclassified	3	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,27,6	36368727,36368984,36369010,36369486	No	No	No	bcc_47512|Cycle_1|Type_1	31,24,6	36368727,36368987,36369010,36369486	psi1:0.252525252525,psi2:0	C1_50,C2_0	C1_148,C2_0	Yes
ENSG00000109956	B3GAT1	chr11:134257558-134257766	-	altD	17	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	30,46	134257588,134257721	No	No	No	bcc_47445|Cycle_0|Type_1	30,29	134257588,134257738	psi1:0.272727272727,psi2:0	C1_3,C2_0	C1_8,C2_0	Yes
ENSG00000212643	ZRSR1	chr5:112227748-112227813	+	deletion	3	No	Yes	protein_coding	no_known_ss	65	112227748	No	No	No	bcc_47411|Cycle_0|Type_1	31,31	112227779,112227783	psi1:0.8,psi2:0	C1_12,C2_0	C1_3,C2_0	-
ENSG00000132563	REEP2	chr5:137780527-137780951	+	altA	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,35	137780556,137780917	No	No	No	bcc_47390|Cycle_0|Type_1	29,29	137780556,137780923	psi1:0.89552238806,psi2:0	C1_60,C2_0	C1_7,C2_0	Yes
ENSG00000197959	DNM3	chr1:172277949-172348187	+	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,12,30	172277979,172292469,172292480,172348158	No	No	No	bcc_47297|Cycle_0|Type_1	30,30	172277979,172348158	psi1:0.854166666667,psi2:0	C1_41,C2_0	C1_7,C2_0	Yes
ENSG00000106976	DNM1	chr9:131012580-131013030	+	altD	26	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):131012635,131013004	55,27	131012635,131013004	No	No	No	bcc_47285|Cycle_0|Type_1	29,27	131012609,131013004	psi1:0.818181818182,psi2:0	C1_27,C2_0	C1_6,C2_0	Yes
ENSG00000163069	SGCB	chr4:52895998-52899627	-	ES	97	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,97,31	52896029,52898031,52898127,52899597	No	No	No	bcc_47209|Cycle_1|Type_1	31,31	52896029,52899597	psi1:0.291666666667,psi2:0	C1_14,C2_0	C1_34,C2_0	Yes
ENSG00000113578	FGF1	chr5:141975020-141993554	-	ES	104	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,104,31	141975049,141980267,141980370,141993524	No	No	No	bcc_47178|Cycle_0|Type_1	29,31	141975049,141993524	psi1:0.877551020408,psi2:0	C1_43,C2_0	C1_6,C2_0	Yes
ENSG00000135298	BAI3	chr6:70034883-70040428	+	ES	70	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,70,31	70034914,70037712,70037781,70040398	No	No	No	bcc_47036|Cycle_0|Type_1	31,31	70034914,70040398	psi1:0.9,psi2:0	C1_18,C2_0	C1_2,C2_0	Yes
ENSG00000272762,ENSG00000254782,ENSG00000114779	RP11-155D18.14,RP11-155D18.12,ABHD14B	chr3:52004173-52008010	-	ES	239	Yes	-	protein_coding,processed_transcript,protein_coding	all_splice_sites_known_(4_ss)	27,239,30	52004200,52005476,52005714,52007981	No	No	No	bcc_46960|Cycle_0|Type_1	27,30	52004200,52007981	psi1:0,psi2:0.957446808511	C1_0,C2_45	C1_0,C2_2	Yes
ENSG00000187048	CYP4A11	chr1:47400204-47401225	-	ES	155	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,155,31	47400231,47400672,47400826,47401195	No	Yes	No	bcc_46603|Cycle_3|Type_1	27,31	47400231,47401195	psi1:0,psi2:0.914893617021	C1_0,C2_172	C1_0,C2_16	Yes
ENSG00000187048	CYP4A11	chr1:47398478-47400154	-	ES_MULTI	251	Yes	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,65,186,30	47398509,47398655,47398719,47399618,47399803,47400125	No	Yes	No	bcc_46602|Cycle_2|Type_1	31,30	47398509,47400125	psi1:0,psi2:0.964285714286	C1_0,C2_243	C1_0,C2_9	Yes
ENSG00000187048	CYP4A11	chr1:47398478-47400155	-	ES_MULTI	390	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,65,134,191,31	47398509,47398655,47398719,47399618,47399751,47399848,47400038,47400125	No	Yes	No	bcc_46602|Cycle_1|Type_1	31,31	47398509,47400125	psi1:0,psi2:0.975476839237	C1_0,C2_358	C1_0,C2_9	Yes
ENSG00000158560	DYNC1I1	chr7:95442618-95499224	+	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,60,30	95442649,95457369,95457428,95499195	No	No	No	bcc_46463|Cycle_1|Type_1	31,30	95442649,95499195	psi1:0.933333333333,psi2:0	C1_42,C2_0	C1_3,C2_0	Yes
ENSG00000109794	FAM149A	chr4:187070407-187070776	+	altA	27	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,57	187070437,187070720	No	No	No	bcc_46383|Cycle_0|Type_1	30,30	187070437,187070747	psi1:0.6,psi2:0.6	C1_3,C2_9	C1_2,C2_6	Yes
ENSG00000121653	MAPK8IP1	chr11:45924707-45924946	-	IR	180	No	Yes	protein_coding	no_known_ss	239	-	No	No	No	bcc_46246|Cycle_0|Type_1	28,31	45924735,45924916	psi1:0.246376811594,psi2:0	C1_17,C2_0	C1_52,C2_0	(AG:45924916,GT:45924735)
ENSG00000185774	KCNIP4	chr4:20736330-20760474	-	ES	71	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,71,31	20736358,20751285,20751355,20760444	No	No	No	bcc_46203|Cycle_0|Type_1	28,31	20736358,20760444	psi1:0.953125,psi2:0	C1_61,C2_0	C1_3,C2_0	Yes
PUTATIVE_ENSG00000161013	PUTATIVE_ENSG00000161013	chr5:179228361-179228424	-	deletion	3	No	Yes	-	no_known_ss	63	179228361	No	No	No	bcc_46138|Cycle_0|Type_1	29,31	179228390,179228394	psi1:0,psi2:0.875	C1_0,C2_28	C1_0,C2_4	-
ENSG00000164188	RANBP3L	chr5:36265612-36270082	-	unclassified	60	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):36269569,36269492,36270053,36265622	10,78,30	36265622,36269492,36269569,36270053	No	No	No	bcc_45931|Cycle_0|Type_1	10,18,30	36265622,36269492,36269509,36270053	psi1:0.892857142857,psi2:0	C1_25,C2_0	C1_3,C2_0	Yes
ENSG00000132321	IQCA1	chr2:237289248-237300647	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,29	237289279,237300619	No	No	No	bcc_45857|Cycle_0|Type_1	28,29	237289276,237300619	psi1:0.4,psi2:0	C1_6,C2_0	C1_9,C2_0	Yes
ENSG00000135976	ANKRD36	chr2:97884952-97890573	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	97884983,97890543	No	No	No	bcc_45621|Cycle_0|Type_1	31,28	97884983,97890546	psi1:0.777777777778,psi2:0	C1_7,C2_0	C1_2,C2_0	Yes
ENSG00000254870,ENSG00000213760	ATP6V1G2-DDX39B,ATP6V1G2	chr6:31513956-31514438	-	altD	154	Yes	Yes	protein_coding,protein_coding	all_splice_sites_known_(3_ss)	30,184	31513986,31514255	No	No	No	bcc_45364|Cycle_0|Type_1	30,30	31513986,31514409	psi1:0.9375,psi2:0	C1_90,C2_0	C1_6,C2_0	Yes
ENSG00000104723	TUSC3	chr8:15605943-15621740	+	ES	65	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,65,29	15605974,15615300,15615364,15621712	No	No	No	bcc_45349|Cycle_0|Type_1	31,29	15605974,15621712	psi1:0.662337662338,psi2:0	C1_51,C2_0	C1_26,C2_0	(GC:15615364,AG:15621712);(GT:15605974,AG:15621712);(GT:15605974,AG:15615300)
ENSG00000101981	F9	chrX:138623317-138633249	+	ES	129	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,129,29	138623348,138630522,138630650,138633221	No	No	No	bcc_45284|Cycle_0|Type_1	31,29	138623348,138633221	psi1:0,psi2:0.938566552901	C1_0,C2_550	C1_0,C2_36	Yes
ENSG00000156504	FAM122B	chrX:133923265-133927874	-	altD	12	No	-	protein_coding	2_ss_annotated_(over_3_ss):133923296,133927845	31,42	133923296,133927833	No	No	No	bcc_45185|Cycle_0|Type_1	31,30	133923296,133927845	psi1:0.4,psi2:0	C1_4,C2_0	C1_6,C2_0	Yes
ENSG00000166840	GLYATL1	chr11:58707092-58711044	+	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,45,29	58707123,58710013,58710057,58711016	No	No	No	bcc_45149|Cycle_0|Type_1	31,29	58707123,58711016	psi1:0,psi2:0.161764705882	C1_0,C2_22	C1_0,C2_114	Yes
ENSG00000166348	USP54	chr10:75335403-75335585	-	altD	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	30,33	75335433,75335553	No	Yes	No	bcc_44637|Cycle_0|Type_1	30,30	75335433,75335556	psi1:0.368421052632,psi2:0	C1_7,C2_0	C1_12,C2_0	Yes
ENSG00000149124	GLYAT	chr11:58477610-58478093	+	IR	421	Yes	Yes	protein_coding	no_known_ss	483	-	No	No	No	bcc_44555|Cycle_0|Type_1	31,31	58477641,58478063	psi1:0,psi2:0.651282051282	C1_0,C2_127	C1_0,C2_68	(CT:58477641,AC:58478063)
ENSG00000039537	C6	chr5:41159324-41160274	-	ES	57	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):41159355,41160244	31,57,31	41159355,41159504,41159560,41160244	No	No	No	bcc_44443|Cycle_0|Type_1	31,31	41159355,41160244	psi1:0,psi2:0.0346534653465	C1_0,C2_7	C1_0,C2_195	Yes
ENSG00000039537	C6	chr5:41186280-41203220	-	ES_MULTI	444	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	30,142,145,157,31	41186310,41195894,41196035,41199870,41200014,41201660,41201816,41203190	No	Yes	Yes	bcc_44442|Cycle_3|Type_1	30,31	41186310,41203190	psi1:0,psi2:0.993103448276	C1_0,C2_576	C1_0,C2_4	Yes
ENSG00000039537	C6	chr5:41203322-41213508	-	ES	161	Yes	-	protein_coding	3_ss_annotated_(over_4_ss):41203352,41203680,41213478	30,161,31	41203352,41203680,41203840,41213478	No	Yes	Yes	bcc_44441|Cycle_7|Type_1	30,31	41203352,41213478	psi1:0,psi2:0.289855072464	C1_0,C2_20	C1_0,C2_49	Yes
ENSG00000039537	C6	chr5:41203322-41213507	-	ES	138	No	-	protein_coding	3_ss_annotated_(over_4_ss):41203352,41203680,41213478	30,138,30	41203352,41203680,41203817,41213478	No	Yes	Yes	bcc_44441|Cycle_22|Type_1	30,30	41203352,41213478	psi1:0,psi2:0.222222222222	C1_0,C2_14	C1_0,C2_49	Yes
ENSG00000039537	C6	chr5:41203322-41213508	-	ES	157	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	30,157,31	41203352,41203680,41203836,41213478	No	Yes	Yes	bcc_44441|Cycle_17|Type_1	30,31	41203352,41213478	psi1:0,psi2:0.246153846154	C1_0,C2_16	C1_0,C2_49	Yes
ENSG00000039537	C6	chr5:41203788-41213508	-	altA	23	Yes	-	protein_coding	1_ss_annotated_(over_3_ss):41213478	52,31	41203840,41213478	No	Yes	No	bcc_44441|Cycle_14|Type_1	29,31	41203817,41213478	psi1:0,psi2:0.6	C1_0,C2_6	C1_0,C2_4	Yes
ENSG00000039537	C6	chr5:41203788-41213508	-	altA	19	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):41203836,41213478	48,31	41203836,41213478	No	Yes	No	bcc_44441|Cycle_13|Type_1	29,31	41203817,41213478	psi1:0,psi2:0.333333333333	C1_0,C2_2	C1_0,C2_4	Yes
ENSG00000180739	S1PR5	chr19:10623980-10624043	+	deletion	3	No	-	protein_coding	no_known_ss	63	10623980	No	No	No	bcc_44002|Cycle_0|Type_1	29,31	10624009,10624013	psi1:0.615384615385,psi2:0	C1_16,C2_0	C1_10,C2_0	-
ENSG00000175866	BAIAP2	chr17:79084016-79084086	-	deletion	8	Yes	-	protein_coding	no_known_ss	70	79084016	No	No	No	bcc_43994|Cycle_0|Type_1	31,31	79084047,79084056	psi1:0.75,psi2:0	C1_9,C2_0	C1_3,C2_0	-
ENSG00000174827	PDZK1	chr1:145760758-145761238	+	altA	32	Yes	Yes	protein_coding	1_ss_annotated_(over_3_ss):145761178	31,61	145760789,145761178	Yes	Yes	No	bcc_43945|Cycle_2|Type_1	31,29	145760789,145761210	psi1:0,psi2:0.826086956522	C1_0,C2_19	C1_0,C2_4	Yes
ENSG00000215859,ENSG00000244211	RP6-74O6.2,PDZK1P2	chr1:147468918-147469394	-	altA	32	Yes	-	lincRNA,pseudogene	1_ss_annotated_(over_3_ss):147468979	61,31	147468979,147469364	Yes	Yes	No	bcc_43945|Cycle_2|Type_1	29,31	147468947,147469364	psi1:0,psi2:0.826086956522	C1_0,C2_19	C1_0,C2_4	Yes
ENSG00000215860	PDZK1P1	chr1:145927212-145927688	-	altA	32	Yes	-	pseudogene	1_ss_annotated_(over_3_ss):145927273	61,31	145927273,145927658	Yes	Yes	No	bcc_43945|Cycle_2|Type_1	29,31	145927241,145927658	psi1:0,psi2:0.826086956522	C1_0,C2_19	C1_0,C2_4	Yes
ENSG00000060566	CREB3L3	chr19:4154993-4157022	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	4155024,4156992	No	No	No	bcc_43927|Cycle_0|Type_1	31,28	4155024,4156995	psi1:0,psi2:0.539325842697	C1_0,C2_48	C1_0,C2_41	Yes
ENSG00000085433	WDR47	chr1:109525373-109525934	-	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):109525904,109525401	34,31	109525407,109525904	No	No	No	bcc_43873|Cycle_0|Type_1	28,31	109525401,109525904	psi1:0.172413793103,psi2:0	C1_10,C2_0	C1_48,C2_0	(AC:109525904,CT:109525401);(AC:109525904,CA:109525407)
ENSG00000147647	DPYS	chr8:105405191-105436505	-	ES	108	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):105436475,105405219	28,108,31	105405219,105436177,105436284,105436475	No	No	No	bcc_43863|Cycle_0|Type_1	28,31	105405219,105436475	psi1:0,psi2:0.173410404624	C1_0,C2_30	C1_0,C2_143	Yes
ENSG00000147647	DPYS	chr8:105459702-105478914	-	ES	159	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,159,30	105459731,105463474,105463632,105478885	No	No	No	bcc_43862|Cycle_0|Type_1	29,30	105459731,105478885	psi1:0,psi2:0.973509933775	C1_0,C2_147	C1_0,C2_4	Yes
ENSG00000163536	SERPINI1	chr3:167453581-167506927	+	altD	312	No	-	protein_coding	all_splice_sites_known_(3_ss)	342,29	167453923,167506899	No	Yes	No	bcc_43648|Cycle_0|Type_1	30,29	167453611,167506899	psi1:0.86301369863,psi2:0	C1_126,C2_0	C1_20,C2_0	Yes
ENSG00000065609	SNAP91	chr6:84290274-84291971	-	altA	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	44,31	84290318,84291941	No	No	No	bcc_43581|Cycle_0|Type_1	29,31	84290303,84291941	psi1:0.814285714286,psi2:0	C1_57,C2_0	C1_13,C2_0	Yes
ENSG00000269707	RP11-13J10.1	chr2:105470913-105471052	+	IR	81	No	-	sense_overlapping	no_known_ss	139	-	No	No	No	bcc_43321|Cycle_0|Type_1	30,28	105470943,105471025	psi1:0.818181818182,psi2:0	C1_27,C2_0	C1_6,C2_0	Yes
ENSG00000117143	UAP1	chr1:162560270-162562554	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	162560301,162562522	No	Yes	No	bcc_4305|Cycle_3|Type_1	31,30	162560301,162562525	psi1:0,psi2:0.80487804878	C1_0,C2_66	C1_0,C2_16	Yes
ENSG00000075711	DLG1	chr3:196793594-196802738	-	ES_MULTI	78	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,36,42,31	196793625,196795373,196795408,196796090,196796131,196802708	No	Yes	No	bcc_42915|Cycle_2|Type_1	31,31	196793625,196802708	psi1:0.854838709677,psi2:0	C1_53,C2_0	C1_9,C2_0	Yes
ENSG00000154917	RAB6B	chr3:133546161-133546274	-	IR	53	Yes	-	protein_coding	no_known_ss	113	-	No	No	No	bcc_42548|Cycle_0|Type_1	29,31	133546190,133546244	psi1:0.926829268293,psi2:0	C1_38,C2_0	C1_3,C2_0	(TT:133546244,TG:133546190)
ENSG00000171307	ZDHHC16	chr10:99212229-99213402	+	ES_altA	117	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,29,116	99212260,99212652,99212680,99213287	No	Yes	No	bcc_42497|Cycle_1|Type_1	31,28	99212260,99213375	psi1:0,psi2:0.911764705882	C1_0,C2_31	C1_0,C2_3	Yes
ENSG00000153820	SPHKAP	chr2:228845728-228845788	-	deletion	3	No	-	protein_coding	no_known_ss	60	228845728	No	No	No	bcc_41834|Cycle_0|Type_1	26,31	228845754,228845758	psi1:0.583333333333,psi2:0	C1_14,C2_0	C1_10,C2_0	-
ENSG00000136854	STXBP1	chr9:130444809-130453084	+	ES	126	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,126,31	130444839,130446647,130446772,130453054	No	No	No	bcc_41687|Cycle_0|Type_1	30,31	130444839,130453054	psi1:0.589887640449,psi2:0	C1_105,C2_0	C1_73,C2_0	Yes
ENSG00000196104	SPOCK3	chr4:167983657-168155164	-	ES	9	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,9,29	167983688,168004389,168004397,168155136	No	No	No	bcc_41374|Cycle_0|Type_1	31,29	167983688,168155136	psi1:0.184210526316,psi2:0	C1_14,C2_0	C1_62,C2_0	Yes
ENSG00000262621	NAA60	chr16:3493796-3498501	+	altD	10	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	41,31	3493837,3498471	No	No	No	bcc_4122|Cycle_0|Type_1	31,31	3493827,3498471	psi1:0.333333333333,psi2:0	C1_2,C2_0	C1_4,C2_0	Yes
ENSG00000109881	CCDC34	chr11:27363066-27378980	-	ES	108	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,108,31	27363097,27371879,27371986,27378950	No	No	No	bcc_41214|Cycle_0|Type_1	31,31	27363097,27378950	psi1:0.833333333333,psi2:0	C1_15,C2_0	C1_3,C2_0	Yes
ENSG00000163631	ALB	chr4:74281991-74282051	-	deletion	3	No	Yes	protein_coding	no_known_ss	60	74281991	No	No	No	bcc_41097|Cycle_1|Type_1	27,30	74282018,74282022	psi1:0,psi2:0.738095238095	C1_0,C2_31	C1_0,C2_11	-
ENSG00000106772	PRUNE2	chr9:79229485-79244138	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,36,31	79229516,79239939,79239974,79244108	No	No	No	bcc_41013|Cycle_0|Type_1	31,31	79229516,79244108	psi1:0.918918918919,psi2:0	C1_34,C2_0	C1_3,C2_0	Yes
ENSG00000106772	PRUNE2	chr9:79259795-79267428	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,30	79259828,79267399	No	No	No	bcc_41011|Cycle_0|Type_1	30,30	79259825,79267399	psi1:0.367346938776,psi2:0	C1_18,C2_0	C1_31,C2_0	Yes
ENSG00000079385	CEACAM1	chr19:43015041-43016532	-	ES	53	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,53,31	43015072,43015728,43015780,43016502	No	No	No	bcc_40819|Cycle_0|Type_1	31,31	43015072,43016502	psi1:0,psi2:0.243902439024	C1_0,C2_10	C1_0,C2_31	Yes
ENSG00000124406	ATP8A1	chr4:42558027-42576666	-	ES	45	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,45,31	42558057,42571178,42571222,42576636	No	No	No	bcc_40658|Cycle_0|Type_1	30,31	42558057,42576636	psi1:0.285714285714,psi2:0	C1_6,C2_0	C1_15,C2_0	Yes
ENSG00000151917	BEND6	chr6:56857322-56879961	+	ES	64	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,64,31	56857353,56879260,56879323,56879931	No	No	No	bcc_40562|Cycle_0|Type_1	31,31	56857353,56879931	psi1:0.393442622951,psi2:0	C1_24,C2_0	C1_37,C2_0	Yes
ENSG00000130294	KIF1A	chr2:241666327-241676509	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,27,30	241666357,241674136,241674162,241676480	No	Yes	No	bcc_40496|Cycle_1|Type_1	30,30	241666357,241676480	psi1:0.292857142857,psi2:0	C1_41,C2_0	C1_99,C2_0	Yes
ENSG00000130294	KIF1A	chr2:241666327-241676510	-	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,24,31	241666357,241667806,241667829,241676480	No	Yes	No	bcc_40496|Cycle_0|Type_1	30,31	241666357,241676480	psi1:0.0825688073394,psi2:0	C1_9,C2_0	C1_100,C2_0	Yes
ENSG00000130294	KIF1A	chr2:241710490-241712561	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,31	241710521,241711987,241712013,241712531	No	Yes	No	bcc_40492|Cycle_4|Type_1	31,31	241710521,241712531	psi1:0.3625,psi2:0	C1_29,C2_0	C1_51,C2_0	Yes
ENSG00000130294	KIF1A	chr2:241710490-241712561	-	ES_altA	102	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	106,27,31	241710596,241711987,241712013,241712531	No	Yes	No	bcc_40492|Cycle_2|Type_1	31,31	241710521,241712531	psi1:0.337662337662,psi2:0	C1_26,C2_0	C1_51,C2_0	Yes
ENSG00000130294	KIF1A	chr2:241710490-241712534	-	altA	75	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	106,27,4	241710596,241711987,241712013,241712531	No	Yes	No	bcc_40492|Cycle_0|Type_1	31,27,4	241710521,241711987,241712013,241712531	psi1:0.5,psi2:0	C1_22,C2_0	C1_22,C2_0	Yes
ENSG00000155093	PTPRN2	chr7:157332365-157332427	+	deletion	3	No	-	protein_coding	no_known_ss	62	157332365	No	No	No	bcc_40458|Cycle_0|Type_1	28,31	157332393,157332397	psi1:0.428571428571,psi2:0	C1_18,C2_0	C1_24,C2_0	-
ENSG00000114646	CSPG5	chr3:47604220-47610671	-	altD	81	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,111	47604251,47610561	No	No	No	bcc_40428|Cycle_0|Type_1	31,30	47604251,47610642	psi1:0.27027027027,psi2:0	C1_10,C2_0	C1_27,C2_0	Yes
ENSG00000162923	WDR26	chr1:224612331-224619257	-	altD	48	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	25,79	224612356,224619179	No	No	No	bcc_40379|Cycle_0|Type_1	25,31	224612356,224619227	psi1:0.666666666667,psi2:0.666666666667	C1_20,C2_6	C1_10,C2_3	Yes
ENSG00000023839	ABCC2	chr10:101604192-101605468	+	altA	59	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):101605381,101604222	30,88	101604222,101605381	No	No	No	bcc_40362|Cycle_0|Type_1	30,29	101604222,101605440	psi1:0,psi2:0.959459459459	C1_0,C2_71	C1_0,C2_3	Yes
ENSG00000082397	EPB41L3	chr18:5398113-5406804	-	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,75,29	5398142,5400968,5401042,5406776	No	Yes	No	bcc_40307|Cycle_0|Type_1	29,29	5398142,5406776	psi1:0.2,psi2:0	C1_11,C2_0	C1_44,C2_0	Yes
ENSG00000082397	EPB41L3	chr18:5406938-5410595	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,36,31	5406967,5407700,5407735,5410565	No	No	No	bcc_40306|Cycle_0|Type_1	29,31	5406967,5410565	psi1:0.857142857143,psi2:0	C1_36,C2_0	C1_6,C2_0	Yes
ENSG00000012504	NR1H4	chr12:100926346-100928698	+	altD	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	42,31	100926388,100928668	No	No	No	bcc_40082|Cycle_0|Type_1	30,31	100926376,100928668	psi1:0,psi2:0.76	C1_0,C2_38	C1_0,C2_12	Yes
ENSG00000091428	RAPGEF4	chr2:173782591-173825880	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	11,20,54,31	173782602,173787009,173787028,173825488,173825541,173825850	No	No	No	bcc_39912|Cycle_0|Type_1	11,20,31	173782602,173787009,173787028,173825850	psi1:0.6,psi2:0	C1_30,C2_0	C1_20,C2_0	Yes
ENSG00000130600	H19	chr11:2016991-2017136	-	altA	6	No	-	processed_transcript	all_splice_sites_known_(3_ss)	33,31	2017024,2017106	No	No	No	bcc_39081|Cycle_0|Type_1	27,31	2017018,2017106	psi1:0,psi2:0.87619047619	C1_0,C2_92	C1_0,C2_13	Yes
ENSG00000242265	PEG10	chr7:94285861-94292675	+	altD	11	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	42,30	94285903,94292646	No	No	No	bcc_38984|Cycle_0|Type_1	31,30	94285892,94292646	psi1:0.4,psi2:0	C1_4,C2_0	C1_6,C2_0	Yes
ENSG00000130779	CLIP1	chr12:122831995-122837303	-	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,33,31	122832026,122835658,122835690,122837273	No	No	No	bcc_38689|Cycle_0|Type_1	31,31	122832026,122837273	psi1:0.631578947368,psi2:0	C1_12,C2_0	C1_7,C2_0	Yes
ENSG00000171735	CAMTA1	chr1:7807810-7811287	+	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,21,29	7807841,7809831,7809851,7811259	No	No	No	bcc_38582|Cycle_0|Type_1	31,29	7807841,7811259	psi1:0.736842105263,psi2:0	C1_14,C2_0	C1_5,C2_0	Yes
ENSG00000088367	EPB41L1	chr20:34800267-34806827	+	ES	84	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,84,30	34800298,34802279,34802362,34806798	No	Yes	No	bcc_38526|Cycle_8|Type_1	31,30	34800298,34806798	psi1:0.7,psi2:0	C1_14,C2_0	C1_6,C2_0	Yes
ENSG00000088367	EPB41L1	chr20:34800267-34802309	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	34800298,34802279	No	Yes	No	bcc_38526|Cycle_4|Type_1	31,28	34800298,34802282	psi1:0.307692307692,psi2:0	C1_4,C2_0	C1_9,C2_0	Yes
ENSG00000088367	EPB41L1	chr20:34802331-34809815	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,87,30	34802362,34806798,34806884,34809786	No	Yes	No	bcc_38526|Cycle_2|Type_1	31,30	34802362,34809786	psi1:0.545454545455,psi2:0	C1_18,C2_0	C1_15,C2_0	Yes
ENSG00000088367	EPB41L1	chr20:34802331-34809816	+	ES_MULTI	171	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,87,84,31	34802362,34806798,34806884,34807683,34807766,34809786	No	Yes	No	bcc_38526|Cycle_1|Type_1	31,31	34802362,34809786	psi1:0.794520547945,psi2:0	C1_58,C2_0	C1_15,C2_0	Yes
ENSG00000088367	EPB41L1	chr20:34806854-34809816	+	ES	84	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,84,31	34806884,34807683,34807766,34809786	No	Yes	No	bcc_38526|Cycle_11|Type_1	30,31	34806884,34809786	psi1:0.944444444444,psi2:0	C1_51,C2_0	C1_3,C2_0	Yes
ENSG00000088367	EPB41L1	chr20:34800268-34806827	+	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,81,30	34800298,34802282,34802362,34806798	No	Yes	No	bcc_38526|Cycle_0|Type_1	30,30	34800298,34806798	psi1:0.75,psi2:0	C1_18,C2_0	C1_6,C2_0	Yes
ENSG00000135905	DOCK10	chr2:225642971-225651768	-	ES	6	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,6,30	225643001,225649454,225649459,225651739	No	No	No	bcc_38516|Cycle_0|Type_1	30,30	225643001,225651739	psi1:0.545454545455,psi2:0	C1_6,C2_0	C1_5,C2_0	Yes
ENSG00000166448	TMEM130	chr7:98445802-98446236	-	altA	36	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	65,31	98445867,98446206	No	No	No	bcc_3777|Cycle_0|Type_1	29,31	98445831,98446206	psi1:0.30303030303,psi2:0	C1_20,C2_0	C1_46,C2_0	Yes
ENSG00000143702	CEP170	chr1:243349343-243349591	+	IR	186	No	Yes	protein_coding	no_known_ss	248	-	No	Yes	No	bcc_37717|Cycle_2|Type_1	31,31	243349374,243349561	psi1:0.619047619048,psi2:0	C1_13,C2_0	C1_8,C2_0	(CT:243349374,AC:243349561)
ENSG00000155816	FMN2	chr1:240341338-240351535	+	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,12,29	240341368,240343469,240343480,240351507	No	No	No	bcc_37694|Cycle_0|Type_1	30,29	240341368,240351507	psi1:0.363636363636,psi2:0	C1_8,C2_0	C1_14,C2_0	Yes
ENSG00000072134	EPN2	chr17:19215428-19216464	+	altA	18	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,47	19215457,19216418	No	No	No	bcc_37644|Cycle_0|Type_1	29,29	19215457,19216436	psi1:0.947368421053,psi2:0	C1_18,C2_0	C1_1,C2_0	Yes
ENSG00000151690	MFSD6	chr2:191362414-191364769	+	ES	25	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,25,29	191362445,191364558,191364582,191364741	No	No	No	bcc_37631|Cycle_0|Type_1	31,29	191362445,191364741	psi1:0.53125,psi2:0	C1_17,C2_0	C1_15,C2_0	Yes
ENSG00000172995	ARPP21	chr3:35721421-35723232	+	ES	92	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,92,27	35721452,35722318,35722409,35723206	No	No	No	bcc_37583|Cycle_0|Type_1	31,27	35721452,35723206	psi1:0.3,psi2:0	C1_9,C2_0	C1_21,C2_0	Yes
ENSG00000172995	ARPP21	chr3:35721155-35721309	+	altD	9	No	-	protein_coding	all_splice_sites_known_(3_ss)	38,31	35721193,35721279	No	No	No	bcc_37582|Cycle_0|Type_1	29,31	35721184,35721279	psi1:0.625,psi2:0	C1_10,C2_0	C1_6,C2_0	Yes
ENSG00000079215	SLC1A3	chr5:36680660-36686197	+	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,135,31	36680691,36683966,36684100,36686167	No	No	No	bcc_37143|Cycle_0|Type_1	31,31	36680691,36686167	psi1:0.976608187135,psi2:0	C1_167,C2_0	C1_4,C2_0	Yes
ENSG00000112337	SLC17A2	chr6:25914868-25915994	-	ES	148	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,148,31	25914898,25915727,25915874,25915964	No	No	No	bcc_36820|Cycle_0|Type_1	30,31	25914898,25915964	psi1:0,psi2:0.918032786885	C1_0,C2_56	C1_0,C2_5	Yes
ENSG00000157470	FAM81A	chr15:59784559-59801090	+	ES	130	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,130,29	59784588,59799412,59799541,59801062	No	No	No	bcc_36711|Cycle_0|Type_1	29,29	59784588,59801062	psi1:0.958762886598,psi2:0	C1_93,C2_0	C1_4,C2_0	Yes
ENSG00000133083	DCLK1	chr13:36348805-36367533	-	ES	74	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,74,31	36348836,36362349,36362422,36367503	No	No	No	bcc_36573|Cycle_0|Type_1	31,31	36348836,36367503	psi1:0.608108108108,psi2:0	C1_45,C2_0	C1_29,C2_0	Yes
ENSG00000123838	C4BPA	chr1:207277744-207286374	+	altA	102	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,131	207277775,207286244	No	Yes	No	bcc_36012|Cycle_3|Type_1	31,29	207277775,207286346	psi1:0,psi2:0.416531604538	C1_0,C2_257	C1_0,C2_360	Yes
ENSG00000123838	C4BPA	chr1:207277744-207286374	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):207286346,207277775	31,32	207277775,207286343	No	Yes	No	bcc_36012|Cycle_1|Type_1	31,29	207277775,207286346	psi1:0,psi2:0.191011235955	C1_0,C2_85	C1_0,C2_360	Yes
ENSG00000123838	C4BPA	chr1:207277744-207286371	+	altA	99	No	-	protein_coding	2_ss_annotated_(over_3_ss):207286244,207277775	31,128	207277775,207286244	No	Yes	No	bcc_36012|Cycle_0|Type_1	31,29	207277775,207286343	psi1:0,psi2:0.776073619632	C1_0,C2_253	C1_0,C2_73	Yes
ENSG00000100024	UPB1	chr22:24916405-24919617	+	ES	43	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,43,31	24916436,24917954,24917996,24919587	No	No	No	bcc_35545|Cycle_0|Type_1	31,31	24916436,24919587	psi1:0,psi2:0.925373134328	C1_0,C2_62	C1_0,C2_5	Yes
ENSG00000143257	NR1I3	chr1:161200678-161200937	-	altA	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	45,31	161200723,161200907	No	No	No	bcc_35429|Cycle_0|Type_1	30,31	161200708,161200907	psi1:0,psi2:0.468085106383	C1_0,C2_22	C1_0,C2_25	Yes
ENSG00000143257	NR1I3	chr1:161202705-161205667	-	ES	170	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,170,31	161202736,161202959,161203128,161205637	No	No	No	bcc_35427|Cycle_0|Type_1	31,31	161202736,161205637	psi1:0,psi2:0.931818181818	C1_0,C2_41	C1_0,C2_3	Yes
ENSG00000142875	PRKACB	chr1:84630074-84644890	+	ES_MULTI	57	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	31,24,24,9,31	84630105,84639012,84639035,84640716,84640739,84641482,84641490,84644860	No	Yes	No	bcc_35408|Cycle_2|Type_1	31,31	84630105,84644860	psi1:0.658536585366,psi2:0	C1_27,C2_0	C1_14,C2_0	Yes
ENSG00000142875	PRKACB	chr1:84630074-84644890	+	ES_MULTI	48	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,24,24,31	84630105,84639012,84639035,84640716,84640739,84644860	No	Yes	No	bcc_35408|Cycle_1|Type_1	31,31	84630105,84644860	psi1:0.695652173913,psi2:0	C1_32,C2_0	C1_14,C2_0	Yes
ENSG00000142875	PRKACB	chr1:84639028-84644888	+	ES	9	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	7,24,9,29	84639035,84640716,84640739,84641482,84641490,84644860	No	Yes	No	bcc_35408|Cycle_0|Type_1	7,24,29	84639035,84640716,84640739,84644860	psi1:0.428571428571,psi2:0	C1_27,C2_0	C1_36,C2_0	Yes
ENSG00000142875	PRKACB	chr1:84668457-84670193	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,32	84668488,84670162	No	No	No	bcc_35407|Cycle_0|Type_1	31,29	84668488,84670165	psi1:0.391304347826,psi2:0	C1_9,C2_0	C1_14,C2_0	Yes
ENSG00000184999	SLC22A10	chr11:63067071-63078509	+	ES_MULTI	528	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	30,215,109,204,31	63067101,63069801,63070015,63071580,63071688,63072158,63072361,63078479	No	No	No	bcc_35397|Cycle_1|Type_1	30,31	63067101,63078479	psi1:0,psi2:0.833333333333	C1_0,C2_75	C1_0,C2_15	Yes
ENSG00000131437	KIF3A	chr5:132039289-132046681	-	ES	72	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	22,9,72,31	132039311,132042143,132042151,132044599,132044670,132046651	No	No	No	bcc_35214|Cycle_0|Type_1	22,9,31	132039311,132042143,132042151,132046651	psi1:0.636363636364,psi2:0	C1_35,C2_0	C1_20,C2_0	Yes
ENSG00000144290	SLC4A10	chr2:162833355-162839700	+	unclassified	22	Yes	Yes	protein_coding	4_ss_annotated_(over_5_ss):162834232,162839689,162833386,162834270	31,39,12	162833386,162834232,162834270,162839689	No	No	No	bcc_35180|Cycle_1|Type_1	31,17,12	162833386,162834254,162834270,162839689	psi1:0.971962616822,psi2:0	C1_104,C2_0	C1_3,C2_0	Yes
ENSG00000154162	CDH12	chr5:22754789-22757189	-	ES	71	Yes	-	protein_coding	no_known_ss	31,71,30	22754820,22755125,22755195,22757160	No	No	No	bcc_34932|Cycle_0|Type_1	31,30	22754820,22757160	psi1:0.62962962963,psi2:0	C1_17,C2_0	C1_10,C2_0	(AG:22757160,GT:22755195);(AG:22757160,GT:22754820);(AG:22755125,GT:22754820)
ENSG00000154608	CEP170P1	chr4:119459081-119461404	+	altD	81	No	-	pseudogene	all_splice_sites_known_(3_ss)	112,31	119459193,119461374	Yes	Yes	No	bcc_34845|Cycle_3|Type_1	31,31	119459112,119461374	psi1:0.857142857143,psi2:0	C1_30,C2_0	C1_5,C2_0	Yes
ENSG00000143702	CEP170	chr1:243303378-243305699	-	altD	81	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,112	243303409,243305588	Yes	Yes	No	bcc_34845|Cycle_3|Type_1	31,31	243303409,243305669	psi1:0.857142857143,psi2:0	C1_30,C2_0	C1_5,C2_0	Yes
ENSG00000163618	CADPS	chr3:62464061-62477044	-	ES	147	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,147,31	62464091,62467398,62467544,62477014	No	No	No	bcc_34817|Cycle_0|Type_1	30,31	62464091,62477014	psi1:0.736263736264,psi2:0	C1_67,C2_0	C1_24,C2_0	Yes
ENSG00000163618	CADPS	chr3:62478094-62484866	-	ES	9	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	27,9,30	62478121,62483821,62483829,62484837	No	Yes	No	bcc_34815|Cycle_1|Type_1	27,30	62478121,62484837	psi1:0.444444444444,psi2:0	C1_4,C2_0	C1_5,C2_0	Yes
ENSG00000163618	CADPS	chr3:62478090-62484867	-	ES	21	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,21,31	62478121,62479320,62479340,62484837	No	Yes	No	bcc_34815|Cycle_0|Type_1	31,31	62478121,62484837	psi1:0.739130434783,psi2:0	C1_17,C2_0	C1_6,C2_0	Yes
ENSG00000163618	CADPS	chr3:62484912-62499342	-	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,18,30	62484943,62498426,62498443,62499313	No	Yes	No	bcc_34814|Cycle_3|Type_1	31,30	62484943,62499313	psi1:0.5625,psi2:0	C1_9,C2_0	C1_7,C2_0	Yes
ENSG00000163618	CADPS	chr3:62484930-62501764	-	ES	69	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	13,18,69,31	62484943,62498426,62498443,62499313,62499381,62501734	No	Yes	No	bcc_34814|Cycle_0|Type_1	13,18,31	62484943,62498426,62498443,62501734	psi1:0.379310344828,psi2:0	C1_11,C2_0	C1_18,C2_0	Yes
ENSG00000113327	GABRG2	chr5:161576288-161580129	+	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,24,31	161576319,161578736,161578759,161580099	No	No	No	bcc_34381|Cycle_0|Type_1	31,31	161576319,161580099	psi1:0.803571428571,psi2:0	C1_45,C2_0	C1_11,C2_0	Yes
ENSG00000080822	CLDND1	chr3:98240517-98241722	-	altA	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	45,30	98240562,98241693	No	Yes	No	bcc_34239|Cycle_14|Type_1	30,30	98240547,98241693	psi1:0.4,psi2:0	C1_38,C2_0	C1_57,C2_0	Yes
ENSG00000108262	GIT1	chr17:27905768-27908386	-	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,27,31	27905797,27905980,27906006,27908356	No	No	No	bcc_33942|Cycle_0|Type_1	29,31	27905797,27908356	psi1:0.675,psi2:0	C1_27,C2_0	C1_13,C2_0	Yes
ENSG00000116106	EPHA4	chr2:222290831-222291213	-	altD	29	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,59	222290862,222291155	No	No	No	bcc_33887|Cycle_0|Type_1	31,30	222290862,222291184	psi1:0.2,psi2:0	C1_8,C2_0	C1_32,C2_0	Yes
-	unknown_gene	chr2:175664077-175664141	0	deletion	3	No	-	-	no_ss	64	175664077	No	No	No	bcc_33767|Cycle_2|Type_1	30,31	175664107,175664111	psi1:0.4,psi2:0	C1_4,C2_0	C1_6,C2_0	-
ENSG00000065809	FAM107B	chr10:14572488-14613953	-	altD	161	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	26,192	14572514,14613762	No	Yes	No	bcc_33718|Cycle_0|Type_1	26,31	14572514,14613923	psi1:0.878048780488,psi2:0	C1_36,C2_0	C1_5,C2_0	Yes
ENSG00000150471	LPHN3	chr4:62863952-62897184	+	ES	27	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,27,25	62863983,62894573,62894599,62897160	No	No	No	bcc_33502|Cycle_2|Type_1	31,25	62863983,62897160	psi1:0.5,psi2:0	C1_10,C2_0	C1_10,C2_0	Yes
ENSG00000167798	C3P1	chr19:10169753-10172514	+	altD	13	Yes	-	pseudogene	2_ss_annotated_(over_3_ss):10169784,10172485	44,30	10169797,10172485	No	No	No	bcc_3345|Cycle_0|Type_1	31,30	10169784,10172485	psi1:0,psi2:0.789473684211	C1_0,C2_15	C1_0,C2_4	Yes
ENSG00000167798	C3P1	chr19:10165968-10169273	+	ES	169	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	30,169,30	10165998,10166269,10166437,10169244	No	No	No	bcc_3344|Cycle_0|Type_1	30,30	10165998,10169244	psi1:0,psi2:0.65625	C1_0,C2_21	C1_0,C2_11	Yes
ENSG00000167798	C3P1	chr19:10182172-10183629	+	altD	163	Yes	-	pseudogene	1_ss_annotated_(over_3_ss):10183600	193,30	10182365,10183600	No	No	No	bcc_3339|Cycle_0|Type_1	30,30	10182202,10183600	psi1:0,psi2:0.339534883721	C1_0,C2_73	C1_0,C2_142	Yes
ENSG00000187824	TMEM220	chr17:10629551-10633125	-	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,30,29	10629581,10632348,10632377,10633097	No	No	No	bcc_32791|Cycle_0|Type_1	30,29	10629581,10633097	psi1:0,psi2:0.774193548387	C1_0,C2_24	C1_0,C2_7	Yes
ENSG00000139220	PPFIA2	chr12:81653408-81657040	-	ES	92	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,92,31	81653439,81655728,81655819,81657010	No	No	No	bcc_32786|Cycle_0|Type_1	31,31	81653439,81657010	psi1:0.627906976744,psi2:0	C1_27,C2_0	C1_16,C2_0	Yes
ENSG00000139220	PPFIA2	chr12:81676788-81688644	-	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,63,31	81676818,81678020,81678082,81688614	No	Yes	No	bcc_32785|Cycle_4|Type_1	30,31	81676818,81688614	psi1:0.68,psi2:0	C1_17,C2_0	C1_8,C2_0	Yes
ENSG00000139220	PPFIA2	chr12:81675198-81688644	-	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,30,31	81675229,81676789,81676818,81688614	No	Yes	No	bcc_32785|Cycle_1|Type_1	31,31	81675229,81688614	psi1:0.736842105263,psi2:0	C1_14,C2_0	C1_5,C2_0	Yes
ENSG00000139220	PPFIA2	chr12:81675198-81688644	-	ES_MULTI	93	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,30,63,31	81675229,81676789,81676818,81678020,81678082,81688614	No	Yes	No	bcc_32785|Cycle_0|Type_1	31,31	81675229,81688614	psi1:0.791666666667,psi2:0	C1_19,C2_0	C1_5,C2_0	Yes
ENSG00000139220	PPFIA2	chr12:81799653-81839365	-	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,75,31	81799682,81833751,81833825,81839335	No	No	No	bcc_32783|Cycle_0|Type_1	29,31	81799682,81839335	psi1:0.928571428571,psi2:0	C1_13,C2_0	C1_1,C2_0	Yes
ENSG00000154027	AK5	chr1:77752781-77759579	+	altA	72	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,102	77752812,77759478	No	Yes	Yes	bcc_32684|Cycle_5|Type_1	31,30	77752812,77759550	psi1:0.898395721925,psi2:0	C1_168,C2_0	C1_19,C2_0	Yes
ENSG00000018189	RUFY3	chr4:71588438-71628262	+	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,54,27	71588468,71607344,71607397,71628236	No	No	No	bcc_32366|Cycle_0|Type_1	30,27	71588468,71628236	psi1:0.107692307692,psi2:0	C1_7,C2_0	C1_58,C2_0	Yes
ENSG00000260432	RP11-297M9.2	chr16:9851086-9851156	+	deletion	8	Yes	-	lincRNA	no_known_ss	70	9851086	No	No	No	bcc_32326|Cycle_0|Type_1	31,31	9851117,9851126	psi1:0.9,psi2:0	C1_18,C2_0	C1_2,C2_0	-
ENSG00000203705	TATDN3	chr1:212981159-212985623	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):212985593,212981190	31,31	212981190,212985593	No	Yes	No	bcc_32312|Cycle_3|Type_1	31,28	212981190,212985596	psi1:0.9,psi2:0	C1_18,C2_0	C1_2,C2_0	Yes
ENSG00000197430	OPALIN	chr10:98109553-98118681	-	ES_MULTI	69	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,33,36,31	98109583,98111135,98111167,98115012,98115047,98118651	No	Yes	No	bcc_32186|Cycle_4|Type_1	30,31	98109583,98118651	psi1:0.917355371901,psi2:0	C1_111,C2_0	C1_10,C2_0	Yes
ENSG00000197430	OPALIN	chr10:98109553-98118681	-	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,33,31	98109583,98111135,98111167,98118651	No	Yes	No	bcc_32186|Cycle_3|Type_1	30,31	98109583,98118651	psi1:0.827586206897,psi2:0	C1_48,C2_0	C1_10,C2_0	Yes
ENSG00000197430	OPALIN	chr10:98111136-98118680	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,36,30	98111167,98115012,98115047,98118651	No	Yes	No	bcc_32186|Cycle_1|Type_1	31,30	98111167,98118651	psi1:0.707482993197,psi2:0	C1_104,C2_0	C1_43,C2_0	Yes
ENSG00000164176	EDIL3	chr5:83476309-83549932	-	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,30,31	83476339,83525673,83525702,83549902	No	No	No	bcc_31918|Cycle_0|Type_1	30,31	83476339,83549902	psi1:0.955,psi2:0	C1_191,C2_0	C1_9,C2_0	Yes
ENSG00000183077	AFMID	chr17:76201788-76202054	+	altD	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	46,28	76201834,76202027	No	Yes	No	bcc_3143|Cycle_30|Type_1	31,28	76201819,76202027	psi1:0,psi2:0.0980392156863	C1_0,C2_5	C1_0,C2_46	Yes
ENSG00000114771	AADAC	chr3:151532058-151535234	+	altA	51	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):151532088,151535154	30,81	151532088,151535154	No	No	No	bcc_31006|Cycle_0|Type_1	30,30	151532088,151535205	psi1:0,psi2:0.89219330855	C1_0,C2_240	C1_0,C2_29	Yes
ENSG00000116514	RNF19B	chr1:33413936-33415200	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	33413967,33415170	No	No	No	bcc_30356|Cycle_0|Type_1	28,31	33413964,33415170	psi1:0.4,psi2:0	C1_4,C2_0	C1_6,C2_0	Yes
ENSG00000164402	SEPT8	chr5:132087839-132096524	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,31	132087873,132096494	No	No	No	bcc_30304|Cycle_0|Type_1	31,31	132087870,132096494	psi1:0.829787234043,psi2:0	C1_39,C2_0	C1_8,C2_0	Yes
ENSG00000113600	C9	chr5:39285306-39288950	-	altD	96	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):39288825,39285335	29,126	39285335,39288825	No	No	No	bcc_29958|Cycle_0|Type_1	29,30	39285335,39288921	psi1:0,psi2:0.969034608379	C1_0,C2_2660	C1_0,C2_85	Yes
ENSG00000186487	MYT1L	chr2:1921081-1926094	-	altD	6	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,37	1921111,1926058	No	No	No	bcc_29853|Cycle_0|Type_1	30,31	1921111,1926064	psi1:0.192307692308,psi2:0	C1_5,C2_0	C1_21,C2_0	Yes
ENSG00000021852	C8B	chr1:57422553-57425723	-	ES	129	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,129,31	57422583,57425202,57425330,57425693	No	No	No	bcc_29788|Cycle_1|Type_1	30,31	57422583,57425693	psi1:0,psi2:0.204268292683	C1_0,C2_67	C1_0,C2_261	Yes
ENSG00000145362	ANK2	chr4:114294575-114302639	+	ES	183	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,183,27	114294605,114295920,114296102,114302613	No	Yes	No	bcc_29784|Cycle_16|Type_1	30,27	114294605,114302613	psi1:0.368421052632,psi2:0	C1_77,C2_0	C1_132,C2_0	Yes
ENSG00000145362	ANK2	chr4:114290931-114294274	+	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,93,29	114290961,114293689,114293781,114294246	No	No	No	bcc_29783|Cycle_0|Type_1	30,29	114290961,114294246	psi1:0.325,psi2:0	C1_39,C2_0	C1_81,C2_0	Yes
ENSG00000145362	ANK2	chr4:114239745-114251431	+	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,36,30	114239776,114244915,114244950,114251402	No	No	No	bcc_29770|Cycle_0|Type_1	31,30	114239776,114251402	psi1:0.333333333333,psi2:0	C1_31,C2_0	C1_62,C2_0	Yes
ENSG00000145362	ANK2	chr4:114199062-114203858	+	ES	99	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,99,28	114199091,114199616,114199714,114203831	No	No	No	bcc_29766|Cycle_0|Type_1	29,28	114199091,114203831	psi1:0.842105263158,psi2:0	C1_16,C2_0	C1_3,C2_0	Yes
ENSG00000171735	CAMTA1	chr1:7812562-7826548	+	ES	31	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,31,30	7812593,7815698,7815728,7826519	No	No	No	bcc_29443|Cycle_0|Type_1	31,30	7812593,7826519	psi1:0.652173913043,psi2:0	C1_15,C2_0	C1_8,C2_0	Yes
ENSG00000187957	DNER	chr2:230272032-230312061	-	ES	123	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,123,30	230272061,230282824,230282946,230312032	No	Yes	Yes	bcc_29387|Cycle_5|Type_1	29,30	230272061,230312032	psi1:0.921052631579,psi2:0	C1_70,C2_0	C1_6,C2_0	Yes
ENSG00000177565	TBL1XR1	chr3:176769436-176771591	-	altA	49	Yes	Yes	protein_coding	2_ss_annotated_(over_3_ss):176771561,176769514	78,31	176769514,176771561	No	No	No	bcc_29153|Cycle_0|Type_1	29,31	176769465,176771561	psi1:0.888888888889,psi2:0	C1_16,C2_0	C1_2,C2_0	Yes
ENSG00000236882	C5orf27	chr5:95188387-95192612	+	ES	135	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,135,31	95188418,95188496,95188630,95192582	No	No	No	bcc_29086|Cycle_0|Type_1	31,31	95188418,95192582	psi1:0,psi2:0.592760180995	C1_0,C2_131	C1_0,C2_90	Yes
ENSG00000015592	STMN4	chr8:27098749-27099944	-	ES	81	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,81,31	27098779,27099194,27099274,27099914	No	No	No	bcc_29062|Cycle_0|Type_1	30,31	27098779,27099914	psi1:0.196825396825,psi2:0	C1_62,C2_0	C1_253,C2_0	Yes
ENSG00000015592	STMN4	chr8:27094392-27097516	-	ES	54	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,54,29	27094422,27096743,27096796,27097488	No	No	No	bcc_29061|Cycle_1|Type_1	30,29	27094422,27097488	psi1:0.263157894737,psi2:0	C1_40,C2_0	C1_112,C2_0	Yes
ENSG00000205336	GPR56	chr16:57691373-57693352	+	altA	18	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,46	57691403,57693307	No	No	No	bcc_28971|Cycle_0|Type_1	30,28	57691403,57693325	psi1:0.482142857143,psi2:0	C1_27,C2_0	C1_29,C2_0	Yes
ENSG00000139116	KIF21A	chr12:39705326-39709764	-	ES	12	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,12,31	39705355,39709031,39709042,39709734	No	Yes	No	bcc_28641|Cycle_8|Type_1	29,31	39705355,39709734	psi1:0.421052631579,psi2:0	C1_16,C2_0	C1_22,C2_0	Yes
ENSG00000139116	KIF21A	chr12:39705326-39709764	-	ES	15	No	Yes	protein_coding	3_ss_annotated_(over_4_ss):39705355,39709734,39709031	29,15,31	39705355,39709031,39709045,39709734	No	Yes	No	bcc_28641|Cycle_7|Type_1	29,31	39705355,39709734	psi1:0.435897435897,psi2:0	C1_17,C2_0	C1_22,C2_0	Yes
ENSG00000139116	KIF21A	chr12:39705339-39709764	-	unclassified	3	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):39709042,39705355,39709734,39709031	16,15,31	39705355,39709031,39709045,39709734	No	Yes	No	bcc_28641|Cycle_10|Type_1	16,12,31	39705355,39709031,39709042,39709734	psi1:0.516129032258,psi2:0	C1_16,C2_0	C1_15,C2_0	Yes
ENSG00000134769	DTNA	chr18:32428317-32431828	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):32428347,32431795	30,34	32428347,32431795	No	No	No	bcc_28581|Cycle_0|Type_1	30,31	32428347,32431798	psi1:0.905882352941,psi2:0	C1_77,C2_0	C1_8,C2_0	Yes
ENSG00000134769	DTNA	chr18:32400848-32407587	+	ES	9	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,9,31	32400879,32405231,32405239,32407557	No	No	No	bcc_28579|Cycle_0|Type_1	31,31	32400879,32407557	psi1:0.139534883721,psi2:0	C1_12,C2_0	C1_74,C2_0	Yes
ENSG00000134769	DTNA	chr18:32398376-32398571	+	IR	135	No	-	protein_coding	no_known_ss	195	-	No	No	No	bcc_28578|Cycle_0|Type_1	31,29	32398407,32398543	psi1:0.974358974359,psi2:0	C1_152,C2_0	C1_4,C2_0	Yes
ENSG00000166278,ENSG00000244255	C2,CFB	chr6:31895913-31901417	+	ES	186	No	Yes	protein_coding,protein_coding	all_splice_sites_known_(4_ss)	28,186,31	31895941,31896509,31896694,31901387	No	No	No	bcc_28432|Cycle_0|Type_1	28,31	31895941,31901387	psi1:0,psi2:0.940092165899	C1_0,C2_204	C1_0,C2_13	Yes
ENSG00000235200	RP4-763G1.2	chr1:67995403-67997818	+	ES	64	Yes	-	lincRNA	all_splice_sites_known_(4_ss)	29,64,30	67995432,67995998,67996061,67997789	No	No	No	bcc_28342|Cycle_4|Type_1	29,30	67995432,67997789	psi1:0,psi2:0.821428571429	C1_0,C2_23	C1_0,C2_5	Yes
ENSG00000155666	KDM8	chr16:27226062-27226227	+	IR	103	Yes	Yes	protein_coding	no_known_ss	165	-	No	No	No	bcc_28305|Cycle_1|Type_1	31,31	27226093,27226197	psi1:0,psi2:0.863636363636	C1_0,C2_57	C1_0,C2_9	Yes
ENSG00000150995	ITPR1	chr3:4767234-4768838	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):4767265,4768810	31,32	4767265,4768807	No	No	No	bcc_28134|Cycle_0|Type_1	31,29	4767265,4768810	psi1:0.357142857143,psi2:0	C1_5,C2_0	C1_9,C2_0	Yes
ENSG00000197408	CYP2B6	chr19:41518360-41522580	+	ES	58	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):41522551,41518390	30,58,30	41518390,41518878,41518935,41522551	No	Yes	No	bcc_28122|Cycle_2|Type_1	30,30	41518390,41522551	psi1:0,psi2:0.56862745098	C1_0,C2_29	C1_0,C2_22	(GT:41518390,AG:41522551);(GT:41518390,AG:41518878);(GC:41518935,AG:41522551)
ENSG00000197408	CYP2B6	chr19:41510320-41515153	+	ES	161	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,161,30	41510351,41512810,41512970,41515124	No	Yes	No	bcc_28120|Cycle_1|Type_1	31,30	41510351,41515124	psi1:0,psi2:0.965576592083	C1_0,C2_561	C1_0,C2_20	Yes
ENSG00000054690	PLEKHH1	chr14:68052784-68053819	+	ES	140	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,140,29	68052814,68053527,68053666,68053791	No	Yes	Yes	bcc_27956|Cycle_7|Type_1	30,29	68052814,68053791	psi1:0.365079365079,psi2:0	C1_23,C2_0	C1_40,C2_0	Yes
ENSG00000257017	HP	chr16:72094351-72094412	-	deletion	3	No	Yes	protein_coding	no_known_ss	61	72094351	No	No	No	bcc_27184|Cycle_0|Type_1	28,30	72094379,72094383	psi1:0,psi2:0.950819672131	C1_0,C2_58	C1_0,C2_3	-
ENSG00000132855	ANGPTL3	chr1:63069876-63070332	+	IR	397	Yes	Yes	protein_coding	no_known_ss	456	-	No	No	No	bcc_27126|Cycle_0|Type_1	30,29	63069906,63070304	psi1:0,psi2:0.543973941368	C1_0,C2_334	C1_0,C2_280	Yes
ENSG00000169862	CTNND2	chr5:11082929-11098717	-	ES	75	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,75,31	11082958,11083993,11084067,11098687	No	No	No	bcc_26766|Cycle_4|Type_1	29,31	11082958,11098687	psi1:0.436363636364,psi2:0	C1_48,C2_0	C1_62,C2_0	Yes
ENSG00000013297	CLDN11	chr3:170185153-170194587	+	altD	6	No	-	protein_coding	2_ss_annotated_(over_3_ss):170185184,170194559	37,29	170185190,170194559	No	No	No	bcc_26638|Cycle_0|Type_1	31,29	170185184,170194559	psi1:0.454545454545,psi2:0	C1_5,C2_0	C1_6,C2_0	Yes
ENSG00000141505	ASGR1	chr17:7080364-7081843	-	ES	117	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,117,31	7080395,7080529,7080645,7081813	No	No	No	bcc_26518|Cycle_0|Type_1	31,31	7080395,7081813	psi1:0,psi2:0.880733944954	C1_0,C2_480	C1_0,C2_65	Yes
ENSG00000111642	CHD4	chr12:6692511-6696578	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	33,29	6692544,6696550	No	No	No	bcc_26055|Cycle_3|Type_1	30,29	6692541,6696550	psi1:0.944444444444,psi2:0.944444444444	C1_51,C2_17	C1_3,C2_1	Yes
ENSG00000166313	APBB1	chr11:6422889-6423342	-	ES	6	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,6,31	6422918,6423207,6423212,6423312	No	No	No	bcc_26045|Cycle_0|Type_1	29,31	6422918,6423312	psi1:0.636363636364,psi2:0	C1_91,C2_0	C1_52,C2_0	Yes
ENSG00000102967	DHODH	chr16:72049368-72049612	+	IR	185	Yes	-	protein_coding	no_known_ss	244	-	No	No	No	bcc_25941|Cycle_0|Type_1	29,30	72049397,72049583	psi1:0,psi2:0.960784313725	C1_0,C2_49	C1_0,C2_2	Yes
ENSG00000162374	ELAVL4	chr1:50661428-50666551	+	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,39,29	50661458,50663101,50663139,50666523	No	No	No	bcc_25880|Cycle_0|Type_1	30,29	50661458,50666523	psi1:0.916666666667,psi2:0	C1_22,C2_0	C1_2,C2_0	Yes
ENSG00000008517	IL32	chr16:3115464-3115811	+	ES	46	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	31,46,30	3115495,3115643,3115688,3115782	No	Yes	No	bcc_25856|Cycle_1|Type_1	31,30	3115495,3115782	psi1:0,psi2:0.2	C1_0,C2_5	C1_0,C2_20	Yes
ENSG00000008517	IL32	chr16:3115464-3115812	+	ES	43	Yes	-	protein_coding	all_splice_sites_known_(5_ss)	31,46,28	3115495,3115643,3115688,3115785	No	Yes	No	bcc_25856|Cycle_0|Type_1	31,31	3115495,3115782	psi1:0,psi2:0.459459459459	C1_0,C2_17	C1_0,C2_20	Yes
ENSG00000163531	NFASC	chr1:204957919-204970327	+	ES	237	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	15,15,237,30	204957934,204960420,204960434,204966298,204966534,204970298	No	Yes	No	bcc_25829|Cycle_4|Type_1	15,15,30	204957934,204960420,204960434,204970298	psi1:0.866666666667,psi2:0	C1_13,C2_0	C1_2,C2_0	Yes
ENSG00000163531	NFASC	chr1:204957905-204978713	+	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,15,29	204957934,204960420,204960434,204978685	No	Yes	No	bcc_25829|Cycle_2|Type_1	29,29	204957934,204978685	psi1:0.785714285714,psi2:0	C1_11,C2_0	C1_3,C2_0	Yes
ENSG00000117115	PADI2	chr1:17413163-17418933	-	ES	66	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):17413194,17418903	31,66,31	17413194,17414742,17414807,17418903	No	No	No	bcc_2567|Cycle_0|Type_1	31,31	17413194,17418903	psi1:0.109756097561,psi2:0	C1_9,C2_0	C1_73,C2_0	(GC:17414742,CT:17413194);(AC:17418903,CT:17414807);(AC:17418903,CT:17413194)
ENSG00000186288	PABPC1L2A	chrX:72297954-72298196	-	IR	182	Yes	-	protein_coding	no_known_ss	242	-	No	No	No	bcc_25556|Cycle_0|Type_1	30,30	72297984,72298167	psi1:0.928571428571,psi2:0	C1_26,C2_0	C1_2,C2_0	Yes
ENSG00000067715	SYT1	chr12:79679721-79685825	+	altA	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	30,38	79679751,79685788	No	No	No	bcc_25554|Cycle_0|Type_1	30,29	79679751,79685797	psi1:0.651340996169,psi2:0	C1_340,C2_0	C1_182,C2_0	Yes
ENSG00000078018	MAP2	chr2:210545520-210557389	+	altA	12	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,41	210545551,210557349	No	Yes	No	bcc_25521|Cycle_7|Type_1	31,29	210545551,210557361	psi1:0.689655172414,psi2:0	C1_20,C2_0	C1_9,C2_0	Yes
ENSG00000078018	MAP2	chr2:210561441-210561672	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):210561472,210561641	31,32	210561472,210561641	No	Yes	No	bcc_25521|Cycle_4|Type_1	31,29	210561472,210561644	psi1:0.957142857143,psi2:0	C1_67,C2_0	C1_3,C2_0	Yes
ENSG00000078018	MAP2	chr2:210543379-210545505	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):210543409,210545474	30,32	210543409,210545474	No	No	No	bcc_25520|Cycle_0|Type_1	30,29	210543409,210545477	psi1:0.859649122807,psi2:0	C1_49,C2_0	C1_8,C2_0	Yes
ENSG00000116833	NR5A2	chr1:200145223-200145284	-	deletion	3	No	-	protein_coding	no_known_ss	61	200145223	No	No	No	bcc_253|Cycle_0|Type_1	27,31	200145250,200145254	psi1:0,psi2:0.863636363636	C1_0,C2_19	C1_0,C2_3	-
ENSG00000144481	TRPM8	chr2:234916716-234925970	+	ES	93	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,93,28	234916747,234923206,234923298,234925943	No	No	No	bcc_25372|Cycle_0|Type_1	31,28	234916747,234925943	psi1:0,psi2:0.92523364486	C1_0,C2_99	C1_0,C2_8	Yes
ENSG00000184226	PCDH9	chr13:67205514-67799566	-	ES	102	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,102,30	67205543,67477636,67477737,67799537	No	Yes	No	bcc_25342|Cycle_4|Type_1	29,30	67205543,67799537	psi1:0.772727272727,psi2:0	C1_17,C2_0	C1_5,C2_0	Yes
ENSG00000184226	PCDH9	chr13:67205389-67799567	-	altA	126	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):67799537,67205543	154,31	67205543,67799537	No	Yes	No	bcc_25342|Cycle_1|Type_1	28,31	67205417,67799537	psi1:0.794117647059,psi2:0	C1_27,C2_0	C1_7,C2_0	Yes
ENSG00000184226	PCDH9	chr13:67205389-67799567	-	ES_altA	228	No	Yes	protein_coding	4_ss_annotated_(over_5_ss):67477737,67799537,67477636,67205543	154,102,31	67205543,67477636,67477737,67799537	No	Yes	No	bcc_25342|Cycle_0|Type_1	28,31	67205417,67799537	psi1:0.840909090909,psi2:0	C1_37,C2_0	C1_7,C2_0	Yes
ENSG00000187764	SEMA4D	chr9:92020584-92070831	-	ES	63	No	-	protein_coding	all_splice_sites_known_(4_ss)	30,63,29	92020614,92032971,92033033,92070803	No	No	No	bcc_24664|Cycle_4|Type_1	30,29	92020614,92070803	psi1:0.86,psi2:0	C1_43,C2_0	C1_7,C2_0	Yes
ENSG00000054523	KIF1B	chr1:10338155-10342410	+	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,42,31	10338186,10339155,10339196,10342380	No	Yes	No	bcc_24640|Cycle_2|Type_1	31,31	10338186,10342380	psi1:0.629032258065,psi2:0	C1_39,C2_0	C1_23,C2_0	Yes
ENSG00000054523	KIF1B	chr1:10338155-10342488	+	ES_altA	120	No	Yes	protein_coding	all_splice_sites_known_(5_ss)	31,42,109	10338186,10339155,10339196,10342380	No	Yes	No	bcc_24640|Cycle_1|Type_1	31,31	10338186,10342458	psi1:0.822580645161,psi2:0	C1_51,C2_0	C1_11,C2_0	Yes
ENSG00000054523	KIF1B	chr1:10338155-10342488	+	altA	78	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,109	10338186,10342380	No	Yes	No	bcc_24640|Cycle_0|Type_1	31,31	10338186,10342458	psi1:0.80701754386,psi2:0	C1_46,C2_0	C1_11,C2_0	Yes
ENSG00000131095	GFAP	chr17:42987599-42988012	+	IR	354	No	Yes	protein_coding	no_known_ss	413	-	No	No	No	bcc_2456|Cycle_0|Type_1	29,30	42987628,42987983	psi1:0.606837606838,psi2:0	C1_71,C2_0	C1_46,C2_0	(CT:42987628,AC:42987983)
ENSG00000112245	PTP4A1	chr6:64237958-64286369	+	ES	194	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):64237989,64286341	31,194,29	64237989,64242242,64242435,64286341	No	Yes	No	bcc_24293|Cycle_5|Type_1	31,29	64237989,64286341	psi1:0,psi2:0.777777777778	C1_0,C2_21	C1_0,C2_6	Yes
ENSG00000112245	PTP4A1	chr6:64237958-64286370	+	ES	194	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):64286341,64237989	31,194,30	64237989,64260205,64260398,64286341	No	Yes	No	bcc_24293|Cycle_2|Type_1	31,30	64237989,64286341	psi1:0,psi2:0.892857142857	C1_0,C2_50	C1_0,C2_6	Yes
ENSG00000147872	PLIN2	chr9:19131239-19149134	-	altD	10	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):19149108,19131269	30,37	19131269,19149098	No	No	No	bcc_24107|Cycle_0|Type_1	30,27	19131269,19149108	psi1:0,psi2:0.45	C1_0,C2_9	C1_0,C2_11	Yes
ENSG00000091129	NRCAM	chr7:107800908-107816904	-	ES_MULTI	189	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,153,36,30	107800937,107807366,107807518,107815767,107815802,107816875	No	Yes	No	bcc_23892|Cycle_9|Type_1	29,30	107800937,107816875	psi1:0.408333333333,psi2:0	C1_49,C2_0	C1_71,C2_0	Yes
ENSG00000091129	NRCAM	chr7:107800908-107815797	-	ES	153	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,153,31	107800937,107807366,107807518,107815767	No	Yes	No	bcc_23892|Cycle_8|Type_1	29,31	107800937,107815767	psi1:0.321428571429,psi2:0	C1_27,C2_0	C1_57,C2_0	Yes
ENSG00000091129	NRCAM	chr7:107800909-107816905	-	ES_altD	45	No	-	protein_coding	4_ss_annotated_(over_5_ss):107800937,107815802,107816875,107815767	28,36,40	107800937,107815767,107815802,107816866	No	Yes	No	bcc_23892|Cycle_6|Type_1	28,31	107800937,107816875	psi1:0.336448598131,psi2:0	C1_36,C2_0	C1_71,C2_0	Yes
ENSG00000091129	NRCAM	chr7:107800908-107816905	-	ES_MULTI	198	No	-	protein_coding	6_ss_annotated_(over_7_ss):107807366,107800937,107816875,107815767,107815802,107807518	29,153,36,40	107800937,107807366,107807518,107815767,107815802,107816866	No	Yes	No	bcc_23892|Cycle_5|Type_1	29,31	107800937,107816875	psi1:0.317307692308,psi2:0	C1_33,C2_0	C1_71,C2_0	Yes
ENSG00000091129	NRCAM	chr7:107815772-107816905	-	altD	9	No	-	protein_coding	2_ss_annotated_(over_3_ss):107815802,107816875	30,40	107815802,107816866	No	Yes	No	bcc_23892|Cycle_3|Type_1	30,31	107815802,107816875	psi1:0.172043010753,psi2:0	C1_16,C2_0	C1_77,C2_0	Yes
ENSG00000091129	NRCAM	chr7:107800907-107816905	-	altD	9	No	-	protein_coding	2_ss_annotated_(over_3_ss):107800937,107816875	30,40	107800937,107816866	No	Yes	No	bcc_23892|Cycle_2|Type_1	30,31	107800937,107816875	psi1:0.154761904762,psi2:0	C1_13,C2_0	C1_71,C2_0	Yes
ENSG00000091129	NRCAM	chr7:107800909-107816904	-	ES	36	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,36,30	107800937,107815767,107815802,107816875	No	Yes	No	bcc_23892|Cycle_17|Type_1	28,30	107800937,107816875	psi1:0.496453900709,psi2:0	C1_70,C2_0	C1_71,C2_0	Yes
ENSG00000091129	NRCAM	chr7:107800907-107816895	-	ES	36	No	-	protein_coding	3_ss_annotated_(over_4_ss):107800937,107815802,107815767	30,36,30	107800937,107815767,107815802,107816866	No	Yes	No	bcc_23892|Cycle_12|Type_1	30,30	107800937,107816866	psi1:0.714285714286,psi2:0	C1_30,C2_0	C1_12,C2_0	Yes
ENSG00000091129	NRCAM	chr7:107800907-107816895	-	ES_MULTI	189	No	-	protein_coding	5_ss_annotated_(over_6_ss):107807366,107800937,107815767,107815802,107807518	30,153,36,30	107800937,107807366,107807518,107815767,107815802,107816866	No	Yes	No	bcc_23892|Cycle_11|Type_1	30,30	107800937,107816866	psi1:0.714285714286,psi2:0	C1_30,C2_0	C1_12,C2_0	Yes
ENSG00000091129	NRCAM	chr7:107830160-107832203	-	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,30,31	107830190,107831698,107831727,107832173	No	No	No	bcc_23890|Cycle_0|Type_1	30,31	107830190,107832173	psi1:0.452380952381,psi2:0	C1_19,C2_0	C1_23,C2_0	Yes
ENSG00000091129	NRCAM	chr7:107864250-107866682	-	ES	57	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,57,31	107864280,107866089,107866145,107866652	No	No	No	bcc_23888|Cycle_0|Type_1	30,31	107864280,107866652	psi1:0.737704918033,psi2:0	C1_45,C2_0	C1_16,C2_0	Yes
ENSG00000091129	NRCAM	chr7:107875101-107880433	-	ES	18	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,18,31	107875132,107878196,107878213,107880403	No	No	No	bcc_23884|Cycle_0|Type_1	31,31	107875132,107880403	psi1:0.540540540541,psi2:0	C1_20,C2_0	C1_17,C2_0	Yes
ENSG00000148541	FAM13C	chr10:61012724-61014138	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	34,31	61012758,61014108	No	No	No	bcc_23867|Cycle_0|Type_1	31,31	61012755,61014108	psi1:0.454545454545,psi2:0	C1_5,C2_0	C1_6,C2_0	Yes
ENSG00000163539	CLASP2	chr3:33614817-33617692	+	ES	24	No	Yes	protein_coding	no_known_ss	24,5,24,31	33614841,33614843,33614847,33615966,33615989,33617662	No	Yes	No	bcc_23693|Cycle_3|Type_1	24,5,31	33614841,33614843,33614847,33617662	psi1:0.85,psi2:0	C1_17,C2_0	C1_3,C2_0	(TG:33615989,CC:33617662);(TG:33614847,CC:33617662);-;(TG:33614847,CC:33615966)
ENSG00000163539	CLASP2	chr3:33614816-33617691	-	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,24,31	33614846,33615965,33615988,33617661	No	Yes	No	bcc_23693|Cycle_0|Type_1	30,31	33614846,33617661	psi1:0.5,psi2:0	C1_29,C2_0	C1_29,C2_0	Yes
ENSG00000149091	DGKZ	chr11:46389266-46389584	+	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,33	46389297,46389552	No	No	No	bcc_23347|Cycle_0|Type_1	31,30	46389297,46389555	psi1:0.52380952381,psi2:0	C1_33,C2_0	C1_30,C2_0	Yes
ENSG00000204580	DDR1	chr6:30862418-30864427	+	ES	111	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,111,30	30862448,30863181,30863291,30864398	No	No	No	bcc_23329|Cycle_0|Type_1	30,30	30862448,30864398	psi1:0.653846153846,psi2:0	C1_17,C2_0	C1_9,C2_0	Yes
ENSG00000186910	SERPINA11	chr14:94914566-94919095	-	altA	517	Yes	-	protein_coding	2_ss_annotated_(over_3_ss):94915114,94919066	548,30	94915114,94919066	No	No	No	bcc_23097|Cycle_0|Type_1	31,30	94914597,94919066	psi1:0,psi2:0.982062780269	C1_0,C2_657	C1_0,C2_12	Yes
ENSG00000100031	GGT1	chr22:25005969-25006352	+	altA	108	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,136	25006000,25006217	No	Yes	No	bcc_22619|Cycle_3|Type_1	31,28	25006000,25006325	psi1:0,psi2:0.68	C1_0,C2_17	C1_0,C2_8	Yes
ENSG00000188488	SERPINA5	chr14:95047796-95053713	+	ES	96	No	-	protein_coding	all_splice_sites_known_(4_ss)	31,96,31	95047827,95047952,95048047,95053683	No	No	No	bcc_22436|Cycle_0|Type_1	31,31	95047827,95053683	psi1:0,psi2:0.814814814815	C1_0,C2_66	C1_0,C2_15	Yes
ENSG00000055955	ITIH4	chr3:52853505-52854650	-	ES_MULTI	90	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	29,39,51,27,4	52853534,52853770,52853808,52853956,52854006,52854307,52854333,52854647	No	Yes	No	bcc_22412|Cycle_8|Type_1	29,27,4	52853534,52854307,52854333,52854647	psi1:0,psi2:0.759457530335	C1_0,C2_2128	C1_0,C2_674	Yes
ENSG00000055955	ITIH4	chr3:52853505-52854650	-	ES	237	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	29,237,27,4	52853534,52853770,52854006,52854307,52854333,52854647	No	Yes	No	bcc_22412|Cycle_7|Type_1	29,27,4	52853534,52854307,52854333,52854647	psi1:0,psi2:0.721832439125	C1_0,C2_1749	C1_0,C2_674	Yes
ENSG00000055955	ITIH4	chr3:52853505-52854650	-	ES_MULTI	105	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	29,54,51,27,4	52853534,52853770,52853823,52853956,52854006,52854307,52854333,52854647	No	Yes	No	bcc_22412|Cycle_6|Type_1	29,27,4	52853534,52854307,52854333,52854647	psi1:0,psi2:0.701769911504	C1_0,C2_1586	C1_0,C2_674	Yes
ENSG00000055955	ITIH4	chr3:52853780-52853986	+	IR	147	No	Yes	protein_coding	no_known_ss	206	-	No	Yes	No	bcc_22412|Cycle_2|Type_1	28,31	52853808,52853956	psi1:0,psi2:0.28843537415	C1_0,C2_424	C1_0,C2_1046	(CT:52853808,AC:52853956)
ENSG00000055955	ITIH4	chr3:52853780-52853986	-	altA	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	43,31	52853823,52853956	No	Yes	No	bcc_22412|Cycle_1|Type_1	28,31	52853808,52853956	psi1:0,psi2:0.202743902439	C1_0,C2_266	C1_0,C2_1046	Yes
ENSG00000055955	ITIH4	chr3:52853795-52853985	-	IR	132	No	Yes	protein_coding	no_known_ss	190	-	No	Yes	No	bcc_22412|Cycle_0|Type_1	28,30	52853823,52853956	psi1:0,psi2:0.645655877342	C1_0,C2_379	C1_0,C2_208	Yes
ENSG00000055955	ITIH4	chr3:52852554-52853437	-	altA	158	Yes	Yes	protein_coding	1_ss_annotated_(over_3_ss):52853409	189,29	52852743,52853409	No	Yes	No	bcc_22408|Cycle_17|Type_1	31,29	52852585,52853409	psi1:0,psi2:0.908396946565	C1_0,C2_119	C1_0,C2_12	(AC:52853409,CT:52852743);(AC:52853409,CA:52852585)
ENSG00000117601	SERPINC1	chr1:173884028-173886387	-	ES	169	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,169,31	173884057,173884156,173884324,173886357	No	No	No	bcc_22039|Cycle_0|Type_1	29,31	173884057,173886357	psi1:0,psi2:0.138613861386	C1_0,C2_98	C1_0,C2_609	Yes
ENSG00000021645	NRXN3	chr14:80327813-80328559	+	IR	687	No	Yes	protein_coding	no_known_ss	746	-	No	No	No	bcc_21863|Cycle_0|Type_1	28,31	80327841,80328529	psi1:0.985714285714,psi2:0	C1_69,C2_0	C1_1,C2_0	(GT:80327841,CG:80328529)
ENSG00000021645	NRXN3	chr14:80130263-80164001	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,90,29	80130292,80158516,80158605,80163973	No	No	No	bcc_21862|Cycle_0|Type_1	29,29	80130292,80163973	psi1:0.647058823529,psi2:0	C1_11,C2_0	C1_6,C2_0	Yes
ENSG00000169174	PCSK9	chr1:55521706-55523019	+	IR	111	No	Yes	protein_coding	2_ss_annotated_(over_4_ss):55523004,55521862	156,16	-	No	No	No	bcc_2176|Cycle_0|Type_1	31,14,16	55521737,55521849,55521862,55523004	psi1:0,psi2:0.882352941176	C1_0,C2_15	C1_0,C2_2	Yes
ENSG00000088387	DOCK9	chr13:99460899-99461636	-	ES	6	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,6,31	99460929,99461377,99461382,99461606	No	Yes	No	bcc_20973|Cycle_0|Type_1	30,31	99460929,99461606	psi1:0.416666666667,psi2:0	C1_5,C2_0	C1_7,C2_0	Yes
ENSG00000138834	MAPK8IP3	chr16:1798702-1809988	+	ES	18	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	19,12,18,30	1798721,1808149,1808160,1808979,1808996,1809959	No	No	No	bcc_20569|Cycle_0|Type_1	19,12,30	1798721,1808149,1808160,1809959	psi1:0.675,psi2:0	C1_27,C2_0	C1_13,C2_0	Yes
ENSG00000138834	MAPK8IP3	chr16:1779548-1793364	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,32	1779579,1793333	No	No	No	bcc_20567|Cycle_0|Type_1	31,29	1779579,1793336	psi1:0.238095238095,psi2:0	C1_5,C2_0	C1_16,C2_0	Yes
ENSG00000106258	CYP3A5	chr7:99270272-99272186	-	altA	236	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	266,31	99270538,99272156	No	Yes	No	bcc_19960|Cycle_4|Type_1	30,31	99270302,99272156	psi1:0,psi2:0.858407079646	C1_0,C2_97	C1_0,C2_16	Yes
ENSG00000106258	CYP3A5	chr7:99270272-99270437	-	IR	104	Yes	-	protein_coding	no_known_ss	165	-	No	Yes	No	bcc_19960|Cycle_2|Type_1	30,31	99270302,99270407	psi1:0,psi2:0.626506024096	C1_0,C2_52	C1_0,C2_31	Yes
ENSG00000106258	CYP3A5	chr7:99270274-99272186	-	ES	132	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	28,132,31	99270302,99270407,99270538,99272156	No	Yes	No	bcc_19960|Cycle_0|Type_1	28,31	99270302,99272156	psi1:0,psi2:0.829787234043	C1_0,C2_78	C1_0,C2_16	Yes
ENSG00000103034	NDRG4	chr16:58543226-58545356	+	ES	39	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,39,31	58543256,58544549,58544587,58545326	No	No	No	bcc_19938|Cycle_0|Type_1	30,31	58543256,58545326	psi1:0.242857142857,psi2:0	C1_17,C2_0	C1_53,C2_0	Yes
ENSG00000103034	NDRG4	chr16:58534143-58537731	+	ES	90	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,90,30	58534173,58534892,58534981,58537702	No	No	No	bcc_19936|Cycle_0|Type_1	30,30	58534173,58537702	psi1:0.464285714286,psi2:0	C1_13,C2_0	C1_15,C2_0	Yes
ENSG00000137204	SLC22A7	chr6:43266053-43266387	+	IR	274	Yes	Yes	protein_coding	no_known_ss	334	-	No	No	No	bcc_19823|Cycle_0|Type_1	30,30	43266083,43266358	psi1:0,psi2:0.929577464789	C1_0,C2_66	C1_0,C2_5	Yes
ENSG00000133816	MICAL2	chr11:12265628-12277218	+	ES	63	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,63,29	12265659,12270731,12270793,12277190	No	Yes	No	bcc_19733|Cycle_8|Type_1	31,29	12265659,12277190	psi1:0.666666666667,psi2:0	C1_40,C2_0	C1_20,C2_0	Yes
ENSG00000154146	NRGN	chr11:124615596-124616310	+	unclassified	3	No	-	protein_coding	all_splice_sites_known_(5_ss)	29,21,11	124615625,124615858,124615878,124616300	No	No	No	bcc_18800|Cycle_0|Type_1	29,18,11	124615625,124615861,124615878,124616300	psi1:0.395393474088,psi2:0	C1_206,C2_0	C1_315,C2_0	Yes
ENSG00000128487	SPECC1	chr17:20135687-20150562	+	ES	146	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,146,31	20135718,20149239,20149384,20150532	No	No	No	bcc_18458|Cycle_0|Type_1	31,31	20135718,20150532	psi1:0.921052631579,psi2:0	C1_35,C2_0	C1_3,C2_0	Yes
ENSG00000135426	TESPA1	chr12:55344143-55354981	-	ES	54	No	-	protein_coding	2_ss_annotated_(over_4_ss):55354952,55344174	31,54,30	55344174,55350538,55350591,55354952	No	No	No	bcc_18420|Cycle_0|Type_1	31,30	55344174,55354952	psi1:0.64367816092,psi2:0	C1_56,C2_0	C1_31,C2_0	Yes
ENSG00000123560	PLP1	chrX:103041519-103042756	+	altD	105	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	136,30	103041655,103042727	No	No	No	bcc_18021|Cycle_0|Type_1	31,30	103041550,103042727	psi1:0.94103531025,psi2:0	C1_2745,C2_0	C1_172,C2_0	Yes
ENSG00000160469	BRSK1	chr19:55815164-55815948	+	ES	61	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,61,30	55815194,55815418,55815478,55815919	No	No	No	bcc_17935|Cycle_0|Type_1	30,30	55815194,55815919	psi1:0.928571428571,psi2:0	C1_39,C2_0	C1_3,C2_0	Yes
ENSG00000163697	APBB2	chr4:40947059-41015630	-	altA	3	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,31	40947090,41015600	No	No	No	bcc_17615|Cycle_0|Type_1	28,31	40947087,41015600	psi1:0.461538461538,psi2:0	C1_6,C2_0	C1_7,C2_0	Yes
ENSG00000242808	SOX2-OT	chr3:181417640-181457387	+	ES	108	No	-	sense_overlapping	all_splice_sites_known_(4_ss)	31,108,31	181417671,181432973,181433080,181457357	No	No	No	bcc_17361|Cycle_0|Type_1	31,31	181417671,181457357	psi1:0.648114901257,psi2:0	C1_361,C2_0	C1_196,C2_0	Yes
ENSG00000140093	SERPINA10	chr14:94754867-94756242	+	IR	1316	Yes	Yes	protein_coding	no_known_ss	1375	-	No	No	No	bcc_17285|Cycle_0|Type_1	29,30	94754896,94756213	psi1:0,psi2:0.620736698499	C1_0,C2_455	C1_0,C2_278	(CT:94754896,AC:94756213)
ENSG00000138758	SEPT11	chr4:77952092-77960926	+	ES	68	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,68,31	77952123,77957923,77957990,77960896	No	Yes	No	bcc_17063|Cycle_8|Type_1	31,31	77952123,77960896	psi1:0.933333333333,psi2:0	C1_28,C2_0	C1_2,C2_0	Yes
ENSG00000148584	A1CF	chr10:52573769-52575796	-	altA	24	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	53,31	52573822,52575766	No	No	No	bcc_1682|Cycle_0|Type_1	29,31	52573798,52575766	psi1:0,psi2:0.487804878049	C1_0,C2_20	C1_0,C2_21	Yes
ENSG00000148584	A1CF	chr10:52580383-52595863	-	ES	165	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	26,165,30	52580409,52587891,52588055,52595834	No	No	No	bcc_1681|Cycle_0|Type_1	26,30	52580409,52595834	psi1:0,psi2:0.951612903226	C1_0,C2_59	C1_0,C2_3	Yes
ENSG00000186301	MST1P2	chr1:16973367-16973505	+	IR	78	No	-	pseudogene	no_known_ss	138	-	No	Yes	No	bcc_16655|Cycle_9|Type_1	29,31	16973396,16973475	psi1:0,psi2:0.625	C1_0,C2_10	C1_0,C2_6	Yes
ENSG00000186301	MST1P2	chr1:16974045-16974593	+	ES	169	Yes	-	pseudogene	all_splice_sites_known_(4_ss)	31,169,31	16974076,16974279,16974447,16974563	No	Yes	No	bcc_16649|Cycle_9|Type_1	31,31	16974076,16974563	psi1:0,psi2:0.979865771812	C1_0,C2_146	C1_0,C2_3	Yes
ENSG00000186301	MST1P2	chr1:16974416-16974593	+	IR	115	Yes	-	pseudogene	no_known_ss	177	-	No	Yes	No	bcc_16649|Cycle_6|Type_1	31,31	16974447,16974563	psi1:0,psi2:0.359375	C1_0,C2_23	C1_0,C2_41	Yes
ENSG00000186301	MST1P2	chr1:16974045-16974592	+	altA	284	Yes	-	pseudogene	all_splice_sites_known_(3_ss)	31,314	16974076,16974279	No	Yes	No	bcc_16649|Cycle_10|Type_1	31,30	16974076,16974563	psi1:0,psi2:0.977611940299	C1_0,C2_131	C1_0,C2_3	Yes
ENSG00000186301	MST1P2	chr1:16975466-16975698	-	IR	172	Yes	-	pseudogene	no_known_ss	232	-	No	Yes	No	bcc_16644|Cycle_37|Type_1	30,30	16975496,16975669	psi1:0,psi2:0.75	C1_0,C2_51	C1_0,C2_17	(AG:16975669,GT:16975496)
ENSG00000173531	MST1	chr3:49722358-49722722	-	altA	134	Yes	Yes	protein_coding	all_splice_sites_known_(3_ss)	164,28	49722522,49722695	No	Yes	Yes	bcc_16644|Cycle_19|Type_1	30,28	49722388,49722695	psi1:0,psi2:0.915254237288	C1_0,C2_54	C1_0,C2_5	Yes
ENSG00000173531	MST1	chr3:49721800-49722068	-	altAD	112	Yes	Yes	protein_coding	2_ss_annotated_(over_4_ss):49721886,49721983	86,86	49721886,49721983	No	Yes	Yes	bcc_16642|Cycle_13|Type_1	30,30	49721830,49722039	psi1:0,psi2:0.931279620853	C1_0,C2_393	C1_0,C2_29	Yes
ENSG00000008128,ENSG00000268575	CDK11A,RP1-283E3.8	chr1:1641051-1647815	-	ES	137	Yes	Yes	protein_coding,processed_transcript	all_splice_sites_known_(4_ss)	28,137,31	1641079,1643703,1643839,1647785	No	No	No	bcc_16625|Cycle_1|Type_1	28,31	1641079,1647785	psi1:0.923076923077,psi2:0.923076923077	C1_36,C2_12	C1_3,C2_1	Yes
ENSG00000104177	MYEF2	chr15:48444109-48446018	-	ES	51	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,51,30	48444139,48444431,48444481,48445989	No	No	No	bcc_16419|Cycle_0|Type_1	30,30	48444139,48445989	psi1:0.62962962963,psi2:0	C1_34,C2_0	C1_20,C2_0	Yes
ENSG00000104177	MYEF2	chr15:48441537-48443698	-	ES	72	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,72,29	48441568,48443297,48443368,48443670	No	No	No	bcc_16418|Cycle_0|Type_1	31,29	48441568,48443670	psi1:0.52808988764,psi2:0	C1_47,C2_0	C1_42,C2_0	Yes
ENSG00000110675	ELMOD1	chr11:107521098-107524926	+	ES	24	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,24,29	107521129,107521611,107521634,107524898	No	No	No	bcc_16258|Cycle_0|Type_1	31,29	107521129,107524898	psi1:0.51724137931,psi2:0	C1_30,C2_0	C1_28,C2_0	Yes
ENSG00000149294	NCAM1	chr11:113126692-113130897	+	altA	3	No	-	protein_coding	2_ss_annotated_(over_3_ss):113126723,113130868	31,33	113126723,113130865	No	No	No	bcc_16203|Cycle_0|Type_1	31,30	113126723,113130868	psi1:0.0862068965517,psi2:0	C1_5,C2_0	C1_53,C2_0	Yes
ENSG00000149294	NCAM1	chr11:113105855-113126628	+	ES	15	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,15,30	113105886,113107023,113107037,113126599	No	Yes	No	bcc_16202|Cycle_5|Type_1	31,30	113105886,113126599	psi1:0.0789473684211,psi2:0	C1_3,C2_0	C1_35,C2_0	Yes
ENSG00000149294	NCAM1	chr11:113105855-113126629	+	ES	3	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,3,31	113105886,113117090,113117092,113126599	No	Yes	No	bcc_16202|Cycle_0|Type_1	31,31	113105886,113126599	psi1:0.52,psi2:0	C1_39,C2_0	C1_36,C2_0	Yes
ENSG00000149294	NCAM1	chr11:113085202-113102395	+	ES	30	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,30,29	113085233,113092018,113092047,113102367	No	No	No	bcc_16201|Cycle_0|Type_1	31,29	113085233,113102367	psi1:0.375,psi2:0	C1_27,C2_0	C1_45,C2_0	Yes
ENSG00000186868	MAPT	chr17:44103047-44103243	+	IR	139	Yes	-	protein_coding	no_known_ss	196	-	No	No	No	bcc_15595|Cycle_0|Type_1	26,31	44103073,44103213	psi1:0.971428571429,psi2:0	C1_68,C2_0	C1_2,C2_0	(AG:44103073,CC:44103213)
ENSG00000186868	MAPT	chr17:44039805-44055768	+	ES	87	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,87,28	44039836,44049225,44049311,44055741	No	No	No	bcc_15591|Cycle_0|Type_1	31,28	44039836,44055741	psi1:0.703703703704,psi2:0	C1_57,C2_0	C1_24,C2_0	Yes
ENSG00000104728	ARHGEF10	chr8:1780996-1781524	+	altAD	16	Yes	-	protein_coding	no_known_ss	43,31	1781039,1781494	Yes	Yes	No	bcc_15588|Cycle_220|Type_1	31,27	1781027,1781498	psi1:0.833333333333,psi2:0	C1_5,C2_0	C1_1,C2_0	(GC:1781027,AG:1781498);(AC:1781039,AC:1781494)
ENSG00000104728	ARHGEF10	chr8:1780868-1781524	+	altAD	16	Yes	-	protein_coding	no_known_ss	43,31	1780911,1781494	Yes	Yes	No	bcc_15588|Cycle_220|Type_1	31,27	1780899,1781498	psi1:0.833333333333,psi2:0	C1_5,C2_0	C1_1,C2_0	(GC:1780899,AG:1781498);(GC:1780911,AC:1781494)
ENSG00000204843	DCTN1	chr2:74598846-74604589	-	ES_MULTI	39	No	Yes	protein_coding	all_splice_sites_known_(8_ss)	9,21,18,21,31	74598855,74600055,74600075,74601450,74601467,74603869,74603889,74604559	No	Yes	No	bcc_15459|Cycle_2|Type_1	9,21,31	74598855,74600055,74600075,74604559	psi1:0.860465116279,psi2:0	C1_37,C2_0	C1_6,C2_0	Yes
ENSG00000111674	ENO2	chr12:7023792-7025012	+	altA	3	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,31	7023823,7024982	No	No	No	bcc_15106|Cycle_0|Type_1	31,28	7023823,7024985	psi1:0.444444444444,psi2:0	C1_4,C2_0	C1_5,C2_0	Yes
ENSG00000066032	CTNNA2	chr2:80831273-80874739	+	ES	135	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,135,30	80831304,80835309,80835443,80874710	No	No	No	bcc_14799|Cycle_0|Type_1	31,30	80831304,80874710	psi1:0.87619047619,psi2:0	C1_184,C2_0	C1_26,C2_0	Yes
ENSG00000164548	TRA2A	chr7:23561428-23561780	-	altD	11	Yes	-	protein_coding	all_splice_sites_known_(3_ss)	31,41	23561459,23561740	No	Yes	No	bcc_14513|Cycle_1|Type_1	31,30	23561459,23561751	psi1:0.363636363636,psi2:0	C1_4,C2_0	C1_7,C2_0	Yes
ENSG00000104760	FGL1	chr8:17749287-17752985	-	altD	222	No	-	protein_coding	all_splice_sites_known_(3_ss)	29,252	17749316,17752734	No	Yes	No	bcc_14364|Cycle_4|Type_1	29,30	17749316,17752956	psi1:0,psi2:0.546987951807	C1_0,C2_227	C1_0,C2_188	(AC:17752734,CT:17749316);(GC:17752956,CT:17749316)
ENSG00000104760	FGL1	chr8:17743051-17752986	-	ES_altD	349	Yes	-	protein_coding	all_splice_sites_known_(5_ss)	29,127,253	17743080,17749190,17749316,17752734	No	Yes	No	bcc_14364|Cycle_1|Type_1	29,31	17743080,17752956	psi1:0,psi2:0.236383442266	C1_0,C2_868	C1_0,C2_2804	(GC:17752956,CT:17743080);(AC:17752734,CT:17749316);(AC:17749190,CT:17743080)
ENSG00000104760	FGL1	chr8:17743051-17752986	-	ES	127	Yes	-	protein_coding	all_splice_sites_known_(4_ss)	29,127,31	17743080,17749190,17749316,17752956	No	Yes	No	bcc_14364|Cycle_0|Type_1	29,31	17743080,17752956	psi1:0,psi2:0.230515916575	C1_0,C2_840	C1_0,C2_2804	(GC:17752956,CT:17743080);(AC:17749190,CT:17743080);(GC:17752956,CT:17749316)
ENSG00000137561	TTPA	chr8:63976846-63985524	-	ES	194	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,194,31	63976875,63978463,63978656,63985494	No	No	No	bcc_14313|Cycle_0|Type_1	29,31	63976875,63985494	psi1:0,psi2:0.965277777778	C1_0,C2_139	C1_0,C2_5	Yes
ENSG00000182916	TCEAL7	chrX:102585201-102585933	+	altA	54	No	-	protein_coding	all_splice_sites_known_(3_ss)	31,83	102585232,102585851	No	No	No	bcc_1330|Cycle_0|Type_1	31,29	102585232,102585905	psi1:0.64,psi2:0	C1_16,C2_0	C1_9,C2_0	Yes
ENSG00000179915	NRXN1	chr2:50149360-50170881	-	altD	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,40	50149389,50170842	No	No	No	bcc_13274|Cycle_1|Type_1	29,31	50149389,50170851	psi1:0.5,psi2:0	C1_6,C2_0	C1_6,C2_0	Yes
ENSG00000198626	RYR2	chr1:237948241-237949302	+	altA	6	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):237948272,237949269	31,34	237948272,237949269	No	No	No	bcc_1320|Cycle_0|Type_1	31,28	237948272,237949275	psi1:0.8,psi2:0	C1_12,C2_0	C1_3,C2_0	Yes
ENSG00000108309	RUNDC3A	chr17:42395276-42395491	-	IR	157	Yes	Yes	protein_coding	no_known_ss	215	-	No	Yes	No	bcc_13026|Cycle_0|Type_1	30,28	42395306,42395464	psi1:0.9375,psi2:0	C1_45,C2_0	C1_3,C2_0	(AG:42395464,GT:42395306)
ENSG00000108309	RUNDC3A	chr17:42390032-42390515	+	altA	15	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,44	42390063,42390472	No	Yes	No	bcc_13019|Cycle_2|Type_1	31,29	42390063,42390487	psi1:0.538461538462,psi2:0	C1_28,C2_0	C1_24,C2_0	Yes
ENSG00000108309	RUNDC3A	chr17:42390032-42390515	+	altA	3	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):42390487,42390063	31,32	42390063,42390484	No	Yes	No	bcc_13019|Cycle_1|Type_1	31,29	42390063,42390487	psi1:0.225806451613,psi2:0	C1_7,C2_0	C1_24,C2_0	Yes
ENSG00000108309	RUNDC3A	chr17:42390033-42390512	+	altA	12	No	Yes	protein_coding	2_ss_annotated_(over_3_ss):42390472,42390063	30,41	42390063,42390472	No	Yes	No	bcc_13019|Cycle_0|Type_1	30,29	42390063,42390484	psi1:0.8125,psi2:0	C1_26,C2_0	C1_6,C2_0	Yes
ENSG00000176401	EID2B	chr19:40022122-40022348	-	IR	164	Yes	-	protein_coding	no_known_ss	226	-	No	No	No	bcc_12843|Cycle_0|Type_1	31,31	40022153,40022318	psi1:0.948717948718,psi2:0	C1_37,C2_0	C1_2,C2_0	Yes
ENSG00000064787	BCAS1	chr20:52583581-52601856	-	ES	42	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,42,31	52583612,52591928,52591969,52601826	No	Yes	No	bcc_12835|Cycle_2|Type_1	31,31	52583612,52601826	psi1:0.727272727273,psi2:0	C1_24,C2_0	C1_9,C2_0	Yes
ENSG00000064787	BCAS1	chr20:52570204-52601856	-	ES_MULTI	210	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	30,168,42,31	52570234,52583445,52583612,52591928,52591969,52601826	No	Yes	No	bcc_12835|Cycle_1|Type_1	30,31	52570234,52601826	psi1:0.407407407407,psi2:0	C1_66,C2_0	C1_96,C2_0	Yes
ENSG00000064787	BCAS1	chr20:52570204-52601856	-	ES	168	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,168,31	52570234,52583445,52583612,52601826	No	Yes	No	bcc_12835|Cycle_0|Type_1	30,31	52570234,52601826	psi1:0.337931034483,psi2:0	C1_49,C2_0	C1_96,C2_0	Yes
ENSG00000046653	GPM6B	chrX:13803898-13834993	-	ES	120	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,120,31	13803927,13825769,13825888,13834963	No	No	No	bcc_11908|Cycle_0|Type_1	29,31	13803927,13834963	psi1:0.450980392157,psi2:0	C1_69,C2_0	C1_84,C2_0	Yes
ENSG00000067141	NEO1	chr15:73470737-73528717	+	altA	60	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	31,90	73470768,73528628	No	No	No	bcc_1189|Cycle_0|Type_1	31,30	73470768,73528688	psi1:0.470588235294,psi2:0	C1_8,C2_0	C1_9,C2_0	Yes
ENSG00000087470	DNM1L	chr12:32890845-32893028	+	ES	33	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,33,31	32890876,32891198,32891230,32892998	No	Yes	No	bcc_11731|Cycle_0|Type_1	31,31	32890876,32892998	psi1:0.730769230769,psi2:0	C1_19,C2_0	C1_7,C2_0	Yes
ENSG00000116882	HAO2	chr1:119927645-119934763	+	ES	210	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,210,31	119927676,119929245,119929454,119934733	No	No	No	bcc_1143|Cycle_0|Type_1	31,31	119927676,119934733	psi1:0,psi2:0.840725806452	C1_0,C2_417	C1_0,C2_79	Yes
ENSG00000116882	HAO2	chr1:119925660-119927502	+	altA	75	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	29,104	119925689,119927399	No	No	No	bcc_1142|Cycle_0|Type_1	29,29	119925689,119927474	psi1:0,psi2:0.921383647799	C1_0,C2_293	C1_0,C2_25	Yes
ENSG00000132535	DLG4	chr17:7107346-7107547	-	altA	9	No	Yes	protein_coding	all_splice_sites_known_(3_ss)	40,30	7107386,7107518	No	No	No	bcc_11079|Cycle_0|Type_1	31,30	7107377,7107518	psi1:0.666666666667,psi2:0	C1_40,C2_0	C1_20,C2_0	(AC:7107518,CT:7107377);(AC:7107518,CA:7107386)
ENSG00000145349	CAMK2D	chr4:114424103-114430824	-	ES	60	No	Yes	protein_coding	all_splice_sites_known_(4_ss)	30,60,31	114424133,114426132,114426191,114430794	No	Yes	No	bcc_10665|Cycle_0|Type_1	30,31	114424133,114430794	psi1:0.95,psi2:0	C1_38,C2_0	C1_2,C2_0	Yes
ENSG00000256528	AP006285.1	chr11:1688025-1689220	-	ES	119	Yes	-	pseudogene	no_known_ss	30,119,28	1688055,1688860,1688978,1689193	No	Yes	No	bcc_10407|Cycle_9|Type_1	30,28	1688055,1689193	psi1:0,psi2:0.72	C1_0,C2_18	C1_0,C2_7	(AG:1689193,GT:1688978);(AG:1689193,GT:1688055);(AG:1688860,GT:1688055)
ENSG00000256528	AP006285.1	chr11:1688024-1689220	+	ES	224	Yes	-	pseudogene	no_known_ss	31,224,28	1688055,1688755,1688978,1689193	No	Yes	No	bcc_10407|Cycle_7|Type_1	31,28	1688055,1689193	psi1:0,psi2:0.89552238806	C1_0,C2_60	C1_0,C2_7	Yes
ENSG00000256528	AP006285.1	chr11:1688024-1689220	+	ES_MULTI	220	Yes	-	pseudogene	no_known_ss	31,149,71,28	1688055,1688755,1688903,1688908,1688978,1689193	No	Yes	No	bcc_10407|Cycle_6|Type_1	31,28	1688055,1689193	psi1:0,psi2:0.898550724638	C1_0,C2_62	C1_0,C2_7	(GT:1688978,AG:1689193);(GT:1688055,AG:1689193);(TG:1688903,GC:1688908);(GT:1688055,AG:1688755)
ENSG00000256528	AP006285.1	chr11:1688947-1689220	+	IR	214	Yes	-	pseudogene	no_known_ss	273	-	No	Yes	No	bcc_10407|Cycle_4|Type_1	31,28	1688978,1689193	psi1:0,psi2:0.863636363636	C1_0,C2_38	C1_0,C2_6	Yes
ENSG00000256528	AP006285.1	chr11:1688025-1689219	-	altD	333	No	-	pseudogene	no_known_ss	30,360	1688055,1688860	No	Yes	No	bcc_10407|Cycle_25|Type_1	30,27	1688055,1689193	psi1:0,psi2:0.877192982456	C1_0,C2_50	C1_0,C2_7	(AG:1689193,GT:1688055);(AG:1688860,GT:1688055)
ENSG00000256528	AP006285.1	chr11:1688025-1689220	-	ES_MULTI	115	Yes	-	pseudogene	no_known_ss	30,44,71,28	1688055,1688860,1688903,1688908,1688978,1689193	No	Yes	No	bcc_10407|Cycle_22|Type_1	30,28	1688055,1689193	psi1:0,psi2:0.766666666667	C1_0,C2_23	C1_0,C2_7	(AG:1689193,GT:1688978);(AG:1689193,GT:1688055);(GC:1688908,TG:1688903);(AG:1688860,GT:1688055)
ENSG00000256528	AP006285.1	chr11:1688024-1688886	+	altA	105	No	-	pseudogene	no_known_ss	31,132	1688055,1688755	No	Yes	No	bcc_10407|Cycle_20|Type_1	31,27	1688055,1688860	psi1:0,psi2:0.83606557377	C1_0,C2_51	C1_0,C2_10	Yes
ENSG00000256528	AP006285.1	chr11:1688024-1689219	+	altA	438	No	-	pseudogene	no_known_ss	31,465	1688055,1688755	No	Yes	No	bcc_10407|Cycle_17|Type_1	31,27	1688055,1689193	psi1:0,psi2:0.929292929293	C1_0,C2_92	C1_0,C2_7	Yes
ENSG00000256528	AP006285.1	chr11:1688024-1689219	+	ES_altA	434	Yes	-	pseudogene	no_known_ss	31,149,312	1688055,1688755,1688903,1688908	No	Yes	No	bcc_10407|Cycle_16|Type_1	31,27	1688055,1689193	psi1:0,psi2:0.930693069307	C1_0,C2_94	C1_0,C2_7	(GT:1688055,AG:1689193);(TG:1688903,GC:1688908);(GT:1688055,AG:1688755)
ENSG00000256528	AP006285.1	chr11:1688025-1689219	-	ES_altD	329	Yes	-	pseudogene	no_known_ss	30,44,312	1688055,1688860,1688903,1688908	No	Yes	No	bcc_10407|Cycle_12|Type_1	30,27	1688055,1689193	psi1:0,psi2:0.887096774194	C1_0,C2_55	C1_0,C2_7	(AG:1689193,GT:1688055);(GC:1688908,TG:1688903);(AG:1688860,GT:1688055)
ENSG00000198099	ADH4	chr4:100063902-100064347	-	ES	28	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	29,28,31	100063931,100064195,100064222,100064317	No	Yes	No	bcc_10280|Cycle_8|Type_1	29,31	100063931,100064317	psi1:0,psi2:0.722222222222	C1_0,C2_13	C1_0,C2_5	Yes
ENSG00000198099	ADH4	chr4:100063900-100065386	-	ES_MULTI	168	No	Yes	protein_coding	all_splice_sites_known_(6_ss)	31,28,140,31	100063931,100064195,100064222,100064317,100064456,100065356	No	Yes	No	bcc_10280|Cycle_5|Type_1	31,31	100063931,100065356	psi1:0,psi2:0.360465116279	C1_0,C2_31	C1_0,C2_55	Yes
ENSG00000198099	ADH4	chr4:100063900-100065386	-	ES	140	Yes	Yes	protein_coding	all_splice_sites_known_(4_ss)	31,140,31	100063931,100064317,100064456,100065356	No	Yes	No	bcc_10280|Cycle_4|Type_1	31,31	100063931,100065356	psi1:0,psi2:0.3125	C1_0,C2_25	C1_0,C2_55	Yes